HEADER TRANSPORT PROTEIN 22-AUG-18 6M98 TITLE CRYSTAL STRUCTURE OF THE HIGH-AFFINITY COPPER TRANSPORTER CTR1 IN TITLE 2 COMPLEX WITH CU(I) COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHIMERA PROTEIN OF HIGH AFFINITY COPPER UPTAKE PROTEIN 1 COMPND 3 AND SOLUBLE CYTOCHROME B562; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: HIGH AFFINITY COPPER UPTAKE PROTEIN 1 ISOFORM X1,CYTOCHROME COMPND 6 B-562,HIGH AFFINITY COPPER UPTAKE PROTEIN 1 ISOFORM X1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMO SALAR, ESCHERICHIA COLI; SOURCE 3 ORGANISM_COMMON: ATLANTIC SALMON; SOURCE 4 ORGANISM_TAXID: 8030, 562; SOURCE 5 GENE: COPT1, COPT1, CYBC; SOURCE 6 EXPRESSION_SYSTEM: KOMAGATAELLA PHAFFII GS115; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 644223 KEYWDS MEMBRANE PROTEINS, ION TRANSPORTERS, ION CHANNELS., TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR F.REN,P.YUAN REVDAT 4 13-MAR-24 6M98 1 LINK REVDAT 3 27-NOV-19 6M98 1 REMARK REVDAT 2 10-APR-19 6M98 1 JRNL REVDAT 1 03-APR-19 6M98 0 JRNL AUTH F.REN,B.L.LOGEMAN,X.ZHANG,Y.LIU,D.J.THIELE,P.YUAN JRNL TITL X-RAY STRUCTURES OF THE HIGH-AFFINITY COPPER TRANSPORTER JRNL TITL 2 CTR1. JRNL REF NAT COMMUN V. 10 1386 2019 JRNL REFN ESSN 2041-1723 JRNL PMID 30918258 JRNL DOI 10.1038/S41467-019-09376-7 REMARK 2 REMARK 2 RESOLUTION. 3.21 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.21 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 79.9 REMARK 3 NUMBER OF REFLECTIONS : 5350 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.304 REMARK 3 R VALUE (WORKING SET) : 0.301 REMARK 3 FREE R VALUE : 0.340 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.800 REMARK 3 FREE R VALUE TEST SET COUNT : 581 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.21 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.29 REMARK 3 REFLECTION IN BIN (WORKING SET) : 33 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 7.30 REMARK 3 BIN R VALUE (WORKING SET) : 0.2470 REMARK 3 BIN FREE R VALUE SET COUNT : 3 REMARK 3 BIN FREE R VALUE : 0.1830 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1560 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 3 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 109.9 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.91000 REMARK 3 B22 (A**2) : -1.91000 REMARK 3 B33 (A**2) : 6.18000 REMARK 3 B12 (A**2) : -0.95000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.657 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.519 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 71.914 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.876 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.847 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1586 ; 0.009 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1483 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2147 ; 1.152 ; 1.957 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3401 ; 0.912 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 199 ; 5.767 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 67 ;36.339 ;24.179 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 256 ;16.377 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ;15.287 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 252 ; 0.055 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1759 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 332 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 811 ; 1.506 ; 7.171 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 810 ; 1.506 ; 7.172 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1005 ; 2.630 ;10.746 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1006 ; 2.628 ;10.746 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 772 ; 1.262 ; 7.255 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 773 ; 1.261 ; 7.254 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1142 ; 2.508 ;10.841 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 1797 ; 4.922 ;85.219 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 1798 ; 4.920 ;85.199 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 41 A 178 REMARK 3 ORIGIN FOR THE GROUP (A): -36.1686 -9.1462 44.5147 REMARK 3 T TENSOR REMARK 3 T11: 0.3820 T22: 0.1865 REMARK 3 T33: 0.0274 T12: 0.0122 REMARK 3 T13: 0.0213 T23: 0.0286 REMARK 3 