HEADER CELL CYCLE 17-DEC-18 6NE6 TITLE CRYSTAL STRUCTURE OF HETEROTRIMERIC G-PROTEIN ALPHA SUBUNIT GALPHA7 TITLE 2 FROM NAEGLERIA FOWLERI COMPND MOL_ID: 1; COMPND 2 MOLECULE: G-PROTEIN ALPHA SUBUNIT GALPHA7; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NAEGLERIA FOWLERI; SOURCE 3 ORGANISM_TAXID: 5763; SOURCE 4 GENE: NF0037180; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS SSGCID, GUANINE NUCLEOTIDE BINDING, G PROTEIN, STRUCTURAL GENOMICS, KEYWDS 2 SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE, CELL KEYWDS 3 CYCLE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 2 11-OCT-23 6NE6 1 LINK REVDAT 1 18-DEC-19 6NE6 0 JRNL AUTH D.M.DRANOW,J.ABENDROTH,D.D.LORIMER,P.S.HORANYI,T.E.EDWARDS JRNL TITL CRYSTAL STRUCTURE OF HETEROTRIMERIC G-PROTEIN ALPHA SUBUNIT JRNL TITL 2 GALPHA7 FROM NAEGLERIA FOWLERI JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.26 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 3 NUMBER OF REFLECTIONS : 35817 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.163 REMARK 3 R VALUE (WORKING SET) : 0.161 REMARK 3 FREE R VALUE : 0.195 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.990 REMARK 3 FREE R VALUE TEST SET COUNT : 2146 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.2751 - 4.1916 0.99 2466 155 0.1686 0.2003 REMARK 3 2 4.1916 - 3.3272 0.99 2367 145 0.1451 0.1612 REMARK 3 3 3.3272 - 2.9067 0.99 2341 149 0.1587 0.2012 REMARK 3 4 2.9067 - 2.6410 0.99 2302 153 0.1552 0.2121 REMARK 3 5 2.6410 - 2.4517 0.99 2307 153 0.1586 0.1897 REMARK 3 6 2.4517 - 2.3071 0.98 2286 145 0.1525 0.1840 REMARK 3 7 2.3071 - 2.1916 0.98 2262 146 0.1570 0.1732 REMARK 3 8 2.1916 - 2.0962 0.98 2268 129 0.1571 0.2107 REMARK 3 9 2.0962 - 2.0155 0.97 2217 147 0.1602 0.1949 REMARK 3 10 2.0155 - 1.9459 0.97 2209 162 0.1598 0.1893 REMARK 3 11 1.9459 - 1.8851 0.97 2218 149 0.1607 0.2099 REMARK 3 12 1.8851 - 1.8312 0.95 2155 152 0.1743 0.2065 REMARK 3 13 1.8312 - 1.7830 0.94 2133 138 0.1887 0.2418 REMARK 3 14 1.7830 - 1.7395 0.91 2107 127 0.2084 0.2782 REMARK 3 15 1.7395 - 1.6999 0.88 2033 96 0.2250 0.2485 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.730 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.19 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 27 THROUGH 62 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.1387 38.3353 -3.8120 REMARK 3 T TENSOR REMARK 3 T11: 0.1151 T22: 0.1300 REMARK 3 T33: 0.1214 T12: -0.0113 REMARK 3 T13: 0.0012 T23: 0.0204 REMARK 3 L TENSOR REMARK 3 L11: 1.1439 L22: 1.6130 REMARK 3 L33: 1.4431 L12: -0.7207 REMARK 3 L13: -0.2270 L23: 0.3626 REMARK 3 S TENSOR REMARK 3 S11: -0.0363 S12: 0.2402 S13: -0.0247 REMARK 3 S21: -0.0647 S22: 0.0104 S23: 0.1065 REMARK 3 S31: 0.0518 S32: -0.0269 S33: 0.0240 