HEADER HYDROLASE 16-SEP-18 6MGX TITLE CRYSTAL STRUCTURE OF THE NEW DELI METALLO BETA LACTAMASE VARIANT 6 TITLE 2 KLEBSIELLA PNEUMONIAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: METALLO-BETA-LACTAMASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: NDM CARBAPENEMASE; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: BLANDM-6; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: GOLD; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS METALLO BETA LACTAMASE, CARBAPENEMASES, STRUCTURAL GENOMICS, CENTER KEYWDS 2 FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.KIM,C.TESAR,R.JEDRZEJCZAK,A.JOACHIMIAK,CENTER FOR STRUCTURAL AUTHOR 2 GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 3 11-OCT-23 6MGX 1 REMARK LINK REVDAT 2 18-DEC-19 6MGX 1 REMARK REVDAT 1 03-OCT-18 6MGX 0 JRNL AUTH Y.KIM,C.TESAR,R.JEDRZEJCZAK,A.JOACHIMIAK, JRNL AUTH 2 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES JRNL AUTH 3 (CSGID) JRNL TITL CRYSTAL STRUCTURE OF THE NEW DELI METALLO BETA LACTAMASE JRNL TITL 2 VARIANT 6 KLEBSIELLA PNEUMONIAE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.13_2998: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.03 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.9 REMARK 3 NUMBER OF REFLECTIONS : 12706 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.212 REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.260 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.860 REMARK 3 FREE R VALUE TEST SET COUNT : 617 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.0384 - 4.1253 0.95 3077 156 0.1754 0.2187 REMARK 3 2 4.1253 - 3.2749 0.98 3050 152 0.2023 0.2652 REMARK 3 3 3.2749 - 2.8611 0.99 3019 162 0.2435 0.2898 REMARK 3 4 2.8611 - 2.5996 0.96 2943 147 0.2851 0.3381 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.390 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.500 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 3469 REMARK 3 ANGLE : 0.987 4724 REMARK 3 CHIRALITY : 0.055 529 REMARK 3 PLANARITY : 0.002 621 REMARK 3 DIHEDRAL : 17.311 1199 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 43 THROUGH 72 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.4505 -9.2627 -5.1089 REMARK 3 T TENSOR REMARK 3 T11: 0.3491 T22: 0.3051 REMARK 3 T33: 0.4876 T12: 0.0221 REMARK 3 T13: -0.0971 T23: 0.0199 REMARK 3 L TENSOR REMARK 3 L11: 2.0915 L22: 2.2863 REMARK 3 L33: 3.5082 L12: -1.2340 REMARK 3 L13: -0.1678 L23: -0.0586 REMARK 3 S TENSOR REMARK 3 S11: -0.2119 S12: -0.1139 S13: -0.0853 REMARK 3 S21: -0.0359 S22: -0.1521 S23: -0.1569 REMARK 3 S31: 0.2453 S32: 0.6181 S33: 0.2663 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 73 THROUGH 118 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.8998 -5.9395 -6.3962 REMARK 3 T TENSOR REMARK 3 T11: 0.3007 T22: 0.3014 REMARK 3 T33: 0.3370 T12: -0.0088 REMARK 3 T13: -0.0321 T23: -0.0101 REMARK 3 L TENSOR REMARK 3 L11: 1.8462 L22: 1.3541 REMARK 3 L33: 1.1026 L12: -0.3958 REMARK 3 L13: 0.2173 L23: -0.2492 REMARK 3 S TENSOR REMARK 3 S11: 0.0441 S12: -0.0459 S13: -0.3969 REMARK 3 S21: 0.1632 S22: -0.0251 S23: 0.2237 REMARK 3 S31: 0.2893 S32: -0.0456 S33: -0.1287 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 119 THROUGH 269 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.7374 9.1093 -5.0123 REMARK 3 T TENSOR REMARK 3 T11: 0.2811 T22: 0.2769 REMARK 3 T33: 0.3260 T12: 0.0022 REMARK 3 T13: 0.0063 T23: -0.0196 REMARK 3 L TENSOR REMARK 3 L11: 1.5524 L22: 1.2715 REMARK 3 L33: 1.0150 L12: 0.5503 REMARK 3 L13: 0.8031 L23: -0.0085 REMARK 3 S TENSOR REMARK 3 S11: 0.0970 S12: 0.0922 S13: -0.0043 REMARK 3 S21: 0.0762 S22: -0.0540 S23: -0.1264 REMARK 3 S31: -0.0626 S32: 0.0409 S33: -0.0656 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 41 THROUGH 57 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.8917 51.1645 -21.9918 REMARK 3 T TENSOR REMARK 3 T11: 0.4940 T22: 0.3348 REMARK 3 T33: 0.3947 T12: 0.0235 REMARK 3 T13: 0.0550 T23: -0.0216 REMARK 3 L TENSOR REMARK 3 L11: 2.3857 L22: 2.1658 REMARK 3 L33: 2.3085 L12: 1.0066 REMARK 3 L13: 1.1668 L23: 1.0127 REMARK 3 S TENSOR REMARK 3 S11: 0.1303 S12: 0.3435 S13: 0.1845 REMARK 3 S21: -0.2944 S22: 0.0191 S23: -0.3394 REMARK 3 S31: -0.2548 S32: 0.3171 S33: 0.0242 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 58 THROUGH 72 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.8308 45.5124 -18.1972 REMARK 3 T TENSOR REMARK 3 T11: 0.5172 T22: 0.4650 REMARK 3 T33: 0.3516 T12: -0.0491 REMARK 3 T13: -0.0615 T23: 0.0629 REMARK 3 L TENSOR REMARK 3 L11: 8.0312 L22: 0.7688 REMARK 3 L33: 1.3249 L12: -2.4417 REMARK 3 L13: 3.1574 L23: -0.9313 REMARK 3 S TENSOR REMARK 3 S11: -0.0508 S12: 0.3254 S13: 0.2813 REMARK 3 S21: 0.5074 S22: -0.1872 S23: -0.0798 REMARK 3 S31: -0.1576 S32: 0.6167 S33: 0.1121 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 73 THROUGH 228 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.7396 35.0235 -14.1546 REMARK 3 T TENSOR REMARK 3 T11: 0.2754 T22: 0.2842 REMARK 3 T33: 0.2874 T12: 0.0027 REMARK 3 T13: -0.0157 T23: 0.0042 REMARK 3 L TENSOR REMARK 3 L11: 0.7266 L22: 0.9296 REMARK 3 L33: 1.2280 L12: 0.0474 REMARK 3 L13: -0.3755 L23: -0.1573 REMARK 3 S TENSOR REMARK 3 S11: -0.0528 S12: -0.0611 S13: -0.0943 REMARK 3 S21: 0.0606 S22: 0.0134 S23: -0.0937 REMARK 3 S31: 0.0244 S32: 0.0480 S33: 0.0379 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 229 THROUGH 269 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.7705 