HEADER HYDROLASE 09-OCT-18 6MQ4 TITLE GH5-4 BROAD SPECIFICITY ENDOGLUCANASE FROM HUNGATEICLOSTRIDIUM TITLE 2 CELLULOLYTICUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: CELLULASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUNGATEICLOSTRIDIUM CELLULOLYTICUM; SOURCE 3 ORGANISM_TAXID: 35830; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: ROSETTA (DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PVP67K KEYWDS CELLULASE, XYLANASE, MANGANESE, GH5, ENDOGLUCANASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR C.A.BINGMAN,R.W.SMITH,E.M.GLASGOW,B.G.FOX REVDAT 5 11-OCT-23 6MQ4 1 REMARK REVDAT 4 17-FEB-21 6MQ4 1 JRNL REVDAT 3 21-OCT-20 6MQ4 1 TITLE REMARK REVDAT 2 04-DEC-19 6MQ4 1 REMARK REVDAT 1 13-NOV-19 6MQ4 0 JRNL AUTH E.M.GLASGOW,E.I.KEMNA,C.A.BINGMAN,N.ING,K.DENG, JRNL AUTH 2 C.M.BIANCHETTI,T.E.TAKASUKA,T.R.NORTHEN,B.G.FOX JRNL TITL A STRUCTURAL AND KINETIC SURVEY OF GH5_4 ENDOGLUCANASES JRNL TITL 2 REVEALS DETERMINANTS OF BROAD SUBSTRATE SPECIFICITY AND JRNL TITL 3 OPPORTUNITIES FOR BIOMASS HYDROLYSIS. JRNL REF J.BIOL.CHEM. V. 295 17752 2020 JRNL REFN ESSN 1083-351X JRNL PMID 33454012 JRNL DOI 10.1074/JBC.RA120.015328 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.14_3211: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.18 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.990 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 63716 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.121 REMARK 3 R VALUE (WORKING SET) : 0.121 REMARK 3 FREE R VALUE : 0.138 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.340 REMARK 3 FREE R VALUE TEST SET COUNT : 1490 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 30.1834 - 3.1126 1.00 5659 132 0.1322 0.1365 REMARK 3 2 3.1126 - 2.4709 1.00 5635 136 0.1205 0.1329 REMARK 3 3 2.4709 - 2.1587 1.00 5659 130 0.1066 0.1243 REMARK 3 4 2.1587 - 1.9614 1.00 5660 134 0.1056 0.1385 REMARK 3 5 1.9614 - 1.8208 1.00 5656 132 0.1084 0.1348 REMARK 3 6 1.8208 - 1.7134 1.00 5692 138 0.1051 0.1116 REMARK 3 7 1.7134 - 1.6276 1.00 5647 136 0.1120 0.1384 REMARK 3 8 1.6276 - 1.5568 1.00 5656 134 0.1202 0.1469 REMARK 3 9 1.5568 - 1.4969 1.00 5628 142 0.1316 0.1624 REMARK 3 10 1.4969 - 1.4452 1.00 5682 134 0.1494 0.1633 REMARK 3 11 1.4452 - 1.4000 1.00 5652 142 0.1661 0.2070 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.100 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 12.610 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 3005 REMARK 3 ANGLE : 1.174 4085 REMARK 3 CHIRALITY : 0.085 446 REMARK 3 PLANARITY : 0.008 518 REMARK 3 DIHEDRAL : 14.083 1092 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 32 THROUGH 56 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.0163 6.5642 -1.6267 