HEADER MEMBRANE PROTEIN 28-OCT-18 6MVY TITLE NAVAB VOLTAGE-GATED SODIUM CHANNEL, RESIDUES 1-226, CRYSTALLIZED IN TITLE 2 THE PRESENCE OF CLASS 1B ANTI-ARRHYTHMIC DRUG LIDOCAINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ION TRANSPORT PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARCOBACTER BUTZLERI (STRAIN RM4018); SOURCE 3 ORGANISM_TAXID: 367737; SOURCE 4 STRAIN: RM4018; SOURCE 5 GENE: ABU_1752; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7111 KEYWDS ION CHANNEL VOLTAGE-GATED SODIUM CHANNEL, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.J.LENAEUS,W.A.CATTERALL REVDAT 4 11-OCT-23 6MVY 1 REMARK REVDAT 3 02-JAN-19 6MVY 1 JRNL REVDAT 2 19-DEC-18 6MVY 1 JRNL REVDAT 1 05-DEC-18 6MVY 0 JRNL AUTH T.M.GAMAL EL-DIN,M.J.LENAEUS,N.ZHENG,W.A.CATTERALL JRNL TITL FENESTRATIONS CONTROL RESTING-STATE BLOCK OF A VOLTAGE-GATED JRNL TITL 2 SODIUM CHANNEL. JRNL REF PROC. NATL. ACAD. SCI. V. 115 13111 2018 JRNL REF 2 U.S.A. JRNL REFN ESSN 1091-6490 JRNL PMID 30518562 JRNL DOI 10.1073/PNAS.1814928115 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.03 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 29995 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1504 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.0367 - 6.6664 0.99 2619 145 0.2201 0.2457 REMARK 3 2 6.6664 - 5.2952 1.00 2610 132 0.2818 0.2937 REMARK 3 3 5.2952 - 4.6270 1.00 2609 136 0.1731 0.2036 REMARK 3 4 4.6270 - 4.2045 1.00 2616 141 0.1672 0.2006 REMARK 3 5 4.2045 - 3.9034 1.00 2597 136 0.1593 0.1986 REMARK 3 6 3.9034 - 3.6734 1.00 2603 134 0.1703 0.2400 REMARK 3 7 3.6734 - 3.4895 1.00 2593 134 0.1665 0.2118 REMARK 3 8 3.4895 - 3.3377 1.00 2595 137 0.1845 0.2125 REMARK 3 9 3.3377 - 3.2093 1.00 2567 137 0.2330 0.2511 REMARK 3 10 3.2093 - 3.0986 1.00 2606 146 0.2709 0.3168 REMARK 3 11 3.0986 - 3.0017 0.96 2476 126 0.2981 0.3424 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.390 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.120 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3853 REMARK 3 ANGLE : 0.880 5229 REMARK 3 CHIRALITY : 0.055 620 REMARK 3 PLANARITY : 0.005 598 REMARK 3 DIHEDRAL : 8.372 2193 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 999 THROUGH 1034 ) REMARK 3 ORIGIN FOR THE GROUP (A): -33.6596 35.2370 -32.5107 REMARK 3 T TENSOR REMARK 3 T11: 1.2719 T22: 1.2873 REMARK 3 T33: 1.3560 T12: 0.2572 REMARK 3 T13: 0.1344 T23: -0.3831 REMARK 3 L TENSOR REMARK 3 L11: 6.8767 L22: 2.8250 REMARK 3 L33: 8.7060 L12: 0.1044 REMARK 3 L13: -3.3699 L23: 1.8426 REMARK 3 S TENSOR REMARK 3 S11: -0.6378 S12: 0.8860 S13: -0.7891 REMARK 3 S21: -0.2367 S22: 0.6772 S23: -0.5573 REMARK 3 S31: 0.4572 S32: 2.1688 S33: 0.8178 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1035 THROUGH 1113 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.2996 