HEADER TRANSFERASE 01-OCT-18 6MN3 TITLE CRYSTAL STRUCTURE OF AMINOGLYCOSIDE ACETYLTRANSFERASE AAC(3)-IVA, TITLE 2 APOENZYME COMPND MOL_ID: 1; COMPND 2 MOLECULE: AMINOGLYCOSIDE N(3)-ACETYLTRANSFERASE, AAC(3)-IVA; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.3.1.81; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: AACC4, AAC(3), AAC(3)-IV, AAC(3)IV, B9T59_28975, BEN53_26235, SOURCE 5 BJJ90_27515, BK373_27930, BK400_28640, BVL39_27730, BZL31_07055, SOURCE 6 BZL69_29365, C5P01_27985, C7235_00480, CR538_26885, CWS33_26775, SOURCE 7 CXB56_01995, DK267_24825, DK268_23980, DK278_24785, DK279_23955, SOURCE 8 DK288_24810, DK289_23980, PEC012_00026; SOURCE 9 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 11 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) GOLD; SOURCE 12 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 13 EXPRESSION_SYSTEM_PLASMID: PET19BTEV KEYWDS ANTIBIOTIC_NAT FAMILY, ACETYLTRANSFERASE, AMINOGLYCOSIDE, ANTIBIOTIC KEYWDS 2 RESISTANCE, COENZYME A, AAC(3)-IVA, CSGID, TRANSFERASE, CENTER FOR KEYWDS 3 STRUCTURAL GENOMICS OF INFECTIOUS DISEASES, NATIONAL INSTITUTE OF KEYWDS 4 ALLERGY AND INFECTIOUS DISEASES, NIAID EXPDTA X-RAY DIFFRACTION AUTHOR P.J.STOGIOS,E.EVDOKIMOVA,Z.WAWRZAK,R.DI LEO,A.SAVCHENKO,A.JOACHIMIAK, AUTHOR 2 K.J.SATCHELL,CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES AUTHOR 3 (CSGID) REVDAT 4 11-OCT-23 6MN3 1 REMARK REVDAT 3 06-APR-22 6MN3 1 JRNL REVDAT 2 18-DEC-19 6MN3 1 REMARK REVDAT 1 24-OCT-18 6MN3 0 JRNL AUTH P.J.STOGIOS,E.BORDELEAU,Z.XU,T.SKARINA,E.EVDOKIMOVA,S.CHOU, JRNL AUTH 2 L.DIORIO-TOTH,A.W.D'SOUZA,S.PATEL,G.DANTAS,G.D.WRIGHT, JRNL AUTH 3 A.SAVCHENKO JRNL TITL STRUCTURAL AND MOLECULAR RATIONALE FOR THE DIVERSIFICATION JRNL TITL 2 OF RESISTANCE MEDIATED BY THE ANTIBIOTIC_NAT FAMILY. JRNL REF COMMUN BIOL V. 5 263 2022 JRNL REFN ESSN 2399-3642 JRNL PMID 35338238 JRNL DOI 10.1038/S42003-022-03219-W REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (DEV_3092: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.77 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 22452 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.222 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1123 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.7709 - 4.7942 1.00 2777 147 0.1587 0.1837 REMARK 3 2 4.7942 - 3.8078 0.98 2666 140 0.1260 0.1671 REMARK 3 3 3.8078 - 3.3272 0.97 2607 138 0.1503 0.2027 REMARK 3 4 3.3272 - 3.0233 0.98 2621 137 0.1912 0.2438 REMARK 3 5 3.0233 - 2.8068 0.99 2672 140 0.2163 0.2681 REMARK 3 6 2.8068 - 2.6414 0.99 2631 140 0.2246 0.2713 REMARK 3 7 2.6414 - 2.5092 1.00 2694 141 0.2421 0.3034 REMARK 3 8 2.5092 - 2.4000 1.00 2661 140 0.2640 0.3255 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.760 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 4023 REMARK 3 ANGLE : 0.579 5490 REMARK 3 CHIRALITY : 0.042 613 REMARK 3 PLANARITY : 0.005 729 REMARK 