HEADER DNA BINDING PROTEIN, PROTEIN FIBRIL 18-DEC-18 6NEO TITLE CRYSTAL STRUCTURE OF PPRA FILAMENT FROM DEINOCOCCUS RADIODURANS COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA REPAIR PROTEIN PPRA; COMPND 3 CHAIN: B; COMPND 4 SYNONYM: PLEIOTROPIC PROTEIN PROMOTING DNA REPAIR; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DEINOCOCCUS RADIODURANS (STRAIN ATCC 13939 / SOURCE 3 DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / SOURCE 4 VKM B-1422); SOURCE 5 ORGANISM_TAXID: 243230; SOURCE 6 STRAIN: ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / SOURCE 7 NCIMB 9279 / R1 / VKM B-1422; SOURCE 8 GENE: PPRA, DR_A0346; SOURCE 9 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 11 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 12 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 13 EXPRESSION_SYSTEM_PLASMID: PDEST-527 KEYWDS DNA DAMAGE REPAIR, RADIATION INDUCED, GENOME SEGREGATION, FILAMENT KEYWDS 2 FORMATION, DNA BINDING PROTEIN, PROTEIN FIBRIL EXPDTA X-RAY DIFFRACTION AUTHOR R.SZABLA,M.S.JUNOP,M.ROK REVDAT 3 11-OCT-23 6NEO 1 REMARK REVDAT 2 08-JAN-20 6NEO 1 REMARK REVDAT 1 20-FEB-19 6NEO 0 JRNL AUTH R.SZABLA,M.S.JUNOP,M.ROK JRNL TITL CRYSTAL STRUCTURE OF PPRA FILAMENT FROM DEINOCOCCUS JRNL TITL 2 RADIODURANS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 5.94 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 5.94 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.03 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 1502 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.288 REMARK 3 R VALUE (WORKING SET) : 0.287 REMARK 3 FREE R VALUE : 0.309 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.930 REMARK 3 FREE R VALUE TEST SET COUNT : 74 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 0.0000 - 5.9395 0.00 0 0 0.0000 0.0000 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.410 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.030 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.001 1489 REMARK 3 ANGLE : 0.357 2056 REMARK 3 CHIRALITY : 0.036 248 REMARK 3 PLANARITY : 0.002 294 REMARK 3 DIHEDRAL : 7.704 864 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6NEO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-DEC-18. REMARK 100 THE DEPOSITION ID IS D_1000238659. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-JUN-18 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944+ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.32 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 1513 REMARK 200 RESOLUTION RANGE HIGH (A) : 5.940 REMARK 200 RESOLUTION RANGE LOW (A) : 67.530 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 13.90 REMARK 200 R MERGE (I) : 0.26100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 5.94 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 6.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.8 REMARK 200 DATA REDUNDANCY IN SHELL : 13.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 1.13_2998 REMARK 200 STARTING MODEL: PDB ENTRY 6MC8 CHAIN B REMARK 200 REMARK 200 REMARK: LONG HEXAGONAL-BASE PRISM REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 72.