42.7317 -25.3202 REMARK 3 T TENSOR REMARK 3 T11: 0.9862 T22: 0.9462 REMARK 3 T33: 1.2315 T12: 0.1107 REMARK 3 T13: 0.2327 T23: -0.3673 REMARK 3 L TENSOR REMARK 3 L11: 4.4231 L22: 2.5121 REMARK 3 L33: 3.0378 L12: -0.5743 REMARK 3 L13: -0.7917 L23: 1.2312 REMARK 3 S TENSOR REMARK 3 S11: 0.0536 S12: -0.3225 S13: -0.1934 REMARK 3 S21: -0.2404 S22: 0.3489 S23: -0.2387 REMARK 3 S31: 0.3682 S32: 0.8734 S33: -0.3056 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1114 THROUGH 1193 ) REMARK 3 ORIGIN FOR THE GROUP (A): -51.1179 72.0160 -19.2542 REMARK 3 T TENSOR REMARK 3 T11: 0.5745 T22: 0.6414 REMARK 3 T33: 0.5792 T12: -0.0005 REMARK 3 T13: 0.0595 T23: 0.0624 REMARK 3 L TENSOR REMARK 3 L11: 3.3820 L22: 4.3808 REMARK 3 L33: 3.4151 L12: -0.8740 REMARK 3 L13: -0.4546 L23: 0.7568 REMARK 3 S TENSOR REMARK 3 S11: 0.3565 S12: 0.4482 S13: 0.0193 REMARK 3 S21: -0.4371 S22: -0.0372 S23: -0.4749 REMARK 3 S31: -0.1538 S32: 0.2381 S33: -0.4707 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1194 THROUGH 1224 ) REMARK 3 ORIGIN FOR THE GROUP (A): -57.0664 71.9140 -28.9984 REMARK 3 T TENSOR REMARK 3 T11: 1.0120 T22: 0.5730 REMARK 3 T33: 0.6500 T12: 0.0750 REMARK 3 T13: 0.1892 T23: 0.1425 REMARK 3 L TENSOR REMARK 3 L11: 1.9795 L22: 4.7549 REMARK 3 L33: 8.1769 L12: -2.1752 REMARK 3 L13: -1.3452 L23: 5.0303 REMARK 3 S TENSOR REMARK 3 S11: -0.3057 S12: 0.7948 S13: -0.2356 REMARK 3 S21: -0.6034 S22: 0.0991 S23: 0.5324 REMARK 3 S31: 0.4393 S32: 0.7639 S33: -0.0241 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 999 THROUGH 1088 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.0166 87.6830 27.9976 REMARK 3 T TENSOR REMARK 3 T11: 1.1973 T22: 1.1382 REMARK 3 T33: 1.2273 T12: -0.2119 REMARK 3 T13: -0.1531 T23: -0.3380 REMARK 3 L TENSOR REMARK 3 L11: 5.7773 L22: 0.9284 REMARK 3 L33: 3.8778 L12: 0.7907 REMARK 3 L13: 2.7331 L23: 1.6814 REMARK 3 S TENSOR REMARK 3 S11: 0.0803 S12: 0.2968 S13: -0.0155 REMARK 3 S21: 0.1464 S22: 0.4357 S23: -0.2522 REMARK 3 S31: -0.5593 S32: 1.6059 S33: 0.0584 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1089 THROUGH 1193 ) REMARK 3 ORIGIN FOR THE GROUP (A): -47.9897 59.8403 19.1820 REMARK 3 T TENSOR REMARK 3 T11: 0.7194 T22: 0.7501 REMARK 3 T33: 0.6477 T12: 0.0077 REMARK 3 T13: -0.0778 T23: 0.0107 REMARK 3 L TENSOR REMARK 3 L11: 3.9707 L22: 2.6747 REMARK 3 L33: 1.5789 L12: 1.6390 REMARK 3 L13: 0.8499 L23: -0.3085 REMARK 3 S TENSOR REMARK 3 S11: 0.3001 S12: -0.5626 S13: 0.0936 REMARK 3 S21: 0.6619 S22: -0.2847 S23: -0.1389 REMARK 3 S31: 0.1523 S32: 0.0296 S33: -0.2423 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1194 THROUGH 1224 ) REMARK 3 ORIGIN FOR THE GROUP (A): -57.0599 54.6772 28.2537 REMARK 3 T TENSOR REMARK 3 T11: 0.9398 T22: 0.6511 REMARK 3 T33: 0.5837 T12: -0.0892 REMARK 3 T13: -0.1369 T23: 