HEADER HYDROLASE 16-OCT-18 6MS9 TITLE GDP-BOUND KRAS P34R MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: GTPASE KRAS; COMPND 3 CHAIN: C, B, A; COMPND 4 SYNONYM: K-RAS 2,KI-RAS,C-K-RAS,C-KI-RAS; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KRAS, KRAS2, RASK2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GTPASE KRAS HYDROLYSIS, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR A.K.BERA,K.D.WESTOVER REVDAT 3 11-OCT-23 6MS9 1 REMARK REVDAT 2 26-AUG-20 6MS9 1 TITLE JRNL LINK REVDAT 1 15-APR-20 6MS9 0 JRNL AUTH A.K.BERA,J.LU,C.LU,L.LI,S.GONDI,W.YAN,A.NELSON,G.ZHANG, JRNL AUTH 2 K.D.WESTOVER JRNL TITL GTP HYDROLYSIS IS MODULATED BY ARG34 IN THE JRNL TITL 2 RASOPATHY-ASSOCIATED KRASP34R. JRNL REF BIRTH DEFECTS RES V. 112 708 2020 JRNL REFN ISSN 2472-1727 JRNL PMID 32187889 JRNL DOI 10.1002/BDR2.1647 REMARK 2 REMARK 2 RESOLUTION. 1.49 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14RC3_3199 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.49 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.69 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 3 NUMBER OF REFLECTIONS : 74231 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3785 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.7000 - 4.4600 0.99 2700 162 0.1695 0.2183 REMARK 3 2 4.4600 - 3.5400 1.00 2702 135 0.1427 0.1792 REMARK 3 3 3.5400 - 3.0900 0.99 2690 134 0.1681 0.2225 REMARK 3 4 3.0900 - 2.8100 0.99 2679 128 0.1820 0.1958 REMARK 3 5 2.8100 - 2.6100 1.00 2658 156 0.1909 0.2360 REMARK 3 6 2.6100 - 2.4600 1.00 2653 165 0.1863 0.2222 REMARK 3 7 2.4600 - 2.3300 0.99 2661 148 0.1873 0.2460 REMARK 3 8 2.3300 - 2.2300 0.99 2681 159 0.1995 0.2544 REMARK 3 9 2.2300 - 2.1500 0.99 2633 151 0.1947 0.1937 REMARK 3 10 2.1500 - 2.0700 0.99 2643 142 0.2038 0.2246 REMARK 3 11 2.0700 - 2.0100 1.00 2644 144 0.2123 0.2785 REMARK 3 12 2.0100 - 1.9500 1.00 2711 134 0.2081 0.2386 REMARK 3 13 1.9500 - 1.9000 1.00 2636 154 0.2402 0.2882 REMARK 3 14 1.9000 - 1.8500 1.00 2676 141 0.2265 0.2423 REMARK 3 15 1.8500 - 1.8100 0.98 2598 162 0.2267 0.2280 REMARK 3 16 1.8100 - 1.7700 0.99 2649 150 0.2212 0.2508 REMARK 3 17 1.7700 - 1.7400 0.99 2623 157 0.2137 0.2923 REMARK 3 18 1.7400 - 1.7000 0.99 2684 128 0.2174 0.2539 REMARK 3 19 1.7000 - 1.6700 0.99 2656 133 0.2333 0.2652 REMARK 3 20 1.6700 - 1.6400 0.99 2635 132 0.2332 0.2395 REMARK 3 21 1.6400 - 1.6200 0.99 2685 134 0.2333 0.2803 REMARK 3 22 1.6200 - 1.5900 0.99 2643 119 0.2305 0.2718 REMARK 3 23 1.5900 - 1.5700 1.00 2716 122 0.2425 0.2349 REMARK 3 24 1.5700 - 1.5500 0.98 2570 140 0.2524 0.2759 REMARK 3 25 1.5500 - 1.5300 0.97 2655 135 0.2535 0.2701 REMARK 3 26 1.5300 - 1.5100 0.94 2473 134 0.2660 0.3043 REMARK 3 27 1.5100 - 1.4900 0.56 1492 86 0.2730 0.2829 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.186 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 12.