HEADER IMMUNE SYSTEM 06-DEC-18 6NB5 TITLE CRYSTAL STRUCTURE OF ANTI- MERS-COV HUMAN NEUTRALIZING LCA60 ANTIBODY TITLE 2 FAB FRAGMENT COMPND MOL_ID: 1; COMPND 2 MOLECULE: LCA60 ANTIGEN-BINDING (FAB) FRAGMENT, HEAVY CHAIN; COMPND 3 CHAIN: H, I; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: LCA60 ANTIGEN-BINDING (FAB) FRAGMENT, LIGHT CHAIN; COMPND 7 CHAIN: L, M; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 13 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS FAB, CORONAVIRUS, MERS-COV, GLYCOPROTEIN, STRUCTURAL GENOMICS, KEYWDS 2 SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE, SSGCID, KEYWDS 3 IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR A.J.WALLS,X.XIONG,Y.J.PARK,M.A.TORTORICI,J.SNIJDER,J.QUISPE, AUTHOR 2 E.CAMERONI,R.GOPAL,M.DAI,A.LANZAVECCHIA,M.ZAMBON,F.A.REY,D.CORTI, AUTHOR 3 D.VEESLER,SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE AUTHOR 4 (SSGCID) REVDAT 6 23-OCT-24 6NB5 1 REMARK REVDAT 5 11-OCT-23 6NB5 1 REMARK REVDAT 4 01-JAN-20 6NB5 1 REMARK REVDAT 3 06-MAR-19 6NB5 1 JRNL REVDAT 2 20-FEB-19 6NB5 1 JRNL REVDAT 1 06-FEB-19 6NB5 0 JRNL AUTH A.C.WALLS,X.XIONG,Y.J.PARK,M.A.TORTORICI,J.SNIJDER,J.QUISPE, JRNL AUTH 2 E.CAMERONI,R.GOPAL,M.DAI,A.LANZAVECCHIA,M.ZAMBON,F.A.REY, JRNL AUTH 3 D.CORTI,D.VEESLER JRNL TITL UNEXPECTED RECEPTOR FUNCTIONAL MIMICRY ELUCIDATES ACTIVATION JRNL TITL 2 OF CORONAVIRUS FUSION. JRNL REF CELL V. 176 1026 2019 JRNL REFN ISSN 1097-4172 JRNL PMID 30712865 JRNL DOI 10.1016/J.CELL.2018.12.028 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0232 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.18 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 16620 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.231 REMARK 3 R VALUE (WORKING SET) : 0.228 REMARK 3 FREE R VALUE : 0.283 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 873 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.08 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1202 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.69 REMARK 3 BIN R VALUE (WORKING SET) : 0.3420 REMARK 3 BIN FREE R VALUE SET COUNT : 68 REMARK 3 BIN FREE R VALUE : 0.3720 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6395 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.34 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.37000 REMARK 3 B22 (A**2) : -4.05000 REMARK 3 B33 (A**2) : 1.85000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 2.29000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.536 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.600 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 