0.1890 REMARK 3 L TENSOR REMARK 3 L11: 1.7572 L22: 4.6424 REMARK 3 L33: 8.3991 L12: 2.1712 REMARK 3 L13: 1.1821 L23: 5.3367 REMARK 3 S TENSOR REMARK 3 S11: -0.1325 S12: -0.8619 S13: -0.0665 REMARK 3 S21: 0.5737 S22: 0.0919 S23: 0.5545 REMARK 3 S31: -0.0665 S32: 0.7624 S33: -0.0072 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6MVY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-OCT-18. REMARK 100 THE DEPOSITION ID IS D_1000237715. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-MAY-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30052 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 16.00 REMARK 200 R MERGE (I) : 0.12000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.11 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 3RVY REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 81.98 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 6.83 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.8 M AMMONIUM SULFATE 100 MM SODIUM REMARK 280 ACETATE, PH 5.0 10 MM LIDOCAINE, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 8555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 63.29800 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 63.29800 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 96.10950 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 63.29800 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 63.29800 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 96.10950 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 63.29800 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 63.29800 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 96.10950 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 63.29800 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 63.29800 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 96.10950 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 26890 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 41160 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -238.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -126.59600 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 126.59600 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 126.59600 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 -126.59600 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 26870 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 41210 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -239.