HEADER HYDROLASE 23-OCT-18 6MUQ TITLE 1.67 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF MUREIN-DD-ENDOPEPTIDASE TITLE 2 FROM YERSINIA ENTEROCOLITICA. COMPND MOL_ID: 1; COMPND 2 MOLECULE: MUREIN-DD-ENDOPEPTIDASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: YERSINIA ENTEROCOLITICA SUBSP. PALEARCTICA SOURCE 3 SEROTYPE O:3 (STRAIN DSM 13030 / CIP 106945 / Y11); SOURCE 4 ORGANISM_TAXID: 930944; SOURCE 5 STRAIN: DSM 13030 / CIP 106945 / Y11; SOURCE 6 GENE: Y11_17941; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) MAGIC; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PMCSG53 KEYWDS STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS KEYWDS 2 DISEASES, CSGID, HYDROLASE, D-ALANYL-D-ALANINE ENDOPEPTIDASE. EXPDTA X-RAY DIFFRACTION AUTHOR G.MINASOV,L.SHUVALOVA,O.KIRYUKHINA,W.F.ANDERSON,K.J.F.SATCHELL, AUTHOR 2 A.JOACHIMIAK,CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES AUTHOR 3 (CSGID) REVDAT 3 15-NOV-23 6MUQ 1 REMARK REVDAT 2 11-OCT-23 6MUQ 1 REMARK REVDAT 1 31-OCT-18 6MUQ 0 JRNL AUTH G.MINASOV,L.SHUVALOVA,O.KIRYUKHINA,W.F.ANDERSON, JRNL AUTH 2 K.J.F.SATCHELL,A.JOACHIMIAK, JRNL AUTH 3 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES JRNL AUTH 4 (CSGID) JRNL TITL 1.67 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF JRNL TITL 2 MUREIN-DD-ENDOPEPTIDASE FROM YERSINIA ENTEROCOLITICA. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.67 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.67 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.83 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 24714 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.171 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1283 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.67 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.71 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1805 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.68 REMARK 3 BIN R VALUE (WORKING SET) : 0.3290 REMARK 3 BIN FREE R VALUE SET COUNT : 91 REMARK 3 BIN FREE R VALUE : 0.3240 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2062 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 9 REMARK 3 SOLVENT ATOMS : 178 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.82 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.86000 REMARK 3 B22 (A**2) : 0.06000 REMARK 3 B33 (A**2) : 0.89000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -2.31000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.113 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.107 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.105 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.919 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.976 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.958 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2209 ; 0.006 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 2114 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3003 ; 1.445 ; 1.657 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4908 ; 0.409 ; 1.571 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 288 ; 3.001 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 101 ;23.024 ;22.079 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 354 ; 9.521 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;13.583 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 302 ; 0.062 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2488 ; 0.051 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 