HEADER HYDROLASE 05-OCT-18 6MP2 TITLE CRYSTAL STRUCTURE OF BLMAN5B SOLVED BY SIRAS COMPND MOL_ID: 1; COMPND 2 MOLECULE: BLMAN5B; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BIFIDOBACTERIUM LONGUM DJO10A; SOURCE 3 ORGANISM_TAXID: 205913; SOURCE 4 STRAIN: DJO10A; SOURCE 5 GENE: BLD_0195; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS FAMILY GH5, SUBFAMILY 18, BETA-MANNOSIDASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR R.LORIZOLLA-CORDEIRO,P.O.GIUSEPPE,M.T.MURAKAMI REVDAT 4 13-MAR-24 6MP2 1 REMARK REVDAT 3 01-JAN-20 6MP2 1 REMARK REVDAT 2 27-FEB-19 6MP2 1 JRNL REVDAT 1 30-JAN-19 6MP2 0 JRNL AUTH R.L.CORDEIRO,R.A.S.PIROLLA,G.F.PERSINOTI,F.C.GOZZO, JRNL AUTH 2 P.O.DE GIUSEPPE,M.T.MURAKAMI JRNL TITL N-GLYCAN UTILIZATION BY BIFIDOBACTERIUM GUT SYMBIONTS JRNL TITL 2 INVOLVES A SPECIALIST BETA-MANNOSIDASE. JRNL REF J. MOL. BIOL. V. 431 732 2019 JRNL REFN ESSN 1089-8638 JRNL PMID 30641082 JRNL DOI 10.1016/J.JMB.2018.12.017 REMARK 2 REMARK 2 RESOLUTION. 1.98 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.98 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.85 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 92446 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.189 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 4528 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.8650 - 6.1476 0.99 3191 167 0.1480 0.1632 REMARK 3 2 6.1476 - 4.8810 1.00 3067 166 0.1385 0.1522 REMARK 3 3 4.8810 - 4.2644 1.00 3016 165 0.1123 0.1226 REMARK 3 4 4.2644 - 3.8747 1.00 3037 179 0.1210 0.1395 REMARK 3 5 3.8747 - 3.5970 1.00 3004 165 0.1417 0.1776 REMARK 3 6 3.5970 - 3.3850 1.00 2981 157 0.1517 0.1838 REMARK 3 7 3.3850 - 3.2155 1.00 3022 144 0.1616 0.1787 REMARK 3 8 3.2155 - 3.0756 1.00 2966 167 0.1714 0.1897 REMARK 3 9 3.0756 - 2.9572 1.00 2983 147 0.1722 0.1963 REMARK 3 10 2.9572 - 2.8552 1.00 2982 157 0.1712 0.2052 REMARK 3 11 2.8552 - 2.7659 1.00 2970 153 0.1674 0.1787 REMARK 3 12 2.7659 - 2.6868 1.00 2985 162 0.1624 0.1741 REMARK 3 13 2.6868 - 2.6161 1.00 2978 145 0.1661 0.2092 REMARK 3 14 2.6161 - 2.5523 1.00 2957 137 0.1757 0.2142 REMARK 3 15 2.5523 - 2.4943 1.00 2977 141 0.1713 0.2116 REMARK 3 16 2.4943 - 2.4412 1.00 2969 152 0.1746 0.2169 REMARK 3 17 2.4412 - 2.3924 0.99 2943 124 0.1790 0.2070 REMARK 3 18 2.3924 - 2.3472 0.99 2970 127 0.1862 0.2457 REMARK 3 19 2.3472 - 2.3053 0.99 2930 146 0.1800 0.2024 REMARK 3 20 2.3053 - 2.2662 0.99 2915 152 0.1919 0.2310 REMARK 3 21 2.2662 - 2.2297 0.98 2913 153 0.2120 0.2011 REMARK 3 22 2.2297 - 2.1954 0.97 2851 153 0.2064 0.2485 REMARK 3 23 2.1954 - 2.1631 0.97 2886 146 0.2219 0.2763 REMARK 3 24 2.1631 - 2.1326 0.98 2883 133 0.2403 