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -126.59600 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 126.59600 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 126.59600 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 -126.59600 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 983 REMARK 465 ASP A 984 REMARK 465 TYR A 985 REMARK 465 LYS A 986 REMARK 465 ASP A 987 REMARK 465 ASP A 988 REMARK 465 ASP A 989 REMARK 465 ASP A 990 REMARK 465 LYS A 991 REMARK 465 GLY A 992 REMARK 465 SER A 993 REMARK 465 LEU A 994 REMARK 465 VAL A 995 REMARK 465 PRO A 996 REMARK 465 ARG A 997 REMARK 465 GLY A 998 REMARK 465 SER A 1093 REMARK 465 GLY A 1094 REMARK 465 PHE A 1095 REMARK 465 ASN A 1225 REMARK 465 GLN A 1226 REMARK 465 MET B 983 REMARK 465 ASP B 984 REMARK 465 TYR B 985 REMARK 465 LYS B 986 REMARK 465 ASP B 987 REMARK 465 ASP B 988 REMARK 465 ASP B 989 REMARK 465 ASP B 990 REMARK 465 LYS B 991 REMARK 465 GLY B 992 REMARK 465 SER B 993 REMARK 465 LEU B 994 REMARK 465 VAL B 995 REMARK 465 PRO B 996 REMARK 465 ARG B 997 REMARK 465 GLY B 998 REMARK 465 SER B 1093 REMARK 465 GLY B 1094 REMARK 465 PHE B 1095 REMARK 465 ASN B 1225 REMARK 465 GLN B 1226 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A1000 CG ND1 CD2 CE1 NE2 REMARK 470 ARG A1004 CG CD NE CZ NH1 NH2 REMARK 470 ASN A1007 CG OD1 ND2 REMARK 470 LYS A1016 CG CD CE NZ REMARK 470 LYS A1035 CG CD CE NZ REMARK 470 TYR A1065 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ARG A1068 CG CD NE CZ NH1 NH2 REMARK 470 LYS A1073 CG CD CE NZ REMARK 470 THR A1091 OG1 CG2 REMARK 470 SER A1092 OG REMARK 470 GLU A1096 CG CD OE1 OE2 REMARK 470 ARG A1099 CG CD NE CZ NH1 NH2 REMARK 470 LYS A1118 CG CD CE NZ REMARK 470 ARG A1155 CG CD NE CZ NH1 NH2 REMARK 470 ASP A1219 CG OD1 OD2 REMARK 470 MET A1221 CG SD CE REMARK 470 ILE A1223 CG1 CG2 CD1 REMARK 470 LEU A1224 CG CD1 CD2 REMARK 470 HIS B1000 CG ND1 CD2 CE1 NE2 REMARK 470 ARG B1004 CG CD NE CZ NH1 NH2 REMARK 470 LYS B1016 CG CD CE NZ REMARK 470 LYS B1035 CG CD CE NZ REMARK 470 TYR B1065 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ARG B1068 CG CD NE CZ NH1 NH2 REMARK 470 ILE B1069 CG1 CG2 CD1 REMARK 470 LYS B1073 CG CD CE NZ REMARK 470 SER B1092 OG REMARK 470 GLU B1096 CG CD OE1 OE2 REMARK 470 ARG B1099 CG CD NE CZ NH1 NH2 REMARK 470 LYS B1118 CG CD CE NZ REMARK 470 ARG B1155 CG CD NE CZ NH1 NH2 REMARK 470 ASP B1219 CG OD1 OD2 REMARK 470 MET B1221 CG SD CE REMARK 470 ILE B1223 CG1 CG2 CD1 REMARK 470 LEU B1224 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A1068 -128.98 57.41 REMARK 500 PHE A1160 13.50 -146.72 REMARK 500 SER A1180 -63.13 -90.11 REMARK 500 ILE A1183 -56.14 -127.69 REMARK 500 CYS A1217 38.20 -94.47 REMARK 500 VAL A1218 -46.68 -133.32 REMARK 500 GLU B1032 -6.66 -58.81 REMARK 500 ARG B1068 -129.33 57.52 REMARK 500 PHE B1160 12.86 -147.33 REMARK 500 SER B1180 -63.31 -90.07 REMARK 500 ILE B1183 -56.65 -128.10 REMARK 500 CYS B1217 37.32 -93.85 REMARK 500 VAL B1218 -46.23 -133.