36.119 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.894 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.828 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6550 ; 0.007 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 5922 ; 0.003 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8921 ; 1.346 ; 1.644 REMARK 3 BOND ANGLES OTHERS (DEGREES): 13842 ; 1.322 ; 1.571 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 855 ; 6.639 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 241 ;30.345 ;22.780 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1030 ;11.843 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;12.411 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 882 ; 0.052 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7288 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1286 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3441 ; 3.554 ; 5.430 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3440 ; 3.553 ; 5.429 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4289 ; 6.042 ; 8.132 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 4290 ; 6.042 ; 8.133 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3109 ; 3.067 ; 5.549 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 3110 ; 3.066 ; 5.550 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 4633 ; 5.222 ; 8.196 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 6717 ; 8.808 ;62.691 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 6716 ; 8.809 ;62.677 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6NB5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-DEC-18. REMARK 100 THE DEPOSITION ID IS D_1000238379. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-JUN-18 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9774 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL, CYLINDRICALLY REMARK 200 BENT, SI(220) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.3 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17505 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 39.180 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 3.100 REMARK 200 R MERGE (I) : 0.29300 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 3.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 1.00200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.2 REMARK 200 STARTING MODEL: 6C5V REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30 % (V/V) JEFFAMINE ED-2001 PH 7.0 REMARK 280 AND 0.1 M HEPES PH 7.0, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 34.78750 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3530 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19390 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -21.