REMARK 3 T TENSOR REMARK 3 T11: 0.0893 T22: 0.0762 REMARK 3 T33: 0.0689 T12: -0.0213 REMARK 3 T13: -0.0011 T23: 0.0188 REMARK 3 L TENSOR REMARK 3 L11: 0.2371 L22: 0.1878 REMARK 3 L33: 0.0546 L12: -0.0599 REMARK 3 L13: 0.0640 L23: 0.0391 REMARK 3 S TENSOR REMARK 3 S11: -0.0218 S12: 0.0808 S13: 0.1035 REMARK 3 S21: -0.0928 S22: 0.0060 S23: 0.0022 REMARK 3 S31: -0.0567 S32: 0.0578 S33: 0.0055 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 57 THROUGH 92 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.7223 -14.9290 -2.6047 REMARK 3 T TENSOR REMARK 3 T11: 0.0888 T22: 0.0741 REMARK 3 T33: 0.0622 T12: -0.0181 REMARK 3 T13: -0.0004 T23: -0.0031 REMARK 3 L TENSOR REMARK 3 L11: 0.1708 L22: 0.3288 REMARK 3 L33: 0.2330 L12: 0.0505 REMARK 3 L13: 0.0731 L23: 0.0308 REMARK 3 S TENSOR REMARK 3 S11: -0.0050 S12: 0.0779 S13: -0.0572 REMARK 3 S21: -0.0595 S22: 0.0234 S23: -0.0557 REMARK 3 S31: 0.0518 S32: 0.0286 S33: -0.0165 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 93 THROUGH 133 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.6529 -9.8509 6.7985 REMARK 3 T TENSOR REMARK 3 T11: 0.0564 T22: 0.0630 REMARK 3 T33: 0.0335 T12: -0.0131 REMARK 3 T13: -0.0045 T23: 0.0082 REMARK 3 L TENSOR REMARK 3 L11: 0.1912 L22: 0.2421 REMARK 3 L33: 0.0990 L12: -0.0660 REMARK 3 L13: 0.0421 L23: 0.1090 REMARK 3 S TENSOR REMARK 3 S11: 0.0071 S12: -0.0715 S13: -0.0215 REMARK 3 S21: 0.0229 S22: -0.0055 S23: 0.0009 REMARK 3 S31: 0.0355 S32: 0.0175 S33: 0.2449 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 134 THROUGH 173 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.3669 -4.8344 12.7134 REMARK 3 T TENSOR REMARK 3 T11: 0.0498 T22: 0.0835 REMARK 3 T33: 0.0584 T12: -0.0112 REMARK 3 T13: 0.0052 T23: 0.0034 REMARK 3 L TENSOR REMARK 3 L11: 0.1004 L22: 0.1713 REMARK 3 L33: 0.0759 L12: 0.0229 REMARK 3 L13: 0.0846 L23: -0.0176 REMARK 3 S TENSOR REMARK 3 S11: 0.0271 S12: -0.0711 S13: 0.0146 REMARK 3 S21: 0.0261 S22: -0.0175 S23: 0.0591 REMARK 3 S31: -0.0035 S32: -0.0350 S33: 0.0831 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 174 THROUGH 202 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.3996 -1.5537 6.5207 REMARK 3 T TENSOR REMARK 3 T11: 0.0423 T22: 0.0496 REMARK 3 T33: 0.0451 T12: -0.0088 REMARK 3 T13: -0.0009 T23: 0.0115 REMARK 3 L TENSOR REMARK 3 L11: 0.0813 L22: 0.2395 REMARK 3 L33: 0.4460 L12: -0.0912 REMARK 3 L13: 0.0540 L23: 0.0428 REMARK 3 S TENSOR REMARK 3 S11: -0.0404 S12: -0.0022 S13: 0.0154 REMARK 3 S21: 0.0114 S22: 0.0181 S23: 0.0717 REMARK 3 S31: -0.0099 S32: -0.0725 S33: -0.3446 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 203 THROUGH 242 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.8013 4.3756 11.6336 REMARK 3 T TENSOR REMARK 3 T11: 