HEADER PROTEIN BINDING 29-SEP-18 6MM8 TITLE CATALYTIC SUBUNIT OF CAMP-DEPENDENT PROTEIN KINASE A IN COMPLEX WITH TITLE 2 RYR2 K2879A, S2813D PHOSPHOMIMETIC (2699-2904) CRYSTAL FORM 2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAMP-DEPENDENT PROTEIN KINASE CATALYTIC SUBUNIT ALPHA; COMPND 3 CHAIN: C; COMPND 4 FRAGMENT: RESIDUES 16-351; COMPND 5 SYNONYM: PKA C-ALPHA; COMPND 6 EC: 2.7.11.11; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: RYANODINE RECEPTOR 2; COMPND 10 CHAIN: D; COMPND 11 FRAGMENT: RESIDUES 2699-2904; COMPND 12 SYNONYM: RYR2,CARDIAC MUSCLE RYANODINE RECEPTOR,CARDIAC MUSCLE COMPND 13 RYANODINE RECEPTOR-CALCIUM RELEASE CHANNEL,TYPE 2 RYANODINE RECEPTOR; COMPND 14 ENGINEERED: YES; COMPND 15 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: PRKACA, PKACA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 10 ORGANISM_COMMON: MOUSE; SOURCE 11 ORGANISM_TAXID: 10090; SOURCE 12 GENE: RYR2; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS KINASE, COMPLEX, ION CHANNEL, ENZYME, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR F.VAN PETEGEM,O.HAJI-GHASSEMI REVDAT 3 11-OCT-23 6MM8 1 REMARK REVDAT 2 08-JAN-20 6MM8 1 REMARK REVDAT 1 08-MAY-19 6MM8 0 JRNL AUTH O.HAJI-GHASSEMI,Z.YUCHI,F.VAN PETEGEM JRNL TITL CAMP-DEPENDENT PROTEIN KINASE A IN COMPLEX WITH RYR2 PEPTIDE JRNL TITL 2 (2799-2810) JRNL REF MOL.CELL 2019 JRNL REFN ISSN 1097-2765 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0232 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.95 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.7 REMARK 3 NUMBER OF REFLECTIONS : 52992 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2798 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.90 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1957 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 46.71 REMARK 3 BIN R VALUE (WORKING SET) : 0.3040 REMARK 3 BIN FREE R VALUE SET COUNT : 99 REMARK 3 BIN FREE R VALUE : 0.3140 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4372 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 67 REMARK 3 SOLVENT ATOMS : 503 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.45 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.08000 REMARK 3 B22 (A**2) : -0.02000 REMARK 3 B33 (A**2) : 0.09000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.23000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.137 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.132 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.092 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.189 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.953 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.929 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4642 ; 0.010 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 4304 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6279 ; 1.467 ; 1.654 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10005 ; 1.402 ; 1.581 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 549 ; 6.100 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 246 ;34.366 ;22.398 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 838 ;14.936 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 27 ;20.017 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 587 ; 0.073 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5072 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 995 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6MM8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-OCT-18. REMARK 100 THE DEPOSITION ID IS D_1000237205. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-NOV-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 58151 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 35.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.06300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 81.7 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : 0.57800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6MM7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.98 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.79 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.15 M HEPES PH 7.5, 15% (W/V) PEG REMARK 280 20K, AND 25% (V/V) ETHYLENE GLYCOL, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 89.82150 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.93000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 89.82150 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 33.93000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4320 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER C 12 REMARK 465 ASN C 13 REMARK 465 LYS C 319 REMARK 465 GLY C 320 REMARK 465 PRO C 321 REMARK 465 GLY C 322 REMARK 465 ASP C 323 REMARK 465 THR C 324 REMARK 465 SER C 325 REMARK 465 ASN C 326 REMARK 465 PHE C 327 REMARK 465 ASP C 328 REMARK 465 ASP C 329 REMARK 465 SER D 2696 REMARK 465 ASN D 2697 REMARK 465 ALA D 2698 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS C 16 CG CD CE NZ REMARK 470 GLU C 17 CG CD OE1 OE2 REMARK 470 LYS C 317 CG CD CE NZ REMARK 470 PHE C 318 CG CD1 CD2 CE1 CE2 CZ REMARK 470 SER D2750 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE C 46 -62.77 -91.99 REMARK 500 ASP C 166 33.18 -148.69 REMARK 500 LYS C 168 154.61 179.64 REMARK 500 SER D2750 3.74 81.67 REMARK 500 LYS D2751 66.90 60.82 REMARK 500 ARG D2792 -159.07 -145.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG C 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACY C 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ANP C 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACY D 3001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO D 3002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL D 3003 DBREF 6MM8 C 15 350 UNP P05132 KAPCA_MOUSE 16 351 DBREF 6MM8 D 2699 2904 UNP E9Q401 RYR2_MOUSE 2699 2904 SEQADV 6MM8 SER C 12 UNP P05132 EXPRESSION TAG SEQADV 6MM8 ASN C 13 UNP P05132 EXPRESSION TAG SEQADV 6MM8 ALA C 14 UNP P05132 EXPRESSION TAG SEQADV 6MM8 SER D 2696 UNP E9Q401 EXPRESSION TAG SEQADV 6MM8 ASN D 2697 UNP E9Q401 EXPRESSION TAG SEQADV 6MM8 ALA D 2698 UNP E9Q401 EXPRESSION TAG SEQADV 6MM8 ASP D 2813 UNP E9Q401 SER 2813 ENGINEERED MUTATION SEQADV 6MM8 ALA D 2879 UNP E9Q401 LYS 2879 ENGINEERED MUTATION SEQRES 1 C 339 SER ASN ALA VAL LYS GLU PHE LEU ALA LYS ALA LYS GLU SEQRES 2 C 339 ASP PHE LEU LYS LYS TRP GLU THR PRO SER GLN ASN THR SEQRES 3 C 339 ALA GLN LEU