HEADER SPLICING 21-JAN-19 6NQI TITLE PRP8 RH DOMAIN FROM C. MEROLAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PRE-MRNA SPLICING FACTOR PRP8; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RH DOMAIN (UNP RESIDUES 1848-2065); COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CYANIDIOSCHYZON MEROLAE (STRAIN 10D); SOURCE 3 ORGANISM_COMMON: RED ALGA; SOURCE 4 ORGANISM_TAXID: 280699; SOURCE 5 STRAIN: 10D; SOURCE 6 GENE: CYME_CMH168C; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SPLICEOSOME, RNASE H, SPLICING EXPDTA X-RAY DIFFRACTION AUTHOR E.L.GARSIDE,A.M.MACMILLAN REVDAT 4 11-OCT-23 6NQI 1 REMARK REVDAT 3 08-JAN-20 6NQI 1 REMARK REVDAT 2 03-JUL-19 6NQI 1 JRNL REVDAT 1 22-MAY-19 6NQI 0 JRNL AUTH E.L.GARSIDE,T.A.WHELAN,M.R.STARK,S.D.RADER,N.M.FAST, JRNL AUTH 2 A.M.MACMILLAN JRNL TITL PRP8 IN A REDUCED SPLICEOSOME LACKS A CONSERVED TOGGLE THAT JRNL TITL 2 CORRELATES WITH SPLICING COMPLEXITY ACROSS DIVERSE TAXA. JRNL REF J.MOL.BIOL. V. 431 2543 2019 JRNL REFN ESSN 1089-8638 JRNL PMID 31078556 JRNL DOI 10.1016/J.JMB.2019.04.047 REMARK 2 REMARK 2 RESOLUTION. 2.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.43 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 11370 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.214 REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.263 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.940 REMARK 3 FREE R VALUE TEST SET COUNT : 562 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.4277 - 4.3636 1.00 2750 151 0.1743 0.2025 REMARK 3 2 4.3636 - 3.4644 0.99 2682 138 0.2213 0.3027 REMARK 3 3 3.4644 - 3.0267 1.00 2695 143 0.2660 0.3205 REMARK 3 4 3.0267 - 2.7501 1.00 2681 130 0.2687 0.3603 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.390 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.040 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 58.83 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 77.97 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1851 THROUGH 1862 ) REMARK 3 ORIGIN FOR THE GROUP (A): -31.0831 -9.5390 -12.2735 REMARK 3 T TENSOR REMARK 3 T11: 0.6841 T22: 0.6284 REMARK 3 T33: 0.5123 T12: -0.1805 REMARK 3 T13: -0.0753 T23: 0.0603 REMARK 3 L TENSOR REMARK 3 L11: 8.0205 L22: 5.8889 REMARK 3 L33: 5.4107 L12: -2.4712 REMARK 3 L13: -5.2721 L23: 2.6629 REMARK 3 S TENSOR REMARK 3 S11: 0.2065 S12: 1.8251 S13: 0.2358 REMARK 3 S21: -1.1549 S22: 0.7296 S23: -0.6664 REMARK 3 S31: -0.4095 S32: 0.2651 S33: -0.5618 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1863 THROUGH 1957 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.9220 -11.1085 2.9704 REMARK 3 T TENSOR REMARK 3 T11: 0.3924 T22: 0.3149 REMARK 3 T33: 0.4237 T12: -0.0024 REMARK 3 T13: -0.0723 T23: -0.0459 REMARK 3 L TENSOR REMARK 3 L11: 6.3770 L22: 1.7847 REMARK 3 L33: 9.0730 L12: 0.6920 REMARK 3 L13: 0.1290 L23: -1.3333 REMARK 3 S TENSOR REMARK 3 S11: -0.2223 S12: -0.3711 S13: 0.1925 REMARK 3 S21: 0.0829 