0.0574 T22: 0.0715 REMARK 3 T33: 0.0963 T12: -0.0087 REMARK 3 T13: 0.0146 T23: -0.0087 REMARK 3 L TENSOR REMARK 3 L11: 0.1566 L22: 0.2328 REMARK 3 L33: 0.4088 L12: -0.0518 REMARK 3 L13: -0.1093 L23: -0.2082 REMARK 3 S TENSOR REMARK 3 S11: 0.0458 S12: -0.0466 S13: 0.1830 REMARK 3 S21: 0.0679 S22: -0.0099 S23: 0.1001 REMARK 3 S31: -0.0805 S32: 0.0265 S33: 0.0056 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 243 THROUGH 272 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.2748 5.2546 1.1292 REMARK 3 T TENSOR REMARK 3 T11: 0.0818 T22: 0.0918 REMARK 3 T33: 0.1783 T12: 0.0081 REMARK 3 T13: -0.0243 T23: 0.0109 REMARK 3 L TENSOR REMARK 3 L11: 0.3065 L22: 0.2632 REMARK 3 L33: 0.6057 L12: 0.1747 REMARK 3 L13: -0.0008 L23: -0.0200 REMARK 3 S TENSOR REMARK 3 S11: 0.0284 S12: -0.0095 S13: 0.2029 REMARK 3 S21: -0.0370 S22: -0.0293 S23: 0.2487 REMARK 3 S31: -0.0992 S32: -0.1847 S33: 0.1404 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 273 THROUGH 299 ) REMARK 3 ORIGIN FOR THE GROUP (A): -35.6302 4.5842 -13.6278 REMARK 3 T TENSOR REMARK 3 T11: 0.1857 T22: 0.2078 REMARK 3 T33: 0.2817 T12: 0.0348 REMARK 3 T13: -0.1281 T23: 0.0479 REMARK 3 L TENSOR REMARK 3 L11: 0.1669 L22: 0.1721 REMARK 3 L33: 0.1454 L12: 0.1008 REMARK 3 L13: -0.0199 L23: 0.1168 REMARK 3 S TENSOR REMARK 3 S11: 0.0235 S12: 0.2398 S13: 0.0768 REMARK 3 S21: -0.1900 S22: -0.0335 S23: 0.1252 REMARK 3 S31: -0.0249 S32: -0.1046 S33: -0.1007 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 300 THROUGH 319 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.4640 3.5309 -6.8885 REMARK 3 T TENSOR REMARK 3 T11: 0.1242 T22: 0.1071 REMARK 3 T33: 0.1266 T12: -0.0017 REMARK 3 T13: -0.0495 T23: 0.0254 REMARK 3 L TENSOR REMARK 3 L11: 0.4318 L22: 0.0170 REMARK 3 L33: 0.6229 L12: -0.0628 REMARK 3 L13: -0.1668 L23: 0.0708 REMARK 3 S TENSOR REMARK 3 S11: 0.0175 S12: 0.1013 S13: 0.1331 REMARK 3 S21: -0.2291 S22: -0.0138 S23: 0.1623 REMARK 3 S31: -0.1480 S32: -0.1355 S33: 0.1686 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 320 THROUGH 337 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.8929 4.0320 -17.6502 REMARK 3 T TENSOR REMARK 3 T11: 0.2524 T22: 0.1446 REMARK 3 T33: 0.0848 T12: -0.0271 REMARK 3 T13: -0.1648 T23: 0.1252 REMARK 3 L TENSOR REMARK 3 L11: 0.0184 L22: 0.0926 REMARK 3 L33: 0.0903 L12: -0.0033 REMARK 3 L13: -0.0309 L23: 0.0620 REMARK 3 S TENSOR REMARK 3 S11: 0.0214 S12: 0.0953 S13: 0.0477 REMARK 3 S21: -0.1334 S22: -0.0197 S23: 0.0252 REMARK 3 S31: -0.0644 S32: -0.0582 S33: 0.0872 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 338 THROUGH 381 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.2677 -8.1260 -14.0411 REMARK 3 T TENSOR REMARK 3 T11: 0.1596 T22: 0.1162 REMARK 3 T33: 0.0613 