ASP GLN PHE ASP ARG ILE LYS THR LEU GLY SEQRES 4 C 339 THR GLY SER PHE GLY ARG VAL MET LEU VAL LYS HIS LYS SEQRES 5 C 339 GLU SER GLY ASN HIS TYR ALA MET LYS ILE LEU ASP LYS SEQRES 6 C 339 GLN LYS VAL VAL LYS LEU LYS GLN ILE GLU HIS THR LEU SEQRES 7 C 339 ASN GLU LYS ARG ILE LEU GLN ALA VAL ASN PHE PRO PHE SEQRES 8 C 339 LEU VAL LYS LEU GLU PHE SER PHE LYS ASP ASN SER ASN SEQRES 9 C 339 LEU TYR MET VAL MET GLU TYR VAL ALA GLY GLY GLU MET SEQRES 10 C 339 PHE SER HIS LEU ARG ARG ILE GLY ARG PHE SER GLU PRO SEQRES 11 C 339 HIS ALA ARG PHE TYR ALA ALA GLN ILE VAL LEU THR PHE SEQRES 12 C 339 GLU TYR LEU HIS SER LEU ASP LEU ILE TYR ARG ASP LEU SEQRES 13 C 339 LYS PRO GLU ASN LEU LEU ILE ASP GLN GLN GLY TYR ILE SEQRES 14 C 339 GLN VAL THR ASP PHE GLY PHE ALA LYS ARG VAL LYS GLY SEQRES 15 C 339 ARG THR TRP TPO LEU CYS GLY THR PRO GLU TYR LEU ALA SEQRES 16 C 339 PRO GLU ILE ILE LEU SER LYS GLY TYR ASN LYS ALA VAL SEQRES 17 C 339 ASP TRP TRP ALA LEU GLY VAL LEU ILE TYR GLU MET ALA SEQRES 18 C 339 ALA GLY TYR PRO PRO PHE PHE ALA ASP GLN PRO ILE GLN SEQRES 19 C 339 ILE TYR GLU LYS ILE VAL SER GLY LYS VAL ARG PHE PRO SEQRES 20 C 339 SER HIS PHE SER SER ASP LEU LYS ASP LEU LEU ARG ASN SEQRES 21 C 339 LEU LEU GLN VAL ASP LEU THR LYS ARG PHE GLY ASN LEU SEQRES 22 C 339 LYS ASN GLY VAL ASN ASP ILE LYS ASN HIS LYS TRP PHE SEQRES 23 C 339 ALA THR THR ASP TRP ILE ALA ILE TYR GLN ARG LYS VAL SEQRES 24 C 339 GLU ALA PRO PHE ILE PRO LYS PHE LYS GLY PRO GLY ASP SEQRES 25 C 339 THR SER ASN PHE ASP ASP TYR GLU GLU GLU GLU ILE ARG SEQRES 26 C 339 VAL SEP ILE ASN GLU LYS CYS GLY LYS GLU PHE THR GLU SEQRES 27 C 339 PHE SEQRES 1 D 209 SER ASN ALA ASN PHE ASN PRO GLN PRO VAL ASP THR SER SEQRES 2 D 209 ASN ILE THR ILE PRO GLU LYS LEU GLU TYR PHE ILE ASN SEQRES 3 D 209 LYS TYR ALA GLU HIS SER HIS ASP LYS TRP SER MET ASP SEQRES 4 D 209 LYS LEU ALA ASN GLY TRP ILE TYR GLY GLU ILE TYR SER SEQRES 5 D 209 ASP SER SER LYS ILE GLN PRO LEU MET LYS PRO TYR LYS SEQRES 6 D 209 LEU LEU SER GLU LYS GLU LYS GLU ILE TYR ARG TRP PRO SEQRES 7 D 209 ILE LYS GLU SER LEU LYS THR MET LEU ALA TRP GLY TRP SEQRES 8 D 209 ARG ILE GLU ARG THR ARG GLU GLY ASP SER MET ALA LEU SEQRES 9 D 209 TYR ASN ARG THR ARG ARG ILE SER GLN THR SER GLN VAL SEQRES 10 D 209 ASP ILE ASP ALA ALA HIS GLY TYR SER PRO ARG ALA ILE SEQRES 11 D 209 ASP MET SER ASN VAL THR LEU SER ARG ASP LEU HIS ALA SEQRES 12 D 209 MET ALA GLU MET MET ALA GLU ASN TYR HIS ASN ILE TRP SEQRES 13 D 209 ALA LYS LYS LYS LYS LEU GLU LEU GLU SER LYS GLY GLY SEQRES 14 D 209 GLY ASN HIS PRO LEU LEU VAL PRO TYR ASP THR LEU THR SEQRES 15 D 209 ALA ALA GLU LYS ALA LYS ASP ARG GLU LYS ALA GLN ASP SEQRES 16 D 209 ILE PHE LYS PHE LEU GLN ILE SER GLY TYR VAL VAL SER SEQRES 17 D 209 ARG MODRES 6MM8 TPO C 197 THR MODIFIED RESIDUE MODRES 6MM8 SEP C 338 SER MODIFIED RESIDUE HET TPO C 197 11 HET SEP C 338 10 HET PEG C 401 7 HET ACY C 402 4 HET ANP C 403 62 HET EDO C 404 4 HET EDO C 405 4 HET EDO C 406 4 HET EDO C 407 4 HET ACY D3001 4 HET EDO D3002 4 HET CL D3003 1 HETNAM TPO PHOSPHOTHREONINE HETNAM SEP PHOSPHOSERINE HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM ACY ACETIC ACID HETNAM ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER HETNAM EDO 