0.2925 REMARK 3 25 2.1326 - 2.1038 0.96 2880 149 0.2523 0.2830 REMARK 3 26 2.1038 - 2.0765 0.97 2805 144 0.2615 0.2842 REMARK 3 27 2.0765 - 2.0505 0.95 2797 154 0.2913 0.3576 REMARK 3 28 2.0505 - 2.0258 0.93 2729 150 0.3172 0.3366 REMARK 3 29 2.0258 - 2.0022 0.93 2707 155 0.3500 0.3578 REMARK 3 30 2.0022 - 1.9797 0.89 2624 138 0.3689 0.3999 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.810 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 31.99 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.66 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 19:417 ) REMARK 3 ORIGIN FOR THE GROUP (A): 60.059 47.690 114.221 REMARK 3 T TENSOR REMARK 3 T11: 0.4341 T22: 0.3053 REMARK 3 T33: 0.2388 T12: -0.0144 REMARK 3 T13: -0.0043 T23: -0.0542 REMARK 3 L TENSOR REMARK 3 L11: 1.4694 L22: 0.9229 REMARK 3 L33: 1.6274 L12: 0.3748 REMARK 3 L13: -0.0311 L23: 0.2107 REMARK 3 S TENSOR REMARK 3 S11: -0.0026 S12: -0.0892 S13: 0.1108 REMARK 3 S21: 0.0323 S22: 0.0972 S23: -0.1849 REMARK 3 S31: -0.3533 S32: 0.3607 S33: -0.0966 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN B AND RESID 19:417 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.793 16.174 105.593 REMARK 3 T TENSOR REMARK 3 T11: 0.3377 T22: 0.2397 REMARK 3 T33: 0.1832 T12: 0.0435 REMARK 3 T13: 0.0063 T23: 0.0207 REMARK 3 L TENSOR REMARK 3 L11: 1.0670 L22: 0.8705 REMARK 3 L33: 1.5277 L12: 0.5208 REMARK 3 L13: 0.5312 L23: 0.4557 REMARK 3 S TENSOR REMARK 3 S11: 0.0262 S12: -0.0652 S13: -0.0403 REMARK 3 S21: 0.0124 S22: -0.0278 S23: 0.0759 REMARK 3 S31: 0.1520 S32: -0.2289 S33: -0.0001 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 19 THROUGH 42 OR REMARK 3 RESID 44 THROUGH 46 OR RESID 48 THROUGH REMARK 3 147 OR RESID 149 THROUGH 196 OR RESID 198 REMARK 3 THROUGH 248 OR RESID 250 THROUGH 296 OR REMARK 3 RESID 298 THROUGH 356 OR RESID 358 REMARK 3 THROUGH 437)) REMARK 3 SELECTION : (CHAIN B AND (RESID 19 THROUGH 42 OR REMARK 3 RESID 44 THROUGH 46 OR RESID 48 THROUGH REMARK 3 147 OR RESID 149 THROUGH 196 OR RESID 198 REMARK 3 THROUGH 248 OR RESID 250 THROUGH 296 OR REMARK 3 RESID 298 THROUGH 356 OR RESID 358 REMARK 3 THROUGH 437)) REMARK 3 ATOM PAIRS NUMBER : 3814 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6MP2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-OCT-18. REMARK 100 THE DEPOSITION ID IS D_1000237335. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-SEP-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : LNLS REMARK 200 BEAMLINE : W01B-MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.459 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 92510 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.980 REMARK 200 RESOLUTION RANGE LOW (A) : 48.850 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 4.974 REMARK 200 R MERGE (I) : 0.07600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.5100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.98 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.19 REMARK 200 R MERGE FOR SHELL (I) : 1.04900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.310 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: SHELX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.55 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM SODIUM CITRATE PH 4.5 AND 12 REMARK 280 -16% PEG 3000, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 273.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 38.28500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 85.79250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 50.95900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 85.79250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 38.28500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 50.95900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5310 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28840 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 ALA A 418 REMARK 465 VAL A 419 REMARK 465 SER A 420 REMARK 465 ASP A 421 REMARK 465 PRO A 422 REMARK 465 ALA A 423 REMARK 465 PHE A 424 REMARK 465 GLU A 425 REMARK 465 HIS A 426 REMARK 465 LYS A 427 REMARK 465 GLY A 428 REMARK 465 GLU A 429 REMARK 465 MET B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 465 GLY B -2 REMARK 465 ALA B 418 REMARK 465 VAL B 419 REMARK 465 SER B 420 REMARK 465 ASP B 421 REMARK 465 PRO B 422 REMARK 465 ALA B 423 REMARK 465 PHE B 424 REMARK 465 GLU B 425 REMARK 465 HIS B 426 REMARK 465 LYS B 427 REMARK 465 GLY B 428 REMARK 465 GLU B 429 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU B 181 CA - CB - CG ANGL. DEV. = 15.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 13 -151.16 56.05 REMARK 500 ASN A 19 76.88 -153.71 REMARK 500 SER A 89 -3.44 88.67 REMARK 500 SER A 99 -105.94 47.36 REMARK 500 ALA A 155 143.50 -172.65 REMARK 500 ALA A 260 79.37 -117.35 REMARK 500 HIS B 0 143.15 73.31 REMARK 500 TRP B 13 -152.20 58.74 REMARK 500 ASN B 19 76.68 -153.17 REMARK 500 SER B 89 -5.38 86.81 REMARK 500 SER B 99 -103.39 45.02 REMARK 500 ALA B 155 142.06 -174.89 REMARK 500 ALA B 260 78.70 -117.