3 DIHEDRAL : 17.449 1486 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 0 THROUGH 61 ) REMARK 3 ORIGIN FOR THE GROUP (A): -43.1903 -15.8746 71.1902 REMARK 3 T TENSOR REMARK 3 T11: 0.2129 T22: 0.2233 REMARK 3 T33: 0.2194 T12: 0.0025 REMARK 3 T13: -0.0212 T23: -0.0402 REMARK 3 L TENSOR REMARK 3 L11: 1.6181 L22: 4.1852 REMARK 3 L33: 6.1839 L12: -0.3851 REMARK 3 L13: 0.6177 L23: -2.8901 REMARK 3 S TENSOR REMARK 3 S11: 0.0267 S12: 0.0532 S13: -0.0657 REMARK 3 S21: -0.5420 S22: 0.0009 S23: 0.0481 REMARK 3 S31: 0.3932 S32: -0.0119 S33: -0.0613 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 62 THROUGH 172 ) REMARK 3 ORIGIN FOR THE GROUP (A): -36.9797 -9.0703 53.5607 REMARK 3 T TENSOR REMARK 3 T11: 0.9417 T22: 0.5289 REMARK 3 T33: 0.3366 T12: -0.0198 REMARK 3 T13: 0.1053 T23: -0.0081 REMARK 3 L TENSOR REMARK 3 L11: 1.7652 L22: 3.5712 REMARK 3 L33: 2.4302 L12: 1.5957 REMARK 3 L13: 0.8386 L23: -0.3198 REMARK 3 S TENSOR REMARK 3 S11: -0.3756 S12: 0.6490 S13: 0.0487 REMARK 3 S21: -1.6912 S22: 0.1859 S23: -0.3514 REMARK 3 S31: 0.5272 S32: 0.0901 S33: 0.1192 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 173 THROUGH 190 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.3348 -8.4040 44.4418 REMARK 3 T TENSOR REMARK 3 T11: 1.6031 T22: 1.1131 REMARK 3 T33: 0.9321 T12: 0.1328 REMARK 3 T13: 0.5021 T23: 0.0469 REMARK 3 L TENSOR REMARK 3 L11: 0.4411 L22: 1.5062 REMARK 3 L33: 0.1781 L12: 0.7982 REMARK 3 L13: -0.1788 L23: -0.6058 REMARK 3 S TENSOR REMARK 3 S11: -0.7060 S12: -0.0242 S13: -1.4147 REMARK 3 S21: -1.1261 S22: 0.3913 S23: -0.7331 REMARK 3 S31: 0.9292 S32: 0.0088 S33: 0.4477 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 191 THROUGH 257 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.4944 -0.1380 64.9792 REMARK 3 T TENSOR REMARK 3 T11: 0.3692 T22: 0.5519 REMARK 3 T33: 0.4887 T12: -0.0426 REMARK 3 T13: 0.0994 T23: 0.1124 REMARK 3 L TENSOR REMARK 3 L11: 0.5981 L22: 3.1234 REMARK 3 L33: 3.1989 L12: 0.5078 REMARK 3 L13: -0.1423 L23: -1.1269 REMARK 3 S TENSOR REMARK 3 S11: -0.0582 S12: -0.0146 S13: -0.0713 REMARK 3 S21: -0.4720 S22: -0.3563 S23: -0.9608 REMARK 3 S31: -0.3315 S32: 0.8921 S33: 0.2096 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID -1 THROUGH 17 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.4165 41.4819 98.1349 REMARK 3 T TENSOR REMARK 3 T11: 0.3186 T22: 0.2108 REMARK 3 T33: 0.2507 T12: 0.0063 REMARK 3 T13: -0.0812 T23: -0.0460 REMARK 3 L TENSOR REMARK 3 L11: 9.4243 L22: 6.4759 REMARK 3 L33: 3.1956 L12: -3.2978 REMARK 3 L13: -4.7464 L23: 3.2674 REMARK 3 S TENSOR REMARK 3 S11: 0.1509 S12: -0.5978 S13: 0.5173 REMARK 3 S21: 0.2475 S22: -0.0503 S23: 0.0869 REMARK 3 S31: -0.2987 S32: 0.2886 S33: -0.1740 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 18 THROUGH 52 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.7691 36.5772 89.0028 REMARK 3 T TENSOR REMARK 3 T11: 0.1604 T22: 