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3590 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19900 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -21.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: I, M REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY H 104 REMARK 465 GLY H 105 REMARK 465 ASP H 106 REMARK 465 VAL H 107 REMARK 465 TRP H 108 REMARK 465 SER H 109 REMARK 465 SER H 110 REMARK 465 SER H 111 REMARK 465 TYR H 112 REMARK 465 CYS H 230 REMARK 465 GLN L 1 REMARK 465 SER L 2 REMARK 465 GLU L 213 REMARK 465 CYS L 214 REMARK 465 SER L 215 REMARK 465 GLU I 1 REMARK 465 TRP I 108 REMARK 465 SER I 109 REMARK 465 SER I 110 REMARK 465 SER I 111 REMARK 465 TYR I 112 REMARK 465 CYS I 230 REMARK 465 GLN M 1 REMARK 465 SER M 2 REMARK 465 GLN M 111 REMARK 465 GLU M 213 REMARK 465 CYS M 214 REMARK 465 SER M 215 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP H 75 104.32 -163.75 REMARK 500 ASN H 86 -74.17 -94.68 REMARK 500 ASP H 158 66.94 65.07 REMARK 500 LEU H 203 25.65 -140.95 REMARK 500 THR H 205 -18.74 80.68 REMARK 500 ASN H 218 42.81 39.18 REMARK 500 ASP L 28 -75.44 -122.04 REMARK 500 ASP L 53 -48.86 72.86 REMARK 500 ARG L 56 126.53 -173.38 REMARK 500 SER L 69 -167.33 -105.88 REMARK 500 ALA L 94 -149.61 -82.91 REMARK 500 GLN L 111 45.74 -143.92 REMARK 500 PRO L 112 -155.38 -84.50 REMARK 500 ASP L 154 -106.90 67.78 REMARK 500 ASN L 173 -21.16 75.11 REMARK 500 LYS L 174 -167.77 -73.83 REMARK 500 LYS I 67 125.96 -35.14 REMARK 500 SER I 175 -76.00 -78.38 REMARK 500 ASP M 28 -85.32 -124.00 REMARK 500 ASP M 33 60.18 -106.77 REMARK 500 ASP M 53 -53.93 73.44 REMARK 500 ALA M 133 118.64 -163.86 REMARK 500 ASP M 154 -119.28 52.56 REMARK 500 REMARK 500 REMARK: NULL DBREF 6NB5 H 1 230 PDB 6NB5 6NB5 1 230 DBREF 6NB5 L 1 215 PDB 6NB5 6NB5 1 215 DBREF 6NB5 I 1 230 PDB 6NB5 6NB5 1 230 DBREF 6NB5 M 1 215 PDB 6NB5 6NB5 1 215 SEQRES 1 H 230 GLU VAL GLN LEU LEU GLU SER GLY GLY GLY LEU VAL LYS SEQRES 2 H 230 PRO GLY GLY SER LEU ARG LEU SER CYS GLU ALA SER GLY SEQRES 3 H 230 LEU THR PHE SER ASN VAL TRP MET SER TRP VAL ARG GLN SEQRES 4 H 230 ALA PRO GLY LYS GLY LEU GLU TRP VAL GLY ARG ILE LYS SEQRES 5 H 230 ARG LYS SER GLU GLY ALA THR THR ASP TYR GLY ALA PRO SEQRES 6 H 230 VAL LYS GLY ARG PHE THR LEU SER ARG ASP ASP SER LYS SEQRES 7 H 230 ASN THR VAL TYR LEU GLN MET ASN SER LEU LYS ILE ASP SEQRES 8 H 230 ASP THR ALA VAL TYR TYR CYS SER THR LEU THR ARG GLY SEQRES 9 H 230 GLY ASP VAL TRP SER SER SER TYR TYR PHE ASP TYR TRP SEQRES 10 