HEADER ISOMERASE 01-DEC-18 6N98 TITLE XYLOSE ISOMERASE 1F1 VARIANT FROM STREPTOMYCES SP. F-1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: XYLOSE ISOMERASE; COMPND 3 CHAIN: A; COMPND 4 EC: 5.3.1.5; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES SP. F-1; SOURCE 3 ORGANISM_TAXID: 463642; SOURCE 4 GENE: XYLA_2, XYLA, STEPF1_06097; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS WILD TYPE, ISOMERASE, BACTERIA EXPDTA X-RAY DIFFRACTION AUTHOR R.Y.MIYAMOTO,P.S.VIEIRA,M.T.MURAKAMI,L.M.ZANPHORLIN REVDAT 3 11-OCT-23 6N98 1 REMARK REVDAT 2 03-JUN-20 6N98 1 JRNL REVDAT 1 04-DEC-19 6N98 0 JRNL AUTH R.Y.MIYAMOTO,A.S.DE SOUSA,P.S.VIEIRA,R.R.DE MELO, JRNL AUTH 2 J.A.SCARPASSA,C.H.I.RAMOS,M.T.MURAKAMI,R.RULLER, JRNL AUTH 3 L.M.ZANPHORLIN JRNL TITL CRYSTAL STRUCTURE OF A NOVEL XYLOSE ISOMERASE FROM JRNL TITL 2 STREPTOMYCES SP. F-1 REVEALED THE PRESENCE OF UNIQUE JRNL TITL 3 FEATURES THAT DIFFER FROM CONVENTIONAL CLASSES. JRNL REF BIOCHIM BIOPHYS ACTA GEN V.1864 29549 2020 JRNL REF 2 SUBJ JRNL REFN ISSN 1872-8006 JRNL PMID 32035160 JRNL DOI 10.1016/J.BBAGEN.2020.129549 REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (DEV_3139: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.77 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 89.4 REMARK 3 NUMBER OF REFLECTIONS : 52504 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.214 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 2641 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 31.7769 - 4.1312 0.99 3046 185 0.1431 0.1422 REMARK 3 2 4.1312 - 3.2801 0.97 2917 150 0.1506 0.1633 REMARK 3 3 3.2801 - 2.8658 0.97 2917 134 0.1727 0.2072 REMARK 3 4 2.8658 - 2.6039 0.96 2779 178 0.1826 0.2047 REMARK 3 5 2.6039 - 2.4174 0.96 2804 176 0.1816 0.2005 REMARK 3 6 2.4174 - 2.2749 0.94 2747 150 0.1777 0.2311 REMARK 3 7 2.2749 - 2.1610 0.82 2430 99 0.2774 0.3119 REMARK 3 8 2.1610 - 2.0669 0.90 2639 113 0.2188 0.2770 REMARK 3 9 2.0669 - 1.9874 0.90 2671 118 0.2416 0.2794 REMARK 3 10 1.9874 - 1.9188 0.75 2202 103 0.3198 0.3664 REMARK 3 11 1.9188 - 1.8588 0.69 2035 103 0.4244 0.4659 REMARK 3 12 1.8588 - 1.8057 0.92 2679 164 0.2038 0.2600 REMARK 3 13 1.8057 - 1.7581 0.92 2661 150 0.1945 0.2410 REMARK 3 14 1.7581 - 1.7153 0.92 2627 151 0.2160 0.2903 REMARK 3 15 1.7153 - 1.6763 0.91 2639 137 0.2434 0.2693 REMARK 3 16 1.6763 - 1.6406 0.91 2674 134 0.2101 0.2428 REMARK 3 17 1.6406 - 1.6078 0.89 2587 134 0.1985 0.2379 REMARK 3 18 1.6078 - 1.5774 0.85 2460 130 0.1996 0.2605 REMARK 3 19 1.5774 - 1.5500 0.81 2349 132 0.2213 0.2756 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.100 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 3120 REMARK 3 ANGLE : 0.817 4231 REMARK 3 CHIRALITY : 0.048 435 REMARK 