T12: -0.0381 REMARK 3 T13: -0.0318 T23: -0.0013 REMARK 3 L TENSOR REMARK 3 L11: 0.4119 L22: 0.5342 REMARK 3 L33: 0.2831 L12: -0.0691 REMARK 3 L13: -0.2395 L23: 0.3031 REMARK 3 S TENSOR REMARK 3 S11: -0.0721 S12: 0.2208 S13: 0.0259 REMARK 3 S21: -0.4082 S22: 0.0860 S23: 0.0589 REMARK 3 S31: -0.0463 S32: -0.0149 S33: 0.2172 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6MQ4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-OCT-18. REMARK 100 THE DEPOSITION ID IS D_1000237356. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-AUG-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97857 REMARK 200 MONOCHROMATOR : DIAMOND (111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 63716 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 30.176 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.05344 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.45 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.90 REMARK 200 R MERGE FOR SHELL (I) : 0.42280 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2WAB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.21 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: A SOLUTION OF PROTEIN AT 1MM WAS REMARK 280 INCUBATED WITH 5MM CELLOHEXOSE FOR 4 HOURS AT ROOM TEMPERATURE. REMARK 280 THE MIXTURE WAS SCREENED USING A TTP LABTECH MOSQUITO AND MRC SD- REMARK 280 2 PLATES 200 NL PROTEIN 200 NL RESERVOIR, 50 MICROLITER TOTAL REMARK 280 RESERVOIR. CRYSTALS FORMED IN CONDITION B6, 40% ETHANOL, 10% REMARK 280 PEG1000, 0.1M PHOSPHATE CITRATE BUFFER PH 4.2. CRYSTALS WERE REMARK 280 EXPOSED TO VAPOR FROM 45% ETHANOL FOR 30 SECONDS PRIOR TO PLUNGE REMARK 280 COOLING IN LIQUID NITROGEN., VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 19.20333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 38.40667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 TYR A 382 REMARK 465 THR A 383 REMARK 465 VAL A 384 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 THR A 147 N CA C O CB OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH TYR A 113 O HOH A 505 1.59 REMARK 500 O GLY A 225 O HOH A 501 2.13 REMARK 500 O HOH A 541 O HOH A 673 2.15 REMARK 500 O4 PEG A 402 O HOH A 502 2.18 REMARK 500 O HOH A 798 O HOH A 876 2.18 REMARK 500 O HOH A 873 O HOH A 918 2.18 REMARK 500 O HOH A 889 O HOH A 903 2.18 REMARK 500 O HOH A 810 O HOH A 927 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU A 157 OG SER A 321 1556 2.11 REMARK 500 O HOH A 772 O HOH A 912 2455 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 51 -64.14 65.62 REMARK 500 THR A 59 -95.37 -128.17 REMARK 500 TYR A 64 -78.08 -141.56 REMARK 500 HIS A 142 -103.94 -113.02 REMARK 500 THR A 147 -59.70 -120.19 REMARK 500 ASN A 187 -78.45 -99.37 REMARK 500 ALA A 238 18.85 56.38 REMARK 500 THR A 277 72.23 42.75 REMARK 500 PHE A 300 -62.03 -109.