0.1583 REMARK 3 T33: 0.2552 T12: 0.0104 REMARK 3 T13: -0.0541 T23: -0.0091 REMARK 3 L TENSOR REMARK 3 L11: 5.1265 L22: 1.9240 REMARK 3 L33: 6.4060 L12: -0.0466 REMARK 3 L13: -3.0761 L23: 0.2038 REMARK 3 S TENSOR REMARK 3 S11: 0.0639 S12: 0.1014 S13: 0.4103 REMARK 3 S21: 0.0422 S22: -0.0818 S23: 0.0703 REMARK 3 S31: -0.2813 S32: -0.3292 S33: 0.0053 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 53 THROUGH 128 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.6629 27.2277 76.9184 REMARK 3 T TENSOR REMARK 3 T11: 0.2204 T22: 0.2717 REMARK 3 T33: 0.2806 T12: 0.0007 REMARK 3 T13: -0.0099 T23: -0.0072 REMARK 3 L TENSOR REMARK 3 L11: 4.1704 L22: 5.2019 REMARK 3 L33: 3.3000 L12: 0.7831 REMARK 3 L13: 1.2583 L23: 0.6428 REMARK 3 S TENSOR REMARK 3 S11: 0.1000 S12: 0.2446 S13: -0.3361 REMARK 3 S21: -0.2766 S22: -0.0279 S23: 0.3023 REMARK 3 S31: 0.2605 S32: -0.2510 S33: -0.0450 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 129 THROUGH 174 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.4613 18.0881 79.6077 REMARK 3 T TENSOR REMARK 3 T11: 0.2014 T22: 0.2639 REMARK 3 T33: 0.3413 T12: 0.0237 REMARK 3 T13: -0.0157 T23: -0.0238 REMARK 3 L TENSOR REMARK 3 L11: 1.8282 L22: 2.2828 REMARK 3 L33: 1.7346 L12: -0.2258 REMARK 3 L13: 0.7255 L23: -0.0715 REMARK 3 S TENSOR REMARK 3 S11: 0.2423 S12: 0.2988 S13: -0.2686 REMARK 3 S21: -0.1537 S22: -0.1753 S23: 0.2711 REMARK 3 S31: 0.1232 S32: -0.2043 S33: -0.0673 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 175 THROUGH 190 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.0219 11.2387 75.5871 REMARK 3 T TENSOR REMARK 3 T11: 0.4433 T22: 0.3912 REMARK 3 T33: 0.7659 T12: -0.1291 REMARK 3 T13: -0.1243 T23: 0.0554 REMARK 3 L TENSOR REMARK 3 L11: 6.3414 L22: 1.7943 REMARK 3 L33: 4.6884 L12: -0.5149 REMARK 3 L13: 2.4352 L23: 2.5648 REMARK 3 S TENSOR REMARK 3 S11: 0.0559 S12: 0.7537 S13: -0.8548 REMARK 3 S21: -0.1373 S22: 0.2233 S23: 0.6837 REMARK 3 S31: -0.5514 S32: 0.2813 S33: -0.3389 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 191 THROUGH 234 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.3090 20.9549 90.2250 REMARK 3 T TENSOR REMARK 3 T11: 0.1621 T22: 0.2311 REMARK 3 T33: 0.2722 T12: -0.0044 REMARK 3 T13: -0.0259 T23: 0.0195 REMARK 3 L TENSOR REMARK 3 L11: 1.2755 L22: 5.3301 REMARK 3 L33: 2.3172 L12: -1.5681 REMARK 3 L13: -0.7782 L23: 3.2577 REMARK 3 S TENSOR REMARK 3 S11: 0.0179 S12: -0.0683 S13: -0.0950 REMARK 3 S21: 0.3529 S22: 0.0791 S23: -0.2130 REMARK 3 S31: 0.2320 S32: 0.1788 S33: -0.1275 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 235 THROUGH 257 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.4568 2.5326 89.3453 REMARK 3 T TENSOR REMARK 3 T11: 0.4273 T22: 0.3808 REMARK 3 T33: 0.5292 T12: -0.0642 REMARK 3 T13: -0.0151 T23: 0.1101 REMARK 3 L TENSOR REMARK 3 L11: 6.8233 L22: 5.8929 REMARK 3 L33: 9.0768 L12: 3.4383 REMARK 3 L13: -3.4996 L23: 0.6434 REMARK 3 S TENSOR REMARK 3 S11: -0.0817 S12: -0.2162 S13: -0.5728 REMARK 3 S21: 0.5035 S22: 0.0948 S23: 0.4100 REMARK 3 S31: 1.1611 S32: -0.7941 S33: -0.0607 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6MN3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-OCT-18. REMARK 100 THE DEPOSITION ID IS D_1000235582. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-AUG-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22593 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.14100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.9800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.90 REMARK 200 R MERGE FOR SHELL (I) : 0.99700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.250 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MORDA REMARK 200 STARTING MODEL: 3SMA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.52 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.59 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS PH 8.8, 0.2 M MAGNESIUM REMARK 280 CHLORIDE, 25% (W/V) PEG 3350, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 57.08500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 27.66350 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 57.08500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 27.66350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A -1 REMARK 465 ASP A 175 REMARK 465 GLY A 176 REMARK 465 LYS A 177 REMARK 465 GLY A 258 REMARK 465 GLY B 258 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 39 5.06 80.05 REMARK 500 SER A 62 40.58 -158.14 REMARK 500 THR A 75 -32.37 -130.29 REMARK 500 ALA A 99 46.65 -102.97 REMARK 500 PHE A 102 55.42 -107.21 REMARK 500 PRO A 118 -164.38 -72.15 REMARK 500 SER A 256 46.85 -77.63 REMARK 500 SER B 62 26.62 -152.25 REMARK 500 ALA B 99 62.91 -105.27 REMARK 500 PHE B 102 46.02 -100.20 REMARK 500 HIS B 124 55.48 -116.45 REMARK 500 ALA B 127 48.24 -106.42 REMARK 500 HIS B 188 -158.69 -164.09 REMARK 500 SER B 256 20.70 -76.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 302 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 189 SG REMARK 620 2 HIS A 241 ND1 90.3 REMARK 620 3 CYS A 247 SG 103.2 126.6 REMARK 620 4 CYS A 250 SG 101.9 111.6 115.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 304 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 189 SG REMARK 620 2 HIS B 241 ND1 96.9 REMARK 620 3 CYS B 247 SG 112.0 120.1 REMARK 620 4 CYS B 250 SG 104.7 122.3 100.2 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 304 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: IDP96427 RELATED DB: TARGETTRACK DBREF 6MN3 A 1 258 UNP Q306W4 Q306W4_ECOLX 1 258 DBREF 6MN3 B 1 258 UNP Q306W4 Q306W4_ECOLX 1 258 SEQADV 6MN3 GLN A -1 UNP Q306W4 EXPRESSION TAG SEQADV 6MN3 GLY A 0 UNP Q306W4 EXPRESSION TAG SEQADV 6MN3 GLN B -1 UNP Q306W4 EXPRESSION TAG SEQADV 6MN3 GLY B 0 UNP Q306W4 EXPRESSION TAG SEQRES 1 A 260 GLN GLY MET GLN