3 PLANARITY : 0.006 564 REMARK 3 DIHEDRAL : 15.673 1829 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 4:19) REMARK 3 ORIGIN FOR THE GROUP (A): 26.7231 13.1794 72.7267 REMARK 3 T TENSOR REMARK 3 T11: 0.2721 T22: 0.2904 REMARK 3 T33: 0.2055 T12: 0.0460 REMARK 3 T13: 0.0296 T23: -0.0475 REMARK 3 L TENSOR REMARK 3 L11: 4.2726 L22: 4.2324 REMARK 3 L33: 0.3090 L12: -1.8484 REMARK 3 L13: 0.0264 L23: -1.0405 REMARK 3 S TENSOR REMARK 3 S11: -0.2817 S12: -0.8691 S13: 0.3945 REMARK 3 S21: 0.6031 S22: 0.1096 S23: -0.1812 REMARK 3 S31: -0.3224 S32: -0.4280 S33: 0.1651 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 20:39) REMARK 3 ORIGIN FOR THE GROUP (A): 16.5194 1.2488 59.0230 REMARK 3 T TENSOR REMARK 3 T11: 0.2059 T22: 0.2969 REMARK 3 T33: 0.2490 T12: 0.0087 REMARK 3 T13: 0.0362 T23: -0.0047 REMARK 3 L TENSOR REMARK 3 L11: 7.2770 L22: 5.3856 REMARK 3 L33: 8.1660 L12: -5.4345 REMARK 3 L13: -4.9108 L23: 6.1712 REMARK 3 S TENSOR REMARK 3 S11: 0.3825 S12: 0.5265 S13: -0.0196 REMARK 3 S21: -0.5087 S22: -0.4891 S23: 0.1997 REMARK 3 S31: -0.2633 S32: -0.6575 S33: 0.1537 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 40:81) REMARK 3 ORIGIN FOR THE GROUP (A): 13.4154 16.0340 66.5144 REMARK 3 T TENSOR REMARK 3 T11: 0.1759 T22: 0.3169 REMARK 3 T33: 0.2829 T12: 0.0724 REMARK 3 T13: 0.0333 T23: -0.0530 REMARK 3 L TENSOR REMARK 3 L11: 1.6851 L22: 1.7496 REMARK 3 L33: 2.5163 L12: 0.1595 REMARK 3 L13: 0.1818 L23: -0.1190 REMARK 3 S TENSOR REMARK 3 S11: -0.0214 S12: -0.0515 S13: 0.0841 REMARK 3 S21: 0.0709 S22: 0.0058 S23: 0.4214 REMARK 3 S31: -0.1447 S32: -0.5921 S33: 0.0136 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 82:167) REMARK 3 ORIGIN FOR THE GROUP (A): 23.5396 21.2106 46.9835 REMARK 3 T TENSOR REMARK 3 T11: 0.1853 T22: 0.2034 REMARK 3 T33: 0.2165 T12: 0.0783 REMARK 3 T13: 0.0011 T23: -0.0208 REMARK 3 L TENSOR REMARK 3 L11: 0.5125 L22: 0.2602 REMARK 3 L33: 1.8430 L12: 0.2505 REMARK 3 L13: -0.0211 L23: -0.0065 REMARK 3 S TENSOR REMARK 3 S11: 0.0045 S12: -0.0010 S13: 0.0755 REMARK 3 S21: 0.0697 S22: -0.0389 S23: 0.1536 REMARK 3 S31: -0.1935 S32: -0.3365 S33: 0.0271 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 168:192) REMARK 3 ORIGIN FOR THE GROUP (A): 29.3673 20.6973 51.6935 REMARK 3 T TENSOR REMARK 3 T11: 0.2369 T22: 0.1559 REMARK 3 T33: 0.1531 T12: 0.0553 REMARK 3 T13: 0.0087 T23: -0.0127 REMARK 3 L TENSOR REMARK 3 L11: 2.6335 L22: 4.9288 REMARK 3 L33: 0.9890 L12: -1.6535 REMARK 3 L13: -0.6264 L23: 1.2498 REMARK 3 S TENSOR REMARK 3 S11: -0.0139 S12: -0.1626 S13: 0.1607 REMARK 3 S21: 0.0778 S22: 0.0496 S23: 0.1757 REMARK 3 S31: -0.2867 S32: -0.1866 S33: -0.0241 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 193:278) REMARK 3 