442 ; 0.047 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1126 ; 1.271 ; 2.044 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1124 ; 1.265 ; 2.040 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1422 ; 1.940 ; 3.051 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1423 ; 1.940 ; 3.054 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1083 ; 1.719 ; 2.331 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1080 ; 1.717 ; 2.321 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1576 ; 2.727 ; 3.386 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2443 ; 5.536 ;25.602 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2407 ; 5.471 ;25.138 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 44 A 70 REMARK 3 ORIGIN FOR THE GROUP (A): 15.9569 26.0769 21.3286 REMARK 3 T TENSOR REMARK 3 T11: 0.3351 T22: 0.5360 REMARK 3 T33: 0.3681 T12: 0.1946 REMARK 3 T13: 0.1100 T23: -0.1163 REMARK 3 L TENSOR REMARK 3 L11: 3.7202 L22: 3.2259 REMARK 3 L33: 1.9081 L12: -0.6691 REMARK 3 L13: -2.1998 L23: -0.9259 REMARK 3 S TENSOR REMARK 3 S11: 0.1219 S12: 0.1087 S13: -0.0018 REMARK 3 S21: 0.6540 S22: 0.1533 S23: 0.6544 REMARK 3 S31: -0.4316 S32: -0.2806 S33: -0.2752 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 71 A 219 REMARK 3 ORIGIN FOR THE GROUP (A): 40.4451 13.7045 13.4923 REMARK 3 T TENSOR REMARK 3 T11: 0.0492 T22: 0.0874 REMARK 3 T33: 0.0213 T12: -0.0181 REMARK 3 T13: -0.0020 T23: 0.0061 REMARK 3 L TENSOR REMARK 3 L11: 1.3467 L22: 2.2053 REMARK 3 L33: 2.2223 L12: -0.3516 REMARK 3 L13: 0.1960 L23: 0.8329 REMARK 3 S TENSOR REMARK 3 S11: -0.0676 S12: -0.0339 S13: -0.0891 REMARK 3 S21: -0.2243 S22: -0.0109 S23: 0.1506 REMARK 3 S31: -0.0741 S32: 0.1132 S33: 0.0785 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 220 A 256 REMARK 3 ORIGIN FOR THE GROUP (A): 34.1182 21.0744 3.9908 REMARK 3 T TENSOR REMARK 3 T11: 0.2165 T22: 0.1107 REMARK 3 T33: 0.0622 T12: -0.0086 REMARK 3 T13: -0.1068 T23: 0.0293 REMARK 3 L TENSOR REMARK 3 L11: 1.5670 L22: 2.1517 REMARK 3 L33: 1.2888 L12: -0.5567 REMARK 3 L13: -0.6256 L23: 0.7689 REMARK 3 S TENSOR REMARK 3 S11: -0.0182 S12: 0.3063 S13: 0.1261 REMARK 3 S21: -0.5800 S22: -0.0942 S23: 0.2428 REMARK 3 S31: -0.3086 S32: 0.0025 S33: 0.1124 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 257 A 288 REMARK 3 ORIGIN FOR THE GROUP (A): 22.1699 22.6754 12.2979 REMARK 3 T TENSOR REMARK 3 T11: 0.1462 T22: 0.1556 REMARK 3 T33: 0.2394 T12: 0.1154 REMARK 3 T13: -0.1534 T23: -0.1553 REMARK 3 L TENSOR REMARK 3 L11: 1.6927 L22: 4.6974 REMARK 3 L33: 0.4756 L12: 1.9739 REMARK 3 L13: -0.0823 L23: -0.1963 REMARK 3 S TENSOR REMARK 3 S11: -0.0878 S12: 0.0990 S13: 0.2219 REMARK 3 S21: -0.1925 S22: -0.1290 S23: 0.7004 REMARK 3 S31: -0.2353 S32: -0.2271 S33: 0.2169 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 289 A 310 REMARK 3 ORIGIN FOR THE GROUP (A): 10.9348 21.3027 11.2560 REMARK 3 T TENSOR REMARK 3 T11: 0.1479 T22: 0.1552 REMARK 3 T33: 0.1940 T12: 0.0914 REMARK 3 T13: -0.1609 T23: -0.1398 REMARK 3 L TENSOR REMARK 3 L11: 2.9509 L22: 7.3298 REMARK 3 L33: 5.2911 L12: -1.2432 REMARK 3 L13: -3.2405 L23: -1.9960 REMARK 3 S TENSOR REMARK 3 S11: -0.0568 S12: 0.2229 S13: -0.1186 REMARK 3 S21: -0.5925 S22: 0.0704 S23: 0.5507 REMARK 3 S31: 0.2833 S32: -0.4255 S33: -0.0136 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6MUQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-OCT-18. REMARK 100 THE DEPOSITION ID IS D_1000237620. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-OCT-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97856 REMARK 200 MONOCHROMATOR : BE REMARK 200 OPTICS : C(111) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26136 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.670 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : 0.07200 REMARK 200 R SYM (I) : 0.07200 REMARK 200 FOR THE DATA SET : 22.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.67 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.70 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.10 REMARK 200 R MERGE FOR SHELL (I) : 0.70900 REMARK 200 R SYM FOR SHELL (I) : 0.70900 REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MORDA REMARK 200 STARTING MODEL: 6AZI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 29.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN: 7.5 MG/ML, 0.01M TRIS HCL (PH REMARK 280 8.3); SCREEN: PEG'S II (D1), 0.1M SODIUM ACETATE, 0.1M HEPES (PH REMARK 280 7.5), 22% (W/V) PEG 4000., VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 18.92900 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 40 REMARK 465 ASN A 41 REMARK 465 ALA A 42 REMARK 465 SER A 43 REMARK 465 LYS A 311 REMARK 465 ASP A 312 REMARK 465 ALA A 313 REMARK 465 GLN A 314 REMARK 465 GLY A 315 REMARK 465 ARG A 316 REMARK 465 LEU A 317 REMARK 465 ALA A 318 REMARK 465 GLN A 319 REMARK 465 VAL A 320 REMARK 465 SER A 321 REMARK 465 GLU A 322 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 65 -12.65 -143.67 REMARK 500 THR A 65 -12.65 -141.82 REMARK 500 ALA A 81 -131.71 46.68 REMARK 500 ASN A 123 -10.96 79.12 REMARK 500 GLU A 221 61.18 61.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: CSGID-IDP07205 RELATED DB: TARGETTRACK DBREF1 6MUQ A 42 322 UNP A0A0H3NPR7_YERE1 DBREF2 6MUQ A A0A0H3NPR7 42 322 SEQADV 6MUQ SER A 40 UNP A0A0H3NPR EXPRESSION TAG SEQADV 6MUQ ASN A 41 UNP A0A0H3NPR EXPRESSION TAG SEQRES 1 A 283 SER ASN ALA SER GLU VAL LYS GLY LYS ALA PRO LEU GLU SEQRES 2 A 283 LEU ALA SER GLY SER ALA MSE VAL VAL ASP LEU GLN THR SEQRES 3 A 283 ASN LYS VAL ILE TYR ALA ASN ASN ALA ASP GLU VAL VAL SEQRES 4 A 283 PRO ILE ALA SER ILE THR LYS LEU MSE THR ALA MSE VAL SEQRES 5 A 283 VAL LEU ASP ALA LYS LEU PRO LEU ASP GLU ILE ILE SER SEQRES 6 A 283 VAL ASP ILE HIS GLN THR LYS GLU MSE LYS GLY VAL PHE SEQRES 7 A 283 SER ARG VAL ARG VAL ASN SER GLU ILE SER ARG LYS ASP SEQRES 8 A 283 MSE LEU LEU LEU ALA LEU MSE SER SER GLU ASN ARG ALA SEQRES 9 A 283 ALA ALA SER LEU ALA HIS HIS TYR PRO GLY GLY TYR ASN SEQRES 10 A 283 ALA PHE ILE ASN ALA MSE ASN ALA LYS ALA LYS SER LEU SEQRES 11 A 283 GLY MSE THR LYS THR ARG TYR VAL GLU PRO THR GLY LEU SEQRES 12 A 283 SER ILE ASN ASN VAL SER THR ALA ARG ASP LEU THR LYS SEQRES 13 A 283 LEU LEU ILE ALA THR LYS GLN TYR PRO LEU ILE GLY GLN SEQRES 14 A 283 LEU SER THR THR THR GLU LYS MSE ALA THR PHE ARG GLU SEQRES 15 A 283 PRO ASN TYR THR LEU PRO PHE ARG ASN THR ASN HIS LEU SEQRES 16 A 283 VAL TYR ASN ASP LYS TRP ASN ILE GLN LEU THR LYS THR SEQRES 17 A 283 GLY PHE THR ASN GLN ALA GLY HIS CYS LEU ALA MSE ARG SEQRES 18 A 283 THR VAL ILE GLY ASN ARG PRO VAL ALA LEU VAL VAL LEU SEQRES 19 A 283 ASP ALA PHE GLY LYS TYR THR HIS PHE ALA ASP ALA ASN SEQRES 20 A 283 ARG LEU ARG SER TRP MSE GLU THR GLY LYS ALA ALA PRO SEQRES 21 A 283 ILE PRO GLY ALA ALA LYS SER TYR ARG GLN GLN LYS ASP SEQRES 22 A 283 ALA GLN GLY ARG LEU ALA GLN VAL SER GLU MODRES 6MUQ MSE A 59 MET MODIFIED RESIDUE MODRES 6MUQ MSE A 87 MET MODIFIED RESIDUE MODRES 6MUQ MSE A 90 MET MODIFIED RESIDUE MODRES 6MUQ MSE A 113 MET MODIFIED RESIDUE MODRES 6MUQ MSE A 131 MET MODIFIED RESIDUE MODRES 6MUQ MSE A 137 MET MODIFIED RESIDUE MODRES 6MUQ MSE A 162 MET MODIFIED RESIDUE MODRES 6MUQ MSE A 171 MET MODIFIED RESIDUE MODRES 6MUQ MSE A 216 MET MODIFIED RESIDUE MODRES 6MUQ MSE A 259 MET MODIFIED RESIDUE MODRES 6MUQ MSE A 292 MET MODIFIED RESIDUE HET MSE A 59 8 HET MSE A 87 8 HET MSE A 90 16 HET MSE A 113 8 HET MSE A 131 16 HET MSE A 137 16 HET MSE A 162 8 HET MSE A 171 8 HET MSE A 216 8 HET MSE A 259 16 HET MSE A 292 16 HET ACT A 401 4 HET SO4 A 402 5 HETNAM MSE SELENOMETHIONINE HETNAM ACT ACETATE ION HETNAM SO4 SULFATE ION FORMUL 1 MSE 11(C5 H11 N O2 SE) FORMUL 2 ACT C2 H3 O2 1- FORMUL 3 SO4 O4 S 2- FORMUL 4 HOH *178(H2 O) HELIX 1 AA1 ILE A 83 ALA A 95 1 13 HELIX 2 AA2 THR A 110 LYS A 114 5 5 HELIX 3 AA3 ARG A 128 SER A 139 1 12 HELIX 4 AA4 GLU A 140 HIS A 149 1 10 HELIX 5 AA5 GLY A 154 LEU A 169 1 16 HELIX 6 AA6 THR A 189 LYS A 201 1 13 HELIX 7 AA7 TYR A 203 THR A 211 1 9 HELIX 8 AA8 ASN A 232 ASN A 237 5 6 HELIX 9 AA9 TYR A 279 GLY A 295 1 17 HELIX 10 AB1 PRO A 301 GLN A 310 1 10 SHEET 1 AA1 5 VAL A 68 ASN A 72 0 SHEET 2 AA1 5 SER A 57 ASP A 62 -1 N VAL A 60 O ILE A 69 SHEET 3 AA1 5 ARG A 266 ALA A 275 -1 O LEU A 273 N SER A 57 SHEET 4 AA1 5 GLY A 254 ILE A 263 -1 N THR A 261 O VAL A 268 SHEET 5 AA1 5 ILE A 242 THR A 250 -1 N GLN A 243 O ARG A 260 SHEET 1 AA2 2 VAL A 78 PRO A 79 0 SHEET 2 AA2 2 VAL A 187 SER A 188 -1 O SER A 188 N VAL A 78 SHEET 1 AA3 2 ILE A 102 SER A 104 0 SHEET 2 AA3 2 GLU A 125 SER A 127 -1 O ILE A 126 N ILE A 103 SHEET 1 AA4 2 GLU A 214 PHE A 219 0 SHEET 2 AA4 2 TYR A 224 ARG A 229 -1 O TYR A 224 N PHE A 219 LINK C ALA A 58 N MSE A 59 1555 1555 1.34 LINK C MSE A 59 N VAL A 60 1555 1555 1.33 LINK C LEU A 86 N MSE A 87 1555 1555 1.34 LINK C MSE A 87 N THR A 88 1555 1555 1.33 LINK C ALA A 89 N AMSE A 90 1555 1555 1.34 LINK C ALA A 89 N BMSE A 90 1555 1555 1.34 LINK C AMSE A 90 N VAL A 91 1555 1555 1.34 LINK C BMSE A 90 N VAL A 91 1555 1555 1.34 LINK C GLU A 112 N MSE A 113 1555 1555 1.34 LINK C MSE A 113 N LYS A 114 1555 1555 1.34 LINK C ASP A 130 N AMSE A 131 1555 1555 1.34 LINK C ASP A 130 N BMSE A 131 1555 1555 1.34 LINK C AMSE A 131 N LEU A 132 1555 1555 1.34 LINK C BMSE A 131 N LEU A 132 1555 1555 1.34 LINK C LEU A 136 N AMSE A 137 1555 1555 1.33 LINK C LEU A 136 N BMSE A 137 1555 1555 1.34 LINK C AMSE A 137 N SER A 138 1555 1555 1.34 LINK C BMSE A 137 N SER A 138 1555 1555 1.34 LINK C ALA A 161 N MSE A 162 1555 1555 1.34 LINK C MSE A 162 N ASN A 163 1555 1555 1.33 LINK C GLY A 170 N MSE A 171 1555 1555 1.35 LINK C MSE A 171 N THR A 172 1555 1555 1.34 LINK C LYS A 215 N MSE A 216 1555 1555 1.34 LINK C MSE A 216 N ALA A 217 1555 1555 1.34 LINK C ALA A 258 N AMSE A 259 1555 1555 1.34 LINK C ALA A 258 N BMSE A 259 1555 1555 1.34 LINK C AMSE A 259 N ARG A 260 1555 1555 1.33 LINK C BMSE A 259 N ARG A 260 1555 1555 1.34 LINK C TRP A 291 N AMSE A 292 1555 1555 1.34 LINK C TRP A 291 N BMSE A 292 1555 1555 1.34 LINK C AMSE A 292 N GLU A 293 1555 1555 1.34 LINK C BMSE A 292 N GLU A 293 1555 1555 1.34 CISPEP 1 GLU A 221 PRO A 222 0 -1.46 SITE 1 AC1 5 LEU A 93 TYR A 203 PRO A 204 LEU A 205 SITE 2 AC1 5 HOH A 546 SITE 1 AC2 3 VAL A 116 PHE A 117 HOH A 540 CRYST1 55.201 37.858 59.577 90.00 115.75 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018116 0.000000 0.008738 0.00000 SCALE2 0.000000 0.026414 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018636 0.00000