TYR GLU TRP ARG LYS ALA GLU LEU ILE SEQRES 2 A 260 GLY GLN LEU LEU ASN LEU GLY VAL THR PRO GLY GLY VAL SEQRES 3 A 260 LEU LEU VAL HIS SER SER PHE ARG SER VAL ARG PRO LEU SEQRES 4 A 260 GLU ASP GLY PRO LEU GLY LEU ILE GLU ALA LEU ARG ALA SEQRES 5 A 260 ALA LEU GLY PRO GLY GLY THR LEU VAL MET PRO SER TRP SEQRES 6 A 260 SER GLY LEU ASP ASP GLU PRO PHE ASP PRO ALA THR SER SEQRES 7 A 260 PRO VAL THR PRO ASP LEU GLY VAL VAL SER ASP THR PHE SEQRES 8 A 260 TRP ARG LEU PRO ASN VAL LYS ARG SER ALA HIS PRO PHE SEQRES 9 A 260 ALA PHE ALA ALA ALA GLY PRO GLN ALA GLU GLN ILE ILE SEQRES 10 A 260 SER ASP PRO LEU PRO LEU PRO PRO HIS SER PRO ALA SER SEQRES 11 A 260 PRO VAL ALA ARG VAL HIS GLU LEU ASP GLY GLN VAL LEU SEQRES 12 A 260 LEU LEU GLY VAL GLY HIS ASP ALA ASN THR THR LEU HIS SEQRES 13 A 260 LEU ALA GLU LEU MET ALA LYS VAL PRO TYR GLY VAL PRO SEQRES 14 A 260 ARG HIS CYS THR ILE LEU GLN ASP GLY LYS LEU VAL ARG SEQRES 15 A 260 VAL ASP TYR LEU GLU ASN ASP HIS CYS CYS GLU ARG PHE SEQRES 16 A 260 ALA LEU ALA ASP ARG TRP LEU LYS GLU LYS SER LEU GLN SEQRES 17 A 260 LYS GLU GLY PRO VAL GLY HIS ALA PHE ALA ARG LEU ILE SEQRES 18 A 260 ARG SER ARG ASP ILE VAL ALA THR ALA LEU GLY GLN LEU SEQRES 19 A 260 GLY ARG ASP PRO LEU ILE PHE LEU HIS PRO PRO GLU ALA SEQRES 20 A 260 GLY CYS GLU GLU CYS ASP ALA ALA ARG GLN SER ILE GLY SEQRES 1 B 260 GLN GLY MET GLN TYR GLU TRP ARG LYS ALA GLU LEU ILE SEQRES 2 B 260 GLY GLN LEU LEU ASN LEU GLY VAL THR PRO GLY GLY VAL SEQRES 3 B 260 LEU LEU VAL HIS SER SER PHE ARG SER VAL ARG PRO LEU SEQRES 4 B 260 GLU ASP GLY PRO LEU GLY LEU ILE GLU ALA LEU ARG ALA SEQRES 5 B 260 ALA LEU GLY PRO GLY GLY THR LEU VAL MET PRO SER TRP SEQRES 6 B 260 SER GLY LEU ASP ASP GLU PRO PHE ASP PRO ALA THR SER SEQRES 7 B 260 PRO VAL THR PRO ASP LEU GLY VAL VAL SER ASP THR PHE SEQRES 8 B 260 TRP ARG LEU PRO ASN VAL LYS ARG SER ALA HIS PRO PHE SEQRES 9 B 260 ALA PHE ALA ALA ALA GLY PRO GLN ALA GLU GLN ILE ILE SEQRES 10 B 260 SER ASP PRO LEU PRO LEU PRO PRO HIS SER PRO ALA SER SEQRES 11 B 260 PRO VAL ALA ARG VAL HIS GLU LEU ASP GLY GLN VAL LEU SEQRES 12 B 260 LEU LEU GLY VAL GLY HIS ASP ALA ASN THR THR LEU HIS SEQRES 13 B 260 LEU ALA GLU LEU MET ALA LYS VAL PRO TYR GLY VAL PRO SEQRES 14 B 260 ARG HIS CYS THR ILE LEU GLN ASP GLY LYS LEU VAL ARG SEQRES 15 B 260 VAL ASP TYR LEU GLU ASN ASP HIS CYS CYS GLU ARG PHE SEQRES 16 B 260 ALA LEU ALA ASP ARG TRP LEU LYS GLU LYS SER LEU GLN SEQRES 17 B 260 LYS GLU GLY PRO VAL GLY HIS ALA PHE ALA ARG LEU ILE SEQRES 18 B 260 ARG SER ARG ASP ILE VAL ALA THR ALA LEU GLY GLN LEU SEQRES 19 B 260 GLY ARG ASP PRO LEU ILE PHE LEU HIS PRO PRO GLU ALA SEQRES 20 B 260 GLY CYS GLU GLU CYS ASP ALA ALA ARG GLN SER ILE GLY HET CL A 301 1 HET ZN A 302 1 HET CL B 301 1 HET CL B 302 1 HET CL B 303 1 HET ZN B 304 1 HETNAM CL CHLORIDE ION HETNAM ZN ZINC ION FORMUL 3 CL 4(CL 1-) FORMUL 4 ZN 2(ZN 2+) FORMUL 9 HOH *247(H2 O) HELIX 1 AA1 ARG A 