ORIGIN FOR THE GROUP (A): 38.6421 14.9624 59.6618 REMARK 3 T TENSOR REMARK 3 T11: 0.1207 T22: 0.1126 REMARK 3 T33: 0.1387 T12: 0.0052 REMARK 3 T13: 0.0040 T23: -0.0236 REMARK 3 L TENSOR REMARK 3 L11: 0.7286 L22: 1.3740 REMARK 3 L33: 2.1831 L12: 0.1718 REMARK 3 L13: -0.0370 L23: -0.9697 REMARK 3 S TENSOR REMARK 3 S11: 0.0124 S12: 0.0119 S13: 0.0235 REMARK 3 S21: 0.0624 S22: -0.0465 S23: 0.0737 REMARK 3 S31: -0.1276 S32: -0.0685 S33: 0.0368 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 279:322) REMARK 3 ORIGIN FOR THE GROUP (A): 32.1120 6.9211 72.2500 REMARK 3 T TENSOR REMARK 3 T11: 0.1762 T22: 0.1624 REMARK 3 T33: 0.1484 T12: 0.0072 REMARK 3 T13: 0.0335 T23: -0.0253 REMARK 3 L TENSOR REMARK 3 L11: 3.2094 L22: 1.3318 REMARK 3 L33: 2.0934 L12: 1.5739 REMARK 3 L13: 1.6510 L23: 0.9646 REMARK 3 S TENSOR REMARK 3 S11: 0.0756 S12: -0.1868 S13: 0.0326 REMARK 3 S21: 0.1437 S22: -0.0925 S23: 0.0867 REMARK 3 S31: -0.1227 S32: -0.1644 S33: 0.0242 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN A AND RESID 323:332) REMARK 3 ORIGIN FOR THE GROUP (A): 60.4364 13.2161 76.5103 REMARK 3 T TENSOR REMARK 3 T11: 0.2271 T22: 0.2298 REMARK 3 T33: 0.1841 T12: -0.0635 REMARK 3 T13: -0.0760 T23: -0.0072 REMARK 3 L TENSOR REMARK 3 L11: 7.0594 L22: 6.7383 REMARK 3 L33: 5.4235 L12: 4.0624 REMARK 3 L13: -3.7506 L23: -0.5694 REMARK 3 S TENSOR REMARK 3 S11: 0.2507 S12: -0.5795 S13: 0.2104 REMARK 3 S21: 0.6647 S22: -0.3337 S23: -0.1594 REMARK 3 S31: -0.1647 S32: 0.5028 S33: 0.1296 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN A AND RESID 333:344) REMARK 3 ORIGIN FOR THE GROUP (A): 62.4842 26.3433 66.0581 REMARK 3 T TENSOR REMARK 3 T11: 0.2535 T22: 0.1942 REMARK 3 T33: 0.2323 T12: -0.1182 REMARK 3 T13: -0.0306 T23: -0.0220 REMARK 3 L TENSOR REMARK 3 L11: 7.8500 L22: 4.5889 REMARK 3 L33: 1.9967 L12: 2.9436 REMARK 3 L13: -1.1799 L23: 0.3426 REMARK 3 S TENSOR REMARK 3 S11: 0.1760 S12: 0.0163 S13: 0.3460 REMARK 3 S21: 0.4386 S22: -0.1033 S23: -0.2762 REMARK 3 S31: -0.6434 S32: 0.3977 S33: -0.0187 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN A AND RESID 345:354) REMARK 3 ORIGIN FOR THE GROUP (A): 73.2133 32.7068 56.5578 REMARK 3 T TENSOR REMARK 3 T11: 0.4345 T22: 0.4602 REMARK 3 T33: 0.5090 T12: -0.2510 REMARK 3 T13: 0.0671 T23: 0.0068 REMARK 3 L TENSOR REMARK 3 L11: 2.3227 L22: 5.8122 REMARK 3 L33: 8.5276 L12: -1.6606 REMARK 3 L13: 4.4437 L23: -3.5120 REMARK 3 S TENSOR REMARK 3 S11: -0.0214 S12: -0.0642 S13: 0.3763 REMARK 3 S21: 0.1610 S22: -0.4381 S23: -1.2526 REMARK 3 S31: -0.9439 S32: 0.8174 S33: 0.4036 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: (CHAIN A AND RESID 355:382) REMARK 3 ORIGIN FOR THE GROUP (A): 61.8091 7.7642 70.2861 REMARK 3 T TENSOR