29.1620 -29.4508 REMARK 3 T TENSOR REMARK 3 T11: 0.2719 T22: 0.3045 REMARK 3 T33: 0.2858 T12: 0.0176 REMARK 3 T13: -0.0231 T23: 0.0043 REMARK 3 L TENSOR REMARK 3 L11: 0.4915 L22: 1.6536 REMARK 3 L33: 1.1520 L12: 0.1287 REMARK 3 L13: -0.2628 L23: 0.0469 REMARK 3 S TENSOR REMARK 3 S11: 0.1101 S12: -0.0968 S13: -0.0895 REMARK 3 S21: -0.1629 S22: 0.0112 S23: 0.1942 REMARK 3 S31: 0.0432 S32: -0.1144 S33: -0.1540 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6MGX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-SEP-18. REMARK 100 THE DEPOSITION ID IS D_1000236936. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-JUL-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97915 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12723 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.16600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 0.69300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.230 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: 4HL2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.98 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM CITRATE, 20% (W/V) PEG REMARK 280 4000, 20% (V/V) 2-PROPANOL, PH 8.0, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 35.35750 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 39.03400 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.95050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 39.03400 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.35750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.95050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -293.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 28 REMARK 465 ASN A 29 REMARK 465 ALA A 30 REMARK 465 ILE A 31 REMARK 465 ARG A 32 REMARK 465 PRO A 33 REMARK 465 THR A 34 REMARK 465 ILE A 35 REMARK 465 GLY A 36 REMARK 465 GLN A 37 REMARK 465 GLN A 38 REMARK 465 MET A 39 REMARK 465 GLU A 40 REMARK 465 THR A 41 REMARK 465 PRO A 68 REMARK 465 GLY A 69 REMARK 465 SER B 28 REMARK 465 ASN B 29 REMARK 465 ALA B 30 REMARK 465 ILE B 31 REMARK 465 ARG B 32 REMARK 465 PRO B 33 REMARK 465 THR B 34 REMARK 465 ILE B 35 REMARK 465 GLY B 36 REMARK 465 GLN B 37 REMARK 465 GLN B 38 REMARK 465 MET B 39 REMARK 465 GLU B 40 REMARK 465 PRO B 68 REMARK 465 GLY B 69 REMARK 465 PHE B 70 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 216 CE REMARK 480 ARG A 270 C CZ REMARK 480 ARG B 270 C CZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N MET B 67 O GLY B 71 2.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 90 148.45 65.16 REMARK 500 ASP B 90 146.19 66.30 REMARK 500 LEU B 269 -62.70 -90.