H 230 GLY GLN GLY ALA LEU VAL THR VAL SER SER ALA SER THR SEQRES 11 H 230 LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SER SER LYS SEQRES 12 H 230 SER THR SER GLY GLY THR ALA ALA LEU GLY CYS LEU VAL SEQRES 13 H 230 LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SER TRP ASN SEQRES 14 H 230 SER GLY ALA LEU THR SER GLY VAL HIS THR PHE PRO ALA SEQRES 15 H 230 VAL LEU GLN SER SER GLY LEU TYR SER LEU SER SER VAL SEQRES 16 H 230 VAL THR VAL PRO SER SER SER LEU GLY THR GLN THR TYR SEQRES 17 H 230 ILE CYS ASN VAL ASN HIS LYS PRO SER ASN THR LYS VAL SEQRES 18 H 230 ASP LYS ARG VAL GLU PRO LYS SER CYS SEQRES 1 L 215 GLN SER ALA LEU THR GLN PRO ALA SER VAL SER GLY SER SEQRES 2 L 215 PRO GLY GLN SER ILE THR ILE SER CYS THR GLY THR SER SEQRES 3 L 215 SER ASP VAL GLY THR TYR ASP LEU VAL SER TRP TYR GLN SEQRES 4 L 215 GLN HIS PRO GLY LYS SER PRO LYS LEU MET ILE TYR ALA SEQRES 5 L 215 ASP ILE LYS ARG PRO SER GLY VAL SER HIS ARG PHE SER SEQRES 6 L 215 GLY SER LYS SER GLY ASN THR ALA SER LEU THR ILE SER SEQRES 7 L 215 GLY LEU GLN SER ALA ASP GLU ALA ASP TYR TYR CYS CYS SEQRES 8 L 215 LEU TYR ALA GLY SER SER THR SER VAL ILE PHE GLY GLY SEQRES 9 L 215 GLY THR LYS VAL THR GLY GLN PRO LYS ALA ALA PRO SER SEQRES 10 L 215 VAL THR LEU PHE PRO PRO SER SER GLU GLU LEU GLN ALA SEQRES 11 L 215 ASN LYS ALA THR LEU VAL CYS LEU ILE SER ASP PHE TYR SEQRES 12 L 215 PRO GLY ALA VAL THR VAL ALA TRP LYS ALA ASP SER SER SEQRES 13 L 215 PRO VAL LYS ALA GLY VAL GLU THR THR THR PRO SER LYS SEQRES 14 L 215 GLN SER ASN ASN LYS TYR ALA ALA SER SER TYR LEU SER SEQRES 15 L 215 LEU THR PRO GLU GLN TRP LYS SER HIS ARG SER TYR SER SEQRES 16 L 215 CYS GLN VAL THR HIS GLU GLY SER THR VAL GLU LYS THR SEQRES 17 L 215 VAL ALA PRO THR GLU CYS SER SEQRES 1 I 230 GLU VAL GLN LEU LEU GLU SER GLY GLY GLY LEU VAL LYS SEQRES 2 I 230 PRO GLY GLY SER LEU ARG LEU SER CYS GLU ALA SER GLY SEQRES 3 I 230 LEU THR PHE SER ASN VAL TRP MET SER TRP VAL ARG GLN SEQRES 4 I 230 ALA PRO GLY LYS GLY LEU GLU TRP VAL GLY ARG ILE LYS SEQRES 5 I 230 ARG LYS SER GLU GLY ALA THR THR ASP TYR GLY ALA PRO SEQRES 6 I 230 VAL LYS GLY ARG PHE THR LEU SER ARG ASP ASP SER LYS SEQRES 7 I 230 ASN THR VAL TYR LEU GLN MET ASN SER LEU LYS ILE ASP SEQRES 8 I 230 ASP THR ALA VAL TYR TYR CYS SER THR LEU THR ARG GLY SEQRES 9 I 230 GLY ASP VAL TRP SER SER SER TYR TYR PHE ASP TYR TRP SEQRES 10 I 230 GLY GLN GLY ALA LEU VAL THR VAL SER SER ALA SER THR SEQRES 11 I 230 LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SER SER LYS SEQRES 12 I 230 SER THR SER GLY GLY THR ALA ALA LEU GLY CYS LEU VAL SEQRES 13 I 230 LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SER