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B1415 DISTANCE = 7.76 ANGSTROMS REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PX4 A 1301 REMARK 610 PX4 A 1302 REMARK 610 PX4 A 1303 REMARK 610 PX4 A 1304 REMARK 610 PX4 B 1301 REMARK 610 PX4 B 1302 REMARK 610 PX4 B 1303 REMARK 610 PX4 B 1304 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PX4 A 1301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PX4 A 1302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PX4 A 1303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PX4 A 1304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 1305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PX4 B 1301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PX4 B 1302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PX4 B 1303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PX4 B 1304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 1305 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6MVV RELATED DB: PDB REMARK 900 SAME PROTEIN CRYSTALLIZED IN DIFFERENT EXPERIMENTS, ALL REPORTED IN REMARK 900 SAME PUBLICATION REMARK 900 RELATED ID: 6MVW RELATED DB: PDB REMARK 900 RELATED ID: 6MVX RELATED DB: PDB DBREF 6MVY A 1001 1226 UNP A8EVM5 A8EVM5_ARCB4 1 226 DBREF 6MVY B 1001 1226 UNP A8EVM5 A8EVM5_ARCB4 1 226 SEQADV 6MVY MET A 983 UNP A8EVM5 INITIATING METHIONINE SEQADV 6MVY ASP A 984 UNP A8EVM5 EXPRESSION TAG SEQADV 6MVY TYR A 985 UNP A8EVM5 EXPRESSION TAG SEQADV 6MVY LYS A 986 UNP A8EVM5 EXPRESSION TAG SEQADV 6MVY ASP A 987 UNP A8EVM5 EXPRESSION TAG SEQADV 6MVY ASP A 988 UNP A8EVM5 EXPRESSION TAG SEQADV 6MVY ASP A 989 UNP A8EVM5 EXPRESSION TAG SEQADV 6MVY ASP A 990 UNP A8EVM5 EXPRESSION TAG SEQADV 6MVY LYS A 991 UNP A8EVM5 EXPRESSION TAG SEQADV 6MVY GLY A 992 UNP A8EVM5 EXPRESSION TAG SEQADV 6MVY SER A 993 UNP A8EVM5 EXPRESSION TAG SEQADV 6MVY LEU A 994 UNP A8EVM5 EXPRESSION TAG SEQADV 6MVY VAL A 995 UNP A8EVM5 EXPRESSION TAG SEQADV 6MVY PRO A 996 UNP A8EVM5 EXPRESSION TAG SEQADV 6MVY ARG A 997 UNP A8EVM5 EXPRESSION TAG SEQADV 6MVY GLY A 998 UNP A8EVM5 EXPRESSION TAG SEQADV 6MVY SER A 999 UNP A8EVM5 EXPRESSION TAG SEQADV 6MVY HIS A 1000 UNP A8EVM5 EXPRESSION TAG SEQADV 6MVY CYS A 1217 UNP A8EVM5 ILE 217 ENGINEERED MUTATION SEQADV 6MVY MET B 983 UNP A8EVM5 INITIATING METHIONINE SEQADV 6MVY ASP B 984 UNP A8EVM5 EXPRESSION TAG SEQADV 6MVY TYR B 985 UNP A8EVM5 EXPRESSION TAG SEQADV 6MVY LYS B 986 UNP A8EVM5 EXPRESSION TAG SEQADV 6MVY ASP B 987 UNP A8EVM5 EXPRESSION TAG SEQADV 6MVY ASP B 988 UNP A8EVM5 EXPRESSION TAG SEQADV 6MVY ASP B 989 UNP A8EVM5 EXPRESSION TAG SEQADV 6MVY ASP B 990 UNP A8EVM5 EXPRESSION TAG SEQADV 6MVY LYS B 991 UNP A8EVM5 EXPRESSION TAG SEQADV 6MVY GLY B 992 UNP A8EVM5 EXPRESSION TAG SEQADV 6MVY SER B 993 UNP A8EVM5 EXPRESSION TAG SEQADV 6MVY LEU B 994 UNP A8EVM5 EXPRESSION TAG SEQADV 6MVY VAL B 995 UNP A8EVM5 EXPRESSION TAG SEQADV 6MVY PRO B 996 UNP A8EVM5 EXPRESSION TAG SEQADV 6MVY ARG B 997 UNP A8EVM5 