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 504 DBREF 6MP2 A 1 429 UNP B3DQP5 B3DQP5_BIFLD 1 429 DBREF 6MP2 B 1 429 UNP B3DQP5 B3DQP5_BIFLD 1 429 SEQADV 6MP2 MET A -19 UNP B3DQP5 INITIATING METHIONINE SEQADV 6MP2 GLY A -18 UNP B3DQP5 EXPRESSION TAG SEQADV 6MP2 SER A -17 UNP B3DQP5 EXPRESSION TAG SEQADV 6MP2 SER A -16 UNP B3DQP5 EXPRESSION TAG SEQADV 6MP2 HIS A -15 UNP B3DQP5 EXPRESSION TAG SEQADV 6MP2 HIS A -14 UNP B3DQP5 EXPRESSION TAG SEQADV 6MP2 HIS A -13 UNP B3DQP5 EXPRESSION TAG SEQADV 6MP2 HIS A -12 UNP B3DQP5 EXPRESSION TAG SEQADV 6MP2 HIS A -11 UNP B3DQP5 EXPRESSION TAG SEQADV 6MP2 HIS A -10 UNP B3DQP5 EXPRESSION TAG SEQADV 6MP2 SER A -9 UNP B3DQP5 EXPRESSION TAG SEQADV 6MP2 SER A -8 UNP B3DQP5 EXPRESSION TAG SEQADV 6MP2 GLY A -7 UNP B3DQP5 EXPRESSION TAG SEQADV 6MP2 LEU A -6 UNP B3DQP5 EXPRESSION TAG SEQADV 6MP2 VAL A -5 UNP B3DQP5 EXPRESSION TAG SEQADV 6MP2 PRO A -4 UNP B3DQP5 EXPRESSION TAG SEQADV 6MP2 ARG A -3 UNP B3DQP5 EXPRESSION TAG SEQADV 6MP2 GLY A -2 UNP B3DQP5 EXPRESSION TAG SEQADV 6MP2 SER A -1 UNP B3DQP5 EXPRESSION TAG SEQADV 6MP2 HIS A 0 UNP B3DQP5 EXPRESSION TAG SEQADV 6MP2 MET B -19 UNP B3DQP5 INITIATING METHIONINE SEQADV 6MP2 GLY B -18 UNP B3DQP5 EXPRESSION TAG SEQADV 6MP2 SER B -17 UNP B3DQP5 EXPRESSION TAG SEQADV 6MP2 SER B -16 UNP B3DQP5 EXPRESSION TAG SEQADV 6MP2 HIS B -15 UNP B3DQP5 EXPRESSION TAG SEQADV 6MP2 HIS B -14 UNP B3DQP5 EXPRESSION TAG SEQADV 6MP2 HIS B -13 UNP B3DQP5 EXPRESSION TAG SEQADV 6MP2 HIS B -12 UNP B3DQP5 EXPRESSION TAG SEQADV 6MP2 HIS B -11 UNP B3DQP5 EXPRESSION TAG SEQADV 6MP2 HIS B -10 UNP B3DQP5 EXPRESSION TAG SEQADV 6MP2 SER B -9 UNP B3DQP5 EXPRESSION TAG SEQADV 6MP2 SER B -8 UNP B3DQP5 EXPRESSION TAG SEQADV 6MP2 GLY B -7 UNP B3DQP5 EXPRESSION TAG SEQADV 6MP2 LEU B -6 UNP B3DQP5 EXPRESSION TAG SEQADV 6MP2 VAL B -5 UNP B3DQP5 EXPRESSION TAG SEQADV 6MP2 PRO B -4 UNP B3DQP5 EXPRESSION TAG SEQADV 6MP2 ARG B -3 UNP B3DQP5 EXPRESSION TAG SEQADV 6MP2 GLY B -2 UNP B3DQP5 EXPRESSION TAG SEQADV 6MP2 SER B -1 UNP B3DQP5 EXPRESSION TAG SEQADV 6MP2 HIS B 0 UNP B3DQP5 EXPRESSION TAG SEQRES 1 A 449 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 449 LEU VAL PRO ARG GLY SER HIS MET LYS PHE GLY VAL ASN SEQRES 3 A 449 TYR THR PRO SER GLY GLU TRP PHE TYR THR TRP LEU ASN SEQRES 4 A 449 PRO LYS TRP GLU VAL ILE ARG ARG ASP LEU ALA GLN ILE SEQRES 5 A 449 ALA GLU LEU GLY ALA ASP HIS VAL ARG ILE PHE PRO LEU SEQRES 6 A 449 TRP THR LEU LEU GLN PRO ASN ARG THR TRP ILE ASN PRO SEQRES 7 A 449 LYS ALA LEU ALA ASP VAL ARG ARG MET VAL GLU LEU GLY SEQRES 8 A 449 GLY GLU ALA GLY LEU ASP VAL TYR VAL ASP VAL ILE GLN SEQRES 9 A 449 GLY HIS LEU SER SER PHE ASP PHE VAL PRO SER TRP LEU SEQRES 10 A 449 VAL SER TRP HIS GLU GLY SER MET PHE THR ASP GLN SER SEQRES 11 A 449 ALA ILE GLU ALA GLN SER ALA LEU THR GLU ALA ILE TYR SEQRES 12 A 449 GLY THR LEU SER ASP MET LYS ALA PHE ALA GLY LEU THR SEQRES 13 A 449 LEU GLY ASN GLU CYS ASN GLN PHE THR ASP ALA THR HIS SEQRES 14 A 449 PRO ARG ARG MET PRO ALA ASN ALA GLU GLN ILE GLY GLU SEQRES 15 A 449 TRP LEU ASP THR LEU ILE GLY LEU VAL ALA LYS ARG CYS SEQRES 16 A 449 ARG ARG ASP GLY ARG LEU ILE ALA HIS SER GLU ASN ASP SEQRES 17 A 449 ALA ILE TRP TYR ALA ASP GLY HIS ALA PHE LEU PRO ARG SEQRES 18 A 449 TYR ALA SER CYS LYS GLY ASP VAL THR THR VAL HIS SER SEQRES 19 A 449 TRP VAL PHE ASN GLY THR GLY GLN HIS TYR GLY PRO MET SEQRES 20 A 449 SER CYS GLU SER LEU GLY HIS ALA ALA TRP LEU VAL GLU SEQRES 21 A 449 LEU SER LYS ALA PHE ALA ALA ASP PRO HIS ARG PRO VAL SEQRES 22 A 449 TRP VAL GLN GLU ILE GLY ALA PRO GLY ASN VAL ILE ASP SEQRES 23 A 449 SER ALA ASP ALA PRO GLU PHE CYS ARG ARG SER ILE ASP SEQRES 24 A 449 ALA ILE ALA ASP CYS PRO ASP VAL PHE GLY VAL THR TRP SEQRES 25 A 449 TRP CYS SER HIS ARG ILE PRO SER ALA PHE SER ASP PHE SEQRES 26 A 449 PRO PHE PHE GLU HIS GLN LEU GLY LEU PHE ASP VAL ASP SEQRES 27 A 449 GLY THR LEU THR ASP VAL GLY LYS ALA PHE ARG ASP ALA SEQRES 28 A 449 ILE ALA THR HIS ARG ASP THR VAL ALA PRO PRO ARG THR SEQRES 29 A 449 THR ALA ILE VAL ILE PRO VAL ASP GLU GLN GLY ASP PRO SEQRES 30 A 449 LEU MET ARG ALA ALA GLN ALA PRO GLY GLY SER LEU PHE SEQRES 31 A 449 GLU ALA TRP ALA ASN LEU ASN ARG GLN GLY GLU ARG PRO SEQRES 32 A 449 CYS VAL ILE THR SER LEU ASP ALA GLY ASN PRO ALA LYS SEQRES 33 A 449 LEU ALA ASN ARG GLY ILE VAL ARG LEU GLU ARG VAL GLU SEQRES 34 A 449 LEU VAL ALA GLY HIS ALA TYR ASN ALA VAL SER ASP PRO SEQRES 35 A 449 ALA PHE GLU HIS LYS GLY GLU SEQRES 1 B 449 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 449 LEU VAL PRO ARG GLY SER HIS MET LYS PHE GLY VAL ASN SEQRES 3 B 449 TYR THR PRO SER GLY GLU TRP PHE TYR THR TRP LEU ASN SEQRES 4 B 449 PRO LYS TRP GLU VAL ILE ARG ARG ASP LEU ALA GLN ILE SEQRES 5 B 449 ALA GLU LEU GLY ALA ASP HIS VAL ARG ILE PHE PRO LEU SEQRES 6 B 449 TRP THR LEU LEU GLN PRO ASN ARG THR TRP ILE ASN PRO SEQRES 7 B 449 LYS ALA LEU ALA ASP VAL ARG ARG MET VAL GLU LEU GLY SEQRES 8 B 449 GLY GLU ALA GLY LEU ASP VAL TYR VAL ASP VAL ILE GLN SEQRES 9 B 449 GLY HIS LEU SER SER PHE ASP PHE VAL PRO SER TRP LEU SEQRES 10 B 449 VAL SER TRP HIS GLU GLY SER MET PHE THR ASP GLN SER SEQRES 11 B 449 ALA ILE GLU ALA GLN SER ALA LEU THR GLU ALA ILE TYR SEQRES 12 B 449 GLY THR LEU SER ASP MET LYS ALA PHE ALA GLY LEU THR SEQRES 13 B 449 LEU GLY ASN GLU CYS ASN GLN PHE THR ASP ALA THR HIS SEQRES 14 B 449 PRO ARG ARG MET PRO ALA ASN ALA GLU GLN ILE GLY GLU SEQRES 15 B 449 TRP LEU ASP THR LEU ILE GLY LEU VAL ALA LYS ARG CYS SEQRES 16 B 449 ARG ARG ASP GLY ARG LEU ILE ALA HIS SER GLU ASN ASP SEQRES 17 B 449 ALA ILE TRP TYR ALA ASP GLY HIS ALA PHE LEU PRO ARG SEQRES 18 B 449 TYR