HEADER ISOMERASE 14-JAN-19 6NN1 TITLE XANTHOMONAS CITRI PGM APO-DEPHOSPHO COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHOGLUCOMUTASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: XANTHOMONAS AXONOPODIS PV. CITRI (STRAIN 306); SOURCE 3 ORGANISM_TAXID: 190486; SOURCE 4 STRAIN: 306; SOURCE 5 GENE: XANA, XAC3579; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PHOSPHOGLUCOMUTASE, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR K.M.STIERS,L.J.BEAMER REVDAT 4 11-OCT-23 6NN1 1 REMARK REVDAT 3 27-NOV-19 6NN1 1 REMARK REVDAT 2 15-MAY-19 6NN1 1 JRNL REVDAT 1 10-APR-19 6NN1 0 JRNL AUTH K.M.STIERS,A.C.GRAHAM,J.S.ZHU,D.L.JAKEMAN,J.C.NIX,L.J.BEAMER JRNL TITL STRUCTURAL AND DYNAMICAL DESCRIPTION OF THE ENZYMATIC JRNL TITL 2 REACTION OF A PHOSPHOHEXOMUTASE. JRNL REF STRUCT DYN. V. 6 24703 2019 JRNL REFN ESSN 2329-7778 JRNL PMID 31041362 JRNL DOI 10.1063/1.5092803 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.11.1_2575 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.02 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 67460 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.205 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.860 REMARK 3 FREE R VALUE TEST SET COUNT : 3277 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 86.1216 - 4.2656 1.00 3034 162 0.1388 0.1429 REMARK 3 2 4.2656 - 3.3857 1.00 2866 148 0.1323 0.1860 REMARK 3 3 3.3857 - 2.9577 1.00 2842 154 0.1604 0.1982 REMARK 3 4 2.9577 - 2.6873 1.00 2830 152 0.1712 0.2266 REMARK 3 5 2.6873 - 2.4946 1.00 2785 165 0.1658 0.1961 REMARK 3 6 2.4946 - 2.3475 1.00 2802 142 0.1662 0.2026 REMARK 3 7 2.3475 - 2.2300 1.00 2806 134 0.1676 0.1901 REMARK 3 8 2.2300 - 2.1329 1.00 2790 139 0.1620 0.1870 REMARK 3 9 2.1329 - 2.0508 1.00 2798 137 0.1765 0.2147 REMARK 3 10 2.0508 - 1.9800 1.00 2757 151 0.1895 0.2107 REMARK 3 11 1.9800 - 1.9181 1.00 2786 124 0.1838 0.2504 REMARK 3 12 1.9181 - 1.8633 1.00 2770 140 0.1900 0.2262 REMARK 3 13 1.8633 - 1.8142 1.00 2774 141 0.1908 0.2244 REMARK 3 14 1.8142 - 1.7699 1.00 2743 142 0.1915 0.2371 REMARK 3 15 1.7699 - 1.7297 1.00 2779 151 0.2106 0.2449 REMARK 3 16 1.7297 - 1.6929 1.00 2733 144 0.2280 0.2517 REMARK 3 17 1.6929 - 1.6590 1.00 2755 138 0.2447 0.2969 REMARK 3 18 1.6590 - 1.6277 1.00 2765 126 0.2563 0.2735 REMARK 3 19 1.6277 - 1.5986 1.00 2780 119 0.2535 0.2978 REMARK 3 20 1.5986 - 1.5715 1.00 2727 133 0.2689 0.3001 REMARK 3 21 1.5715 - 1.5462 1.00 2786 148 0.3003 0.3278 REMARK 3 22 1.5462 - 1.5224 1.00 2707 138 0.3166 0.3648 REMARK 3 23 1.5224 - 1.5000 1.00 2768 149 0.3542 0.3769 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.620 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 3703 REMARK 3 ANGLE : 0.840 5033 REMARK 3 CHIRALITY : 0.054 545 REMARK 3 PLANARITY : 0.006 675 REMARK 3 DIHEDRAL : 4.442 2983 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 23:71 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.8444 35.7990 12.8363 REMARK 3 T TENSOR REMARK 3 T11: 0.2137 T22: 0.1787 REMARK 3 T33: 0.1799 T12: 0.0115 REMARK 3 T13: 0.0222 T23: -0.0437 REMARK 3 L TENSOR REMARK 3 