S22: 0.0401 S23: 0.1732 REMARK 3 S31: 0.0863 S32: -0.7083 S33: 0.2432 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1958 THROUGH 2047 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.6803 -8.1518 -7.5754 REMARK 3 T TENSOR REMARK 3 T11: 0.4972 T22: 0.6155 REMARK 3 T33: 0.4970 T12: -0.0968 REMARK 3 T13: -0.0972 T23: 0.0115 REMARK 3 L TENSOR REMARK 3 L11: 8.2051 L22: 3.3128 REMARK 3 L33: 7.3921 L12: 1.1095 REMARK 3 L13: -0.1569 L23: 0.6600 REMARK 3 S TENSOR REMARK 3 S11: -0.5162 S12: 0.5491 S13: 0.1769 REMARK 3 S21: 0.0401 S22: 0.3840 S23: -0.2349 REMARK 3 S31: -0.3668 S32: 1.7921 S33: -0.0099 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2048 THROUGH 2059 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.5391 -10.1468 -20.8669 REMARK 3 T TENSOR REMARK 3 T11: 0.8103 T22: 1.7434 REMARK 3 T33: 0.6856 T12: -0.1058 REMARK 3 T13: 0.1050 T23: -0.0369 REMARK 3 L TENSOR REMARK 3 L11: 3.6532 L22: 0.2226 REMARK 3 L33: 4.0001 L12: 0.0461 REMARK 3 L13: 0.1982 L23: -0.7311 REMARK 3 S TENSOR REMARK 3 S11: -0.1618 S12: 1.7248 S13: 0.5343 REMARK 3 S21: -0.0191 S22: 0.7177 S23: -0.2379 REMARK 3 S31: -0.0845 S32: 1.5851 S33: -0.8421 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1853 THROUGH 1902 ) REMARK 3 ORIGIN FOR THE GROUP (A): -37.6509 -3.1773 -38.1560 REMARK 3 T TENSOR REMARK 3 T11: 0.4789 T22: 1.2439 REMARK 3 T33: 0.5050 T12: -0.0720 REMARK 3 T13: -0.0321 T23: -0.1393 REMARK 3 L TENSOR REMARK 3 L11: 4.5985 L22: 4.7786 REMARK 3 L33: 1.0430 L12: 1.4777 REMARK 3 L13: 0.4308 L23: -0.8841 REMARK 3 S TENSOR REMARK 3 S11: 0.0794 S12: 0.1186 S13: -0.2101 REMARK 3 S21: -0.0599 S22: -0.3240 S23: 0.1741 REMARK 3 S31: -0.0059 S32: -1.7555 S33: -0.1067 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1903 THROUGH 1952 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.6944 -6.3103 -38.6100 REMARK 3 T TENSOR REMARK 3 T11: 0.4155 T22: 0.8474 REMARK 3 T33: 0.4283 T12: -0.1294 REMARK 3 T13: 0.0167 T23: 0.0523 REMARK 3 L TENSOR REMARK 3 L11: 0.9087 L22: 7.6065 REMARK 3 L33: 6.4169 L12: 0.2073 REMARK 3 L13: -0.0185 L23: 2.9760 REMARK 3 S TENSOR REMARK 3 S11: 0.2760 S12: -0.1913 S13: 0.0063 REMARK 3 S21: 0.2343 S22: -0.4251 S23: -0.0204 REMARK 3 S31: 0.3600 S32: -0.1346 S33: 0.2249 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1953 THROUGH 1969 ) REMARK 3 ORIGIN FOR THE GROUP (A): -39.3495 -5.1702 -30.9480 REMARK 3 T TENSOR REMARK 3 T11: 0.2448 T22: 1.6653 REMARK 3 T33: 0.5195 T12: -0.4168 REMARK 3 T13: 0.1455 T23: -0.2070 REMARK 3 L TENSOR REMARK 3 L11: 5.5549 L22: 4.3622 REMARK 3 L33: 2.9407 L12: -3.7042 REMARK 3 L13: -1.5150 L23: 2.8066 REMARK 3 S TENSOR REMARK 3 S11: -0.4282 S12: -0.7628 S13: -0.3384 REMARK 3 S21: 1.6018 S22: -0.1645 S23: 1.2057 REMARK 3 S31: 1.6204 S32: -0.9491 S33: -0.1324 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1970 THROUGH 1998 ) REMARK 3 ORIGIN FOR THE GROUP (A): -42.4763 7.6605 -38.3959 REMARK 3 T TENSOR REMARK 3 T11: 0.7239 