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 63 THROUGH 90 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.5758 39.3262 8.4888 REMARK 3 T TENSOR REMARK 3 T11: 0.1345 T22: 0.1475 REMARK 3 T33: 0.1478 T12: 0.0233 REMARK 3 T13: 0.0200 T23: 0.0296 REMARK 3 L TENSOR REMARK 3 L11: 1.9366 L22: 4.6964 REMARK 3 L33: 7.1347 L12: 3.0125 REMARK 3 L13: 3.7112 L23: 5.7962 REMARK 3 S TENSOR REMARK 3 S11: -0.0928 S12: 0.0806 S13: 0.1061 REMARK 3 S21: -0.1280 S22: 0.0119 S23: 0.0276 REMARK 3 S31: -0.2410 S32: 0.1584 S33: 0.0680 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 91 THROUGH 116 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.0654 41.9281 17.5709 REMARK 3 T TENSOR REMARK 3 T11: 0.1523 T22: 0.2123 REMARK 3 T33: 0.2360 T12: -0.0142 REMARK 3 T13: 0.0020 T23: 0.0290 REMARK 3 L TENSOR REMARK 3 L11: 1.1835 L22: 1.4549 REMARK 3 L33: 3.0056 L12: -0.3876 REMARK 3 L13: 1.2035 L23: -1.2011 REMARK 3 S TENSOR REMARK 3 S11: -0.0156 S12: 0.1055 S13: 0.1232 REMARK 3 S21: 0.0154 S22: -0.2771 S23: -0.3101 REMARK 3 S31: 0.0403 S32: 0.4737 S33: 0.1715 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 117 THROUGH 165 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.3063 36.0468 15.7465 REMARK 3 T TENSOR REMARK 3 T11: 0.1178 T22: 0.1311 REMARK 3 T33: 0.1290 T12: 0.0072 REMARK 3 T13: -0.0069 T23: 0.0268 REMARK 3 L TENSOR REMARK 3 L11: 1.2315 L22: 1.6254 REMARK 3 L33: 1.6662 L12: -0.0761 REMARK 3 L13: 0.5177 L23: -0.0863 REMARK 3 S TENSOR REMARK 3 S11: 0.0138 S12: -0.0206 S13: -0.0725 REMARK 3 S21: 0.0263 S22: -0.0300 S23: -0.0140 REMARK 3 S31: 0.1044 S32: 0.1244 S33: -0.0078 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 166 THROUGH 203 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.5856 35.3267 -0.7778 REMARK 3 T TENSOR REMARK 3 T11: 0.1623 T22: 0.1525 REMARK 3 T33: 0.1467 T12: -0.0104 REMARK 3 T13: 0.0129 T23: 0.0060 REMARK 3 L TENSOR REMARK 3 L11: 3.5932 L22: 0.5320 REMARK 3 L33: 1.7489 L12: -0.2406 REMARK 3 L13: 1.8826 L23: -0.0986 REMARK 3 S TENSOR REMARK 3 S11: 0.0242 S12: 0.1226 S13: -0.0884 REMARK 3 S21: -0.0171 S22: -0.0242 S23: 0.0549 REMARK 3 S31: 0.0625 S32: 0.0341 S33: 0.0189 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 204 THROUGH 244 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.1116 49.1480 2.3020 REMARK 3 T TENSOR REMARK 3 T11: 0.2232 T22: 0.2463 REMARK 3 T33: 0.2063 T12: -0.0195 REMARK 3 T13: 0.0077 T23: 0.0356 REMARK 3 L TENSOR REMARK 3 L11: 1.9421 L22: 1.1267 REMARK 3 L33: 1.6095 L12: 0.4808 REMARK 3 L13: 1.0126 L23: 1.2422 REMARK 3 S TENSOR REMARK 3 S11: -0.1630 S12: 0.4870 S13: -0.0515 REMARK 3 S21: -0.2567 S22: 0.1103 S23: -0.0122 REMARK 3 S31: -0.3001 S32: 0.4015 S33: 0.0427 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 245 THROUGH 331 