HEADER BIOSYNTHETIC PROTEIN 10-SEP-18 6MF9 TITLE CRYSTAL STRUCTURE OF CGD4-650 WITH COMPOUND BI2536 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ZNKN (C2HC)+ATHOOK+BROMO DOMAIN PROTEIN, TAF250, COMPND 3 TRANSCRIPTION INITIATION FACTOR IID; COMPND 4 CHAIN: A, B; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CRYPTOSPORIDIUM PARVUM (STRAIN IOWA II); SOURCE 3 ORGANISM_TAXID: 353152; SOURCE 4 STRAIN: IOWA II; SOURCE 5 GENE: CGD4_650; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21-CODONPLUS-RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET15-MHL KEYWDS CGD4_650, BI2536, STRUCTURAL GENOMICS, STRUCTURAL GENOMICS KEYWDS 2 CONSORTIUM, SGC, BIOSYNTHETIC PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.DONG,Y.L.LIN,D.HOU,C.BOUNTRA,C.H.ARROWSMITH,A.M.EDWARDS,M.VEDADI, AUTHOR 2 R.HUI,STRUCTURAL GENOMICS CONSORTIUM (SGC) REVDAT 2 11-OCT-23 6MF9 1 COMPND REVDAT 1 10-OCT-18 6MF9 0 JRNL AUTH A.DONG,Y.L.LIN,D.HOU,C.BOUNTRA,C.H.ARROWSMITH,A.M.EDWARDS, JRNL AUTH 2 M.VEDADI,R.HUI,STRUCTURAL GENOMICS CONSORTIUM (SGC) JRNL TITL CRYSTAL STRUCTURE OF CGD4-650 WITH COMPOUND BI2536 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.04 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0222 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.04 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.86 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 22974 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.700 REMARK 3 FREE R VALUE TEST SET COUNT : 632 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.04 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.09 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1579 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.34 REMARK 3 BIN R VALUE (WORKING SET) : 0.2960 REMARK 3 BIN FREE R VALUE SET COUNT : 61 REMARK 3 BIN FREE R VALUE : 0.2900 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2052 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 74 REMARK 3 SOLVENT ATOMS : 93 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.47 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.02000 REMARK 3 B22 (A**2) : 1.92000 REMARK 3 B33 (A**2) : -0.90000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.152 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.146 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.107 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.091 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.945 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2232 ; 0.008 ; 0.015 REMARK 3 BOND LENGTHS OTHERS (A): 2004 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3041 ; 1.446 ; 1.776 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4683 ; 0.454 ; 1.744 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 261 ; 5.131 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 81 ;32.297 ;20.864 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 332 ;12.463 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;19.862 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 301 ; 0.116 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2455 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 410 ; 0.005 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6MF9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-SEP-18. REMARK 100 THE DEPOSITION ID IS D_1000236730. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-APR-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97890 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23656 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.030 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 4.900 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.03 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.90 REMARK 200 R MERGE FOR SHELL (I) : 0.88200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: BALBES REMARK 200 STARTING MODEL: 1EQF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG 8K, 0.1M TRIS 8.5 AND 2MM REMARK 280 BI2536, PH 8.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 20.89250 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 47.81750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 44.93450 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 47.81750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 20.89250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 44.93450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1799 REMARK 465 LEU A 1800 REMARK 465 ASN A 1801 REMARK 465 GLY A 1802 REMARK 465 GLY A 1803 REMARK 465 SER A 1804 REMARK 465 GLN A 1805 REMARK 465 THR A 1806 REMARK 465 CYS A 1807 REMARK 465 ASN A 1808 REMARK 465 PHE A 1809 REMARK 465 ASN A 1810 REMARK 465 ASN A 1811 REMARK 465 ALA A 1812 REMARK 465 LEU A 1813 REMARK 465 ASN A 1814 REMARK 465 PRO A 1815 REMARK 465 SER A 1816 REMARK 465 ASN A 1817 REMARK 465 GLY A 1818 REMARK 465 GLY A 1819 REMARK 465 ALA A 1820 REMARK 465 GLY A 1821 REMARK 465 LEU A 1822 REMARK 465 HIS A 1823 REMARK 465 ILE A 1824 REMARK 465 SER A 1825 REMARK 465 ASN A 1826 REMARK 465 ASN A 1827 REMARK 465 LEU A 1828 REMARK 465 ASP A 1829 REMARK 465 GLY A 1830 REMARK 465 SER A 1831 REMARK 465 HIS A 1832 REMARK 465 ASN A 1833 REMARK 465 VAL A 1834 REMARK 465 ILE A 1835 REMARK 465 ASN A 1836 REMARK 465 ALA A 1837 REMARK 465 GLY A 1838 REMARK 465 PRO A 1965 REMARK 465 GLY B 1799 REMARK 465 LEU B 1800 REMARK 465 ASN B 1801 REMARK 465 GLY B 1802 REMARK 465 GLY B 1803 REMARK 465 SER B 1804 REMARK 465 GLN B 1805 REMARK 465 THR B 1806 REMARK 465 CYS B 1807 REMARK 465 ASN B 1808 REMARK 465 PHE B 1809 REMARK 465 ASN B 1810 REMARK 465 ASN B 1811 REMARK 465 ALA B 1812 REMARK 465 LEU B 1813 REMARK 465 ASN B 1814 REMARK 465 PRO B 1815 REMARK 465 SER B 1816 REMARK 465 ASN B 1817 REMARK 465 GLY B 1818 REMARK 465 GLY B 1819 REMARK 465 ALA B 1820 REMARK 465 GLY B 1821 REMARK 465 LEU B 1822 REMARK 465 HIS B 1823 REMARK 465 ILE B 1824 REMARK 465 SER B 1825 REMARK 465 ASN B 1826 REMARK 465 ASN B 1827 REMARK 465 LEU B 1828 REMARK 465 ASP B 1829 REMARK 465 GLY B 1830 REMARK 465 SER B 1831 REMARK 465 HIS B 1832 REMARK 465 ASN B 1833 REMARK 465 VAL B 1834 REMARK 465 ILE B 1835 REMARK 465 ASN B 1836 REMARK 465 ALA B 1837 REMARK 465 PRO B 1965 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A1840 CG OD1 ND2 REMARK 470 ASP A1849 OD1 OD2 REMARK 470 ARG A1879 CG CD NE CZ NH1 NH2 REMARK 470 ILE A1880 CD1 REMARK 470 LYS A1902 NZ REMARK 470 LYS A1903 CE NZ REMARK 470 LYS A1910 CE NZ REMARK 470 LYS A1946 CD CE NZ REMARK 470 GLN A1952 CG CD OE1 NE2 REMARK 470 LYS A1956 CE NZ REMARK 470 LYS A1964 CG CD CE NZ REMARK 470 ASN B1840 CG OD1 ND2 REMARK 470 ARG B1879 CG CD NE CZ NH1 NH2 REMARK 470 LYS B1910 CE NZ REMARK 470 LYS B1946 CD CE NZ REMARK 470 GLN B1952 CD OE1 NE2 REMARK 470 LYS B1956 NZ REMARK 470 LYS B1964 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A1881 85.55 -151.20 REMARK 500 ASN A1883 -12.57 89.25 REMARK 500 LEU A1963 55.57 -93.42 REMARK 500 ASN B1883 3.76 85.