L11: 0.3038 L22: 0.5028 REMARK 3 L33: 0.4351 L12: -0.4199 REMARK 3 L13: -0.0014 L23: 0.1390 REMARK 3 S TENSOR REMARK 3 S11: 0.0340 S12: 0.0532 S13: -0.0680 REMARK 3 S21: -0.0888 S22: -0.0668 S23: 0.1091 REMARK 3 S31: 0.1173 S32: 0.0299 S33: -0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 72:135 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.6165 39.4805 20.2831 REMARK 3 T TENSOR REMARK 3 T11: 0.1573 T22: 0.1722 REMARK 3 T33: 0.1641 T12: 0.0253 REMARK 3 T13: 0.0248 T23: -0.0299 REMARK 3 L TENSOR REMARK 3 L11: 0.0976 L22: 0.6891 REMARK 3 L33: 0.5569 L12: -0.1102 REMARK 3 L13: -0.1656 L23: 0.0209 REMARK 3 S TENSOR REMARK 3 S11: -0.0206 S12: -0.0378 S13: 0.0044 REMARK 3 S21: 0.0204 S22: 0.0605 S23: 0.0407 REMARK 3 S31: 0.0919 S32: 0.0230 S33: -0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 136:219 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.7669 43.8723 28.9285 REMARK 3 T TENSOR REMARK 3 T11: 0.1596 T22: 0.1871 REMARK 3 T33: 0.1627 T12: 0.0169 REMARK 3 T13: 0.0068 T23: -0.0155 REMARK 3 L TENSOR REMARK 3 L11: 0.3175 L22: 0.4835 REMARK 3 L33: 0.8664 L12: -0.2250 REMARK 3 L13: -0.3421 L23: 0.4660 REMARK 3 S TENSOR REMARK 3 S11: -0.0094 S12: -0.0794 S13: -0.0086 REMARK 3 S21: -0.0144 S22: 0.0373 S23: -0.0207 REMARK 3 S31: 0.0592 S32: 0.1651 S33: -0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN A AND RESID 220:372 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.1768 56.1144 27.9537 REMARK 3 T TENSOR REMARK 3 T11: 0.1368 T22: 0.1585 REMARK 3 T33: 0.1693 T12: -0.0013 REMARK 3 T13: 0.0226 T23: -0.0098 REMARK 3 L TENSOR REMARK 3 L11: -0.0060 L22: 0.3299 REMARK 3 L33: 0.5573 L12: 0.0291 REMARK 3 L13: -0.0992 L23: -0.2100 REMARK 3 S TENSOR REMARK 3 S11: -0.0173 S12: 0.0216 S13: 0.0004 REMARK 3 S21: -0.0070 S22: -0.0030 S23: -0.0272 REMARK 3 S31: 0.0003 S32: -0.0346 S33: 0.0000 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN A AND RESID 373:399 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.9904 61.9913 25.2921 REMARK 3 T TENSOR REMARK 3 T11: 0.2061 T22: 0.1673 REMARK 3 T33: 0.1669 T12: 0.0108 REMARK 3 T13: 0.0178 T23: -0.0209 REMARK 3 L TENSOR REMARK 3 L11: 0.1073 L22: 0.3527 REMARK 3 L33: 0.2004 L12: -0.0370 REMARK 3 L13: 0.0681 L23: -0.3665 REMARK 3 S TENSOR REMARK 3 S11: -0.0010 S12: 0.0048 S13: -0.0902 REMARK 3 S21: -0.0171 S22: 0.0830 S23: 0.0027 REMARK 3 S31: -0.0384 S32: 0.0624 S33: -0.0000 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: ( CHAIN A AND RESID 400:430 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.8963 67.2172 5.5870 REMARK 3 T TENSOR REMARK 3 T11: 0.2510 T22: 0.2188 REMARK 3 T33: 0.2020 T12: 0.0149 REMARK 3 T13: 0.0088 T23: -0.0152 REMARK 3 L TENSOR REMARK 3 L11: 0.0886 L22: 0.2531 REMARK 3 L33: 0.2734 L12: 0.0316 REMARK 3 L13: 0.0025 L23: -0.1832 REMARK 3 S TENSOR REMARK 3 S11: -0.0136 S12: 0.1225 S13: 0.0092 REMARK 3 S21: -0.1999 S22: 0.0917 S23: -0.1001 REMARK 3 S31: -0.0911 S32: 0.0514 S33: 0.0001 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: ( CHAIN A AND RESID 431:448 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.0844 