TRP ASN SEQRES 14 I 230 SER GLY ALA LEU THR SER GLY VAL HIS THR PHE PRO ALA SEQRES 15 I 230 VAL LEU GLN SER SER GLY LEU TYR SER LEU SER SER VAL SEQRES 16 I 230 VAL THR VAL PRO SER SER SER LEU GLY THR GLN THR TYR SEQRES 17 I 230 ILE CYS ASN VAL ASN HIS LYS PRO SER ASN THR LYS VAL SEQRES 18 I 230 ASP LYS ARG VAL GLU PRO LYS SER CYS SEQRES 1 M 215 GLN SER ALA LEU THR GLN PRO ALA SER VAL SER GLY SER SEQRES 2 M 215 PRO GLY GLN SER ILE THR ILE SER CYS THR GLY THR SER SEQRES 3 M 215 SER ASP VAL GLY THR TYR ASP LEU VAL SER TRP TYR GLN SEQRES 4 M 215 GLN HIS PRO GLY LYS SER PRO LYS LEU MET ILE TYR ALA SEQRES 5 M 215 ASP ILE LYS ARG PRO SER GLY VAL SER HIS ARG PHE SER SEQRES 6 M 215 GLY SER LYS SER GLY ASN THR ALA SER LEU THR ILE SER SEQRES 7 M 215 GLY LEU GLN SER ALA ASP GLU ALA ASP TYR TYR CYS CYS SEQRES 8 M 215 LEU TYR ALA GLY SER SER THR SER VAL ILE PHE GLY GLY SEQRES 9 M 215 GLY THR LYS VAL THR GLY GLN PRO LYS ALA ALA PRO SER SEQRES 10 M 215 VAL THR LEU PHE PRO PRO SER SER GLU GLU LEU GLN ALA SEQRES 11 M 215 ASN LYS ALA THR LEU VAL CYS LEU ILE SER ASP PHE TYR SEQRES 12 M 215 PRO GLY ALA VAL THR VAL ALA TRP LYS ALA ASP SER SER SEQRES 13 M 215 PRO VAL LYS ALA GLY VAL GLU THR THR THR PRO SER LYS SEQRES 14 M 215 GLN SER ASN ASN LYS TYR ALA ALA SER SER TYR LEU SER SEQRES 15 M 215 LEU THR PRO GLU GLN TRP LYS SER HIS ARG SER TYR SER SEQRES 16 M 215 CYS GLN VAL THR HIS GLU GLY SER THR VAL GLU LYS THR SEQRES 17 M 215 VAL ALA PRO THR GLU CYS SER HELIX 1 AA1 THR H 28 VAL H 32 5 5 HELIX 2 AA2 ARG H 53 GLY H 57 5 5 HELIX 3 AA3 LYS H 89 THR H 93 5 5 HELIX 4 AA4 SER H 170 ALA H 172 5 3 HELIX 5 AA5 LYS H 215 ASN H 218 5 4 HELIX 6 AA6 GLN L 81 GLU L 85 5 5 HELIX 7 AA7 SER L 124 ALA L 130 1 7 HELIX 8 AA8 THR L 184 HIS L 191 1 8 HELIX 9 AA9 ARG I 53 GLY I 57 5 5 HELIX 10 AB1 ASP I 76 LYS I 78 5 3 HELIX 11 AB2 LYS I 89 THR I 93 5 5 HELIX 12 AB3 SER I 170 ALA I 172 5 3 HELIX 13 AB4 PRO I 199 LEU I 203 5 5 HELIX 14 AB5 LYS I 215 ASN I 218 5 4 HELIX 15 AB6 GLN M 81 GLU M 85 5 5 HELIX 16 AB7 SER M 124 ALA M 130 1 7 HELIX 17 AB8 THR M 184 HIS M 191 1 8 SHEET 1 AA1 4 GLN H 3 SER H 7 0 SHEET 2 AA1 4 LEU H 18 SER H 25 -1 O SER H 25 N GLN H 3 SHEET 3 AA1 4 THR H 80 MET H 85 -1 O LEU H 83 N LEU H 20 SHEET 4 AA1 4 PHE H 70 ASP H 75 -1 N SER H 73 O TYR H 82 SHEET 1 AA2 6 GLY H 10 VAL H 12 0 SHEET 2 AA2 6 ALA H 121 VAL H 125 1 O THR H 124 N GLY H 10 SHEET 3 AA2 6 ALA H 94 LEU H 101 -1 N TYR H 96 O ALA H 121 SHEET 4 AA2 6 TRP H 33 GLN H 39 -1 N SER H 35 O SER H 99 SHEET 5 AA2 6 LEU H 45 ILE H 51 -1 O GLU H 46 N ARG H 38 SHEET 6 AA2 6 THR H 60 TYR H 62 -1 O ASP H 61 N ARG H 50 