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 120 NE2 REMARK 620 2 HIS A 122 ND1 92.7 REMARK 620 3 HIS A 189 NE2 120.7 113.1 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 303 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 152 OE1 REMARK 620 2 ASP A 223 OD2 102.1 REMARK 620 3 HOH A 407 O 73.2 134.0 REMARK 620 4 GLU B 227 OE2 119.3 115.3 105.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 302 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 208 SG REMARK 620 2 HIS A 250 NE2 107.4 REMARK 620 3 SO4 A 304 O3 127.3 122.7 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 303 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 227 OE1 REMARK 620 2 GLU A 227 OE2 52.3 REMARK 620 3 HOH A 421 O 91.3 121.7 REMARK 620 4 GLU B 152 OE2 81.8 95.8 125.5 REMARK 620 5 ASP B 223 OD2 135.0 82.9 120.2 100.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 120 NE2 REMARK 620 2 HIS B 122 ND1 97.9 REMARK 620 3 HIS B 189 NE2 116.8 112.2 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 302 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 124 OD1 REMARK 620 2 CYS B 208 SG 92.7 REMARK 620 3 HIS B 250 NE2 93.8 101.9 REMARK 620 4 SO4 B 304 O2 85.7 134.2 123.8 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 305 DBREF 6MGX A 31 270 UNP G9JVE6 G9JVE6_ECOLX 31 270 DBREF 6MGX B 31 270 UNP G9JVE6 G9JVE6_ECOLX 31 270 SEQADV 6MGX SER A 28 UNP G9JVE6 EXPRESSION TAG SEQADV 6MGX ASN A 29 UNP G9JVE6 EXPRESSION TAG SEQADV 6MGX ALA A 30 UNP G9JVE6 EXPRESSION TAG SEQADV 6MGX SER B 28 UNP G9JVE6 EXPRESSION TAG SEQADV 6MGX ASN B 29 UNP G9JVE6 EXPRESSION TAG SEQADV 6MGX ALA B 30 UNP G9JVE6 EXPRESSION TAG SEQRES 1 A 243 SER ASN ALA ILE ARG PRO THR ILE GLY GLN GLN MET GLU SEQRES 2 A 243 THR GLY ASP GLN ARG PHE GLY ASP LEU VAL PHE ARG GLN SEQRES 3 A 243 LEU ALA PRO ASN VAL TRP GLN HIS THR SER TYR LEU ASP SEQRES 4 A 243 MET PRO GLY PHE GLY ALA VAL ALA SER ASN GLY LEU ILE SEQRES 5 A 243 VAL ARG ASP GLY GLY ARG VAL LEU VAL VAL ASP THR ALA SEQRES 6 A 243 TRP THR ASP ASP GLN THR ALA GLN ILE LEU ASN TRP ILE SEQRES 7 A 243 LYS GLN GLU ILE ASN LEU PRO VAL ALA LEU ALA VAL VAL SEQRES 8 A 243 THR HIS ALA HIS GLN ASP LYS MET GLY GLY MET ASP ALA SEQRES 9 A 243 LEU HIS ALA ALA GLY ILE ALA THR TYR ALA ASN ALA LEU SEQRES 10 A 243 SER ASN GLN LEU ALA PRO GLN GLU GLY MET VAL ALA ALA SEQRES 11 A 243 GLN HIS SER LEU THR PHE ALA ALA ASN GLY TRP VAL GLU SEQRES 12 A 243 PRO ALA THR ALA PRO ASN PHE GLY PRO LEU LYS VAL PHE SEQRES 13 A 243 TYR PRO GLY PRO GLY HIS THR SER ASP ASN ILE THR VAL SEQRES 14 A 243 GLY ILE ASP GLY THR ASP ILE ALA PHE GLY GLY CYS LEU SEQRES 15 A 243 ILE LYS ASP SER LYS ALA LYS SER LEU GLY ASN LEU GLY SEQRES 16 A 243 ASP ALA ASP THR GLU HIS TYR ALA ALA SER VAL ARG ALA SEQRES 17 A 243 PHE GLY ALA ALA PHE PRO LYS ALA SER