61.3513 12.8161 REMARK 3 T TENSOR REMARK 3 T11: 0.1819 T22: 0.1660 REMARK 3 T33: 0.1896 T12: 0.0054 REMARK 3 T13: 0.0118 T23: -0.0304 REMARK 3 L TENSOR REMARK 3 L11: 0.2429 L22: 0.3376 REMARK 3 L33: 0.3763 L12: 0.2336 REMARK 3 L13: -0.0324 L23: -0.3239 REMARK 3 S TENSOR REMARK 3 S11: 0.0241 S12: 0.0919 S13: -0.0395 REMARK 3 S21: 0.0035 S22: 0.0308 S23: 0.0400 REMARK 3 S31: 0.0354 S32: -0.0625 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6NN1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-JAN-19. REMARK 100 THE DEPOSITION ID IS D_1000238976. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-DEC-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 4.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00003 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CMOS REMARK 200 DETECTOR MANUFACTURER : RDI CMOS_8M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 67541 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 44.020 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.30 REMARK 200 R MERGE (I) : 0.10700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 12.00 REMARK 200 R MERGE FOR SHELL (I) : 2.95000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5BMN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.02 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22% PEG 8000, 0.2M MGCL, 0.1M HEPES, REMARK 280 PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 22.01000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 85.98000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 27.30500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 85.98000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 22.01000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 27.30500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 VAL A 358 N CA C O CB CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 193 O HOH A 601 2.11 REMARK 500 O HOH A 966 O HOH A 1092 2.12 REMARK 500 O HOH A 755 O HOH A 773 2.17 REMARK 500 O HOH A 849 O HOH A 1039 2.18 REMARK 500 O HOH A 842 O HOH A 1015 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 45 -166.81 -100.99 REMARK 500 SER A 97 -84.01 61.78 REMARK 500 ARG A 110 -149.68 -110.27 REMARK 500 ARG A 110 -149.07 -110.42 REMARK 500 PHE A 240 35.82 39.52 REMARK 500 THR A 282 -42.13 -132.60 REMARK 500 SER A 322 35.93 -91.06 REMARK 500 SER A 322 35.93 -92.26 REMARK 500 PHE A 330 47.15 -95.15 REMARK 500 ASP A 400 89.69 -153.88 REMARK 500 PRO A 420 72.99 -62.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1111 DISTANCE = 6.39 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 501 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 97 OG REMARK 620 2 ASP A 237 OD2 86.9 REMARK 620 3 ASP A 239 OD1 86.1 94.9 REMARK 620 4 ASP A 241 OD1 173.8 99.1 91.7 REMARK 620 5 HOH A 626 O 87.5 168.9 94.3 86.9 REMARK 620 6 HOH A 772 O 90.5 86.3 176.3 91.5 84.