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.6351 48.9587 16.6186 REMARK 3 T TENSOR REMARK 3 T11: 0.1019 T22: 0.0993 REMARK 3 T33: 0.1272 T12: 0.0158 REMARK 3 T13: 0.0272 T23: 0.0005 REMARK 3 L TENSOR REMARK 3 L11: 1.1857 L22: 1.8375 REMARK 3 L33: 2.3790 L12: -0.1389 REMARK 3 L13: 0.8786 L23: -0.6749 REMARK 3 S TENSOR REMARK 3 S11: -0.0237 S12: -0.0751 S13: 0.0287 REMARK 3 S21: 0.1402 S22: 0.0051 S23: 0.1209 REMARK 3 S31: -0.1359 S32: -0.1252 S33: 0.0207 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 332 THROUGH 353 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.9950 38.2488 3.6828 REMARK 3 T TENSOR REMARK 3 T11: 0.1428 T22: 0.1442 REMARK 3 T33: 0.2368 T12: -0.0357 REMARK 3 T13: 0.0394 T23: 0.0197 REMARK 3 L TENSOR REMARK 3 L11: 9.4354 L22: 8.8982 REMARK 3 L33: 4.5818 L12: -8.5888 REMARK 3 L13: 5.5664 L23: -4.6575 REMARK 3 S TENSOR REMARK 3 S11: 0.1197 S12: -0.1321 S13: 0.0497 REMARK 3 S21: -0.0220 S22: -0.0311 S23: 0.1881 REMARK 3 S31: 0.1003 S32: -0.2289 S33: -0.1104 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6NE6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-DEC-18. REMARK 100 THE DEPOSITION ID IS D_1000238647. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-APR-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : DIAMOND [111] REMARK 200 OPTICS : BERYLLIUM LENSES REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37029 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 48.256 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.003 REMARK 200 R MERGE (I) : 0.04600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.0900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 5.00 REMARK 200 R MERGE FOR SHELL (I) : 0.51200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.990 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MORDA REMARK 200 STARTING MODEL: 5DO9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NAFOA.01088.E.B1 AND NAFOA.19531.B.B2 REMARK 280 WERE CO-PURIFIED (PW38434) TO 20.24 MG/ML IN A BUFFER CONTAINING REMARK 280 25 MM HEPES PH 7.5, 500 MM NACL, 5% GLYCEROL , 2 MM DTT, 0.025% REMARK 280 AZIDE, 10MM MGCL2, 10MM NAF, 30UM ALCL3, 5UM GDP, WAS MIXED 1:1 REMARK 280 WITH WIZ3/4(C8): 16% (W/V) PEG-800, 40 MM POTASSIUM PHOSPHATE REMARK 280 MONOBASIC, 20% (V/V) GLYCEROL, CRYOPROTECTED WITH 20% ETHYLENE REMARK 280 GLYCOL. TRAY 299259C8, PUCK: RHN8-4, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 30.34500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 39.78500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.15500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 39.78500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.34500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.15500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1570 