T22: 1.1718 REMARK 3 T33: 0.6466 T12: 0.1972 REMARK 3 T13: -0.1354 T23: -0.1797 REMARK 3 L TENSOR REMARK 3 L11: 1.3496 L22: 2.2147 REMARK 3 L33: 5.4068 L12: 0.7175 REMARK 3 L13: 0.8367 L23: 3.3304 REMARK 3 S TENSOR REMARK 3 S11: -0.1495 S12: 0.2731 S13: 0.3499 REMARK 3 S21: -0.6413 S22: -0.6797 S23: 0.2987 REMARK 3 S31: -1.3636 S32: -1.4587 S33: 0.8490 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1999 THROUGH 2047 ) REMARK 3 ORIGIN FOR THE GROUP (A): -47.9443 6.1424 -27.1385 REMARK 3 T TENSOR REMARK 3 T11: 0.6279 T22: 1.5559 REMARK 3 T33: 0.6366 T12: -0.0975 REMARK 3 T13: -0.0239 T23: -0.2815 REMARK 3 L TENSOR REMARK 3 L11: 5.0484 L22: 2.2459 REMARK 3 L33: 7.5531 L12: -3.1342 REMARK 3 L13: 4.1780 L23: -1.6070 REMARK 3 S TENSOR REMARK 3 S11: -0.0894 S12: -0.8995 S13: 0.1183 REMARK 3 S21: -0.7232 S22: -0.2970 S23: 0.6419 REMARK 3 S31: 0.0990 S32: -2.7164 S33: 0.4253 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2048 THROUGH 2058 ) REMARK 3 ORIGIN FOR THE GROUP (A): -50.4920 12.5936 -20.1129 REMARK 3 T TENSOR REMARK 3 T11: 0.7764 T22: 2.1788 REMARK 3 T33: 0.7890 T12: 0.3141 REMARK 3 T13: 0.1710 T23: -0.4621 REMARK 3 L TENSOR REMARK 3 L11: 2.9821 L22: 6.7798 REMARK 3 L33: 0.9111 L12: 4.2245 REMARK 3 L13: -0.5625 L23: -1.4815 REMARK 3 S TENSOR REMARK 3 S11: 0.4590 S12: -0.0268 S13: 1.5966 REMARK 3 S21: 1.0133 S22: 0.7796 S23: 2.2740 REMARK 3 S31: -1.4255 S32: -2.0011 S33: 0.1629 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 1853 THROUGH 1897 OR REMARK 3 RESID 1902 THROUGH 2025 OR RESID 2041 REMARK 3 THROUGH 2058)) REMARK 3 SELECTION : CHAIN B REMARK 3 ATOM PAIRS NUMBER : 1749 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6NQI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-JAN-19. REMARK 100 THE DEPOSITION ID IS D_1000239166. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUN-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15227 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : 0.10100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.57 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.6 REMARK 200 DATA REDUNDANCY IN SHELL : 5.70 REMARK 200 R MERGE FOR SHELL (I) : 0.84400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.0 REMARK 200 STARTING MODEL: PDB ENTRY 4JK7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.43 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM TRIS, PH 8.5, 100-150 MM REMARK 280 MAGNESIUM CHLORIDE, 10-12% PEG8000, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 33.75400 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1848 REMARK 465 CYS A 1849 REMARK 465 GLY A 1850 REMARK 465 PRO A 2026 REMARK 465 GLN A 2027 REMARK 465 ARG A 2028 REMARK 465 SER A 2029 REMARK 465 ALA A 2030 REMARK 465 ASP A 2031 REMARK 465 GLU A 2032 REMARK 465 GLU A 2033 REMARK 465 SER A 2034 REMARK 465 ALA A 2035 REMARK 465 GLY A 2036 REMARK 465 SER A 2037 REMARK 465 ALA A 2038 REMARK 465 SER A 2060 REMARK 465 LEU