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG B1904 0.08 SIDE CHAIN REMARK 500 ARG B1909 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 R78 B 3000 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue R78 A 3000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue R78 B 3000 DBREF 6MF9 A 1800 1965 UNP Q5CQH9 Q5CQH9_CRYPI 1800 1965 DBREF 6MF9 B 1800 1965 UNP Q5CQH9 Q5CQH9_CRYPI 1800 1965 SEQADV 6MF9 GLY A 1799 UNP Q5CQH9 EXPRESSION TAG SEQADV 6MF9 GLY B 1799 UNP Q5CQH9 EXPRESSION TAG SEQRES 1 A 167 GLY LEU ASN GLY GLY SER GLN THR CYS ASN PHE ASN ASN SEQRES 2 A 167 ALA LEU ASN PRO SER ASN GLY GLY ALA GLY LEU HIS ILE SEQRES 3 A 167 SER ASN ASN LEU ASP GLY SER HIS ASN VAL ILE ASN ALA SEQRES 4 A 167 GLY PRO ASN ILE THR SER TYR THR GLU ALA LEU ASP GLU SEQRES 5 A 167 PHE CYS ILE GLU LEU GLN ARG ILE ILE ASN SER THR LYS SEQRES 6 A 167 THR LEU HIS HIS TYR SER HIS VAL PHE TRP ASN ARG VAL SEQRES 7 A 167 SER GLU ARG ILE ALA PRO ASN TYR TYR ASN LEU VAL LYS SEQRES 8 A 167 ARG PRO MET TRP LEU GLN LEU MET ILE ASN LYS CYS LYS SEQRES 9 A 167 LYS ARG GLU TYR LYS SER ARG LYS ASP PHE GLN ASP ASP SEQRES 10 A 167 LEU ASP LEU ILE VAL GLU ASN CYS LYS ILE TYR ASN GLY SEQRES 11 A 167 VAL ASN HIS PRO LEU VAL SER VAL ALA THR LEU ILE HIS SEQRES 12 A 167 SER ASN VAL VAL LYS LYS ILE ASP GLU ILE GLN GLY ILE SEQRES 13 A 167 GLU LYS ILE GLU ALA TYR LEU SER LEU LYS PRO SEQRES 1 B 167 GLY LEU ASN GLY GLY SER GLN THR CYS ASN PHE ASN ASN SEQRES 2 B 167 ALA LEU ASN PRO SER ASN GLY GLY ALA GLY LEU HIS ILE SEQRES 3 B 167 SER ASN ASN LEU ASP GLY SER HIS ASN VAL ILE ASN ALA SEQRES 4 B 167 GLY PRO ASN ILE THR SER TYR THR GLU ALA LEU ASP GLU SEQRES 5 B 167 PHE CYS ILE GLU LEU GLN ARG ILE ILE ASN SER THR LYS SEQRES 6 B 167 THR LEU HIS HIS TYR SER HIS VAL PHE TRP ASN ARG VAL SEQRES 7 B 167 SER GLU ARG ILE ALA PRO ASN TYR TYR ASN LEU VAL LYS SEQRES 8 B 167 ARG PRO MET TRP LEU GLN LEU MET ILE ASN LYS CYS LYS SEQRES 9 B 167 LYS ARG GLU TYR LYS SER ARG LYS ASP PHE GLN ASP ASP SEQRES 10 B 167 LEU ASP LEU ILE VAL GLU ASN CYS LYS ILE TYR ASN GLY SEQRES 11 B 167 VAL ASN HIS PRO LEU VAL SER VAL ALA THR LEU ILE HIS SEQRES 12 B 167 SER ASN VAL VAL LYS LYS ILE ASP GLU ILE GLN GLY ILE SEQRES 13 B 167 GLU LYS ILE GLU ALA TYR LEU SER LEU LYS PRO HET R78 A3000 38 HET R78 B3000 36 HETNAM R78 4-{[(7R)-8-CYCLOPENTYL-7-ETHYL-5-METHYL-6-OXO-5,6,7,8- HETNAM 2 R78 TETRAHYDROPTERIDIN-2-YL]AMINO}-3-METHOXY-N-(1- HETNAM 3 R78 METHYLPIPERIDIN-4-YL)BENZAMIDE FORMUL 3 R78 2(C28 H39 N7 O3) FORMUL 5 HOH *93(H2 O) HELIX 1 AA1 SER A 1843 THR A 1862 1 20 HELIX 2 AA2 LYS A 1863 LEU A 1865 5 3 HELIX 3 AA3 TYR A 1868 TRP A 1873 5 6 HELIX 4 AA4 ASN A 1883 VAL A 1888 1 6 HELIX 5 AA5 TRP A 1893 LYS A 1903 1 11 HELIX 6 AA6 SER A 1908 GLY A 1928 1 21 HELIX 7 AA7 HIS A 1931 GLU A 1950 1 20 HELIX 8 AA8 GLY A 1953 SER A 1962 1 10 HELIX 9 AA9 SER B 1843 THR B 1862 1 20 HELIX 10 AB1 LYS B 1863 LEU B 1865 5 3 HELIX 11 AB2 TYR B 1868 TRP B 1873 5 6 HELIX 12 AB3 ASN B 1883 VAL B 1888 1 6 HELIX 13 AB4 TRP B 1893 LYS B 1903 1 11 HELIX 14 AB5 SER B 1908 GLY B 1928 1 21 HELIX 15 AB6 HIS B 1931 GLU B 1950 1 20 HELIX 16 AB7 GLY B 1953 LYS B 1964 1 12 SITE 1 AC1 9 VAL A1871 ILE A1880 ALA A1881 TYR A1926 SITE 2 AC1 9 ASN A1927 HOH A3117 ASN B1883 ILE B1925 SITE 3 AC1 9 TYR B1926 SITE 1 AC2 11 ASN A1883 ILE A1925 TYR A1926 VAL B1871 SITE 2 AC2 11 VAL B1876 ILE B1880 ALA B1881 TYR B1926 SITE 3 AC2 11 ASN B1927 LEU B1933 HOH B3110 CRYST1 41.785 89.869 95.635 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023932 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011127 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010456 0.00000