HEADER OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR 22-JAN-19 6NR5 TITLE HUMAN LSD1 IN COMPLEX WITH PHENELZINE SULFATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: BRAF35-HDAC COMPLEX PROTEIN BHC110,FLAVIN-CONTAINING AMINE COMPND 5 OXIDASE DOMAIN-CONTAINING PROTEIN 2; COMPND 6 EC: 1.-.-.-; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KDM1A, AOF2, KDM1, KIAA0601, LSD1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A, COMPLEX, INHIBITOR, KEYWDS 2 OXIDOREDUCTASE, OXIDOREDUCTASE-OXIDOREDUCTASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.H.Y.TAN,W.TU,R.MCCUAIG,T.DONOVAN,S.TSIMBALYUK,J.K.FORWOOD,S.RAO REVDAT 3 13-MAR-24 6NR5 1 REMARK REVDAT 2 08-JAN-20 6NR5 1 REMARK REVDAT 1 17-JUL-19 6NR5 0 JRNL AUTH A.H.Y.TAN,W.TU,R.MCCUAIG,K.HARDY,T.DONOVAN,S.TSIMBALYUK, JRNL AUTH 2 J.K.FORWOOD,S.RAO JRNL TITL LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A REGULATES MACROPHAGE JRNL TITL 2 POLARIZATION AND CHECKPOINT MOLECULES IN THE TUMOR JRNL TITL 3 MICROENVIRONMENT OF TRIPLE-NEGATIVE BREAST CANCER. JRNL REF FRONT IMMUNOL V. 10 1351 2019 JRNL REFN ESSN 1664-3224 JRNL PMID 31249575 JRNL DOI 10.3389/FIMMU.2019.01351 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.14_3260: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.92 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 25974 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.222 REMARK 3 R VALUE (WORKING SET) : 0.220 REMARK 3 FREE R VALUE : 0.273 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.970 REMARK 3 FREE R VALUE TEST SET COUNT : 1290 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.9177 - 6.0181 1.00 2937 153 0.1877 0.2169 REMARK 3 2 6.0181 - 4.7831 1.00 2794 141 0.2065 0.2935 REMARK 3 3 4.7831 - 4.1803 1.00 2752 139 0.1871 0.2695 REMARK 3 4 4.1803 - 3.7989 1.00 2725 138 0.2106 0.2419 REMARK 3 5 3.7989 - 3.5271 1.00 2699 146 0.2387 0.2954 REMARK 3 6 3.5271 - 3.3194 1.00 2710 140 0.2567 0.3156 REMARK 3 7 3.3194 - 3.1534 1.00 2681 150 0.2822 0.3421 REMARK 3 8 3.1534 - 3.0162 1.00 2719 126 0.3122 0.3405 REMARK 3 9 3.0162 - 2.9002 1.00 2667 157 0.3628 0.4299 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.460 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.060 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 5112 REMARK 3 ANGLE : 0.643 6948 REMARK 3 CHIRALITY : 0.046 789 REMARK 3 PLANARITY : 0.004 893 REMARK 3 DIHEDRAL : 19.641 1900 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6NR5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-JAN-19. REMARK 100 THE DEPOSITION ID IS D_1000239278. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-FEB-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26000 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 29.920 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 20.90 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.08 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.04 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.85 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350 95, 0.1M AMMONIUM CITRATE REMARK 280 PH6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 296K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 36.34367 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 72.68733 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 54.51550 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 90.85917 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 18.17183 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 36.34367 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 72.68733 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 90.85917 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 54.51550 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 18.17183 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 TYR A 462 REMARK 465 LYS A 463 REMARK 465 GLU A 464 REMARK 465 ALA A 465 REMARK 465 SER A 466 REMARK 465 GLU A 467 REMARK 465 VAL A 468 REMARK 465 LYS A 469 REMARK 465 PRO A 470 REMARK 465 PRO A 471 REMARK 465 ARG A 472 REMARK 465 ASP A 473 REMARK 465 ILE A 474 REMARK 465 GLY A 783 REMARK 465 PRO A 784 REMARK 465 SER A 785 REMARK 465 ILE A 786 REMARK 465 PRO A 787 REMARK 465 GLY A 788 REMARK 465 ALA A 789 REMARK 465 PRO A 790 REMARK 465 GLN A 791 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 358 CG CD OE1 NE2 REMARK 470 LYS A 359 CD CE NZ REMARK 470 MET A 377 CE REMARK 470 GLU A 387 CD OE1 OE2 REMARK 470 LYS A 404 CE NZ REMARK 470 LYS A 442 CE NZ REMARK 470 LYS A 452 CG CD CE NZ REMARK 470 LYS A 456 CG CD CE NZ REMARK 470 GLN A 460 CG CD OE1 NE2 REMARK 470 GLN A 509 CG CD OE1 NE2 REMARK 470 ARG A 568 CD NE CZ NH1 NH2 REMARK 470 ASN A 569 CG OD1 ND2 REMARK 470 ARG A 668 CD NE CZ NH1 NH2 REMARK 470 ASN A 696 CG OD1 ND2 REMARK 470 LEU A 697 CD1 CD2 REMARK 470 LYS A 699 CD CE NZ REMARK 470 ARG A 750 CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 332 -22.19 -142.48 REMARK 500 GLN A 395 -6.06 -141.93 REMARK 500 SER A 522 -179.93 -65.42 REMARK 500 SER A 545 -8.47 -59.35 REMARK 500 SER A 609 100.22 -163.83 REMARK 500 THR A 610 29.09 -73.74 REMARK 500 ASN A 696 53.02 -114.15 REMARK 500 PRO A 701 72.99 -69.07 REMARK 500 ALA A 757 -51.77 -135.93 REMARK 500 SER A 760 -86.91 -90.64 REMARK 500 TYR A 807 47.82 -142.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue KXM A 901 DBREF 6NR5 A 173 830 UNP O60341 KDM1A_HUMAN 173 830 SEQRES 1 A 658 GLY VAL GLU GLY ALA ALA PHE GLN SER ARG LEU PRO HIS SEQRES 2 A 658 ASP ARG MET THR SER GLN GLU ALA ALA CYS PHE PRO ASP SEQRES 3 A 658 ILE ILE SER GLY PRO GLN GLN THR GLN LYS VAL PHE LEU SEQRES 4 A 658 PHE ILE ARG ASN ARG THR LEU GLN LEU TRP LEU ASP ASN SEQRES 5 A 658 PRO LYS ILE GLN LEU THR PHE GLU ALA THR LEU GLN GLN SEQRES 6 A 658 LEU GLU ALA PRO TYR ASN SER ASP THR VAL LEU VAL HIS SEQRES 7 A 658 ARG VAL HIS SER TYR LEU GLU ARG HIS GLY LEU ILE ASN SEQRES 8 A 658 PHE GLY ILE TYR LYS ARG ILE LYS PRO LEU PRO THR LYS SEQRES 9 A 658 LYS THR GLY LYS VAL ILE ILE ILE GLY