A 2061 REMARK 465 VAL A 2062 REMARK 465 PRO A 2063 REMARK 465 VAL A 2064 REMARK 465 ARG A 2065 REMARK 465 GLY B 1848 REMARK 465 CYS B 1849 REMARK 465 GLY B 1850 REMARK 465 GLY B 1851 REMARK 465 ASP B 1852 REMARK 465 GLN B 1898 REMARK 465 THR B 1899 REMARK 465 ARG B 1900 REMARK 465 ARG B 1901 REMARK 465 PRO B 2026 REMARK 465 GLN B 2027 REMARK 465 ARG B 2028 REMARK 465 SER B 2029 REMARK 465 ALA B 2030 REMARK 465 ASP B 2031 REMARK 465 GLU B 2032 REMARK 465 GLU B 2033 REMARK 465 SER B 2034 REMARK 465 ALA B 2035 REMARK 465 GLY B 2036 REMARK 465 SER B 2037 REMARK 465 ALA B 2038 REMARK 465 THR B 2039 REMARK 465 PRO B 2040 REMARK 465 GLN B 2059 REMARK 465 SER B 2060 REMARK 465 LEU B 2061 REMARK 465 VAL B 2062 REMARK 465 PRO B 2063 REMARK 465 VAL B 2064 REMARK 465 ARG B 2065 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NE2 GLN A 2059 O ILE B 1986 2444 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A1991 -117.23 51.67 REMARK 500 ALA A2016 59.24 -157.33 REMARK 500 LEU A2058 30.40 -85.86 REMARK 500 ALA B1991 -119.40 55.35 REMARK 500 ALA B2016 60.31 -151.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BME A 2101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BME B 2101 DBREF 6NQI A 1848 2065 UNP M1V7K2 M1V7K2_CYAM1 1848 2065 DBREF 6NQI B 1848 2065 UNP M1V7K2 M1V7K2_CYAM1 1848 2065 SEQRES 1 A 218 GLY CYS GLY GLY ASP LEU TRP ARG GLN ARG LEU TRP ILE SEQRES 2 A 218 VAL ASP ASP ARG THR ALA TYR ARG PRO HIS ALA ASN GLY SEQRES 3 A 218 VAL ILE TRP ILE TRP GLU THR SER THR GLY ARG LEU PHE SEQRES 4 A 218 VAL LYS ILE VAL HIS ARG THR THR TRP ALA GLY GLN THR SEQRES 5 A 218 ARG ARG ALA GLN LEU ALA LYS TRP LYS CYS ALA GLU HIS SEQRES 6 A 218 VAL LEU THR MET LEU ARG SER GLN PRO THR GLU GLU LEU SEQRES 7 A 218 PRO ARG GLY ILE VAL LEU ALA GLN THR ALA SER MET ASP SEQRES 8 A 218 PRO LEU LYS THR LEU LEU ALA GLY THR GLU TYR ALA LYS SEQRES 9 A 218 ILE PRO VAL ARG ALA GLY ALA ALA ALA MET PRO LEU GLN SEQRES 10 A 218 ALA LEU MET ALA LEU PRO GLU ILE ARG ASP ARG THR GLN SEQRES 11 A 218 THR ALA ARG SER SER GLU LEU SER ILE TRP SER GLY TYR SEQRES 12 A 218 ALA ASP TRP LEU GLU HIS VAL PRO VAL TRP ILE ALA SER SEQRES 13 A 218 ALA ARG PHE LEU LEU LEU LEU HIS ALA LEU ASP ARG ALA SEQRES 14 A 218 PRO GLU ARG VAL LEU GLN LEU VAL TRP PRO GLN ARG SER SEQRES 15 A 218 ALA ASP GLU GLU SER ALA GLY SER ALA THR PRO TRP LEU SEQRES 16 A 218 TRP PRO ALA LEU PRO GLU THR ASP TRP ARG ARG LEU GLU SEQRES 17 A 218 LEU GLU LEU GLN SER LEU VAL PRO VAL ARG SEQRES 1 B 218 GLY CYS GLY GLY ASP LEU TRP ARG GLN ARG LEU TRP ILE SEQRES 2 B 218 VAL ASP ASP ARG THR ALA TYR ARG PRO HIS ALA ASN GLY SEQRES 3 B 218 VAL ILE TRP ILE TRP GLU THR SER THR GLY ARG LEU PHE SEQRES 4 B 218 VAL LYS ILE VAL HIS ARG THR THR TRP ALA GLY GLN THR SEQRES 5 B 218 ARG ARG ALA GLN LEU ALA LYS TRP LYS CYS ALA GLU HIS SEQRES 6 B 218 VAL LEU THR MET LEU ARG SER GLN PRO THR GLU GLU LEU SEQRES 7 B 218 PRO ARG GLY ILE VAL LEU ALA GLN THR ALA SER MET ASP SEQRES 8 