HEADER TRANSFERASE 30-OCT-18 6MX8 TITLE CRYSTAL STRUCTURE OF ANAPLASTIC LYMPHOMA KINASE (ALK) BOUND BY TITLE 2 BRIGATINIB COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALK TYROSINE KINASE RECEPTOR; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ANAPLASTIC LYMPHOMA KINASE; COMPND 5 EC: 2.7.10.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ALK; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS ALK KINASE, BRIGATINIB, TYROSINE KINASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR D.R.DOUGAN,T.ZHOU REVDAT 2 13-MAR-24 6MX8 1 REMARK REVDAT 1 12-DEC-18 6MX8 0 SPRSDE 12-DEC-18 6MX8 5J7H JRNL AUTH W.S.HUANG,S.LIU,D.ZOU,M.THOMAS,Y.WANG,T.ZHOU,J.ROMERO, JRNL AUTH 2 A.KOHLMANN,F.LI,J.QI,L.CAI,T.A.DWIGHT,Y.XU,R.XU,R.DODD, JRNL AUTH 3 A.TOMS,L.PARILLON,X.LU,R.ANJUM,S.ZHANG,F.WANG,J.KEATS, JRNL AUTH 4 S.D.WARDWELL,Y.NING,Q.XU,L.E.MORAN,Q.K.MOHEMMAD,H.G.JANG, JRNL AUTH 5 T.CLACKSON,N.I.NARASIMHAN,V.M.RIVERA,X.ZHU,D.DALGARNO, JRNL AUTH 6 W.C.SHAKESPEARE JRNL TITL DISCOVERY OF BRIGATINIB (AP26113), A PHOSPHINE JRNL TITL 2 OXIDE-CONTAINING, POTENT, ORALLY ACTIVE INHIBITOR OF JRNL TITL 3 ANAPLASTIC LYMPHOMA KINASE. JRNL REF J. MED. CHEM. V. 59 4948 2016 JRNL REFN ISSN 1520-4804 JRNL PMID 27144831 JRNL DOI 10.1021/ACS.JMEDCHEM.6B00306 REMARK 2 REMARK 2 RESOLUTION. 1.96 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0230 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.96 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.8 REMARK 3 NUMBER OF REFLECTIONS : 20562 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1038 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.96 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.01 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1294 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 81.12 REMARK 3 BIN R VALUE (WORKING SET) : 0.2740 REMARK 3 BIN FREE R VALUE SET COUNT : 64 REMARK 3 BIN FREE R VALUE : 0.2870 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2218 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 40 REMARK 3 SOLVENT ATOMS : 65 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.54 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.14000 REMARK 3 B22 (A**2) : -2.59000 REMARK 3 B33 (A**2) : 3.73000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.170 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.156 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.124 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.472 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.939 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2323 ; 0.008 ; 0.014 REMARK 3 BOND LENGTHS OTHERS (A): 2063 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3150 ; 1.313 ; 1.683 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4860 ; 0.869 ; 1.621 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 281 ; 6.022 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 114 ;33.130 ;22.105 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 391 ;13.757 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;16.085 