ALA SER CYS LYS GLY ASP VAL THR THR VAL HIS SER SEQRES 19 B 449 TRP VAL PHE ASN GLY THR GLY GLN HIS TYR GLY PRO MET SEQRES 20 B 449 SER CYS GLU SER LEU GLY HIS ALA ALA TRP LEU VAL GLU SEQRES 21 B 449 LEU SER LYS ALA PHE ALA ALA ASP PRO HIS ARG PRO VAL SEQRES 22 B 449 TRP VAL GLN GLU ILE GLY ALA PRO GLY ASN VAL ILE ASP SEQRES 23 B 449 SER ALA ASP ALA PRO GLU PHE CYS ARG ARG SER ILE ASP SEQRES 24 B 449 ALA ILE ALA ASP CYS PRO ASP VAL PHE GLY VAL THR TRP SEQRES 25 B 449 TRP CYS SER HIS ARG ILE PRO SER ALA PHE SER ASP PHE SEQRES 26 B 449 PRO PHE PHE GLU HIS GLN LEU GLY LEU PHE ASP VAL ASP SEQRES 27 B 449 GLY THR LEU THR ASP VAL GLY LYS ALA PHE ARG ASP ALA SEQRES 28 B 449 ILE ALA THR HIS ARG ASP THR VAL ALA PRO PRO ARG THR SEQRES 29 B 449 THR ALA ILE VAL ILE PRO VAL ASP GLU GLN GLY ASP PRO SEQRES 30 B 449 LEU MET ARG ALA ALA GLN ALA PRO GLY GLY SER LEU PHE SEQRES 31 B 449 GLU ALA TRP ALA ASN LEU ASN ARG GLN GLY GLU ARG PRO SEQRES 32 B 449 CYS VAL ILE THR SER LEU ASP ALA GLY ASN PRO ALA LYS SEQRES 33 B 449 LEU ALA ASN ARG GLY ILE VAL ARG LEU GLU ARG VAL GLU SEQRES 34 B 449 LEU VAL ALA GLY HIS ALA TYR ASN ALA VAL SER ASP PRO SEQRES 35 B 449 ALA PHE GLU HIS LYS GLY GLU HET GOL A 501 6 HET GOL A 502 6 HET GOL A 503 6 HET GOL A 504 6 HET GOL B 501 6 HET GOL B 502 6 HET GOL B 503 6 HET GOL B 504 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL 8(C3 H8 O3) FORMUL 11 HOH *548(H2 O) HELIX 1 AA1 GLU A 12 ASN A 19 5 8 HELIX 2 AA2 LYS A 21 LEU A 35 1 15 HELIX 3 AA3 LEU A 45 GLN A 50 1 6 HELIX 4 AA4 ASN A 57 ALA A 74 1 18 HELIX 5 AA5 PRO A 94 GLU A 102 5 9 HELIX 6 AA6 ASP A 108 SER A 127 1 20 HELIX 7 AA7 GLU A 140 THR A 145 5 6 HELIX 8 AA8 ASN A 156 GLY A 179 1 24 HELIX 9 AA9 ASP A 188 ALA A 193 1 6 HELIX 10 AB1 LEU A 199 LYS A 206 1 8 HELIX 11 AB2 GLY A 219 GLY A 225 1 7 HELIX 12 AB3 SER A 228 GLY A 233 1 6 HELIX 13 AB4 GLY A 233 PHE A 245 1 13 HELIX 14 AB5 ASP A 269 ASP A 283 1 15 HELIX 15 AB6 PRO A 306 LEU A 312 1 7 HELIX 16 AB7 THR A 322 HIS A 335 1 14 HELIX 17 AB8 MET A 359 ALA A 364 5 6 HELIX 18 AB9 GLY A 367 GLN A 379 1 13 HELIX 19 AC1 SER A 388 GLY A 392 1 5 HELIX 20 AC2 ASN A 393 GLY A 401 1 9 HELIX 21 AC3 GLU B 12 ASN B 19 5 8 HELIX 22 AC4 LYS B 21 LEU B 35 1 15 HELIX 23 AC5 LEU B 45 GLN B 50 1 6 HELIX 24 AC6 ASN B 57 ALA B 74 1 18 HELIX 25 AC7 PRO B 94 GLU B 102 5 9 HELIX 26 AC8 ASP B 108 SER B 127 1 20 HELIX 27 AC9 GLU B 140 THR B 145 5 6 HELIX 28 AD1 ASN B 156 GLY B 179 1 24 HELIX 29 AD2 ASP B 188 ALA B 193 1 6 HELIX 30 AD3 LEU B 199 LYS B 206 1 8 HELIX 31 AD4 GLY B 219 GLY B 225 1 7 HELIX 32 AD5 SER B 228 GLY B 233 1 6 HELIX 33 AD6 GLY B 233 PHE B 245 1 13 HELIX 34 AD7 ASP B 269 ASP B 283 1 15 HELIX 35 