6 GLY A 18 1 13 HELIX 2 AA2 SER A 30 ARG A 35 1 6 HELIX 3 AA3 ASP A 39 GLY A 53 1 15 HELIX 4 AA4 THR A 79 LEU A 82 5 4 HELIX 5 AA5 GLY A 83 TRP A 90 1 8 HELIX 6 AA6 GLN A 110 SER A 116 1 7 HELIX 7 AA7 SER A 128 LEU A 136 1 9 HELIX 8 AA8 GLY A 146 ASN A 150 5 5 HELIX 9 AA9 THR A 151 ALA A 160 1 10 HELIX 10 AB1 CYS A 190 PHE A 193 5 4 HELIX 11 AB2 ALA A 194 LYS A 203 1 10 HELIX 12 AB3 SER A 221 ASP A 235 1 15 HELIX 13 AB4 CYS A 247 SER A 256 1 10 HELIX 14 AB5 ARG B 6 GLY B 18 1 13 HELIX 15 AB6 SER B 30 ARG B 35 1 6 HELIX 16 AB7 ASP B 39 GLY B 53 1 15 HELIX 17 AB8 THR B 79 LEU B 82 5 4 HELIX 18 AB9 GLY B 83 TRP B 90 1 8 HELIX 19 AC1 GLN B 110 SER B 116 1 7 HELIX 20 AC2 SER B 128 LEU B 136 1 9 HELIX 21 AC3 GLY B 146 ASN B 150 5 5 HELIX 22 AC4 THR B 151 ALA B 160 1 10 HELIX 23 AC5 CYS B 190 PHE B 193 5 4 HELIX 24 AC6 ALA B 194 LYS B 203 1 10 HELIX 25 AC7 SER B 221 ASP B 235 1 15 HELIX 26 AC8 PRO B 242 GLY B 246 5 5 HELIX 27 AC9 CYS B 247 SER B 256 1 10 SHEET 1 AA1 7 LYS A 96 ARG A 97 0 SHEET 2 AA1 7 PHE A 104 ALA A 107 -1 O ALA A 106 N LYS A 96 SHEET 3 AA1 7 THR A 57 PRO A 61 -1 N MET A 60 O ALA A 105 SHEET 4 AA1 7 VAL A 24 SER A 29 1 N LEU A 25 O VAL A 59 SHEET 5 AA1 7 GLN A 139 LEU A 143 1 O LEU A 143 N HIS A 28 SHEET 6 AA1 7 ALA A 214 ARG A 220 -1 O ARG A 217 N LEU A 142 SHEET 7 AA1 7 GLN A 206 VAL A 211 -1 N GLY A 209 O ALA A 216 SHEET 1 AA2 2 VAL A 166 ILE A 172 0 SHEET 2 AA2 2 VAL A 179 GLU A 185 -1 O VAL A 181 N CYS A 170 SHEET 1 AA3 7 LYS B 96 ARG B 97 0 SHEET 2 AA3 7 PHE B 104 ALA B 107 -1 O ALA B 106 N LYS B 96 SHEET 3 AA3 7 THR B 57 PRO B 61 -1 N MET B 60 O ALA B 105 SHEET 4 AA3 7 VAL B 24 SER B 29 1 N LEU B 25 O VAL B 59 SHEET 5 AA3 7 GLN B 139 LEU B 143 1 O LEU B 143 N HIS B 28 SHEET 6 AA3 7 ALA B 214 ARG B 220 -1 O ILE B 219 N VAL B 140 SHEET 7 AA3 7 GLN B 206 VAL B 211 -1 N LYS B 207 O LEU B 218 SHEET 1 AA4 2 VAL B 166 GLN B 174 0 SHEET 2 AA4 2 LYS B 177 GLU B 185 -1 O TYR B 183 N ARG B 168 LINK SG CYS A 189 ZN ZN A 302 1555 1555 2.34 LINK ND1 HIS A 241 ZN ZN A 302 1555 1555 2.18 LINK SG CYS A 247 ZN ZN A 302 1555 1555 2.38 LINK SG CYS A 250 ZN ZN A 302 1555 1555 2.35 LINK SG CYS B 189 ZN ZN B 304 1555 1555 2.39 LINK ND1 HIS B 241 ZN ZN B 304 1555 1555 2.09 LINK SG CYS B 247 ZN ZN B 304 1555 1555 2.48 LINK SG CYS B 250 ZN ZN B 304 1555 1555 2.28 CISPEP 1 ARG A 35 PRO A 36 0 -0.21 CISPEP 2 LEU A 121 PRO A 122 0 -1.70 CISPEP 3 ARG B 35 PRO B 36 0 -6.86 CISPEP 4 LEU B 121 PRO B 122 0 -2.90 SITE 1 AC1 3 PHE A 31 GLY A 83 VAL A 84 SITE 1 AC2 4 CYS A 189 HIS A 241 CYS A 247 CYS A 250 SITE 1 AC3 3 HIS B 147 ALA B 194 ARG B 217 SITE 1 AC4 3 ARG A 32 GLN B 2 THR B 75 SITE 1 AC5 4 CYS B 189 HIS B 241 CYS B 247 CYS B 250 CRYST1 114.170 55.327 94.342 90.00 102.63 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008759 0.000000 0.001962 0.00000 SCALE2 0.000000 0.018074 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010862 0.00000