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 297 ; 0.062 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2592 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 403 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1094 A 1112 REMARK 3 ORIGIN FOR THE GROUP (A): 7.596 -2.537 16.593 REMARK 3 T TENSOR REMARK 3 T11: 0.4239 T22: 0.0993 REMARK 3 T33: 0.1940 T12: -0.1714 REMARK 3 T13: -0.2684 T23: 0.1090 REMARK 3 L TENSOR REMARK 3 L11: 0.0811 L22: 3.7335 REMARK 3 L33: 2.8967 L12: -0.5438 REMARK 3 L13: 0.4181 L23: -3.0230 REMARK 3 S TENSOR REMARK 3 S11: -0.0578 S12: -0.0270 S13: 0.0439 REMARK 3 S21: 0.0057 S22: 0.2083 S23: -0.2064 REMARK 3 S31: 0.4191 S32: -0.3849 S33: -0.1505 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1113 A 1144 REMARK 3 ORIGIN FOR THE GROUP (A): -2.189 10.521 2.383 REMARK 3 T TENSOR REMARK 3 T11: 0.2254 T22: 0.1628 REMARK 3 T33: 0.0830 T12: 0.0328 REMARK 3 T13: -0.1004 T23: 0.0026 REMARK 3 L TENSOR REMARK 3 L11: 0.0501 L22: 3.6001 REMARK 3 L33: 2.5506 L12: 0.0855 REMARK 3 L13: 0.3011 L23: 1.0569 REMARK 3 S TENSOR REMARK 3 S11: -0.0214 S12: -0.0051 S13: 0.0140 REMARK 3 S21: -0.8119 S22: -0.2127 S23: 0.2015 REMARK 3 S31: -0.3526 S32: -0.2964 S33: 0.2340 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1145 A 1173 REMARK 3 ORIGIN FOR THE GROUP (A): 9.610 4.709 7.228 REMARK 3 T TENSOR REMARK 3 T11: 0.0908 T22: 0.1438 REMARK 3 T33: 0.1500 T12: -0.0253 REMARK 3 T13: -0.0370 T23: 0.0575 REMARK 3 L TENSOR REMARK 3 L11: 0.5428 L22: 1.4689 REMARK 3 L33: 1.5345 L12: -0.2655 REMARK 3 L13: 0.3610 L23: 0.5974 REMARK 3 S TENSOR REMARK 3 S11: -0.1148 S12: 0.1246 S13: 0.0673 REMARK 3 S21: 0.0508 S22: -0.0279 S23: -0.2917 REMARK 3 S31: -0.2490 S32: 0.1887 S33: 0.1427 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1174 A 1243 REMARK 3 ORIGIN FOR THE GROUP (A): 5.327 19.497 16.176 REMARK 3 T TENSOR REMARK 3 T11: 0.1340 T22: 0.1330 REMARK 3 T33: 0.1149 T12: 0.0053 REMARK 3 T13: -0.0441 T23: 0.0492 REMARK 3 L TENSOR REMARK 3 L11: 0.3842 L22: 0.7125 REMARK 3 L33: 0.2173 L12: 0.4437 REMARK 3 L13: 0.1093 L23: 0.3111 REMARK 3 S TENSOR REMARK 3 S11: -0.0370 S12: 0.0326 S13: 0.1128 REMARK 3 S21: -0.0192 S22: 0.0458 S23: 0.1036 REMARK 3 S31: 0.0428 S32: -0.0164 S33: -0.0089 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1244 A 1292 REMARK 3 ORIGIN FOR THE GROUP (A): 11.903 18.098 16.264 REMARK 3 T TENSOR REMARK 3 T11: 0.1176 T22: 0.1574 REMARK 3 T33: 0.1087 T12: -0.0070 REMARK 3 T13: -0.0436 T23: 0.0052 REMARK 3 L TENSOR REMARK 3 L11: 0.3331 L22: 0.7942 REMARK 3 L33: 0.6383 L12: 0.2722 REMARK 3 L13: -0.3452 L23: 0.1100 REMARK 3 S TENSOR REMARK 3 S11: -0.0979 S12: 0.0568 S13: 0.0341 REMARK 3 S21: -0.1275 S22: 0.1351 S23: 0.0667 REMARK 3 S31: 0.0581 S32: 0.0341 S33: -0.0372 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1293 A 1375 REMARK 3 ORIGIN FOR THE GROUP (A): 23.566 27.359 21.238 REMARK 3 T TENSOR REMARK 3 T11: 0.1122 T22: 0.1780 REMARK 3 T33: 0.0772 T12: -0.0046 REMARK 3 T13: -0.0243 T23: -0.0040 REMARK 3 L TENSOR REMARK 3 L11: 0.9373 L22: 0.5651 REMARK 