EXPRESSION TAG SEQADV 6MVY GLY B 998 UNP A8EVM5 EXPRESSION TAG SEQADV 6MVY SER B 999 UNP A8EVM5 EXPRESSION TAG SEQADV 6MVY HIS B 1000 UNP A8EVM5 EXPRESSION TAG SEQADV 6MVY CYS B 1217 UNP A8EVM5 ILE 217 ENGINEERED MUTATION SEQRES 1 A 244 MET ASP TYR LYS ASP ASP ASP ASP LYS GLY SER LEU VAL SEQRES 2 A 244 PRO ARG GLY SER HIS MET TYR LEU ARG ILE THR ASN ILE SEQRES 3 A 244 VAL GLU SER SER PHE PHE THR LYS PHE ILE ILE TYR LEU SEQRES 4 A 244 ILE VAL LEU ASN GLY ILE THR MET GLY LEU GLU THR SER SEQRES 5 A 244 LYS THR PHE MET GLN SER PHE GLY VAL TYR THR THR LEU SEQRES 6 A 244 PHE ASN GLN ILE VAL ILE THR ILE PHE THR ILE GLU ILE SEQRES 7 A 244 ILE LEU ARG ILE TYR VAL HIS ARG ILE SER PHE PHE LYS SEQRES 8 A 244 ASP PRO TRP SER LEU PHE ASP PHE PHE VAL VAL ALA ILE SEQRES 9 A 244 SER LEU VAL PRO THR SER SER GLY PHE GLU ILE LEU ARG SEQRES 10 A 244 VAL LEU ARG VAL LEU ARG LEU PHE ARG LEU VAL THR ALA SEQRES 11 A 244 VAL PRO GLN MET ARG LYS ILE VAL SER ALA LEU ILE SER SEQRES 12 A 244 VAL ILE PRO GLY MET LEU SER VAL ILE ALA LEU MET THR SEQRES 13 A 244 LEU PHE PHE TYR ILE PHE ALA ILE MET ALA THR GLN LEU SEQRES 14 A 244 PHE GLY GLU ARG PHE PRO GLU TRP PHE GLY THR LEU GLY SEQRES 15 A 244 GLU SER PHE TYR THR LEU PHE GLN VAL MET THR LEU GLU SEQRES 16 A 244 SER TRP SER MET GLY ILE VAL ARG PRO LEU MET GLU VAL SEQRES 17 A 244 TYR PRO TYR ALA TRP VAL PHE PHE ILE PRO PHE ILE PHE SEQRES 18 A 244 VAL VAL THR PHE VAL MET ILE ASN LEU VAL VAL ALA ILE SEQRES 19 A 244 CYS VAL ASP ALA MET ALA ILE LEU ASN GLN SEQRES 1 B 244 MET ASP TYR LYS ASP ASP ASP ASP LYS GLY SER LEU VAL SEQRES 2 B 244 PRO ARG GLY SER HIS MET TYR LEU ARG ILE THR ASN ILE SEQRES 3 B 244 VAL GLU SER SER PHE PHE THR LYS PHE ILE ILE TYR LEU SEQRES 4 B 244 ILE VAL LEU ASN GLY ILE THR MET GLY LEU GLU THR SER SEQRES 5 B 244 LYS THR PHE MET GLN SER PHE GLY VAL TYR THR THR LEU SEQRES 6 B 244 PHE ASN GLN ILE VAL ILE THR ILE PHE THR ILE GLU ILE SEQRES 7 B 244 ILE LEU ARG ILE TYR VAL HIS ARG ILE SER PHE PHE LYS SEQRES 8 B 244 ASP PRO TRP SER LEU PHE ASP PHE PHE VAL VAL ALA ILE SEQRES 9 B 244 SER LEU VAL PRO THR SER SER GLY PHE GLU ILE LEU ARG SEQRES 10 B 244 VAL LEU ARG VAL LEU ARG LEU PHE ARG LEU VAL THR ALA SEQRES 11 B 244 VAL PRO GLN MET ARG LYS ILE VAL SER ALA LEU ILE SER SEQRES 12 B 244 VAL ILE PRO GLY MET LEU SER VAL ILE ALA LEU MET THR SEQRES 13 B 244 LEU PHE PHE TYR ILE PHE ALA ILE MET ALA THR GLN LEU SEQRES 14 B 244 PHE GLY GLU ARG PHE PRO GLU TRP PHE GLY THR LEU GLY SEQRES 15 B 244 GLU SER PHE TYR THR LEU PHE GLN VAL MET THR LEU GLU SEQRES 16 B 244 SER TRP SER MET GLY ILE VAL ARG PRO LEU MET GLU VAL SEQRES 17 B 244 TYR PRO TYR ALA TRP VAL PHE PHE ILE PRO PHE ILE PHE SEQRES 18 B 244 VAL VAL THR PHE VAL MET ILE ASN LEU VAL VAL ALA ILE SEQRES 19 B 244 CYS VAL ASP ALA MET ALA ILE LEU ASN GLN HET PX4 A1301 32 HET PX4 A1302 