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 505 DBREF 6NN1 A 1 448 UNP Q8PGN7 Q8PGN7_XANAC 3 450 SEQADV 6NN1 MET A -19 UNP Q8PGN7 INITIATING METHIONINE SEQADV 6NN1 GLY A -18 UNP Q8PGN7 EXPRESSION TAG SEQADV 6NN1 SER A -17 UNP Q8PGN7 EXPRESSION TAG SEQADV 6NN1 SER A -16 UNP Q8PGN7 EXPRESSION TAG SEQADV 6NN1 HIS A -15 UNP Q8PGN7 EXPRESSION TAG SEQADV 6NN1 HIS A -14 UNP Q8PGN7 EXPRESSION TAG SEQADV 6NN1 HIS A -13 UNP Q8PGN7 EXPRESSION TAG SEQADV 6NN1 HIS A -12 UNP Q8PGN7 EXPRESSION TAG SEQADV 6NN1 HIS A -11 UNP Q8PGN7 EXPRESSION TAG SEQADV 6NN1 HIS A -10 UNP Q8PGN7 EXPRESSION TAG SEQADV 6NN1 SER A -9 UNP Q8PGN7 EXPRESSION TAG SEQADV 6NN1 SER A -8 UNP Q8PGN7 EXPRESSION TAG SEQADV 6NN1 GLY A -7 UNP Q8PGN7 EXPRESSION TAG SEQADV 6NN1 LEU A -6 UNP Q8PGN7 EXPRESSION TAG SEQADV 6NN1 VAL A -5 UNP Q8PGN7 EXPRESSION TAG SEQADV 6NN1 PRO A -4 UNP Q8PGN7 EXPRESSION TAG SEQADV 6NN1 ARG A -3 UNP Q8PGN7 EXPRESSION TAG SEQADV 6NN1 GLY A -2 UNP Q8PGN7 EXPRESSION TAG SEQADV 6NN1 SER A -1 UNP Q8PGN7 EXPRESSION TAG SEQADV 6NN1 HIS A 0 UNP Q8PGN7 EXPRESSION TAG SEQRES 1 A 468 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 468 LEU VAL PRO ARG GLY SER HIS MET THR LEU PRO ALA PHE SEQRES 3 A 468 LYS ALA TYR ASP ILE ARG GLY ARG VAL PRO ASP GLU LEU SEQRES 4 A 468 ASN GLU ASP LEU ALA ARG ARG ILE GLY VAL ALA LEU ALA SEQRES 5 A 468 ALA GLN LEU ASP GLN GLY PRO VAL VAL LEU GLY HIS ASP SEQRES 6 A 468 VAL ARG LEU ALA SER PRO ALA LEU GLN GLU ALA LEU SER SEQRES 7 A 468 ALA GLY LEU ARG ALA SER GLY ARG ASP VAL ILE ASP ILE SEQRES 8 A 468 GLY LEU CYS GLY THR GLU GLU VAL TYR PHE GLN THR ASP SEQRES 9 A 468 TYR LEU LYS ALA ALA GLY GLY VAL MET VAL THR ALA SER SEQRES 10 A 468 HIS ASN PRO MET ASP TYR ASN GLY MET LYS LEU VAL ARG SEQRES 11 A 468 GLU GLN ALA ARG PRO ILE SER SER ASP THR GLY LEU PHE SEQRES 12 A 468 ALA ILE ARG ASP THR VAL ALA ALA ASP THR ALA ALA PRO SEQRES 13 A 468 GLY GLU PRO THR ALA SER GLU GLN SER ARG THR ASP LYS SEQRES 14 A 468 THR ALA TYR LEU GLU HIS LEU LEU SER TYR VAL ASP ARG SEQRES 15 A 468 SER THR LEU LYS PRO LEU LYS LEU VAL VAL ASN ALA GLY SEQRES 16 A 468 ASN GLY GLY ALA GLY LEU ILE VAL ASP LEU LEU ALA PRO SEQRES 17 A 468 HIS LEU PRO PHE GLU PHE VAL ARG VAL PHE HIS GLU PRO SEQRES 18 A 468 ASP GLY ASN PHE PRO ASN GLY ILE PRO ASN PRO LEU LEU SEQRES 19 A 468 PRO GLU ASN ARG ASP ALA THR ALA LYS ALA VAL LYS ASP SEQRES 20 A 468 ASN GLY ALA ASP PHE GLY ILE ALA TRP ASP GLY ASP PHE SEQRES 21 A 468 ASP ARG CYS PHE PHE PHE ASP HIS THR GLY ARG PHE ILE SEQRES 22 A 468 GLU GLY TYR TYR LEU VAL GLY LEU LEU ALA GLN ALA ILE SEQRES 23 A 468 LEU ALA LYS GLN PRO GLY GLY LYS VAL VAL HIS ASP PRO SEQRES 24 A 468 ARG LEU THR TRP ASN THR VAL GLU GLN VAL GLU GLU ALA SEQRES 25 A 468 GLY GLY ILE PRO VAL LEU CYS LYS SER GLY HIS ALA PHE SEQRES 26 A 468 ILE LYS GLU LYS MET ARG SER GLU ASN ALA VAL TYR GLY SEQRES 27 A 468 GLY GLU MET SER ALA HIS HIS TYR PHE ARG GLU PHE ALA SEQRES 28 A 468 TYR ALA ASP SER GLY MET ILE PRO TRP LEU LEU ILE ALA SEQRES 29 A 468 GLU LEU VAL SER GLN SER GLY ARG SER LEU ALA ASP LEU SEQRES 30 A 468 VAL GLU ALA ARG MET GLN LYS PHE PRO CYS SER GLY GLU SEQRES 31 A 468 ILE ASN PHE LYS VAL ALA ASP ALA LYS ALA SER VAL ALA SEQRES 32 A 468 ARG VAL MET GLU HIS TYR ALA SER LEU SER PRO GLU LEU SEQRES 33 A 468 ASP TYR THR ASP GLY ILE SER