3 L33: 0.2987 L12: 0.1428 REMARK 3 L13: -0.5105 L23: -0.1679 REMARK 3 S TENSOR REMARK 3 S11: -0.0113 S12: -0.0639 S13: 0.0713 REMARK 3 S21: -0.0256 S22: 0.0442 S23: -0.0017 REMARK 3 S31: 0.0103 S32: 0.0568 S33: -0.0329 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1376 A 1400 REMARK 3 ORIGIN FOR THE GROUP (A): 9.414 32.701 29.526 REMARK 3 T TENSOR REMARK 3 T11: 0.1272 T22: 0.1072 REMARK 3 T33: 0.1246 T12: 0.0380 REMARK 3 T13: 0.0193 T23: -0.0208 REMARK 3 L TENSOR REMARK 3 L11: 1.5054 L22: 3.3466 REMARK 3 L33: 0.2779 L12: -0.4512 REMARK 3 L13: 0.2973 L23: -0.8976 REMARK 3 S TENSOR REMARK 3 S11: 0.0045 S12: -0.2478 S13: -0.0168 REMARK 3 S21: -0.0427 S22: 0.1214 S23: 0.3471 REMARK 3 S31: 0.0218 S32: -0.0392 S33: -0.1259 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 6MX8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-OCT-18. REMARK 100 THE DEPOSITION ID IS D_1000237658. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-MAY-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU ULTRAX 18 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23040 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.960 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.3200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.96 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 50.00 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS HCL PH 8.5, 19-27% PEG REMARK 280 3350, 2 MM TCEP, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 277.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.94550 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.99300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.75100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.99300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.94550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 28.75100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1125 REMARK 465 ALA A 1126 REMARK 465 PHE A 1127 REMARK 465 GLY A 1137 REMARK 465 MET A 1138 REMARK 465 PRO A 1139 REMARK 465 ASN A 1140 REMARK 465 ASP A 1141 REMARK 465 PRO A 1142 REMARK 465 SER A 1143 REMARK 465 SER A 1216 REMARK 465 GLN A 1217 REMARK 465 ARG A 1275 REMARK 465 ASP A 1276 REMARK 465 ILE A 1277 REMARK 465 TYR A 1278 REMARK 465 ARG A 1279 REMARK 465 ALA A 1280 REMARK 465 SER A 1281 REMARK 465 TYR A 1282 REMARK 465 TYR A 1283 REMARK 465 ARG A 1284 REMARK 465 LYS A 1285 REMARK 465 GLY A 1286 REMARK 465 GLY A 1287 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1658 O HOH A 1665 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A1219 54.10 -118.75 REMARK 500 ARG A1248 -4.90 84.31 REMARK 500 ASP A1249 49.57 -156.