MET ILE VAL MET SEQRES 18 A 243 SER HIS SER ALA PRO ASP SER ARG ALA ALA ILE THR HIS SEQRES 19 A 243 THR ALA ARG MET ALA ASP LYS LEU ARG SEQRES 1 B 243 SER ASN ALA ILE ARG PRO THR ILE GLY GLN GLN MET GLU SEQRES 2 B 243 THR GLY ASP GLN ARG PHE GLY ASP LEU VAL PHE ARG GLN SEQRES 3 B 243 LEU ALA PRO ASN VAL TRP GLN HIS THR SER TYR LEU ASP SEQRES 4 B 243 MET PRO GLY PHE GLY ALA VAL ALA SER ASN GLY LEU ILE SEQRES 5 B 243 VAL ARG ASP GLY GLY ARG VAL LEU VAL VAL ASP THR ALA SEQRES 6 B 243 TRP THR ASP ASP GLN THR ALA GLN ILE LEU ASN TRP ILE SEQRES 7 B 243 LYS GLN GLU ILE ASN LEU PRO VAL ALA LEU ALA VAL VAL SEQRES 8 B 243 THR HIS ALA HIS GLN ASP LYS MET GLY GLY MET ASP ALA SEQRES 9 B 243 LEU HIS ALA ALA GLY ILE ALA THR TYR ALA ASN ALA LEU SEQRES 10 B 243 SER ASN GLN LEU ALA PRO GLN GLU GLY MET VAL ALA ALA SEQRES 11 B 243 GLN HIS SER LEU THR PHE ALA ALA ASN GLY TRP VAL GLU SEQRES 12 B 243 PRO ALA THR ALA PRO ASN PHE GLY PRO LEU LYS VAL PHE SEQRES 13 B 243 TYR PRO GLY PRO GLY HIS THR SER ASP ASN ILE THR VAL SEQRES 14 B 243 GLY ILE ASP GLY THR ASP ILE ALA PHE GLY GLY CYS LEU SEQRES 15 B 243 ILE LYS ASP SER LYS ALA LYS SER LEU GLY ASN LEU GLY SEQRES 16 B 243 ASP ALA ASP THR GLU HIS TYR ALA ALA SER VAL ARG ALA SEQRES 17 B 243 PHE GLY ALA ALA PHE PRO LYS ALA SER MET ILE VAL MET SEQRES 18 B 243 SER HIS SER ALA PRO ASP SER ARG ALA ALA ILE THR HIS SEQRES 19 B 243 THR ALA ARG MET ALA ASP LYS LEU ARG HET ZN A 301 1 HET ZN A 302 1 HET ZN A 303 1 HET SO4 A 304 5 HET ZN B 301 1 HET ZN B 302 1 HET ZN B 303 1 HET SO4 B 304 5 HET SO4 B 305 5 HETNAM ZN ZINC ION HETNAM SO4 SULFATE ION FORMUL 3 ZN 6(ZN 2+) FORMUL 6 SO4 3(O4 S 2-) FORMUL 12 HOH *45(H2 O) HELIX 1 AA1 THR A 94 ILE A 109 1 16 HELIX 2 AA2 HIS A 122 GLY A 127 1 6 HELIX 3 AA3 GLY A 128 ALA A 135 1 8 HELIX 4 AA4 ALA A 143 ALA A 149 1 7 HELIX 5 AA5 GLU A 170 ALA A 174 5 5 HELIX 6 AA6 HIS A 228 PHE A 240 1 13 HELIX 7 AA7 ARG A 256 LYS A 268 1 13 HELIX 8 AA8 THR B 94 ILE B 109 1 16 HELIX 9 AA9 HIS B 122 GLY B 127 1 6 HELIX 10 AB1 GLY B 128 ALA B 134 1 7 HELIX 11 AB2 ALA B 143 ALA B 149 1 7 HELIX 12 AB3 PRO B 150 GLY B 153 5 4 HELIX 13 AB4 GLU B 170 ALA B 174 5 5 HELIX 14 AB5 CYS B 208 ILE B 210 5 3 HELIX 15 AB6 HIS B 228 PHE B 240 1 13 HELIX 16 AB7 ARG B 256 ASP B 267 1 12 SHEET 1 AA1 8 GLN A 44 PHE A 46 0 SHEET 2 AA1 8 LEU A 49 ALA A 55 -1 O LEU A 49 N PHE A 46 SHEET 3 AA1 8 VAL A 58 LEU A 65 -1 O GLN A 60 N ARG A 52 SHEET 4 AA1 8 VAL A 73 ASP A 82 -1 O ILE A 79 N TRP A 59 SHEET 5 AA1 8 ARG A 85 VAL A 89 -1 O LEU A 87 N VAL A 80 SHEET 6 AA1 8 VAL A 113 VAL A 117 1 O VAL A 117 N VAL A 88 SHEET 7 AA1 8 ALA A 138 ASN A 142 1 O TYR A 140 N ALA A 116 SHEET 8 AA1 8 HIS A 159 LEU A 161 1 O LEU A 161 N ALA A 141 SHEET 1 AA2 