L TENSOR REMARK 3 L11: 4.4054 L22: 1.8178 REMARK 3 L33: 4.3861 L12: 0.3300 REMARK 3 L13: -2.1448 L23: 0.4044 REMARK 3 S TENSOR REMARK 3 S11: 0.1076 S12: 0.1561 S13: 0.3230 REMARK 3 S21: -0.3537 S22: 0.0906 S23: 0.0646 REMARK 3 S31: -0.8934 S32: 0.0846 S33: -0.1982 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1002 A 1105 REMARK 3 ORIGIN FOR THE GROUP (A): -21.5337 -11.0662 5.3191 REMARK 3 T TENSOR REMARK 3 T11: 0.6626 T22: 0.7113 REMARK 3 T33: 0.4681 T12: -0.0206 REMARK 3 T13: 0.0788 T23: 0.0462 REMARK 3 L TENSOR REMARK 3 L11: 3.5207 L22: 2.0705 REMARK 3 L33: 7.6586 L12: -0.9954 REMARK 3 L13: -1.7843 L23: 0.5909 REMARK 3 S TENSOR REMARK 3 S11: 0.1044 S12: 0.2488 S13: 0.1551 REMARK 3 S21: -0.4671 S22: 0.0289 S23: -0.0173 REMARK 3 S31: -0.5565 S32: -0.4701 S33: -0.1333 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6M98 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-AUG-18. REMARK 100 THE DEPOSITION ID IS D_1000236331. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUL-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.3776 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 7470 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : 0.08300 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 21.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.31 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 6.00 REMARK 200 R MERGE FOR SHELL (I) : 1.17800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 70.92 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM ZINC ACETATE, 50 MM SODIUM REMARK 280 CACODYLATE PH 5.9, AND 28% PEG 400., VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 36.77000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 21.22917 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 136.60667 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 36.77000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 21.22917 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 136.60667 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 36.77000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 21.22917 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 136.60667 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 36.77000 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 21.22917 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 136.60667 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 36.77000 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 21.22917 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 136.60667 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 36.77000 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 21.22917 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 136.60667 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 42.45834 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 273.21333 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 42.45834 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 273.21333 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 42.45834 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 273.21333 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 42.45834 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 273.21333 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 42.45834 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 273.21333 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 42.45834 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 273.21333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5220 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32900 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -180.