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 6GY A 1500 DBREF 6MX8 A 1094 1400 UNP Q9UM73 ALK_HUMAN 1094 1400 SEQRES 1 A 307 PRO ASN TYR CYS PHE ALA GLY LYS THR SER SER ILE SER SEQRES 2 A 307 ASP LEU LYS GLU VAL PRO ARG LYS ASN ILE THR LEU ILE SEQRES 3 A 307 ARG GLY LEU GLY HIS GLY ALA PHE GLY GLU VAL TYR GLU SEQRES 4 A 307 GLY GLN VAL SER GLY MET PRO ASN ASP PRO SER PRO LEU SEQRES 5 A 307 GLN VAL ALA VAL LYS THR LEU PRO GLU VAL CYS SER GLU SEQRES 6 A 307 GLN ASP GLU LEU ASP PHE LEU MET GLU ALA LEU ILE ILE SEQRES 7 A 307 SER LYS PHE ASN HIS GLN ASN ILE VAL ARG CYS ILE GLY SEQRES 8 A 307 VAL SER LEU GLN SER LEU PRO ARG PHE ILE LEU LEU GLU SEQRES 9 A 307 LEU MET ALA GLY GLY ASP LEU LYS SER PHE LEU ARG GLU SEQRES 10 A 307 THR ARG PRO ARG PRO SER GLN PRO SER SER LEU ALA MET SEQRES 11 A 307 LEU ASP LEU LEU HIS VAL ALA ARG ASP ILE ALA CYS GLY SEQRES 12 A 307 CYS GLN TYR LEU GLU GLU ASN HIS PHE ILE HIS ARG ASP SEQRES 13 A 307 ILE ALA ALA ARG ASN CYS LEU LEU THR CYS PRO GLY PRO SEQRES 14 A 307 GLY ARG VAL ALA LYS ILE GLY ASP PHE GLY MET ALA ARG SEQRES 15 A 307 ASP ILE TYR ARG ALA SER TYR TYR ARG LYS GLY GLY CYS SEQRES 16 A 307 ALA MET LEU PRO VAL LYS TRP MET PRO PRO GLU ALA PHE SEQRES 17 A 307 MET GLU GLY ILE PHE THR SER LYS THR ASP THR TRP SER SEQRES 18 A 307 PHE GLY VAL LEU LEU TRP GLU ILE PHE SER LEU GLY TYR SEQRES 19 A 307 MET PRO TYR PRO SER LYS SER ASN GLN GLU VAL LEU GLU SEQRES 20 A 307 PHE VAL THR SER GLY GLY ARG MET ASP PRO PRO LYS ASN SEQRES 21 A 307 CYS PRO GLY PRO VAL TYR ARG ILE MET THR GLN CYS TRP SEQRES 22 A 307 GLN HIS GLN PRO GLU ASP ARG PRO ASN PHE ALA ILE ILE SEQRES 23 A 307 LEU GLU ARG ILE GLU TYR CYS THR GLN ASP PRO ASP VAL SEQRES 24 A 307 ILE ASN THR ALA LEU PRO ILE GLU HET 6GY A1500 40 HETNAM 6GY 5-CHLORO-N~4~-[2-(DIMETHYLPHOSPHORYL)PHENYL]-N~2~-{2- HETNAM 2 6GY METHOXY-4-[4-(4-METHYLPIPERAZIN-1-YL)PIPERIDIN-1- HETNAM 3 6GY YL]PHENYL}PYRIMIDINE-2,4-DIAMINE HETSYN 6GY BRIGATINIB FORMUL 2 6GY C29 H39 CL N7 O2 P FORMUL 3 HOH *65(H2 O) HELIX 1 AA1 SER A 1106 LEU A 1108 5 3 HELIX 2 AA2 PRO A 1112 LYS A 1114 5 3 HELIX 3 AA3 SER A 1157 PHE A 1174 1 18 HELIX 4 AA4 LEU A 1204 THR A 1211 1 8 HELIX 5 AA5 ALA A 1222 ASN A 1243 1 22 HELIX 6 AA6 ALA A 1251 ARG A 1253 5 3 HELIX 7 AA7 PRO A 1292 MET A 1296 5 5 HELIX 8 AA8 PRO A 1297 GLY A 1304 1 8 HELIX 9 AA9 THR A 1307 LEU A 1325 1 19 HELIX 10 AB1 SER A 1334 SER A 1344 1 11 HELIX 11 AB2 PRO A 1355 TRP A 1366 1 12 HELIX 12 AB3 GLN A 1369 ARG A 1373 5 5 HELIX 13 AB4 ASN A 1375 ASP A 1389 1 15 HELIX 14 AB5 ASP A 1389 ASN A 1394 1 6 SHEET 1 AA1 2 ASN A1095 PHE A1098 0 SHEET 2 AA1 2 LYS A1101 SER A1104 -1 O SER A1103 N TYR A1096 SHEET 1 AA2 5 ILE A1116 GLY A1123 0 SHEET 2 AA2 5 VAL A1130 VAL A1135 -1 O GLU A1132 N ARG A1120 SHEET 3 AA2 5 LEU A1145 THR A1151 -1 O LEU A1145 N VAL A1135 SHEET 4 AA2 5 PHE A1193 GLU A1197 -1 O LEU A1196 N ALA A1148 SHEET 5 AA2 5 CYS A1182 SER A1186 -1 N GLY A1184 O LEU A1195 SHEET 1 AA3 3 GLY A1202 ASP A1203 0 SHEET 2 AA3 3 CYS A1255 LEU A1257 -1 O LEU A1257 N GLY A1202 SHEET 3 AA3 3 ALA A1266 ILE A1268 -1 O LYS A1267 N LEU A1256 CISPEP 1 LEU A 1190 PRO A 1191 0 -6.54 SITE 1 AC1 11 LEU A1122 ALA A1148 LEU A1196 GLU A1197 SITE 2 AC1 11 MET A1199 ALA A1200 GLY A1202 GLU A1210 SITE 3 AC1 11 ARG A1253 LEU A1256 ASP A1270 CRYST1 51.891 57.502 103.986 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019271 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017391 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009617 0.00000