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.55 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1:1 4.9 MG/ML PROTEIN IN 150 MM REMARK 280 POTASSIUM CHLORIDE, 20 MM TRIS, PH 8.0 + MORPHEUS II-FX96 REMARK 280 (MOLECULAR DIMENSIONS) CONDITION H2 - 40 MM POLYAMINES (SPERMINE REMARK 280 TETRAHYDROCHLORIDE, SPERMIDINE TRIHYDROCHLORIDE, 1,4- REMARK 280 DIAMINOBUTANE DIHYDROCHLORIDE, DL-ORNITHINE MONOHYDROCHLORIDE), REMARK 280 50% V/V PRECIPITANT MIX 6 (25% W/V PEG4000, 40% W/V 1,2,6- REMARK 280 HEXANETRIOL), 0.1 M BUFFER SYSTEM 4 (GLY-GLY, AMPD) AT PH 6.5. REMARK 280 THE DROP WAS SUSPENDED OVER A 1.5 M AMMONIUM SULFATE DEHYDRATING REMARK 280 SOLUTION AND INCUBATED AT 20 DEGREES C FOR ABOUT 5 MONTHS., REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+1/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 26.41667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 52.83333 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 26.41667 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 52.83333 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 26.41667 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 52.83333 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 26.41667 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 52.83333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DODECAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 -79.25000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 -158.50000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 4 -1.000000 0.000000 0.000000 74.48950 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 129.01960 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 5 -1.000000 0.000000 0.000000 74.48950 REMARK 350 BIOMT2 5 0.000000 -1.000000 0.000000 129.01960 REMARK 350 BIOMT3 5 0.000000 0.000000 1.000000 -79.25000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 6 -1.000000 0.000000 0.000000 74.48950 REMARK 350 BIOMT2 6 0.000000 -1.000000 0.000000 129.01960 REMARK 350 BIOMT3 6 0.000000 0.000000 1.000000 -158.50000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 7 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 7 0.000000 0.000000 -1.000000 -52.83333 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 8 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 8 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 8 0.000000 0.000000 -1.000000 -132.08333 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 9 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 9 0.000000 0.000000 -1.000000 -211.33333 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 10 0.500000 -0.866025 0.000000 74.48950 REMARK 350 BIOMT2 10 -0.866025 -0.500000 0.000000 129.01960 REMARK 350 BIOMT3 10 0.000000 0.000000 -1.000000 -52.83333 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 11 0.500000 -0.866025 0.000000 74.48950 REMARK 350 BIOMT2 11 -0.866025 -0.500000 0.000000 129.01960 REMARK 350 BIOMT3 11 0.000000 0.000000 -1.000000 -132.08333 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 12 0.500000 -0.866025 0.000000 74.48950 REMARK 350 BIOMT2 12 -0.866025 -0.500000 0.000000 129.01960 REMARK 350 BIOMT3 12 0.000000 0.000000 -1.000000 -211.33333 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY B 7 REMARK 465 MET B 8 REMARK 465 GLN B 9 REMARK 465 THR B 10 REMARK 465 ASP B 11 REMARK 465 GLY B 12 REMARK 465 ILE B 13 REMARK 465 ALA B 214 REMARK 465 ARG B 215 REMARK 465 HIS B 216 REMARK 465 ALA B 217 REMARK 465 GLY B 218 REMARK 465 ALA B 219 REMARK 465 LYS B 220 REMARK 465 ALA B 221 REMARK 465 GLY B 280 REMARK 465 LEU B 281 REMARK 465 ARG B 282 REMARK 465 GLU B 283 REMARK 465 SER B 284 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 TYR B 14 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 PHE B 17 CG CD1 CD2 CE1 CE2 CZ REMARK 470 THR B 19 OG1 CG2 REMARK 470 LEU B 20 CG CD1 CD2 REMARK 470 MET B 21 CG SD CE REMARK 470 SER B 22 OG REMARK 470 VAL B 26 CG1 CG2 REMARK 470 ILE B 30 CG1 CG2 CD1 REMARK 470 LEU B 33 CG CD1 CD2 REMARK 470 GLU B 37 CG CD OE1 OE2 REMARK 470 LEU B 43 CG CD1 CD2 REMARK 470 LEU B 47 CG CD1 CD2 REMARK 470 GLN B 49 CG CD OE1 NE2 REMARK 470 LEU B 51 CG CD1 CD2 REMARK 470 GLN