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 -73.54000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -36.77000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 -63.68751 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CU CU1 A2001 LIES ON A SPECIAL POSITION. REMARK 375 CU CU1 A2002 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1001 REMARK 465 LYS A 1019 REMARK 465 ALA A 1020 REMARK 465 ASP A 1021 REMARK 465 ASN A 1022 REMARK 465 LEU A 1048 REMARK 465 GLU A 1049 REMARK 465 ASP A 1050 REMARK 465 LYS A 1051 REMARK 465 SER A 1052 REMARK 465 PRO A 1053 REMARK 465 ASP A 1054 REMARK 465 LEU A 1106 REMARK 465 VAL A 179 REMARK 465 ASP A 180 REMARK 465 ILE A 181 REMARK 465 THR A 182 REMARK 465 GLU A 183 REMARK 465 HIS A 184 REMARK 465 CYS A 185 REMARK 465 HIS A 186 REMARK 465 SER A 187 REMARK 465 ASN A 188 REMARK 465 SER A 189 REMARK 465 LEU A 190 REMARK 465 GLU A 191 REMARK 465 VAL A 192 REMARK 465 LEU A 193 REMARK 465 PHE A 194 REMARK 465 GLN A 195 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PHE A 45 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 83 CG CD CE NZ REMARK 470 GLU A1004 CG CD OE1 OE2 REMARK 470 LYS A1015 CG CD CE NZ REMARK 470 LYS A1032 CG CD CE NZ REMARK 470 LYS A1059 CG CD CE NZ REMARK 470 ILE A1067 CG1 CG2 CD1 REMARK 470 LEU A1076 CG CD1 CD2 REMARK 470 LYS A1077 CG CD CE NZ REMARK 470 ASN A1080 CG OD1 ND2 REMARK 470 GLU A1092 OE1 OE2 REMARK 470 LYS A1095 CG CD CE NZ REMARK 470 MET A 126 CG SD CE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 43 71.46 60.68 REMARK 500 LEU A 53 -52.63 71.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A2003 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 80 OE1 REMARK 620 2 GLU A 80 OE2 56.1 REMARK 620 3 HIS A 135 NE2 109.2 94.7 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU1 A2001 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 MET A 150 SD REMARK 620 2 MET A 150 SD 0.0 REMARK 620 N 1 DBREF 6M98 A 41 93 UNP C0HAK2 C0HAK2_SALSA 41 93 DBREF 6M98 A 1001 1106 UNP P0ABE7 C562_ECOLX 23 128 DBREF 6M98 A 121 186 UNP C0HAK2 C0HAK2_SALSA 121 186 SEQADV 6M98 TRP A 1007 UNP P0ABE7 MET 29 ENGINEERED MUTATION SEQADV 6M98 ILE A 1102 UNP P0ABE7 HIS 124 ENGINEERED MUTATION SEQADV 6M98 LEU A 1106 UNP P0ABE7 ENGINEERED MUTATION SEQADV 6M98 SER A 187 UNP C0HAK2 EXPRESSION TAG SEQADV 6M98 ASN A 188 UNP C0HAK2 EXPRESSION TAG SEQADV 6M98 SER A 189 UNP C0HAK2 EXPRESSION TAG SEQADV 6M98 LEU A 190 UNP C0HAK2 EXPRESSION TAG SEQADV 6M98 GLU A 191 UNP C0HAK2 EXPRESSION TAG SEQADV 6M98 VAL A 192 UNP C0HAK2 EXPRESSION TAG SEQADV 6M98 LEU A 193 UNP C0HAK2 EXPRESSION TAG SEQADV 6M98 PHE A 194 UNP C0HAK2 EXPRESSION TAG SEQADV 6M98 GLN A 195 UNP C0HAK2 EXPRESSION TAG SEQRES 1 A 234 MET THR PHE TYR PHE GLY TYR THR ASN VAL GLU LEU LEU SEQRES 2 A 234 PHE ALA SER LEU VAL ILE ASN THR PRO GLY GLU MET VAL SEQRES 3 A 234 ALA ALA CYS PHE GLY CYS PHE LEU LEU ALA VAL LEU TYR SEQRES 4 A 234 GLU GLY LEU LYS ILE GLY ARG GLU PHE LEU LEU ARG ARG SEQRES 5 A 234 ASN ALA ASP LEU GLU ASP ASN TRP GLU THR LEU ASN ASP SEQRES 6 A 234 ASN LEU LYS VAL ILE GLU LYS ALA ASP ASN ALA ALA GLN SEQRES 7 A 234 VAL LYS ASP ALA LEU THR LYS MET ARG ALA ALA ALA LEU SEQRES 8 A 234 ASP ALA GLN LYS ALA THR PRO PRO LYS LEU GLU ASP LYS SEQRES 9 A 234 SER PRO ASP SER PRO GLU MET LYS ASP PHE ARG HIS GLY SEQRES 10 A 234 PHE ASP ILE LEU VAL GLY GLN ILE ASP ASP ALA LEU LYS SEQRES 11 A 234 LEU ALA ASN GLU GLY LYS VAL LYS GLU ALA GLN ALA ALA SEQRES 12 A 234 ALA GLU GLN LEU LYS THR THR ARG ASN ALA TYR ILE GLN SEQRES 13 A 234 LYS TYR LEU GLN ARG MET LEU SER MET ALA HIS LEU LEU SEQRES 14 A 234 GLN THR VAL LEU HIS VAL ILE GLN VAL VAL VAL SER TYR SEQRES 15 A 234 PHE LEU MET LEU VAL PHE MET THR TYR ASN ALA TYR LEU SEQRES 16 A 234 CYS MET ALA VAL ALA ALA GLY ALA GLY LEU GLY TYR PHE SEQRES 17 A 234 LEU PHE SER TRP LYS LYS ALA VAL VAL VAL ASP ILE THR SEQRES 18 A 234 GLU HIS CYS HIS SER ASN SER LEU GLU VAL LEU PHE GLN HET CU1 A2001 1 HET CU1 A2002 1 HET ZN A2003 1 HETNAM CU1 COPPER (I) ION HETNAM ZN ZINC ION FORMUL 2 CU1 2(CU 1+) FORMUL 4 ZN ZN 2+ HELIX 1 AA1 THR A 61 ASN A 93 1 33 HELIX 2 AA2 LEU A 1003 GLU A 1018 1 16 HELIX 3 AA3 GLN A 1025 ALA A 1043 1 19 HELIX 4 AA4 PRO A 1056 GLY A 1082 1 27 HELIX 5 AA5 VAL A 1084 TYR A 1101 1 18 HELIX 6 AA6 LYS A 1104 TYR A 1105 5 2 HELIX 7 AA7 GLN A 121 GLN A 121 5 1 HELIX 8 AA8 ARG A 122 THR A 151 1 30 HELIX 9 AA9 ASN A 153 VAL A 178 1 26 SHEET 1 AA1 2 VAL A 50 GLU A 51 0 SHEET 2 AA1 2 VAL A 58 ILE A 59 -1 O ILE A 59 N VAL A 50 LINK OE1 GLU A 80 ZN ZN A2003 1555 1555 2.38 LINK OE2 GLU A 80 ZN ZN A2003 1555 1555 2.20 LINK NE2 HIS A 135 ZN ZN A2003 1555 3445 2.17 LINK SD MET A 150 CU CU1 A2001 1555 1555 2.16 LINK SD MET A 150 CU CU1 A2001 1555 2455 2.16 CRYST1 73.540 73.540 409.820 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013598 0.007851 0.000000 0.00000 SCALE2 0.000000 0.015702 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002440 0.00000