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.04 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 3994 REMARK 3 ANGLE : 0.742 5418 REMARK 3 CHIRALITY : 0.060 617 REMARK 3 PLANARITY : 0.005 730 REMARK 3 DIHEDRAL : 21.941 1575 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 31.2935 3.9570 22.1642 REMARK 3 T TENSOR REMARK 3 T11: 0.1212 T22: 0.0566 REMARK 3 T33: 0.0888 T12: -0.0217 REMARK 3 T13: -0.0155 T23: 0.0381 REMARK 3 L TENSOR REMARK 3 L11: 0.4395 L22: 0.1907 REMARK 3 L33: 0.2806 L12: -0.1092 REMARK 3 L13: -0.1514 L23: 0.1115 REMARK 3 S TENSOR REMARK 3 S11: 0.0169 S12: -0.0425 S13: -0.0321 REMARK 3 S21: 0.0011 S22: -0.0211 S23: -0.0002 REMARK 3 S31: 0.0391 S32: -0.0144 S33: -0.0050 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6MS9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-OCT-18. REMARK 100 THE DEPOSITION ID IS D_1000237500. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-NOV-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 74438 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.490 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 31.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.49 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : 4.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4OBE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.8 M NA/K-PHOSPHATE PH 8.3, PH 8.2, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 33.91050 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.19850 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 33.91050 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 42.19850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH C 446 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 395 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP C 30 REMARK 465 GLU C 31 REMARK 465 TYR C 32 REMARK 465 ASP C 33 REMARK 465 PRO C 34 REMARK 465 THR C 35 REMARK 465 ILE C 36 REMARK 465 THR C 58 REMARK 465 ALA C 59 REMARK 465 GLY C 60 REMARK 465 GLN C 61 REMARK 465 GLU C 62 REMARK 465 GLU C 63 REMARK 465 TYR C 64 REMARK 465 GLU B 31 REMARK 465 TYR B 32 REMARK 465 ASP B 33 REMARK 465 PRO B 34 REMARK 465 THR B 35 REMARK 465 ILE