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16880 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 25 REMARK 465 ALA A 26 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 27 CG ND1 CD2 CE1 NE2 REMARK 470 GLN A 112 CG CD OE1 NE2 REMARK 470 LYS A 120 CG CD CE NZ REMARK 470 GLN A 207 CG CD OE1 NE2 REMARK 470 ARG A 208 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 210 CG CD OE1 OE2 REMARK 470 LYS A 212 CG CD CE NZ REMARK 470 LYS A 213 CG CD CE NZ REMARK 470 GLU A 293 CG CD OE1 OE2 REMARK 470 GLU A 318 CG CD OE1 OE2 REMARK 470 GLU A 340 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 217 53.16 39.52 REMARK 500 ALA A 263 -116.64 47.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 401 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 716 O REMARK 620 2 HOH A 730 O 82.0 REMARK 620 3 HOH A 743 O 172.5 91.6 REMARK 620 4 HOH A 782 O 81.0 68.3 93.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 402 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 541 O REMARK 620 2 HOH A 560 O 88.2 REMARK 620 3 HOH A 695 O 178.5 90.3 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 409 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: SSGCID-NAFOA.01088.E RELATED DB: TARGETTRACK DBREF 6NE6 A 25 353 PDB 6NE6 6NE6 25 353 SEQRES 1 A 329 MET ALA HIS HIS HIS HIS HIS HIS MET LYS LYS ILE LEU SEQRES 2 A 329 LEU VAL GLY ALA GLY ASP SER GLY LYS SER THR ILE PHE SEQRES 3 A 329 LYS GLN MET ARG LEU ILE TYR ASN ASN GLY PHE THR THR SEQRES 4 A 329 GLU GLU LYS THR LYS ILE LYS PRO MET ILE TYR GLU ASN SEQRES 5 A 329 ILE LEU ARG ASN MET MET VAL LEU ILE GLN ALA THR LYS SEQRES 6 A 329 SER LEU ASN LEU PRO ILE SER THR GLU GLU ASN ARG GLN SEQRES 7 A 329 ARG ALA GLU LYS ILE GLU GLY LEU GLU GLN LYS ILE LEU SEQRES 8 A 329 LEU THR THR ASP LYS VAL TRP ASP SER ASN LEU ALA GLN SEQRES 9 A 329 ASP ILE ALA GLU LEU TRP LYS GLU PRO ALA ILE LEU GLN SEQRES 10 A 329 ALA MET ALA ARG ARG ASN GLU PHE GLN ILE GLU ASP SER SEQRES 11 A 329 ALA SER TYR TYR PHE ASP ASN LEU ASP ARG ILE GLY LYS SEQRES 12 A 329 ASP ASP TYR MET PRO SER GLU GLU ASP VAL VAL ARG ALA SEQRES 13 A 329 ARG ILE LYS THR THR GLY LEU ILE GLU GLN PRO PHE THR SEQRES 14 A 329 PHE LYS ASN LEU PRO PHE CYS MET ILE ASP VAL GLY GLY SEQRES 15 A 329 GLN ARG THR GLU ARG LYS LYS TRP ILE HIS HIS PHE GLN SEQRES 16 A 329 GLY VAL ASP SER ILE LEU PHE VAL CYS SER LEU SER GLU SEQRES 17 A 329 PHE ASP GLN LYS CYS TYR GLU ASP ASP SER THR ASN ARG SEQRES 18 A 329 MET LYS GLU SER LEU SER LEU PHE GLY ASP TYR ILE ASN SEQRES 19 A 329 SER LYS TRP PHE ALA ASP THR LEU VAL TYR LEU LEU LEU SEQRES 20 A 329 ASN LYS HIS ASP LEU PHE VAL SER LYS ILE LYS ASN GLY SEQRES 21 A 329 SER ARG LEU ALA ASP THR PHE GLU GLU TYR LYS GLY PRO SEQRES 22 A 329 GLU ASN ASP