SHEET 1 AA3 4 SER H 134 SER H 141 0 SHEET 2 AA3 4 ALA H 150 TYR H 159 -1 O GLY H 153 N LEU H 138 SHEET 3 AA3 4 TYR H 190 VAL H 198 -1 O VAL H 196 N LEU H 152 SHEET 4 AA3 4 VAL H 177 THR H 179 -1 N HIS H 178 O VAL H 195 SHEET 1 AA4 4 SER H 134 SER H 141 0 SHEET 2 AA4 4 ALA H 150 TYR H 159 -1 O GLY H 153 N LEU H 138 SHEET 3 AA4 4 TYR H 190 VAL H 198 -1 O VAL H 196 N LEU H 152 SHEET 4 AA4 4 VAL H 183 LEU H 184 -1 N VAL H 183 O SER H 191 SHEET 1 AA5 3 THR H 165 TRP H 168 0 SHEET 2 AA5 3 ILE H 209 HIS H 214 -1 O ASN H 211 N SER H 167 SHEET 3 AA5 3 THR H 219 ARG H 224 -1 O VAL H 221 N VAL H 212 SHEET 1 AA6 3 ILE L 18 THR L 23 0 SHEET 2 AA6 3 THR L 72 ILE L 77 -1 O LEU L 75 N ILE L 20 SHEET 3 AA6 3 PHE L 64 LYS L 68 -1 N SER L 65 O THR L 76 SHEET 1 AA7 4 LYS L 47 ILE L 50 0 SHEET 2 AA7 4 SER L 36 GLN L 40 -1 N GLN L 39 O LYS L 47 SHEET 3 AA7 4 ASP L 87 LEU L 92 -1 O TYR L 89 N TYR L 38 SHEET 4 AA7 4 ILE L 101 PHE L 102 -1 O ILE L 101 N LEU L 92 SHEET 1 AA8 4 LYS L 47 ILE L 50 0 SHEET 2 AA8 4 SER L 36 GLN L 40 -1 N GLN L 39 O LYS L 47 SHEET 3 AA8 4 ASP L 87 LEU L 92 -1 O TYR L 89 N TYR L 38 SHEET 4 AA8 4 THR L 106 LYS L 107 -1 O THR L 106 N TYR L 88 SHEET 1 AA9 4 SER L 117 PHE L 121 0 SHEET 2 AA9 4 ALA L 133 PHE L 142 -1 O LEU L 138 N THR L 119 SHEET 3 AA9 4 TYR L 175 LEU L 183 -1 O ALA L 177 N ILE L 139 SHEET 4 AA9 4 VAL L 162 THR L 164 -1 N GLU L 163 O TYR L 180 SHEET 1 AB1 4 SER L 117 PHE L 121 0 SHEET 2 AB1 4 ALA L 133 PHE L 142 -1 O LEU L 138 N THR L 119 SHEET 3 AB1 4 TYR L 175 LEU L 183 -1 O ALA L 177 N ILE L 139 SHEET 4 AB1 4 SER L 168 LYS L 169 -1 N SER L 168 O ALA L 176 SHEET 1 AB2 4 SER L 156 VAL L 158 0 SHEET 2 AB2 4 THR L 148 ALA L 153 -1 N ALA L 153 O SER L 156 SHEET 3 AB2 4 TYR L 194 HIS L 200 -1 O GLN L 197 N ALA L 150 SHEET 4 AB2 4 SER L 203 VAL L 209 -1 O VAL L 205 N VAL L 198 SHEET 1 AB3 4 GLN I 3 SER I 7 0 SHEET 2 AB3 4 LEU I 18 SER I 25 -1 O SER I 21 N SER I 7 SHEET 3 AB3 4 THR I 80 MET I 85 -1 O LEU I 83 N LEU I 20 SHEET 4 AB3 4 PHE I 70 ASP I 75 -1 N SER I 73 O TYR I 82 SHEET 1 AB4 6 GLY I 10 VAL I 12 0 SHEET 2 AB4 6 ALA I 121 VAL I 125 1 O THR I 124 N VAL I 12 SHEET 3 AB4 6 ALA I 94 LEU I 101 -1 N TYR I 96 O ALA I 121 SHEET 4 AB4 6 MET I 34 GLN I 39 -1 N VAL I 37 O TYR I 97 SHEET 5 AB4 6 GLU I 46 ILE I 51 -1 O GLU I 46 N ARG I 38 SHEET 6 AB4 6 THR I 60 TYR I 62 -1 O ASP I 61 N ARG I 50 SHEET 1 AB5 4 GLY I 10 VAL I 12 0 SHEET 2 AB5 4 ALA I 121 VAL I 125 1 O THR I 124 N VAL I 12 SHEET 3 AB5 4 ALA I 94 LEU I 101 -1 N TYR I 96 O ALA I 121 SHEET 4 AB5 4 PHE I 114 TRP I 117 -1 O TYR I 116 N THR I 100 SHEET 1 AB6 4 SER I 134 SER I 141 0 SHEET 2 AB6 4 ALA