HEADER HYDROLASE 28-DEC-18 6NII TITLE CRYSTAL STRUCTURE OF RAVD (RESIDUES 1-200) FROM LEGIONELLA PNEUMOPHILA TITLE 2 (STRAIN CORBY) COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN RAVD; COMPND 3 CHAIN: B, A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEGIONELLA PNEUMOPHILA; SOURCE 3 ORGANISM_TAXID: 446; SOURCE 4 STRAIN: CORBY; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS DEUBIQUITINASE, BACTERIAL EFFECTOR, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR X.WANG,Y.ZHOU,Y.ZHU REVDAT 5 11-OCT-23 6NII 1 REMARK REVDAT 4 08-JAN-20 6NII 1 REMARK REVDAT 3 07-AUG-19 6NII 1 JRNL REVDAT 2 05-JUN-19 6NII 1 JRNL REVDAT 1 22-MAY-19 6NII 0 JRNL AUTH M.WAN,X.WANG,C.HUANG,D.XU,Z.WANG,Y.ZHOU,Y.ZHU JRNL TITL A BACTERIAL EFFECTOR DEUBIQUITINASE SPECIFICALLY HYDROLYSES JRNL TITL 2 LINEAR UBIQUITIN CHAINS TO INHIBIT HOST INFLAMMATORY JRNL TITL 3 SIGNALLING. JRNL REF NAT MICROBIOL V. 4 1282 2019 JRNL REFN ESSN 2058-5276 JRNL PMID 31110362 JRNL DOI 10.1038/S41564-019-0454-1 REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.01 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 21459 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.400 REMARK 3 FREE R VALUE TEST SET COUNT : 1218 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.15 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.21 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1570 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.88 REMARK 3 BIN R VALUE (WORKING SET) : 0.2770 REMARK 3 BIN FREE R VALUE SET COUNT : 107 REMARK 3 BIN FREE R VALUE : 0.2880 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2707 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 97 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 53.16 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.13000 REMARK 3 B22 (A**2) : -1.13000 REMARK 3 B33 (A**2) : 3.67000 REMARK 3 B12 (A**2) : -0.57000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.223 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.184 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.151 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.058 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.936 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2768 ; 0.009 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2559 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3747 ; 1.296 ; 1.926 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5875 ; 0.896 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 341 ; 6.518 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 131 ;38.361 ;25.115 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 450 ;14.672 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;17.407 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 409 ; 0.073 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3180 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 672 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 13 B 195 REMARK 3 ORIGIN FOR THE GROUP (A): 6.9643 -25.6726 -10.5383 REMARK 3 T TENSOR REMARK 3 T11: 0.0962 T22: 0.0892 REMARK 3 T33: 0.3036 T12: 0.0465 REMARK 3 T13: 0.0787 T23: 0.0632 REMARK 3 L TENSOR REMARK 3 L11: 0.8243 L22: 1.5496 REMARK 3 L33: 0.1384 L12: 0.2977 REMARK 3 L13: -0.2706 L23: -0.0181 REMARK 3 S TENSOR REMARK 3 S11: -0.1225 S12: -0.1158 S13: -0.4576 REMARK 3 S21: -0.1246 S22: -0.0234 S23: -0.2941 REMARK 3 S31: -0.0064 S32: -0.0136 S33: 0.1459 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 13 A 195 REMARK 3 ORIGIN FOR THE GROUP (A): 25.0702 -7.9641 -21.7289 REMARK 3 T TENSOR REMARK 3 T11: 0.0433 T22: 0.1177 REMARK 3 T33: 0.1470 T12: 0.0242 REMARK 3 T13: 0.0594 T23: 0.0093 REMARK 3 L TENSOR REMARK 3 L11: 1.1124 L22: 0.6599 REMARK 3 L33: 0.2892 L12: -0.3580 REMARK 3 L13: -0.0897 L23: 0.1867 REMARK 3 S TENSOR REMARK 3 S11: 0.0454 S12: 0.0088 S13: -0.0000 REMARK 3 S21: -0.0815 S22: -0.0070 S23: -0.2060 REMARK 3 S31: -0.0539 S32: 0.0598 S33: -0.0383 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 6NII COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-JAN-19. REMARK 100 THE DEPOSITION ID IS D_1000238802. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-NOV-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL18U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97930 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 715.5 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 715.5 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22916 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.150 REMARK 200 RESOLUTION RANGE LOW (A) : 50.010 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 8.400 REMARK 200 R MERGE (I) : 0.10700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.19 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 7.20 REMARK 200 R MERGE FOR SHELL (I) : 0.80300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX 1.14-3228 REMARK 200 STARTING MODEL: 6NJD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MMT (MALIC ACID, MES AND TRIS REMARK 280 (1:2:2 MOLAR RATIO), PH 4.5 ADJUSTED WITH HCL), 0.2 M AMMONIUM REMARK 280 CHLORIDE, 15% PEG3350, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 71.16750 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 41.08858 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 18.40500 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 71.16750 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 41.08858 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 18.40500 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 71.16750 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 41.08858 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 18.40500 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 82.17715 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 36.81000 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 82.17715 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 36.81000 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 82.17715 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 36.81000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10510 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 43040 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -61.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY B -4 REMARK 465 PRO B -3 REMARK 465 LEU B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 ASN B 2 REMARK 465 LEU B 3 REMARK 465 LYS B 4 REMARK 465 ALA B 5 REMARK 465 GLU B 6 REMARK 465 VAL B 7 REMARK 465 PHE B 8 REMARK 465 LEU B 9 REMARK 465 ASN B 10 REMARK 465 GLN B 11 REMARK 465 ASN B 12 REMARK 465 GLY B 37 REMARK 465 VAL B 38 REMARK 465 GLN B 39 REMARK 465 ASP B 40 REMARK 465 ARG B 196 REMARK 465 ALA B 197 REMARK 465 LYS B 198 REMARK 465 ALA B 199 REMARK 465 GLU B 200 REMARK 465 GLY A -4 REMARK 465 PRO A -3 REMARK 465 LEU A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 ASN A 2 REMARK 465 LEU A 3 REMARK 465 LYS A 4 REMARK 465 ALA A 5 REMARK 465 GLU A 6 REMARK 465 VAL A 7 REMARK 465 PHE A 8 REMARK 465 LEU A 9 REMARK 465 ASN A 10 REMARK 465 GLN A 11 REMARK 465 ASN A 12 REMARK 465 ARG A 36 REMARK 465 GLY A 37 REMARK 465 VAL A 38 REMARK 465 GLN A 39 REMARK 465 VAL A 135 REMARK 465 PRO A 136 REMARK 465 HIS A 137 REMARK 465 ALA A 138 REMARK 465 ASN A 139 REMARK 465 TRP A 140 REMARK 465 GLY A 141 REMARK 465 LYS A 142 REMARK 465 GLU A 143 REMARK 465 ASN A 144 REMARK 465 GLY A 145 REMARK 465 ASN A 146 REMARK 465 ARG A 196 REMARK 465 ALA A 197 REMARK 465 LYS A 198 REMARK 465 ALA A 199 REMARK 465 GLU A 200 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG B 36 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 67 CG CD OE1 OE2 REMARK 470 ASP B 121 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR B 35 62.10 -103.88 REMARK 500 HIS B 137 51.26 -108.27 REMARK 500 GLN B 172 -94.45 -140.81 REMARK 500 ASN A 115 89.07 -156.88 REMARK 500 