REMARK 3 T11: 0.1529 T22: 0.2124 REMARK 3 T33: 0.1757 T12: -0.0130 REMARK 3 T13: -0.0622 T23: -0.0006 REMARK 3 L TENSOR REMARK 3 L11: 5.7961 L22: 3.8849 REMARK 3 L33: 2.8338 L12: 3.1342 REMARK 3 L13: -2.0507 L23: -1.4941 REMARK 3 S TENSOR REMARK 3 S11: -0.1110 S12: -0.1575 S13: -0.1871 REMARK 3 S21: 0.0834 S22: -0.0834 S23: -0.4600 REMARK 3 S31: 0.1092 S32: 0.3901 S33: 0.1544 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6N98 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-DEC-18. REMARK 100 THE DEPOSITION ID IS D_1000238202. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-SEP-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : LNLS REMARK 200 BEAMLINE : W01B-MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.458 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52732 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 89.8 REMARK 200 DATA REDUNDANCY : 12.48 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 18.0800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.64 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 1S5N REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS-TRIS PROPANE PH 7.0 2.5 M REMARK 280 AMMONIUM SULFATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 43.55000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 46.45000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 49.65000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 43.55000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 46.45000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 49.65000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 43.55000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 46.45000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 49.65000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 43.55000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 46.45000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 49.65000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 36900 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 46550 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -428.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 87.10000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 87.10000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 99.30000 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 99.30000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 SER A 3 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 737 O HOH A 788 2.12 REMARK 500 O HOH A 506 O HOH A 814 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 18 -72.88 -81.91 REMARK 500 GLU A 23 34.98 73.83 REMARK 500 ASP A 25 -168.51 -112.85 REMARK 500 ALA A 101 -78.75 -113.06 REMARK 500 GLU A 184 109.84 75.78 REMARK 500 HIS A 206 36.54 -93.20 REMARK 500 ASN A 245 -167.35 -167.04 REMARK 500 HIS A 248 68.27 -108.