B 218 PRO LEU LYS THR LEU LEU ALA GLY THR GLU TYR ALA LYS SEQRES 9 B 218 ILE PRO VAL ARG ALA GLY ALA ALA ALA MET PRO LEU GLN SEQRES 10 B 218 ALA LEU MET ALA LEU PRO GLU ILE ARG ASP ARG THR GLN SEQRES 11 B 218 THR ALA ARG SER SER GLU LEU SER ILE TRP SER GLY TYR SEQRES 12 B 218 ALA ASP TRP LEU GLU HIS VAL PRO VAL TRP ILE ALA SER SEQRES 13 B 218 ALA ARG PHE LEU LEU LEU LEU HIS ALA LEU ASP ARG ALA SEQRES 14 B 218 PRO GLU ARG VAL LEU GLN LEU VAL TRP PRO GLN ARG SER SEQRES 15 B 218 ALA ASP GLU GLU SER ALA GLY SER ALA THR PRO TRP LEU SEQRES 16 B 218 TRP PRO ALA LEU PRO GLU THR ASP TRP ARG ARG LEU GLU SEQRES 17 B 218 LEU GLU LEU GLN SER LEU VAL PRO VAL ARG HET BME A2101 4 HET BME B2101 4 HETNAM BME BETA-MERCAPTOETHANOL FORMUL 3 BME 2(C2 H6 O S) HELIX 1 AA1 HIS A 1891 ALA A 1896 5 6 HELIX 2 AA2 ARG A 1900 SER A 1919 1 20 HELIX 3 AA3 PRO A 1921 LEU A 1925 5 5 HELIX 4 AA4 GLN A 1933 ALA A 1935 5 3 HELIX 5 AA5 SER A 1936 ALA A 1945 1 10 HELIX 6 AA6 GLY A 1957 MET A 1961 5 5 HELIX 7 AA7 PRO A 1962 ALA A 1968 5 7 HELIX 8 AA8 LEU A 1969 THR A 1978 1 10 HELIX 9 AA9 ASP A 1992 HIS A 1996 5 5 HELIX 10 AB1 PRO A 1998 ALA A 2016 1 19 HELIX 11 AB2 ALA A 2016 VAL A 2024 1 9 HELIX 12 AB3 PRO A 2047 LEU A 2058 1 12 HELIX 13 AB4 HIS B 1891 ALA B 1896 5 6 HELIX 14 AB5 GLN B 1903 SER B 1919 1 17 HELIX 15 AB6 PRO B 1921 LEU B 1925 5 5 HELIX 16 AB7 GLN B 1933 ALA B 1935 5 3 HELIX 17 AB8 SER B 1936 ALA B 1945 1 10 HELIX 18 AB9 PRO B 1962 ALA B 1968 5 7 HELIX 19 AC1 LEU B 1969 THR B 1978 1 10 HELIX 20 AC2 ASP B 1992 HIS B 1996 5 5 HELIX 21 AC3 PRO B 1998 ALA B 2016 1 19 HELIX 22 AC4 ALA B 2016 VAL B 2024 1 9 HELIX 23 AC5 PRO B 2047 LEU B 2058 1 12 SHEET 1 AA1 6 VAL A1954 ARG A1955 0 SHEET 2 AA1 6 GLY A1928 LEU A1931 1 N LEU A1931 O ARG A1955 SHEET 3 AA1 6 LEU A1858 ARG A1868 1 N TRP A1859 O VAL A1930 SHEET 4 AA1 6 ALA A1871 GLU A1879 -1 O VAL A1874 N THR A1865 SHEET 5 AA1 6 ARG A1884 VAL A1890 -1 O ARG A1884 N GLU A1879 SHEET 6 AA1 6 LEU A1984 SER A1988 -1 O TRP A1987 N LEU A1885 SHEET 1 AA2 6 VAL B1954 ALA B1956 0 SHEET 2 AA2 6 GLY B1928 LEU B1931 1 N ILE B1929 O ARG B1955 SHEET 3 AA2 6 LEU B1858 ASP B1862 1 N VAL B1861 O VAL B1930 SHEET 4 AA2 6 GLY B1873 GLU B1879 -1 O TRP B1878 N ILE B1860 SHEET 5 AA2 6 ARG B1884 VAL B1890 -1 O ARG B1884 N GLU B1879 SHEET 6 AA2 6 LEU B1984 SER B1988 -1 O SER B1985 N VAL B1887 LINK SG CYS A1909 S2 BME A2101 1555 1555 2.01 LINK SG CYS B1909 S2 BME B2101 1555 1555 2.01 SITE 1 AC1 7 VAL A1861 ASP A1863 CYS A1909 LEU A1931 SITE 2 AC1 7 ALA A1932 GLN A1933 SER A1936 SITE 1 AC2 14 VAL B1861 ASP B1863 ALA B1905 LYS B1906 SITE 2 AC2 14 TRP B1907 LYS B1908 ALA B1910 GLU B1911 SITE 3 AC2 14 HIS B1912 VAL B1913 LEU B1931 ALA B1932 SITE 4 AC2 14 GLN B1933 SER B1936 CRYST1 56.516 67.508 58.859 90.00 101.64 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017694 0.000000 0.003645 0.00000 SCALE2 0.000000 0.014813 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017346 0.00000