B 52 CG CD OE1 NE2 REMARK 470 GLU B 53 CG CD OE1 OE2 REMARK 470 GLN B 55 CG CD OE1 NE2 REMARK 470 ARG B 57 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 60 CG CD1 CD2 REMARK 470 LEU B 62 CG CD1 CD2 REMARK 470 HIS B 63 CG ND1 CD2 CE1 NE2 REMARK 470 LEU B 65 CG CD1 CD2 REMARK 470 ARG B 66 CG CD NE CZ NH1 NH2 REMARK 470 HIS B 67 CG ND1 CD2 CE1 NE2 REMARK 470 GLU B 68 CG CD OE1 OE2 REMARK 470 ARG B 70 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 71 CG CD1 CD2 REMARK 470 ILE B 77 CG1 CG2 CD1 REMARK 470 GLU B 78 CG CD OE1 OE2 REMARK 470 ILE B 79 CG1 CG2 CD1 REMARK 470 THR B 81 OG1 CG2 REMARK 470 ASP B 82 CG OD1 OD2 REMARK 470 ARG B 84 CG CD NE CZ NH1 NH2 REMARK 470 SER B 86 OG REMARK 470 ARG B 88 CG CD NE CZ NH1 NH2 REMARK 470 VAL B 89 CG1 CG2 REMARK 470 GLU B 91 CG CD OE1 OE2 REMARK 470 PHE B 93 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LEU B 96 CG CD1 CD2 REMARK 470 GLN B 98 CG CD OE1 NE2 REMARK 470 TYR B 100 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 MET B 103 CG SD CE REMARK 470 GLN B 104 CG CD OE1 NE2 REMARK 470 LEU B 106 CG CD1 CD2 REMARK 470 GLU B 108 CG CD OE1 OE2 REMARK 470 ARG B 109 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 111 CG CD1 CD2 REMARK 470 LEU B 117 CG CD1 CD2 REMARK 470 GLU B 119 CG CD OE1 OE2 REMARK 470 ARG B 122 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 127 CG CD1 CD2 REMARK 470 LEU B 129 CG CD1 CD2 REMARK 470 GLN B 131 CG CD OE1 NE2 REMARK 470 LEU B 132 CG CD1 CD2 REMARK 470 LYS B 133 CG CD CE NZ REMARK 470 VAL B 134 CG1 CG2 REMARK 470 LEU B 135 CG CD1 CD2 REMARK 470 ILE B 136 CG1 CG2 CD1 REMARK 470 ARG B 140 CG CD NE CZ NH1 NH2 REMARK 470 PHE B 142 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU B 143 CG CD OE1 OE2 REMARK 470 ARG B 150 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 152 CG CD OE1 OE2 REMARK 470 PHE B 154 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLN B 155 CG CD OE1 NE2 REMARK 470 ARG B 156 CG CD NE CZ NH1 NH2 REMARK 470 VAL B 157 CG1 CG2 REMARK 470 LYS B 160 CG CD CE NZ REMARK 470 ASP B 162 CG OD1 OD2 REMARK 470 LEU B 164 CG CD1 CD2 REMARK 470 PHE B 165 CG CD1 CD2 CE1 CE2 CZ REMARK 470 VAL B 166 CG1 CG2 REMARK 470 GLU B 167 CG CD OE1 OE2 REMARK 470 VAL B 168 CG1 CG2 REMARK 470 ARG B 170 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 175 CG CD OE1 OE2 REMARK 470 LEU B 178 CG CD1 CD2 REMARK 470 LYS B 180 CG CD CE NZ REMARK 470 TRP B 183 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP B 183 CZ3 CH2 REMARK 470 LYS B 184 CG CD CE NZ REMARK 470 VAL B 185 CG1 CG2 REMARK 470 ILE B 186 CG1 CG2 CD1 REMARK 470 ILE B 189 CG1 CG2 CD1 REMARK 470 ARG B 192 CG CD NE CZ NH1 NH2 REMARK 470 PHE B 194 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU B 197 CG CD OE1 OE2 REMARK 470 LEU B 198 CG CD1 CD2 REMARK 470 MET B 199 CG SD CE REMARK 470 ARG B 200 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 201 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 205 CG OD1 OD2 REMARK 470 MET B 207 CG SD CE REMARK 470 LEU B 208 CG CD1 CD2 REMARK 470 LEU B 211 CG CD1 CD2 REMARK 470 LEU B 212 CG CD1 CD2 REMARK 470 LEU B 223 CG CD1 CD2 REMARK 470 GLN B 225 CG CD OE1 NE2 REMARK 470 LEU B 226 CG CD1 CD2 REMARK 470 GLU B 228 CG CD OE1 OE2 REMARK 470 HIS B 230 CG ND1 CD2 CE1 NE2 REMARK 470 PHE B 231 CG CD1 CD2 CE1 CE2 CZ REMARK 470 THR B 232 OG1 CG2 REMARK 470 VAL B 233 CG1 CG2 REMARK 470 GLN B 234 CG CD OE1 NE2 REMARK 470 PHE B 236 CG CD1 CD2 CE1 CE2 CZ REMARK 470 VAL B 237 CG1 CG2 REMARK 470 GLN B 238 CG CD OE1 NE2 REMARK 470 LEU B 240 CG CD1 CD2 REMARK 470 GLU B 249 CG CD OE1 OE2 REMARK 470 TYR B 251 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ARG B 252 