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 407 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 179 OE2 REMARK 620 2 GLU A 215 OE1 99.8 REMARK 620 3 ASP A 243 OD2 113.1 93.6 REMARK 620 4 ASP A 285 OD2 137.9 86.9 107.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 408 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 215 OE2 REMARK 620 2 ASP A 253 OD1 112.3 REMARK 620 3 ASP A 253 OD2 150.9 54.6 REMARK 620 4 ASP A 255 OD1 84.0 77.6 114.0 REMARK 620 5 HOH A 578 O 73.4 142.5 134.0 66.0 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 408 DBREF1 6N98 A 1 382 UNP A0A1K2FZ20_9ACTN DBREF2 6N98 A A0A1K2FZ20 1 382 SEQRES 1 A 382 MET THR SER PHE GLN PRO THR PRO GLU ASP ARG PHE CYS SEQRES 2 A 382 PHE GLY LEU TRP THR VAL GLY TRP GLN GLU ARG ASP GLN SEQRES 3 A 382 PHE GLY GLU ALA THR ARG ALA PRO LEU ASP PRO VAL ARG SEQRES 4 A 382 THR VAL HIS LYS LEU ALA GLU LEU GLY ALA TRP GLY VAL SEQRES 5 A 382 THR PHE HIS ASP ASP ASP LEU LEU ALA VAL GLU PRO ASN SEQRES 6 A 382 ARG ASP ALA ALA ILE ALA ALA PHE ARG LYS ALA LEU ASP SEQRES 7 A 382 GLU THR GLY LEU VAL VAL PRO ALA ALA THR THR ASP LEU SEQRES 8 A 382 PHE LYS HIS PRO VAL PHE LYS ASP GLY ALA PHE THR SER SEQRES 9 A 382 ASN ASP ARG ASP VAL ARG ARG HIS ALA ILE ARG LYS VAL SEQRES 10 A 382 MET ARG ASN LEU ASP LEU ALA ALA GLU LEU GLY ALA LYS SEQRES 11 A 382 THR TYR VAL PHE TRP GLY GLY ARG GLU GLY ALA GLU SER SEQRES 12 A 382 ASP ALA ALA LYS ASP VAL ARG VAL ALA LEU ASP ARG PHE SEQRES 13 A 382 ARG GLU ALA ILE ASP TYR LEU ALA GLY TYR VAL LYS GLU SEQRES 14 A 382 GLN ASN TYR GLY MET ARG PHE ALA LEU GLU PRO LYS PRO SEQRES 15 A 382 ASN GLU PRO ARG GLY ASP ILE LEU LEU PRO THR ILE GLY SEQRES 16 A 382 HIS ALA LEU GLY PHE ILE SER THR LEU GLU HIS HIS GLU SEQRES 17 A 382 MET VAL GLY LEU ASN PRO GLU VAL GLY HIS GLU GLN MET SEQRES 18 A 382 ALA GLY LEU ASN PHE VAL HIS GLY ILE ALA GLN ALA LEU SEQRES 19 A 382 TRP GLN ASP LYS LEU PHE HIS ILE ASP LEU ASN GLY GLN SEQRES 20 A 382 HIS GLY PRO ARG TYR ASP GLN ASP LEU VAL PHE GLY HIS SEQRES 21 A 382 GLY ASP THR LYS SER ALA PHE PHE LEU VAL ASP LEU LEU SEQRES 22 A 382 GLU SER SER GLY TRP GLU GLY PRO ARG HIS PHE ASP TYR SEQRES 23 A 382 LYS PRO GLY ARG THR GLU ASP ALA GLU ASP VAL TRP VAL SEQRES 24 A 382 SER ALA GLU ALA ASN MET ARG THR TYR LEU ILE LEU LYS SEQRES 25 A 382 GLU ARG ALA LYS ALA PHE ARG ALA ASP PRO GLU VAL GLN SEQRES 26 A 382 GLU ALA MET ARG ALA CYS ARG ILE GLU GLU LEU ALA VAL SEQRES 27 A 382 PRO THR ILE ALA ALA GLY GLU SER TYR GLU ASP LEU ARG SEQRES 28 A 382 ALA GLU GLU PHE ASP ALA GLU ALA ALA ARG ASP ARG GLY SEQRES 29 A 382 TYR HIS TYR