1,2-ETHANEDIOL HETNAM CL CHLORIDE ION HETSYN TPO PHOSPHONOTHREONINE HETSYN SEP PHOSPHONOSERINE HETSYN EDO ETHYLENE GLYCOL FORMUL 1 TPO C4 H10 N O6 P FORMUL 1 SEP C3 H8 N O6 P FORMUL 3 PEG C4 H10 O3 FORMUL 4 ACY 2(C2 H4 O2) FORMUL 5 ANP C10 H17 N6 O12 P3 FORMUL 6 EDO 5(C2 H6 O2) FORMUL 12 CL CL 1- FORMUL 13 HOH *503(H2 O) HELIX 1 AA1 ALA C 14 THR C 32 1 19 HELIX 2 AA2 GLN C 39 ASP C 41 5 3 HELIX 3 AA3 LYS C 76 LEU C 82 1 7 HELIX 4 AA4 GLN C 84 GLN C 96 1 13 HELIX 5 AA5 MET C 128 GLY C 136 1 9 HELIX 6 AA6 SER C 139 LEU C 160 1 22 HELIX 7 AA7 LYS C 168 GLU C 170 5 3 HELIX 8 AA8 THR C 201 LEU C 205 5 5 HELIX 9 AA9 ALA C 206 LEU C 211 1 6 HELIX 10 AB1 LYS C 217 GLY C 234 1 18 HELIX 11 AB2 GLN C 242 GLY C 253 1 12 HELIX 12 AB3 SER C 262 LEU C 273 1 12 HELIX 13 AB4 ASP C 276 ARG C 280 5 5 HELIX 14 AB5 VAL C 288 ASN C 293 1 6 HELIX 15 AB6 HIS C 294 ALA C 298 5 5 HELIX 16 AB7 ASP C 301 GLN C 307 1 7 HELIX 17 AB8 PRO D 2713 LYS D 2715 5 3 HELIX 18 AB9 LEU D 2716 ASN D 2738 1 23 HELIX 19 AC1 PRO D 2758 LEU D 2762 5 5 HELIX 20 AC2 SER D 2763 TRP D 2784 1 22 HELIX 21 AC3 ASP D 2795 TYR D 2800 1 6 HELIX 22 AC4 SER D 2810 ALA D 2817 1 8 HELIX 23 AC5 ASP D 2826 VAL D 2830 5 5 HELIX 24 AC6 SER D 2833 GLY D 2863 1 31 HELIX 25 AC7 PRO D 2872 LEU D 2876 5 5 HELIX 26 AC8 THR D 2877 SER D 2898 1 22 SHEET 1 AA1 5 PHE C 43 THR C 51 0 SHEET 2 AA1 5 GLY C 55 HIS C 62 -1 O LEU C 59 N LYS C 47 SHEET 3 AA1 5 HIS C 68 ASP C 75 -1 O MET C 71 N MET C 58 SHEET 4 AA1 5 ASN C 115 GLU C 121 -1 O LEU C 116 N LEU C 74 SHEET 5 AA1 5 LEU C 106 LYS C 111 -1 N PHE C 110 O TYR C 117 SHEET 1 AA2 3 GLY C 126 GLU C 127 0 SHEET 2 AA2 3 LEU C 172 ILE C 174 -1 O ILE C 174 N GLY C 126 SHEET 3 AA2 3 ILE C 180 VAL C 182 -1 O GLN C 181 N LEU C 173 SHEET 1 AA3 2 LEU C 162 ILE C 163 0 SHEET 2 AA3 2 LYS C 189 ARG C 190 -1 O LYS C 189 N ILE C 163 SHEET 1 AA4 2 ARG D2787 ARG D2790 0 SHEET 2 AA4 2 TYR D2900 SER D2903 -1 O VAL D2901 N GLU D2789 LINK C TRP C 196 N TPO C 197 1555 1555 1.34 LINK C TPO C 197 N LEU C 198 1555 1555 1.33 LINK C VAL C 337 N SEP C 338 1555 1555 1.33 LINK C SEP C 338 N ILE C 339 1555 1555 1.35 SITE 1 AC1 9 ASN C 99 PHE C 100 PRO C 101 ARG C 308 SITE 2 AC1 9 HOH C 503 HOH C 645 SER D2861 LYS D2862 SITE 3 AC1 9 HOH D3120 SITE 1 AC2 7 ILE C 135 ARG C 137 PHE C 138 SER C 139 SITE 2 AC2 7 HIS C 142 EDO C 404 TRP D2784 SITE 1 AC3 13 GLY C 52 SER C 53 VAL C 57 ALA C 70 SITE 2 AC3 13 LYS C 72 GLU C 121 VAL C 123 GLU C 127 SITE 3 AC3 13 HOH C 518 HOH C 535 HOH C 637 HOH C 727 SITE 4 AC3 13 ARG D2804 SITE 1 AC4 6 HIS C 131 HIS C 142 TYR C 146 PHE C 314 SITE 2 AC4 6 ACY C 402 HOH C 507 SITE 1 AC5 6 LYS C 72 GLU C 91 LEU C 95 VAL C 104 SITE 2 AC5 6 THR C 183 HOH C 614 SITE 1 AC6 4 ASN C 36 ALA C 38 GLN C 42 HOH C 597 SITE 1 AC7 4 ALA C 298 THR C 299 THR C 300 HOH C 608 SITE 1 AC8 5 THR D2711 ILE D2712 LYS D2775 LYS D2779 SITE 2 AC8 5 HOH D3255 SITE 1 AC9 6 SER D2727 PRO D2773 ILE D2774 HOH D3114 SITE 2 AC9 6 HOH D3143 HOH D3160 SITE 1 AD1 4 GLU C 140 TRP D2786 MET D2842 ARG D2904 CRYST1 179.643 67.860 58.529 90.00 92.22 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005567 0.000000 0.000215 0.00000 SCALE2 0.000000 0.014736 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017098 0.00000