B 36 REMARK 465 GLU B 37 REMARK 465 GLY B 60 REMARK 465 GLN B 61 REMARK 465 GLU B 62 REMARK 465 GLU B 63 REMARK 465 TYR B 64 REMARK 465 SER B 65 REMARK 465 VAL A 29 REMARK 465 ASP A 30 REMARK 465 GLU A 31 REMARK 465 TYR A 32 REMARK 465 ASP A 33 REMARK 465 PRO A 34 REMARK 465 THR A 35 REMARK 465 ILE A 36 REMARK 465 GLU A 37 REMARK 465 LYS A 169 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG C 149 -1.53 78.43 REMARK 500 LYS B 117 32.88 74.75 REMARK 500 LYS A 117 33.67 74.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER C 17 OG REMARK 620 2 GDP C 201 O1B 92.2 REMARK 620 3 HOH C 350 O 111.9 96.8 REMARK 620 4 HOH C 409 O 97.9 169.2 82.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER B 17 OG REMARK 620 2 GDP B 201 O1B 86.5 REMARK 620 3 HOH B 309 O 87.0 78.7 REMARK 620 4 HOH B 330 O 174.0 91.3 87.1 REMARK 620 5 HOH B 358 O 97.0 92.3 169.9 88.6 REMARK 620 6 HOH B 389 O 90.9 167.8 89.3 90.1 99.9 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GDP C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG C 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GDP B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GDP A 201 DBREF 6MS9 C 1 169 UNP P01116 RASK_HUMAN 1 169 DBREF 6MS9 B 1 169 UNP P01116 RASK_HUMAN 1 169 DBREF 6MS9 A 1 169 UNP P01116 RASK_HUMAN 1 169 SEQRES 1 C 169 MET THR GLU TYR LYS LEU VAL VAL VAL GLY ALA GLY GLY SEQRES 2 C 169 VAL GLY LYS SER ALA LEU THR ILE GLN LEU ILE GLN ASN SEQRES 3 C 169 HIS PHE VAL ASP GLU TYR ASP PRO THR ILE GLU ASP SER SEQRES 4 C 169 TYR ARG LYS GLN VAL VAL ILE ASP GLY GLU THR CYS LEU SEQRES 5 C 169 LEU ASP ILE LEU ASP THR ALA GLY GLN GLU GLU TYR SER SEQRES 6 C 169 ALA MET ARG ASP GLN TYR MET ARG THR GLY GLU GLY PHE SEQRES 7 C 169 LEU CYS VAL PHE ALA ILE ASN ASN THR LYS SER PHE GLU SEQRES 8 C 169 ASP ILE HIS HIS TYR ARG GLU GLN ILE LYS ARG VAL LYS SEQRES 9 C 169 ASP SER GLU ASP VAL PRO MET VAL LEU VAL GLY ASN LYS SEQRES 10 C 169 CYS ASP LEU PRO SER ARG THR VAL ASP THR LYS GLN ALA SEQRES 11 C 169 GLN ASP LEU ALA ARG SER TYR GLY ILE PRO PHE ILE GLU SEQRES 12 C 169 THR SER ALA LYS THR ARG GLN GLY VAL ASP ASP ALA PHE SEQRES 13 C 169 TYR THR LEU VAL ARG GLU ILE ARG LYS HIS LYS GLU LYS SEQRES 1 B 169 MET THR GLU TYR LYS LEU VAL VAL VAL GLY ALA GLY GLY SEQRES 2 B 169 VAL GLY LYS SER ALA LEU THR ILE GLN LEU ILE GLN ASN SEQRES 3 B 169 HIS PHE VAL ASP GLU TYR ASP PRO THR ILE GLU ASP SER SEQRES 4 B 169 TYR ARG LYS GLN VAL VAL ILE ASP GLY GLU THR CYS LEU SEQRES 5 B 169 LEU ASP ILE LEU ASP THR ALA GLY GLN GLU GLU TYR