SER ARG LEU ASN GLN LEU ALA VAL GLU HIS SEQRES 30 A 382 MET LEU GLY SER ARG HET SO4 A 401 5 HET SO4 A 402 5 HET SO4 A 403 5 HET SO4 A 404 5 HET SO4 A 405 5 HET SO4 A 406 5 HET MG A 407 1 HET MG A 408 1 HETNAM SO4 SULFATE ION HETNAM MG MAGNESIUM ION FORMUL 2 SO4 6(O4 S 2-) FORMUL 8 MG 2(MG 2+) FORMUL 10 HOH *403(H2 O) HELIX 1 AA1 THR A 7 ASP A 10 5 4 HELIX 2 AA2 LEU A 16 GLY A 20 1 5 HELIX 3 AA3 ASP A 36 LEU A 47 1 12 HELIX 4 AA4 ASP A 57 ALA A 61 5 5 HELIX 5 AA5 ASN A 65 GLY A 81 1 17 HELIX 6 AA6 HIS A 94 LYS A 98 5 5 HELIX 7 AA7 ASP A 106 GLY A 128 1 23 HELIX 8 AA8 SER A 143 LYS A 147 5 5 HELIX 9 AA9 ASP A 148 ASN A 171 1 24 HELIX 10 AB1 THR A 193 SER A 202 1 10 HELIX 11 AB2 HIS A 206 GLU A 208 5 3 HELIX 12 AB3 GLU A 215 ALA A 222 1 8 HELIX 13 AB4 ASN A 225 GLN A 236 1 12 HELIX 14 AB5 ASP A 262 GLY A 277 1 16 HELIX 15 AB6 ASP A 293 ASP A 321 1 29 HELIX 16 AB7 ASP A 321 CYS A 331 1 11 HELIX 17 AB8 ARG A 332 VAL A 338 5 7 HELIX 18 AB9 SER A 346 GLU A 353 1 8 HELIX 19 AC1 HIS A 366 LEU A 379 1 14 SHEET 1 AA1 8 VAL A 210 LEU A 212 0 SHEET 2 AA1 8 ARG A 175 LEU A 178 1 N LEU A 178 O GLY A 211 SHEET 3 AA1 8 THR A 131 PHE A 134 1 N TYR A 132 O ARG A 175 SHEET 4 AA1 8 ALA A 86 THR A 88 1 N ALA A 87 O VAL A 133 SHEET 5 AA1 8 GLY A 51 HIS A 55 1 N PHE A 54 O THR A 88 SHEET 6 AA1 8 PHE A 12 GLY A 15 1 N PHE A 14 O THR A 53 SHEET 7 AA1 8 ARG A 282 PHE A 284 1 O PHE A 284 N CYS A 13 SHEET 8 AA1 8 ASP A 243 LEU A 244 1 N LEU A 244 O HIS A 283 SHEET 1 AA2 2 GLY A 140 ALA A 141 0 SHEET 2 AA2 2 ASP A 188 ILE A 189 -1 O ASP A 188 N ALA A 141 LINK OE2 GLU A 179 MG MG A 407 1555 1555 2.62 LINK OE1 GLU A 215 MG MG A 407 1555 1555 1.94 LINK OE2 GLU A 215 MG MG A 408 1555 1555 2.60 LINK OD2 ASP A 243 MG MG A 407 1555 1555 2.42 LINK OD1 ASP A 253 MG MG A 408 1555 1555 2.68 LINK OD2 ASP A 253 MG MG A 408 1555 1555 1.80 LINK OD1 ASP A 255 MG MG A 408 1555 1555 2.70 LINK OD2 ASP A 285 MG MG A 407 1555 1555 2.07 LINK MG MG A 408 O HOH A 578 1555 1555 2.13 CISPEP 1 GLU A 184 PRO A 185 0 13.27 SITE 1 AC1 6 HIS A 112 ARG A 115 ARG A 119 GLU A 354 SITE 2 AC1 6 PHE A 355 HOH A 513 SITE 1 AC2 3 ARG A 369 ARG A 382 HOH A 541 SITE 1 AC3 3 PHE A 4 GLN A 5 ARG A 306 SITE 1 AC4 2 ARG A 66 HOH A 503 SITE 1 AC5 6 PHE A 4 ARG A 314 GLY A 380 SER A 381 SITE 2 AC5 6 HOH A 546 HOH A 760 SITE 1 AC6 5 HIS A 207 GLU A 208 LYS A 238 HOH A 521 SITE 2 AC6 5 HOH A 762 SITE 1 AC7 4 GLU A 179 GLU A 215 ASP A 243 ASP A 285 SITE 1 AC8 5 GLU A 215 HIS A 218 ASP A 253 ASP A 255 SITE 2 AC8 5 HOH A 578 CRYST1 87.100 92.900 99.300 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011481 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010764 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010070 0.00000