SER GLY VAL SER SEQRES 10 A 658 GLY LEU ALA ALA ALA ARG GLN LEU GLN SER PHE GLY MET SEQRES 11 A 658 ASP VAL THR LEU LEU GLU ALA ARG ASP ARG VAL GLY GLY SEQRES 12 A 658 ARG VAL ALA THR PHE ARG LYS GLY ASN TYR VAL ALA ASP SEQRES 13 A 658 LEU GLY ALA MET VAL VAL THR GLY LEU GLY GLY ASN PRO SEQRES 14 A 658 MET ALA VAL VAL SER LYS GLN VAL ASN MET GLU LEU ALA SEQRES 15 A 658 LYS ILE LYS GLN LYS CYS PRO LEU TYR GLU ALA ASN GLY SEQRES 16 A 658 GLN ALA VAL PRO LYS GLU LYS ASP GLU MET VAL GLU GLN SEQRES 17 A 658 GLU PHE ASN ARG LEU LEU GLU ALA THR SER TYR LEU SER SEQRES 18 A 658 HIS GLN LEU ASP PHE ASN VAL LEU ASN ASN LYS PRO VAL SEQRES 19 A 658 SER LEU GLY GLN ALA LEU GLU VAL VAL ILE GLN LEU GLN SEQRES 20 A 658 GLU LYS HIS VAL LYS ASP GLU GLN ILE GLU HIS TRP LYS SEQRES 21 A 658 LYS ILE VAL LYS THR GLN GLU GLU LEU LYS GLU LEU LEU SEQRES 22 A 658 ASN LYS MET VAL ASN LEU LYS GLU LYS ILE LYS GLU LEU SEQRES 23 A 658 HIS GLN GLN TYR LYS GLU ALA SER GLU VAL LYS PRO PRO SEQRES 24 A 658 ARG ASP ILE THR ALA GLU PHE LEU VAL LYS SER LYS HIS SEQRES 25 A 658 ARG ASP LEU THR ALA LEU CYS LYS GLU TYR ASP GLU LEU SEQRES 26 A 658 ALA GLU THR GLN GLY LYS LEU GLU GLU LYS LEU GLN GLU SEQRES 27 A 658 LEU GLU ALA ASN PRO PRO SER ASP VAL TYR LEU SER SER SEQRES 28 A 658 ARG ASP ARG GLN ILE LEU ASP TRP HIS PHE ALA ASN LEU SEQRES 29 A 658 GLU PHE ALA ASN ALA THR PRO LEU SER THR LEU SER LEU SEQRES 30 A 658 LYS HIS TRP ASP GLN ASP ASP ASP PHE GLU PHE THR GLY SEQRES 31 A 658 SER HIS LEU THR VAL ARG ASN GLY TYR SER CYS VAL PRO SEQRES 32 A 658 VAL ALA LEU ALA GLU GLY LEU ASP ILE LYS LEU ASN THR SEQRES 33 A 658 ALA VAL ARG GLN VAL ARG TYR THR ALA SER GLY CYS GLU SEQRES 34 A 658 VAL ILE ALA VAL ASN THR ARG SER THR SER GLN THR PHE SEQRES 35 A 658 ILE TYR LYS CYS ASP ALA VAL LEU CYS THR LEU PRO LEU SEQRES 36 A 658 GLY VAL LEU LYS GLN GLN PRO PRO ALA VAL GLN PHE VAL SEQRES 37 A 658 PRO PRO LEU PRO GLU TRP LYS THR SER ALA VAL GLN ARG SEQRES 38 A 658 MET GLY PHE GLY ASN LEU ASN LYS VAL VAL LEU CYS PHE SEQRES 39 A 658 ASP ARG VAL PHE TRP ASP PRO SER VAL ASN LEU PHE GLY SEQRES 40 A 658 HIS VAL GLY SER THR THR ALA SER ARG GLY GLU LEU PHE SEQRES 41 A 658 LEU PHE TRP ASN LEU TYR LYS ALA PRO ILE LEU LEU ALA SEQRES 42 A 658 LEU VAL ALA GLY GLU ALA ALA GLY ILE MET GLU ASN ILE SEQRES 43 A 658 SER ASP ASP VAL ILE VAL GLY ARG CYS LEU ALA ILE LEU SEQRES 44 A 658 LYS GLY ILE PHE GLY SER SER ALA VAL PRO GLN PRO LYS SEQRES 45 A 658 GLU THR VAL VAL SER ARG TRP ARG ALA ASP PRO TRP ALA SEQRES 46 A 658 ARG GLY SER TYR SER TYR VAL ALA ALA GLY SER SER GLY SEQRES 47 A 658 ASN ASP TYR ASP LEU MET ALA GLN PRO ILE THR PRO GLY SEQRES 48 A 658 PRO SER ILE PRO GLY ALA PRO GLN PRO ILE PRO ARG LEU SEQRES 49 A 658 PHE PHE ALA GLY GLU HIS THR ILE ARG ASN TYR PRO ALA SEQRES 50 A 658 THR VAL HIS GLY ALA LEU LEU SER GLY LEU ARG GLU ALA SEQRES 51 A 658 GLY ARG ILE ALA ASP GLN PHE LEU HET KXM A 901 61 HETNAM KXM [(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3,4- HETNAM 2 KXM DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL (2R,3R,4R)-5- HETNAM 3 KXM [(4AR)-7,8-DIMETHYL-2,4-DIOXO-5-(2-PHENYLETHYL)-3,4, HETNAM 4 KXM 4A,5-TETRAHYDROBENZO[G]PTERIDIN-10(2H)-YL]-2,3,4- HETNAM 5 KXM TRIHYDROXYPENTYL DIHYDROGEN DIPHOSPHATE (NON-PREFERRED HETNAM 6 KXM NAME) FORMUL 2 KXM C35 H43 N9 O15 P2 HELIX 1 AA1 GLY A 173 SER A 181 1 9 HELIX 2 AA2 THR A 189 PHE A 196 1 8 HELIX 3 AA3 PHE A 196 SER A 201 1 6 HELIX 4 AA4 PRO A 203 ASN A 224 1 22 HELIX 5 AA5 THR A 230 LEU A 238 1 9 HELIX 6 AA6 ASP A 245 HIS A 259 1 15 HELIX 7 AA7 GLY A 287 PHE A 300 1 14 HELIX 8 AA8 ASN A 340 ASN A 350 1 11 HELIX 9 AA9 PRO A 371 ASP A 397 1 27 HELIX 10 AB1 SER A 407 GLN A 461 1 55 HELIX 11 AB2 ALA A 476 ASN A 514 1 39 HELIX 12 AB3 SER A 522 ALA A 541 1 20 HELIX 13 AB4 PRO A 543 LEU A 547 5 5 HELIX 14 AB5 ASP A 553 GLU A 559 5 7 HELIX 15 AB6 GLY A 570 CYS A 573 5 4 HELIX 16 AB7 VAL A 574 GLU A 580 1 7 HELIX 17 AB8 PRO A 626 LYS A 631 1 6 HELIX 18 AB9 PRO A 644 MET A 654 1 11 HELIX 19 AC1 ALA A 711 GLU A 716 1 6 HELIX 20 AC2 SER A 719 GLY A 736 1 18 HELIX 21 AC3 GLY A 770 GLN A 778 1 9 HELIX 22 AC4 GLY A 800 ILE A 804 5 5 HELIX 23 AC5 THR A 810 LEU A 830 1 21 SHEET 1 AA1 5 ILE A 584 LYS A 585 0 SHEET 2 AA1 5 ASP A 303 LEU A 307 1 N LEU A 306 O LYS A 585 SHEET 3 AA1 5 LYS A 280 ILE A 284 1 N ILE A 283 O LEU A 307 SHEET 4 AA1 5 ALA A 620 CYS A 623 1 O LEU A 622 N ILE A 284 SHEET 5 AA1 5 LEU A 796 PHE A 798 1 O PHE A 797 N CYS A 623 SHEET 1 AA2 2 THR A 319 LYS A 322 0 SHEET 2 AA2 2 TYR A 325 ASP A 328 -1 O ALA A 327 N PHE A 320 SHEET 1 AA3 3 VAL A 333 VAL A 334 0 SHEET 2 AA3 3 LEU A 565 VAL A 567 -1 O LEU A 565 N VAL A 334 SHEET 3 AA3 3 LEU A 353 LYS A 355 -1 N ALA A 354 O THR A 566 SHEET 1 AA4 6 LEU A 362 TYR A 363 0 SHEET 2 AA4 6 LEU A 677 HIS A 680 1 O GLY A 679 N TYR A 363 SHEET 3 AA4 6 GLU A 690 TRP A 695 -1 O PHE A 692 N HIS A 680 SHEET 4 AA4 6 ILE A 702 VAL A 707 -1 O LEU A 704 N TRP A 695 SHEET 5 AA4 6 ASN A 660 CYS A 665 -1 N VAL A 662 O ALA A 705 SHEET 6 AA4 6 GLU A 745 VAL A 748 -1 O GLU A 745 N CYS A 665 SHEET 1 AA5 4 THR A 613 CYS A 618 0 SHEET 2 AA5 4 GLY A 599 ASN A 606 -1 N VAL A 602 O TYR A 616 SHEET 3 AA5 4 THR A 588 THR A 596 -1 N ARG A 594 O GLU A 601 SHEET 4 AA5 4 GLN A 638 VAL A 640 1 O VAL A 640 N VAL A 593 SHEET 1 AA6 2 GLY A 655 PHE A 656 0 SHEET 2 AA6 2 SER A 762 TYR A 763 -1 O TYR A 763 N GLY A 655 CISPEP 1 VAL A 640 PRO A 641 0 -1.60 SITE 1 AC1 29 GLY A 285 GLY A 287 VAL A 288 SER A 289 SITE 2 AC1 29 LEU A 307 GLU A 308 ALA A 309 ARG A 310 SITE 3 AC1 29 GLY A 314 GLY A 315 ARG A 316 LEU A 329 SITE 4 AC1 29 GLY A 330 ALA A 331 MET A 332 VAL A 333 SITE 5 AC1 29 VAL A 590 THR A 624 LEU A 625 PRO A 626 SITE 6 AC1 29 LEU A 659 TRP A 756 SER A 760 GLY A 800 SITE 7 AC1 29 GLU A 801 ALA A 809 THR A 810 VAL A 811 SITE 8 AC1 29 ALA A 814 CRYST1 189.361 189.361 109.031 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005281 0.003049 0.000000 0.00000 SCALE2 0.000000 0.006098 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009172 0.00000