SER SEQRES 6 B 169 ALA MET ARG ASP GLN TYR MET ARG THR GLY GLU GLY PHE SEQRES 7 B 169 LEU CYS VAL PHE ALA ILE ASN ASN THR LYS SER PHE GLU SEQRES 8 B 169 ASP ILE HIS HIS TYR ARG GLU GLN ILE LYS ARG VAL LYS SEQRES 9 B 169 ASP SER GLU ASP VAL PRO MET VAL LEU VAL GLY ASN LYS SEQRES 10 B 169 CYS ASP LEU PRO SER ARG THR VAL ASP THR LYS GLN ALA SEQRES 11 B 169 GLN ASP LEU ALA ARG SER TYR GLY ILE PRO PHE ILE GLU SEQRES 12 B 169 THR SER ALA LYS THR ARG GLN GLY VAL ASP ASP ALA PHE SEQRES 13 B 169 TYR THR LEU VAL ARG GLU ILE ARG LYS HIS LYS GLU LYS SEQRES 1 A 169 MET THR GLU TYR LYS LEU VAL VAL VAL GLY ALA GLY GLY SEQRES 2 A 169 VAL GLY LYS SER ALA LEU THR ILE GLN LEU ILE GLN ASN SEQRES 3 A 169 HIS PHE VAL ASP GLU TYR ASP PRO THR ILE GLU ASP SER SEQRES 4 A 169 TYR ARG LYS GLN VAL VAL ILE ASP GLY GLU THR CYS LEU SEQRES 5 A 169 LEU ASP ILE LEU ASP THR ALA GLY GLN GLU GLU TYR SER SEQRES 6 A 169 ALA MET ARG ASP GLN TYR MET ARG THR GLY GLU GLY PHE SEQRES 7 A 169 LEU CYS VAL PHE ALA ILE ASN ASN THR LYS SER PHE GLU SEQRES 8 A 169 ASP ILE HIS HIS TYR ARG GLU GLN ILE LYS ARG VAL LYS SEQRES 9 A 169 ASP SER GLU ASP VAL PRO MET VAL LEU VAL GLY ASN LYS SEQRES 10 A 169 CYS ASP LEU PRO SER ARG THR VAL ASP THR LYS GLN ALA SEQRES 11 A 169 GLN ASP LEU ALA ARG SER TYR GLY ILE PRO PHE ILE GLU SEQRES 12 A 169 THR SER ALA LYS THR ARG GLN GLY VAL ASP ASP ALA PHE SEQRES 13 A 169 TYR THR LEU VAL ARG GLU ILE ARG LYS HIS LYS GLU LYS HET GDP C 201 43 HET MG C 202 1 HET GDP B 201 43 HET MG B 202 1 HET GDP A 201 43 HETNAM GDP GUANOSINE-5'-DIPHOSPHATE HETNAM MG MAGNESIUM ION FORMUL 4 GDP 3(C10 H15 N5 O11 P2) FORMUL 5 MG 2(MG 2+) FORMUL 9 HOH *416(H2 O) HELIX 1 AA1 GLY C 15 ASN C 26 1 12 HELIX 2 AA2 ALA C 66 GLY C 75 1 10 HELIX 3 AA3 ASN C 86 ASP C 92 1 7 HELIX 4 AA4 ASP C 92 ASP C 105 1 14 HELIX 5 AA5 ASP C 126 GLY C 138 1 13 HELIX 6 AA6 GLY C 151 LYS C 169 1 19 HELIX 7 AA7 GLY B 15 ASN B 26 1 12 HELIX 8 AA8 MET B 67 GLY B 75 1 9 HELIX 9 AA9 ASN B 86 ASP B 92 1 7 HELIX 10 AB1 ASP B 92 ASP B 105 1 14 HELIX 11 AB2 ASP B 126 GLY B 138 1 13 HELIX 12 AB3 GLY B 151 LYS B 169 1 19 HELIX 13 AB4 GLY A 15 ASN A 26 1 12 HELIX 14 AB5 THR A 58 GLU A 63 5 6 HELIX 15 AB6 TYR A 64 THR A 74 1 11 HELIX 16 AB7 ASN A 86 ASP A 92 1 7 HELIX 17 AB8 ASP A 92 ASP A 105 1 14 HELIX 18 AB9 ASP A 126 GLY A 138 1 13 HELIX 19 AC1 GLY A 151 LYS A 167 1 17 SHEET 1 AA1 6 SER C 39 ILE C 46 0 SHEET 2 AA1 6 GLU C 49 LEU C 56 -1 O LEU C 53 N LYS C 42 SHEET 3 AA1 6 THR C 2 VAL C 9 1 N LEU C 6 O ASP C 54 SHEET 4 AA1 6 GLY C 77 ALA C 83 1 O VAL