PRO ASP ALA ALA LYS GLU PHE ILE LYS ASP SEQRES 23 A 329 MET TYR LYS GLU LYS ASP THR GLU ASN ARG LEU ARG ASP SEQRES 24 A 329 VAL PHE PHE VAL THR ALA LEU ASP LYS ALA ASN LEU LYS SEQRES 25 A 329 GLU ARG LEU GLU GLN ILE THR SER ASP ILE LEU SER ALA SEQRES 26 A 329 GLU ASN ASP LEU HET NA A 401 1 HET NA A 402 1 HET EDO A 403 4 HET EDO A 404 4 HET EDO A 405 4 HET EDO A 406 4 HET EDO A 407 4 HET EDO A 408 4 HET EDO A 409 4 HETNAM NA SODIUM ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 NA 2(NA 1+) FORMUL 4 EDO 7(C2 H6 O2) FORMUL 11 HOH *326(H2 O) HELIX 1 AA1 GLY A 45 TYR A 57 1 13 HELIX 2 AA2 THR A 62 LEU A 91 1 30 HELIX 3 AA3 THR A 97 ILE A 114 1 18 HELIX 4 AA4 LEU A 115 THR A 117 5 3 HELIX 5 AA5 ASP A 123 TRP A 134 1 12 HELIX 6 AA6 GLU A 136 ARG A 145 1 10 HELIX 7 AA7 ARG A 146 PHE A 149 5 4 HELIX 8 AA8 SER A 154 ASN A 161 1 8 HELIX 9 AA9 ASN A 161 GLY A 166 1 6 HELIX 10 AB1 SER A 173 ARG A 179 1 7 HELIX 11 AB2 GLU A 210 PHE A 218 5 9 HELIX 12 AB3 SER A 231 GLN A 235 5 5 HELIX 13 AB4 ASN A 244 LYS A 260 1 17 HELIX 14 AB5 LYS A 273 ASN A 283 1 11 HELIX 15 AB6 ARG A 286 THR A 290 5 5 HELIX 16 AB7 ASP A 300 ASP A 316 1 17 HELIX 17 AB8 ASP A 331 ASN A 351 1 21 SHEET 1 AA1 6 ILE A 188 PHE A 194 0 SHEET 2 AA1 6 LEU A 197 ASP A 203 -1 O PHE A 199 N PHE A 192 SHEET 3 AA1 6 LYS A 34 GLY A 40 1 N ILE A 36 O CYS A 200 SHEET 4 AA1 6 SER A 223 SER A 229 1 O VAL A 227 N VAL A 39 SHEET 5 AA1 6 LEU A 266 ASN A 272 1 O TYR A 268 N PHE A 226 SHEET 6 AA1 6 LEU A 321 PHE A 326 1 O ARG A 322 N VAL A 267 LINK NA NA A 401 O HOH A 716 1555 2564 2.28 LINK NA NA A 401 O HOH A 730 1555 1555 2.35 LINK NA NA A 401 O HOH A 743 1555 1555 2.30 LINK NA NA A 401 O HOH A 782 1555 1555 2.47 LINK NA NA A 402 O HOH A 541 1555 2564 2.19 LINK NA NA A 402 O HOH A 560 1555 2564 2.17 LINK NA NA A 402 O HOH A 695 1555 1555 2.17 SITE 1 AC1 6 HIS A 29 HIS A 31 HOH A 716 HOH A 730 SITE 2 AC1 6 HOH A 743 HOH A 782 SITE 1 AC2 6 HIS A 28 HIS A 30 HIS A 217 HOH A 541 SITE 2 AC2 6 HOH A 560 HOH A 695 SITE 1 AC3 6 ASP A 43 GLN A 150 ILE A 151 GLU A 152 SITE 2 AC3 6 ARG A 245 HOH A 519 SITE 1 AC4 4 ILE A 95 SER A 96 THR A 97 GLU A 98 SITE 1 AC5 6 GLU A 75 ASP A 119 LYS A 120 VAL A 121 SITE 2 AC5 6 TRP A 122 HOH A 504 SITE 1 AC6 8 ALA A 127 GLN A 128 LEU A 162 ASP A 163 SITE 2 AC6 8 GLY A 166 HOH A 631 HOH A 694 HOH A 720 SITE 1 AC7 5 HIS A 29 HIS A 30 ASP A 241 SER A 242 SITE 2 AC7 5 HOH A 695 SITE 1 AC8 5 ASN A 58 ASN A 59 GLY A 60 GLN A 141 SITE 2 AC8 5 HOH A 517 SITE 1 AC9 5 LYS A 89 ARG A 101 ALA A 104 GLU A 105 SITE 2 AC9 5 GLU A 108 CRYST1 60.690 68.310 79.570 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016477 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014639 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012568 0.00000