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 945 DISTANCE = 5.91 ANGSTROMS REMARK 525 HOH A 946 DISTANCE = 5.96 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PG4 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGE A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGE A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGE A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGE A 409 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4IM4 RELATED DB: PDB REMARK 900 RELATED ID: 6XRK RELATED DB: PDB REMARK 900 RELATED ID: 6PZ7 RELATED DB: PDB REMARK 900 RELATED ID: 6Q1I RELATED DB: PDB REMARK 900 RELATED ID: 6UI3 RELATED DB: PDB REMARK 900 RELATED ID: 6WQP RELATED DB: PDB REMARK 900 RELATED ID: 6WQY RELATED DB: PDB REMARK 900 RELATED ID: 6XSO RELATED DB: PDB REMARK 900 RELATED ID: 6XSU RELATED DB: PDB DBREF 6MQ4 A 32 384 PDB 6MQ4 6MQ4 32 384 SEQRES 1 A 353 SER VAL ALA LYS THR GLY MET ARG ASP ILE THR ALA LEU SEQRES 2 A 353 GLU LEU THR LYS ASP MET ARG LEU GLY TRP SER LEU GLY SEQRES 3 A 353 ASN THR MET ASP ALA TYR TYR SER ALA ALA SER GLY LEU SEQRES 4 A 353 ALA THR GLU THR CYS TRP GLY ASN PRO LYS THR THR LYS SEQRES 5 A 353 ALA MET ILE ASP LYS VAL LYS GLU ALA GLY PHE ASN THR SEQRES 6 A 353 VAL ARG ILE PRO ILE THR TRP ALA GLY HIS PHE GLY SER SEQRES 7 A 353 ALA PRO ASN TYR THR ILE ASP SER ALA TRP LEU SER ARG SEQRES 8 A 353 VAL GLU GLU ILE VAL ASN TYR VAL LEU ASP ASN ASP MET SEQRES 9 A 353 TYR ALA ILE ILE ASN LEU HIS HIS GLU GLU ASN THR TRP SEQRES 10 A 353 LEU VAL PRO THR TYR ALA ASN GLN GLU VAL ALA THR ALA SEQRES 11 A 353 GLN ILE THR LYS LEU TRP GLU GLN ILE ALA THR ARG PHE SEQRES 12 A 353 LYS ASP TYR SER ASP TYR LEU ILE PHE GLU ALA MET ASN SEQRES 13 A 353 GLU PRO ARG VAL VAL GLY GLY SER ALA GLU TRP THR GLY SEQRES 14 A 353 GLY THR ALA GLU ASN ARG ALA VAL ILE ASN SER LEU SER SEQRES 15 A 353 LEU ALA ALA VAL ASN THR ILE ARG ALA THR GLY GLY ASN SEQRES 16 A 353 ASN GLU LYS ARG PHE LEU MET VAL PRO THR HIS ALA ALA SEQRES 17 A 353 CYS SER LEU THR ASP ALA VAL ASN ASP LEU VAL ILE PRO SEQRES 18 A 353 ASN ASN ASP SER LYS ILE ILE VAL SER LEU HIS MET TYR SEQRES 19 A 353 SER PRO TYR TYR PHE ALA MET VAL SER ASN SER THR PRO SEQRES 20 A 353 THR TRP GLY THR ASP SER ASP LYS SER SER LEU SER TYR SEQRES 21 A 353 GLU LEU ASP ALA VAL TYR ASN LYS PHE ILE LYS ASN GLY SEQRES 22 A 353 ARG ALA VAL VAL ILE GLY GLU PHE GLY SER ILE ASP LYS SEQRES 23 A 353 SER ASN LEU SER SER ARG VAL THR HIS ALA GLN TYR TYR SEQRES 24 A 353 ALA GLN GLU ALA THR LYS ARG GLY ILE PRO VAL CYS TRP SEQRES 25 A 353 TRP ASP ASN GLY TYR TYR GLY PRO GLY LYS ASP ASN SER SEQRES 26 A 353 TYR ALA LEU LEU ASN ARG SER SER LEU THR TRP TYR TYR