C 81 N VAL C 9 SHEET 5 AA1 6 MET C 111 ASN C 116 1 O ASN C 116 N PHE C 82 SHEET 6 AA1 6 PHE C 141 GLU C 143 1 O ILE C 142 N LEU C 113 SHEET 1 AA2 6 SER B 39 ILE B 46 0 SHEET 2 AA2 6 GLU B 49 ASP B 57 -1 O LEU B 53 N LYS B 42 SHEET 3 AA2 6 THR B 2 GLY B 10 1 N LEU B 6 O ASP B 54 SHEET 4 AA2 6 GLY B 77 ALA B 83 1 O VAL B 81 N VAL B 9 SHEET 5 AA2 6 MET B 111 ASN B 116 1 O ASN B 116 N PHE B 82 SHEET 6 AA2 6 PHE B 141 GLU B 143 1 O ILE B 142 N LEU B 113 SHEET 1 AA3 6 SER A 39 ILE A 46 0 SHEET 2 AA3 6 GLU A 49 LEU A 56 -1 O LEU A 53 N LYS A 42 SHEET 3 AA3 6 THR A 2 GLY A 10 1 N TYR A 4 O ASP A 54 SHEET 4 AA3 6 GLY A 77 ALA A 83 1 O VAL A 81 N VAL A 9 SHEET 5 AA3 6 MET A 111 ASN A 116 1 O ASN A 116 N PHE A 82 SHEET 6 AA3 6 PHE A 141 GLU A 143 1 O ILE A 142 N LEU A 113 LINK OG SER C 17 MG MG C 202 1555 1555 2.13 LINK O1B GDP C 201 MG MG C 202 1555 1555 2.17 LINK MG MG C 202 O HOH C 350 1555 1555 1.87 LINK MG MG C 202 O HOH C 409 1555 1555 1.95 LINK OG ASER B 17 MG MG B 202 1555 1555 2.23 LINK O1B GDP B 201 MG MG B 202 1555 1555 2.26 LINK MG MG B 202 O HOH B 309 1555 1555 2.16 LINK MG MG B 202 O HOH B 330 1555 1555 2.28 LINK MG MG B 202 O HOH B 358 1555 1555 1.87 LINK MG MG B 202 O HOH B 389 1555 1555 2.02 SITE 1 AC1 21 GLY C 13 VAL C 14 GLY C 15 LYS C 16 SITE 2 AC1 21 SER C 17 ALA C 18 PHE C 28 VAL C 29 SITE 3 AC1 21 ASN C 116 LYS C 117 ASP C 119 LEU C 120 SITE 4 AC1 21 SER C 145 ALA C 146 LYS C 147 MG C 202 SITE 5 AC1 21 HOH C 317 HOH C 323 HOH C 350 HOH C 366 SITE 6 AC1 21 HOH C 384 SITE 1 AC2 5 SER C 17 ASP C 57 GDP C 201 HOH C 350 SITE 2 AC2 5 HOH C 409 SITE 1 AC3 25 GLY B 13 VAL B 14 GLY B 15 LYS B 16 SITE 2 AC3 25 SER B 17 ALA B 18 PHE B 28 VAL B 29 SITE 3 AC3 25 ASP B 30 ASN B 116 LYS B 117 ASP B 119 SITE 4 AC3 25 LEU B 120 SER B 145 ALA B 146 LYS B 147 SITE 5 AC3 25 MG B 202 HOH B 309 HOH B 321 HOH B 330 SITE 6 AC3 25 HOH B 358 HOH B 360 HOH B 365 HOH B 379 SITE 7 AC3 25 HOH B 391 SITE 1 AC4 6 SER B 17 GDP B 201 HOH B 309 HOH B 330 SITE 2 AC4 6 HOH B 358 HOH B 389 SITE 1 AC5 21 GLY A 13 VAL A 14 GLY A 15 LYS A 16 SITE 2 AC5 21 SER A 17 ALA A 18 PHE A 28 ASN A 116 SITE 3 AC5 21 LYS A 117 ASP A 119 LEU A 120 SER A 145 SITE 4 AC5 21 ALA A 146 LYS A 147 HOH A 308 HOH A 310 SITE 5 AC5 21 HOH A 320 HOH A 328 HOH A 392 HOH A 393 SITE 6 AC5 21 HOH A 397 CRYST1 67.821 84.397 88.167 90.00 110.48 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014745 0.000000 0.005507 0.00000 SCALE2 0.000000 0.011849 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012107 0.00000