I 150 TYR I 159 -1 O GLY I 153 N LEU I 138 SHEET 3 AB6 4 TYR I 190 VAL I 198 -1 O VAL I 196 N LEU I 152 SHEET 4 AB6 4 VAL I 177 THR I 179 -1 N HIS I 178 O VAL I 195 SHEET 1 AB7 4 SER I 134 SER I 141 0 SHEET 2 AB7 4 ALA I 150 TYR I 159 -1 O GLY I 153 N LEU I 138 SHEET 3 AB7 4 TYR I 190 VAL I 198 -1 O VAL I 196 N LEU I 152 SHEET 4 AB7 4 VAL I 183 LEU I 184 -1 N VAL I 183 O SER I 191 SHEET 1 AB8 3 THR I 165 TRP I 168 0 SHEET 2 AB8 3 ILE I 209 HIS I 214 -1 O ASN I 213 N THR I 165 SHEET 3 AB8 3 THR I 219 ARG I 224 -1 O VAL I 221 N VAL I 212 SHEET 1 AB9 5 SER M 9 SER M 11 0 SHEET 2 AB9 5 THR M 106 THR M 109 1 O LYS M 107 N VAL M 10 SHEET 3 AB9 5 ASP M 87 LEU M 92 -1 N TYR M 88 O THR M 106 SHEET 4 AB9 5 SER M 36 GLN M 40 -1 N GLN M 40 O ASP M 87 SHEET 5 AB9 5 LYS M 47 ILE M 50 -1 O MET M 49 N TRP M 37 SHEET 1 AC1 4 SER M 9 SER M 11 0 SHEET 2 AC1 4 THR M 106 THR M 109 1 O LYS M 107 N VAL M 10 SHEET 3 AC1 4 ASP M 87 LEU M 92 -1 N TYR M 88 O THR M 106 SHEET 4 AC1 4 ILE M 101 PHE M 102 -1 O ILE M 101 N LEU M 92 SHEET 1 AC2 3 ILE M 18 THR M 23 0 SHEET 2 AC2 3 THR M 72 ILE M 77 -1 O LEU M 75 N ILE M 20 SHEET 3 AC2 3 PHE M 64 SER M 69 -1 N SER M 65 O THR M 76 SHEET 1 AC3 4 SER M 117 PHE M 121 0 SHEET 2 AC3 4 ALA M 133 PHE M 142 -1 O LEU M 138 N THR M 119 SHEET 3 AC3 4 TYR M 175 LEU M 183 -1 O ALA M 177 N ILE M 139 SHEET 4 AC3 4 VAL M 162 THR M 164 -1 N GLU M 163 O TYR M 180 SHEET 1 AC4 4 SER M 117 PHE M 121 0 SHEET 2 AC4 4 ALA M 133 PHE M 142 -1 O LEU M 138 N THR M 119 SHEET 3 AC4 4 TYR M 175 LEU M 183 -1 O ALA M 177 N ILE M 139 SHEET 4 AC4 4 SER M 168 LYS M 169 -1 N SER M 168 O ALA M 176 SHEET 1 AC5 4 SER M 156 PRO M 157 0 SHEET 2 AC5 4 THR M 148 ALA M 153 -1 N ALA M 153 O SER M 156 SHEET 3 AC5 4 TYR M 194 HIS M 200 -1 O THR M 199 N THR M 148 SHEET 4 AC5 4 SER M 203 VAL M 209 -1 O VAL M 205 N VAL M 198 SSBOND 1 CYS H 22 CYS H 98 1555 1555 2.06 SSBOND 2 CYS H 154 CYS H 210 1555 1555 2.05 SSBOND 3 CYS L 22 CYS L 90 1555 1555 2.04 SSBOND 4 CYS L 137 CYS L 196 1555 1555 2.01 SSBOND 5 CYS I 22 CYS I 98 1555 1555 2.02 SSBOND 6 CYS I 154 CYS I 210 1555 1555 2.01 SSBOND 7 CYS M 22 CYS M 90 1555 1555 2.05 SSBOND 8 CYS M 137 CYS M 196 1555 1555 2.01 CISPEP 1 PHE H 160 PRO H 161 0 -10.56 CISPEP 2 GLU H 162 PRO H 163 0 -12.20 CISPEP 3 TYR L 143 PRO L 144 0 1.40 CISPEP 4 PHE I 160 PRO I 161 0 -4.14 CISPEP 5 GLU I 162 PRO I 163 0 -10.37 CISPEP 6 TYR M 143 PRO M 144 0 -3.24 CRYST1 70.725 69.575 93.838 90.00 107.65 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014139 0.000000 0.004499 0.00000 SCALE2 0.000000 0.014373 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011183 0.00000