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 255 CG CD1 CD2 REMARK 470 LYS B 256 CG CD CE NZ REMARK 470 THR B 257 OG1 CG2 REMARK 470 LEU B 262 CG CD1 CD2 REMARK 470 GLU B 263 CD OE1 OE2 REMARK 470 GLU B 264 CG CD OE1 OE2 REMARK 470 TYR B 265 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLN B 266 CG CD OE1 NE2 REMARK 470 VAL B 268 CG1 CG2 REMARK 470 ARG B 271 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 272 CG CD OE1 NE2 REMARK 470 LEU B 273 CG CD1 CD2 REMARK 470 GLU B 275 CG CD OE1 OE2 REMARK 470 VAL B 276 CG1 CG2 REMARK 470 LEU B 277 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG B 140 -80.70 -100.02 REMARK 500 LYS B 204 -56.80 -121.48 REMARK 500 LEU B 223 32.77 -96.95 REMARK 500 REMARK 500 REMARK: NULL DBREF 6NEO B 9 284 UNP O32504 PPRA_DEIRA 25 300 SEQADV 6NEO GLY B 7 UNP O32504 EXPRESSION TAG SEQADV 6NEO MET B 8 UNP O32504 EXPRESSION TAG SEQADV 6NEO LYS B 180 UNP O32504 ASP 196 ENGINEERED MUTATION SEQADV 6NEO LYS B 184 UNP O32504 ASP 200 ENGINEERED MUTATION SEQRES 1 B 278 GLY MET GLN THR ASP GLY ILE TYR ALA ALA PHE ASP THR SEQRES 2 B 278 LEU MET SER THR ALA GLY VAL ASP SER GLN ILE ALA ALA SEQRES 3 B 278 LEU ALA ALA SER GLU ALA ASP ALA GLY THR LEU ASP ALA SEQRES 4 B 278 ALA LEU THR GLN SER LEU GLN GLU ALA GLN GLY ARG TRP SEQRES 5 B 278 GLY LEU GLY LEU HIS HIS LEU ARG HIS GLU ALA ARG LEU SEQRES 6 B 278 THR ASP ASP GLY ASP ILE GLU ILE LEU THR ASP GLY ARG SEQRES 7 B 278 PRO SER ALA ARG VAL SER GLU GLY PHE GLY ALA LEU ALA SEQRES 8 B 278 GLN ALA TYR ALA PRO MET GLN ALA LEU ASP GLU ARG GLY SEQRES 9 B 278 LEU SER GLN TRP ALA ALA LEU GLY GLU GLY TYR ARG ALA SEQRES 10 B 278 PRO GLY ASP LEU PRO LEU ALA GLN LEU LYS VAL LEU ILE SEQRES 11 B 278 GLU HIS ALA ARG ASP PHE GLU THR ASP TRP SER ALA GLY SEQRES 12 B 278 ARG GLY GLU THR PHE GLN ARG VAL TRP ARG LYS GLY ASP SEQRES 13 B 278 THR LEU PHE VAL GLU VAL ALA ARG PRO ALA SER ALA GLU SEQRES 14 B 278 ALA ALA LEU SER LYS ALA ALA TRP LYS VAL ILE ALA SER SEQRES 15 B 278 ILE LYS ASP ARG ALA PHE GLN ARG GLU LEU MET ARG ARG SEQRES 16 B 278 SER GLU LYS ASP GLY MET LEU GLY ALA LEU LEU GLY ALA SEQRES 17 B 278 ARG HIS ALA GLY ALA LYS ALA ASN LEU ALA GLN LEU PRO SEQRES 18 B 278 GLU ALA HIS PHE THR VAL GLN ALA PHE VAL GLN THR LEU SEQRES 19 B 278 SER GLY ALA ALA ALA ARG ASN ALA GLU GLU TYR ARG ALA SEQRES 20 B 278 ALA LEU LYS THR ALA ALA ALA ALA LEU GLU GLU TYR GLN SEQRES 21 B 278 GLY VAL THR THR ARG GLN LEU SER GLU VAL LEU ARG HIS SEQRES 22 B 278 GLY LEU ARG GLU SER HELIX 1 AA1 TYR B 14 THR B 23 1 10 HELIX 2 AA2 GLN B 29 ALA B 35 1 7 HELIX 3 AA3 ASP B 39 GLY B 59 1 21 HELIX 4 AA4 GLY B 61 LEU B 65 5 5 HELIX 5 AA5 GLY B 92 ALA B 101 1 10 HELIX 6 AA6 PRO B 128 HIS B 138 1 11 HELIX 7 AA7 SER B 173 SER B 188 1 16 HELIX 8 AA8 ASP B 191 SER B 202 1 12 HELIX 9 AA9 ASP B 205 LEU B 212 1 8 HELIX 10 AB1 LEU B 226 HIS B 230 5 5 HELIX 11 AB2 ASN B 247 LEU B 273 1 27 HELIX 12 AB3 LEU B 273 ARG B 278 1 6 SHEET 1 AA1 3 HIS B 67 LEU B 71 0 SHEET 2 AA1 3 ILE B 77 THR B 81 -1 O LEU B 80 N GLU B 68 SHEET 3 AA1 3 ARG B 84 ARG B 88 -1 O ALA B 87 N ILE B 79 SHEET 1 AA2 3 PHE B 142 GLU B 143 0 SHEET 2 AA2 3 PHE B 154 LYS B 160 -1 O ARG B 159 N PHE B 142 SHEET 3 AA2 3 SER B 147 ALA B 148 -1 N SER B 147 O GLN B 155 SHEET 1 AA3 4 PHE B 142 GLU B 143 0 SHEET 2 AA3 4 PHE B 154 LYS B 160 -1 O ARG B 159 N PHE B 142 SHEET 3 AA3 4 THR B 163 ALA B 169 -1 O PHE B 165 N TRP B 158 SHEET 4 AA3 4 ALA B 235 SER B 241 -1 O LEU B 240 N LEU B 164 CRYST1 148.979 148.979 79.250 90.00 90.00 120.00 P 64 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006712 0.003875 0.000000 0.00000 SCALE2 0.000000 0.007751 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012618 0.00000