SEQRES 27 A 353 PRO GLU ILE VAL GLN ALA LEU VAL LYS GLY SER GLY TYR SEQRES 28 A 353 THR VAL HET PG4 A 401 31 HET PEG A 402 17 HET PEG A 403 17 HET PEG A 404 17 HET PEG A 405 17 HET PGE A 406 24 HET PGE A 407 24 HET PGE A 408 24 HET PGE A 409 24 HETNAM PG4 TETRAETHYLENE GLYCOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM PGE TRIETHYLENE GLYCOL FORMUL 2 PG4 C8 H18 O5 FORMUL 3 PEG 4(C4 H10 O3) FORMUL 7 PGE 4(C6 H14 O4) FORMUL 11 HOH *446(H2 O) HELIX 1 AA1 THR A 42 ARG A 51 1 10 HELIX 2 AA2 SER A 68 CYS A 75 5 8 HELIX 3 AA3 THR A 82 GLY A 93 1 12 HELIX 4 AA4 ASP A 116 ASP A 132 1 17 HELIX 5 AA5 ASN A 155 PHE A 174 1 20 HELIX 6 AA6 THR A 202 ALA A 222 1 21 HELIX 7 AA7 HIS A 237 CYS A 240 5 4 HELIX 8 AA8 LEU A 242 LEU A 249 1 8 HELIX 9 AA9 ILE A 251 ASP A 255 5 5 HELIX 10 AB1 PRO A 267 VAL A 273 1 7 HELIX 11 AB2 THR A 282 PHE A 300 1 19 HELIX 12 AB3 ILE A 301 GLY A 304 5 4 HELIX 13 AB4 ASN A 319 ARG A 337 1 19 HELIX 14 AB5 TYR A 369 GLY A 381 1 13 SHEET 1 AA1 9 LEU A 52 LEU A 56 0 SHEET 2 AA1 9 THR A 96 ILE A 99 1 O ARG A 98 N LEU A 56 SHEET 3 AA1 9 TYR A 136 ASN A 140 1 O ILE A 138 N ILE A 99 SHEET 4 AA1 9 LEU A 181 GLU A 184 1 O GLU A 184 N ILE A 139 SHEET 5 AA1 9 LEU A 232 PRO A 235 1 O MET A 233 N PHE A 183 SHEET 6 AA1 9 ILE A 258 HIS A 263 1 O ILE A 259 N LEU A 232 SHEET 7 AA1 9 VAL A 307 PHE A 312 1 O VAL A 308 N VAL A 260 SHEET 8 AA1 9 VAL A 341 ASP A 345 1 O TRP A 344 N PHE A 312 SHEET 9 AA1 9 LEU A 52 LEU A 56 1 N GLY A 53 O VAL A 341 SHEET 1 AA2 2 LEU A 360 ASN A 361 0 SHEET 2 AA2 2 THR A 366 TRP A 367 -1 O THR A 366 N ASN A 361 CISPEP 1 ALA A 110 PRO A 111 0 5.11 CISPEP 2 SER A 266 PRO A 267 0 -9.09 CISPEP 3 SER A 266 PRO A 267 0 -9.19 SITE 1 AC1 8 TRP A 76 ASN A 146 THR A 147 VAL A 150 SITE 2 AC1 8 VAL A 192 PEG A 405 HOH A 509 HOH A 753 SITE 1 AC2 6 TYR A 63 ALA A 104 HIS A 143 ASN A 146 SITE 2 AC2 6 HOH A 502 HOH A 576 SITE 1 AC3 4 TYR A 268 ASP A 354 ASN A 355 HOH A 745 SITE 1 AC4 3 SER A 68 TYR A 153 GLN A 156 SITE 1 AC5 6 ASN A 58 TYR A 348 ASN A 355 PG4 A 401 SITE 2 AC5 6 PGE A 407 HOH A 509 SITE 1 AC6 9 TYR A 291 ASP A 294 ALA A 295 TYR A 297 SITE 2 AC6 9 ASN A 298 LYS A 302 HOH A 587 HOH A 726 SITE 3 AC6 9 HOH A 778 SITE 1 AC7 10 TYR A 265 GLU A 311 TRP A 344 ASN A 355 SITE 2 AC7 10 PEG A 405 HOH A 573 HOH A 636 HOH A 666 SITE 3 AC7 10 HOH A 709 HOH A 756 SITE 1 AC8 6 ASN A 361 SER A 364 THR A 366 TRP A 367 SITE 2 AC8 6 HOH A 648 HOH A 912 SITE 1 AC9 6 LYS A 48 THR A 335 LYS A 336 GLY A 338 SITE 2 AC9 6 HOH A 521 HOH A 750 CRYST1 70.850 70.850 57.610 90.00 90.00 120.00 P 31 3 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014114 0.008149 0.000000 0.00000 SCALE2 0.000000 0.016298 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017358 0.00000