GLN A 172 -94.50 -131.54 REMARK 500 REMARK 500 REMARK: NULL DBREF 6NII B -4 200 PDB 6NII 6NII -4 200 DBREF 6NII A -4 200 PDB 6NII 6NII -4 200 SEQRES 1 B 205 GLY PRO LEU GLY SER MET ASN LEU LYS ALA GLU VAL PHE SEQRES 2 B 205 LEU ASN GLN ASN CYS ALA GLU MET MET ILE LYS LYS ALA SEQRES 3 B 205 ALA GLN LEU ILE LEU GLY SER ASP LEU ASP PHE GLU TYR SEQRES 4 B 205 THR ARG GLY VAL GLN ASP ILE GLN VAL ASP LEU GLY PRO SEQRES 5 B 205 ALA PHE MET PHE SER PRO ASP GLU GLU LYS THR LEU TRP SEQRES 6 B 205 VAL SER GLY LYS ASN GLN GLU THR LEU GLU LYS ASP LEU SEQRES 7 B 205 ALA THR LEU ASN LYS SER SER VAL TYR PHE PHE ARG THR SEQRES 8 B 205 GLY THR GLN GLY GLY ALA GLY HIS TRP GLN VAL LEU TYR SEQRES 9 B 205 TYR GLU ALA ALA LYS SER GLY TRP VAL SER TYR SER SER SEQRES 10 B 205 GLN SER ASN HIS PHE GLN VAL THR ASP SER ASN GLY LYS SEQRES 11 B 205 LEU THR ALA SER GLY LYS GLY LEU LEU VAL PRO HIS ALA SEQRES 12 B 205 ASN TRP GLY LYS GLU ASN GLY ASN TYR ALA PHE LEU LEU SEQRES 13 B 205 VAL ASN ALA SER ALA GLU ASN ILE ILE HIS ALA ALA ASN SEQRES 14 B 205 PHE VAL TYR ILE LEU ARG THR GLN ASN GLU VAL ALA ALA SEQRES 15 B 205 ILE GLU TYR CYS ALA LEU ASN HIS GLU PHE HIS PRO GLU SEQRES 16 B 205 ILE LYS ARG THR ALA ARG ALA LYS ALA GLU SEQRES 1 A 205 GLY PRO LEU GLY SER MET ASN LEU LYS ALA GLU VAL PHE SEQRES 2 A 205 LEU ASN GLN ASN CYS ALA GLU MET MET ILE LYS LYS ALA SEQRES 3 A 205 ALA GLN LEU ILE LEU GLY SER ASP LEU ASP PHE GLU TYR SEQRES 4 A 205 THR ARG GLY VAL GLN ASP ILE GLN VAL ASP LEU GLY PRO SEQRES 5 A 205 ALA PHE MET PHE SER PRO ASP GLU GLU LYS THR LEU TRP SEQRES 6 A 205 VAL SER GLY LYS ASN GLN GLU THR LEU GLU LYS ASP LEU SEQRES 7 A 205 ALA THR LEU ASN LYS SER SER VAL TYR PHE PHE ARG THR SEQRES 8 A 205 GLY THR GLN GLY GLY ALA GLY HIS TRP GLN VAL LEU TYR SEQRES 9 A 205 TYR GLU ALA ALA LYS SER GLY TRP VAL SER TYR SER SER SEQRES 10 A 205 GLN SER ASN HIS PHE GLN VAL THR ASP SER ASN GLY LYS SEQRES 11 A 205 LEU THR ALA SER GLY LYS GLY LEU LEU VAL PRO HIS ALA SEQRES 12 A 205 ASN TRP GLY LYS GLU ASN GLY ASN TYR ALA PHE LEU LEU SEQRES 13 A 205 VAL ASN ALA SER ALA GLU ASN ILE ILE HIS ALA ALA ASN SEQRES 14 A 205 PHE VAL TYR ILE LEU ARG THR GLN ASN GLU VAL ALA ALA SEQRES 15 A 205 ILE GLU TYR CYS ALA LEU ASN HIS GLU PHE HIS PRO GLU SEQRES 16 A 205 ILE LYS ARG THR ALA ARG ALA LYS ALA GLU FORMUL 3 HOH *97(H2 O) HELIX 1 AA1 CYS B 13 GLY B 27 1 15 HELIX 2 AA2 LEU B 45 MET B 50 5 6 HELIX 3 AA3 PRO B 53 GLU B 55 5 3 HELIX 4 AA4 ASN B 65 ALA B 74 1 10 HELIX 5 AA5 THR B 127 GLY B 132 1 6 HELIX 6 AA6 SER B 155 GLN B 172 1 18 HELIX 7 AA7 ASN B 173 ASN B 184 1 12 HELIX 8 AA8 ALA A 14 GLY A 27 1 14 HELIX 9 AA9 LEU A 45 MET A 50 5 6 HELIX 10 AB1 PRO A 53 GLU A 55 5 3 HELIX 11 AB2 GLN A 66 LEU A 76 1 11 HELIX 12 AB3 ALA A 102 SER A 105 5 4 HELIX 13 AB4 THR A 127 GLY A 132 1 6 HELIX 14 AB5 SER A 155 GLN A 172 1 18 HELIX 15 AB6 ASN A 173 ASN A 184 1 12 SHEET 1 AA1 2 ASP B 29 PHE B 32 0 SHEET 2 AA1 2 ILE B 191 THR B 194 -1 O THR B 194 N ASP B 29 SHEET 1 AA2 6 LYS B 57 TRP B 60 0 SHEET 2 AA2 6 TYR B 147 ASN B 153 -1 O PHE B 149 N TRP B 60 SHEET 3 AA2 6 TYR B 82 THR B 88 -1 N PHE B 83 O VAL B 152 SHEET 4 AA2 6 GLY B 93 GLU B 101 -1 O GLN B 96 N PHE B 84 SHEET 5 AA2 6 GLY B 106 TYR B 110 -1 O VAL B 108 N TYR B 99 SHEET 6 AA2 6 HIS B 116 GLN B 118 -1 O PHE B 117 N SER B 109 SHEET 1 AA3 2 ASP A 29 PHE A 32 0 SHEET 2 AA3 2 ILE A 191 THR A 194 -1 O LYS A 192 N ASP A 31 SHEET 1 AA4 6 LYS A 57 VAL A 61 0 SHEET 2 AA4 6 ALA A 148 ASN A 153 -1 O LEU A 151 N THR A 58 SHEET 3 AA4 6 VAL A 81 GLY A 87 -1 N ARG A 85 O LEU A 150 SHEET 4 AA4 6 HIS A 94 GLU A 101 -1 O GLN A 96 N PHE A 84 SHEET 5 AA4 6 GLY A 106 SER A 112 -1 O VAL A 108 N TYR A 99 SHEET 6 AA4 6 ASN A 115 GLN A 118 -1 O PHE A 117 N SER A 109 CRYST1 142.335 142.335 55.215 90.00 90.00 120.00 H 3 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007026 0.004056 0.000000 0.00000 SCALE2 0.000000 0.008113 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018111 0.00000