34 HET PX4 A1303 40 HET PX4 A1304 18 HET SO4 A1305 5 HET PX4 B1301 31 HET PX4 B1302 35 HET PX4 B1303 40 HET PX4 B1304 21 HET SO4 B1305 5 HETNAM PX4 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE HETNAM SO4 SULFATE ION FORMUL 3 PX4 8(C36 H73 N O8 P 1+) FORMUL 7 SO4 2(O4 S 2-) FORMUL 13 HOH *39(H2 O) HELIX 1 AA1 HIS A 1000 GLU A 1010 1 11 HELIX 2 AA2 SER A 1011 GLU A 1032 1 22 HELIX 3 AA3 SER A 1034 ARG A 1068 1 35 HELIX 4 AA4 ARG A 1068 LYS A 1073 1 6 HELIX 5 AA5 ASP A 1074 VAL A 1089 1 16 HELIX 6 AA6 ILE A 1097 ARG A 1102 1 6 HELIX 7 AA7 VAL A 1103 LEU A 1106 5 4 HELIX 8 AA8 PHE A 1107 VAL A 1113 1 7 HELIX 9 AA9 VAL A 1113 GLY A 1153 1 41 HELIX 10 AB1 PHE A 1156 GLY A 1161 1 6 HELIX 11 AB2 THR A 1162 THR A 1175 1 14 HELIX 12 AB3 SER A 1178 ILE A 1183 1 6 HELIX 13 AB4 ILE A 1183 GLU A 1189 1 7 HELIX 14 AB5 ALA A 1194 LEU A 1224 1 31 HELIX 15 AB6 HIS B 1000 GLU B 1010 1 11 HELIX 16 AB7 SER B 1011 GLU B 1032 1 22 HELIX 17 AB8 SER B 1034 ARG B 1068 1 35 HELIX 18 AB9 ARG B 1068 LYS B 1073 1 6 HELIX 19 AC1 ASP B 1074 VAL B 1089 1 16 HELIX 20 AC2 ILE B 1097 ARG B 1102 1 6 HELIX 21 AC3 VAL B 1103 LEU B 1106 5 4 HELIX 22 AC4 PHE B 1107 VAL B 1113 1 7 HELIX 23 AC5 VAL B 1113 GLY B 1153 1 41 HELIX 24 AC6 PHE B 1156 GLY B 1161 1 6 HELIX 25 AC7 THR B 1162 THR B 1175 1 14 HELIX 26 AC8 SER B 1178 ILE B 1183 1 6 HELIX 27 AC9 ILE B 1183 GLU B 1189 1 7 HELIX 28 AD1 ALA B 1194 LEU B 1224 1 31 SITE 1 AC1 6 ILE A1097 LEU A1151 PHE A1152 TYR A1191 SITE 2 AC1 6 ALA A1194 HOH A1418 SITE 1 AC2 12 MET A1137 GLY A1164 GLU A1165 PHE A1167 SITE 2 AC2 12 TYR A1168 PHE A1171 MET A1188 PRO A1192 SITE 3 AC2 12 TRP A1195 MET A1209 PX4 A1303 HOH A1413 SITE 1 AC3 13 ILE A1022 GLY A1026 ILE A1027 GLY A1030 SITE 2 AC3 13 SER A1034 THR A1036 LEU A1109 THR A1138 SITE 3 AC3 13 TYR A1142 THR A1162 GLY A1164 PX4 A1302 SITE 4 AC3 13 HOH A1402 SITE 1 AC4 6 PRO A1075 TRP A1076 VAL A1120 SER A1121 SITE 2 AC4 6 ILE A1124 SER A1125 SITE 1 AC5 7 PHE A1156 PRO A1157 GLU A1158 TRP A1159 SITE 2 AC5 7 HOH A1405 SO4 B1305 HOH B1402 SITE 1 AC6 5 ILE B1097 TYR B1191 TYR B1193 ALA B1194 SITE 2 AC6 5 HOH B1411 SITE 1 AC7 11 MET B1137 GLY B1164 GLU B1165 PHE B1167 SITE 2 AC7 11 TYR B1168 PHE B1171 MET B1188 PRO B1192 SITE 3 AC7 11 TRP B1195 PX4 B1303 HOH B1401 SITE 1 AC8 12 ILE B1022 GLY B1026 ILE B1027 GLY B1030 SITE 2 AC8 12 SER B1034 THR B1138 TYR B1142 THR B1162 SITE 3 AC8 12 LEU B1163 GLY B1164 PX4 B1302 HOH B1410 SITE 1 AC9 3 TRP B1076 SER B1121 ILE B1124 SITE 1 AD1 7 SO4 A1305 HOH A1405 PHE B1156 PRO B1157 SITE 2 AD1 7 GLU B1158 TRP B1159 HOH B1402 CRYST1 126.596 126.596 192.219 90.00 90.00 90.00 I 4 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007899 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007899 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005202 0.00000