AD8 PRO B 306 LEU B 312 1 7 HELIX 36 AD9 THR B 322 HIS B 335 1 14 HELIX 37 AE1 MET B 359 ALA B 364 5 6 HELIX 38 AE2 GLY B 367A GLN B 379 1 13 HELIX 39 AE3 SER B 388 GLY B 392 1 5 HELIX 40 AE4 ASN B 393 GLY B 401 1 9 SHEET 1 AA1 8 LEU A 181 ALA A 183 0 SHEET 2 AA1 8 PHE A 132 THR A 136 1 N LEU A 135 O LEU A 181 SHEET 3 AA1 8 ASP A 77 ASP A 81 1 N VAL A 78 O ALA A 133 SHEET 4 AA1 8 HIS A 39 ILE A 42 1 N VAL A 40 O TYR A 79 SHEET 5 AA1 8 LYS A 2 ASN A 6 1 N VAL A 5 O ARG A 41 SHEET 6 AA1 8 VAL A 287 TRP A 292 1 O TRP A 292 N ASN A 6 SHEET 7 AA1 8 VAL A 253 ILE A 258 1 N VAL A 255 O THR A 291 SHEET 8 AA1 8 THR A 210 SER A 214 1 N THR A 210 O TRP A 254 SHEET 1 AA2 2 HIS A 86 LEU A 87 0 SHEET 2 AA2 2 PHE A 90 ASP A 91 -1 O PHE A 90 N LEU A 87 SHEET 1 AA3 3 PRO A 383 THR A 387 0 SHEET 2 AA3 3 THR A 345 ILE A 349 1 N THR A 345 O CYS A 384 SHEET 3 AA3 3 ARG A 404 GLU A 406 1 O ARG A 404 N ALA A 346 SHEET 1 AA4 8 LEU B 181 ALA B 183 0 SHEET 2 AA4 8 PHE B 132 THR B 136 1 N LEU B 135 O LEU B 181 SHEET 3 AA4 8 ASP B 77 ASP B 81 1 N VAL B 78 O ALA B 133 SHEET 4 AA4 8 HIS B 39 ILE B 42 1 N VAL B 40 O TYR B 79 SHEET 5 AA4 8 LYS B 2 ASN B 6 1 N VAL B 5 O ARG B 41 SHEET 6 AA4 8 VAL B 287 TRP B 292 1 O TRP B 292 N ASN B 6 SHEET 7 AA4 8 VAL B 253 ILE B 258 1 N VAL B 255 O GLY B 289 SHEET 8 AA4 8 THR B 210 SER B 214 1 N THR B 210 O TRP B 254 SHEET 1 AA5 2 HIS B 86 LEU B 87 0 SHEET 2 AA5 2 PHE B 90 ASP B 91 -1 O PHE B 90 N LEU B 87 SHEET 1 AA6 3 CYS B 384 THR B 387 0 SHEET 2 AA6 3 THR B 345 ILE B 349 1 N THR B 345 O CYS B 384 SHEET 3 AA6 3 ARG B 404 GLU B 406 1 O GLU B 406 N ALA B 346 CISPEP 1 GLN A 84 GLY A 85 0 4.76 CISPEP 2 TRP A 293 CYS A 294 0 9.21 CISPEP 3 GLN B 84 GLY B 85 0 5.71 CISPEP 4 TRP B 293 CYS B 294 0 8.88 SITE 1 AC1 8 LEU A 87 SER A 88 ASN A 139 GLU A 140 SITE 2 AC1 8 GLU A 257 TRP A 293 GLU A 309 HOH A 657 SITE 1 AC2 7 ASP A 194 GLY A 195 ASP A 356 PRO A 357 SITE 2 AC2 7 ARG A 360 HOH A 728 ARG B 407 SITE 1 AC3 5 TRP A 100 HOH A 639 HOH A 700 HIS B 86 SITE 2 AC3 5 SER B 89 SITE 1 AC4 4 GLU A 158 GLY A 161 ASP A 165 LYS A 206 SITE 1 AC5 6 SER B 88 ASN B 139 GLU B 140 GLU B 257 SITE 2 AC5 6 TRP B 293 GLU B 309 SITE 1 AC6 5 GLU B 158 GLY B 161 ASP B 165 LYS B 206 SITE 2 AC6 5 HOH B 676 SITE 1 AC7 9 MET B 1 ALA B 282 CYS B 284 PRO B 285 SITE 2 AC7 9 ASP B 286 VAL B 287 THR B 338 VAL B 339 SITE 3 AC7 9 ALA B 340 SITE 1 AC8 6 ASP B 194 GLY B 195 ASP B 356 PRO B 357 SITE 2 AC8 6 ARG B 360 HOH B 666 CRYST1 76.570 101.918 171.585 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013060 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009812 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005828 0.00000