ALA ASP PHE GLY GLN TRP SEQRES 34 A 468 ARG PHE ASN LEU ARG SER SER ASN THR GLU PRO LEU LEU SEQRES 35 A 468 ARG LEU ASN VAL GLU THR ARG GLY ASP ALA ALA LEU LEU SEQRES 36 A 468 GLU THR ARG THR GLN GLU ILE SER ASN LEU LEU ARG GLY HET MG A 501 1 HET PEG A 502 7 HET PEG A 503 7 HET PEG A 504 7 HET PO4 A 505 5 HETNAM MG MAGNESIUM ION HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM PO4 PHOSPHATE ION FORMUL 2 MG MG 2+ FORMUL 3 PEG 3(C4 H10 O3) FORMUL 6 PO4 O4 P 3- FORMUL 7 HOH *511(H2 O) HELIX 1 AA1 ASN A 20 LEU A 35 1 16 HELIX 2 AA2 ALA A 49 SER A 64 1 16 HELIX 3 AA3 GLY A 75 LEU A 86 1 12 HELIX 4 AA4 ARG A 110 ARG A 114 5 5 HELIX 5 AA5 GLY A 121 ASP A 132 1 12 HELIX 6 AA6 LYS A 149 SER A 158 1 10 HELIX 7 AA7 TYR A 159 VAL A 160 5 2 HELIX 8 AA8 ASP A 161 LEU A 165 5 5 HELIX 9 AA9 GLY A 178 ALA A 187 1 10 HELIX 10 AB1 PRO A 188 LEU A 190 5 3 HELIX 11 AB2 LEU A 214 GLY A 229 1 16 HELIX 12 AB3 GLU A 254 GLN A 270 1 17 HELIX 13 AB4 THR A 282 ALA A 292 1 11 HELIX 14 AB5 GLY A 302 ASN A 314 1 13 HELIX 15 AB6 MET A 337 GLY A 351 1 15 HELIX 16 AB7 SER A 353 PHE A 365 1 13 HELIX 17 AB8 ASP A 377 ALA A 390 1 14 HELIX 18 AB9 SER A 391 SER A 393 5 3 HELIX 19 AC1 ASP A 431 GLY A 448 1 18 SHEET 1 AA1 6 ILE A 11 ARG A 14 0 SHEET 2 AA1 6 TYR A 103 VAL A 109 -1 O MET A 106 N ILE A 11 SHEET 3 AA1 6 GLY A 90 VAL A 94 -1 N GLY A 91 O VAL A 109 SHEET 4 AA1 6 VAL A 40 HIS A 44 1 N GLY A 43 O VAL A 94 SHEET 5 AA1 6 VAL A 68 LEU A 73 1 O ILE A 69 N LEU A 42 SHEET 6 AA1 6 GLU A 143 SER A 145 1 O GLN A 144 N ASP A 70 SHEET 1 AA2 4 GLU A 193 VAL A 197 0 SHEET 2 AA2 4 LYS A 169 ASN A 173 1 N VAL A 172 O VAL A 197 SHEET 3 AA2 4 PHE A 232 TRP A 236 1 O ILE A 234 N ASN A 173 SHEET 4 AA2 4 CYS A 243 PHE A 246 -1 O PHE A 246 N GLY A 233 SHEET 1 AA3 4 ILE A 295 LEU A 298 0 SHEET 2 AA3 4 LYS A 274 HIS A 277 1 N VAL A 275 O VAL A 297 SHEET 3 AA3 4 TYR A 317 GLU A 320 1 O GLY A 319 N VAL A 276 SHEET 4 AA3 4 HIS A 324 PHE A 327 -1 O TYR A 326 N GLY A 318 SHEET 1 AA4 5 ILE A 371 LYS A 374 0 SHEET 2 AA4 5 LEU A 421 THR A 428 -1 O LEU A 424 N ILE A 371 SHEET 3 AA4 5 TRP A 409 SER A 415 -1 N ARG A 414 O ARG A 423 SHEET 4 AA4 5 ILE A 402 ASP A 405 -1 N ALA A 404 O PHE A 411 SHEET 5 AA4 5 GLU A 395 ASP A 397 -1 N GLU A 395 O ASP A 405 LINK OG SER A 97 MG MG A 501 1555 1555 2.18 LINK OD2 ASP A 237 MG MG A 501 1555 1555 1.96 LINK OD1 ASP A 239 MG MG A 501 1555 1555 2.15 LINK OD1 ASP A 241 MG MG A 501 1555 1555 2.07 LINK MG MG A 501 O HOH A 626 1555 1555 2.10 LINK MG MG A 501 O HOH A 772 1555 1555 2.08 CISPEP 1 VAL A 15 PRO A 16 0 9.58 SITE 1 AC1 6 SER A 97 ASP A 237 ASP A 239 ASP A 241 SITE 2 AC1 6 HOH A 626 HOH A 772 SITE 1 AC2 6 SER A 145 ARG A 146 THR A 147 ASP A 148 SITE 2 AC2 6 SER A 163 HOH A 609 SITE 1 AC3 2 GLU A 154 HIS A 189 SITE 1 AC4 3 ALA A 141 SER A 142 GLN A 408 SITE 1 AC5 5 ARG A 414 ARG A 423 HOH A 617 HOH A 712 SITE 2 AC5 5 HOH A 749 CRYST1 44.020 54.610 171.960 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022717 0.000000 0.000000 0.00000 SCALE2 0.000000 0.018312 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005815 0.00000