4 LEU A 180 PHE A 183 0 SHEET 2 AA2 4 THR A 195 ILE A 198 -1 O GLY A 197 N LYS A 181 SHEET 3 AA2 4 ILE A 203 GLY A 207 -1 O PHE A 205 N VAL A 196 SHEET 4 AA2 4 MET A 245 MET A 248 1 O VAL A 247 N GLY A 206 SHEET 1 AA3 8 GLN B 44 PHE B 46 0 SHEET 2 AA3 8 LEU B 49 ALA B 55 -1 O PHE B 51 N GLN B 44 SHEET 3 AA3 8 VAL B 58 LEU B 65 -1 O GLN B 60 N ARG B 52 SHEET 4 AA3 8 VAL B 73 ASP B 82 -1 O VAL B 73 N LEU B 65 SHEET 5 AA3 8 ARG B 85 VAL B 89 -1 O LEU B 87 N VAL B 80 SHEET 6 AA3 8 VAL B 113 VAL B 117 1 O VAL B 117 N VAL B 88 SHEET 7 AA3 8 ALA B 138 ASN B 142 1 O TYR B 140 N ALA B 116 SHEET 8 AA3 8 HIS B 159 LEU B 161 1 O LEU B 161 N ALA B 141 SHEET 1 AA4 5 LEU B 180 PHE B 183 0 SHEET 2 AA4 5 THR B 195 ILE B 198 -1 O GLY B 197 N LYS B 181 SHEET 3 AA4 5 ILE B 203 GLY B 207 -1 O PHE B 205 N VAL B 196 SHEET 4 AA4 5 MET B 245 MET B 248 1 O VAL B 247 N GLY B 206 SHEET 5 AA4 5 SER B 251 ASP B 254 -1 O ASP B 254 N ILE B 246 LINK NE2 HIS A 120 ZN ZN A 301 1555 1555 2.11 LINK ND1 HIS A 122 ZN ZN A 301 1555 1555 2.03 LINK OE1 GLU A 152 ZN ZN A 303 1555 1555 1.94 LINK NE2 HIS A 189 ZN ZN A 301 1555 1555 2.09 LINK SG CYS A 208 ZN ZN A 302 1555 1555 2.59 LINK OD2 ASP A 223 ZN ZN A 303 1555 1555 1.99 LINK OE1 GLU A 227 ZN ZN B 303 1555 1555 2.43 LINK OE2 GLU A 227 ZN ZN B 303 1555 1555 2.53 LINK NE2 HIS A 250 ZN ZN A 302 1555 1555 2.18 LINK ZN ZN A 302 O3 SO4 A 304 1555 1555 1.85 LINK ZN ZN A 303 O HOH A 407 1555 1555 2.32 LINK ZN ZN A 303 OE2 GLU B 227 1555 1555 2.01 LINK O HOH A 421 ZN ZN B 303 1555 1555 2.22 LINK NE2 HIS B 120 ZN ZN B 301 1555 1555 2.21 LINK ND1 HIS B 122 ZN ZN B 301 1555 1555 2.12 LINK OD1 ASP B 124 ZN ZN B 302 1555 1555 2.63 LINK OE2 GLU B 152 ZN ZN B 303 1555 1555 2.01 LINK NE2 HIS B 189 ZN ZN B 301 1555 1555 2.13 LINK SG CYS B 208 ZN ZN B 302 1555 1555 2.47 LINK OD2 ASP B 223 ZN ZN B 303 1555 1555 2.06 LINK NE2 HIS B 250 ZN ZN B 302 1555 1555 2.22 LINK ZN ZN B 302 O2 SO4 B 304 1555 1555 1.75 SITE 1 AC1 4 HIS A 120 HIS A 122 HIS A 189 SO4 A 304 SITE 1 AC2 4 ASP A 124 CYS A 208 HIS A 250 SO4 A 304 SITE 1 AC3 4 GLU A 152 ASP A 223 HOH A 407 GLU B 227 SITE 1 AC4 8 HIS A 122 ASP A 124 HIS A 189 ASN A 220 SITE 2 AC4 8 HIS A 250 ZN A 301 ZN A 302 HOH A 411 SITE 1 AC5 4 HIS B 120 HIS B 122 HIS B 189 SO4 B 304 SITE 1 AC6 4 ASP B 124 CYS B 208 HIS B 250 SO4 B 304 SITE 1 AC7 4 GLU A 227 HOH A 421 GLU B 152 ASP B 223 SITE 1 AC8 6 HIS B 122 ASP B 124 HIS B 250 ZN B 301 SITE 2 AC8 6 ZN B 302 HOH B 401 SITE 1 AC9 3 ARG B 234 THR B 260 ARG B 264 CRYST1 70.715 73.901 78.068 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014141 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013532 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012809 0.00000