HEADER OXIDOREDUCTASE 01-FEB-19 6NUP TITLE STRUCTURE OF THIOREDOXIN (TRXA) FROM RICKETTSIA PROWAZEKII STR. MADRID TITLE 2 E. COMPND MOL_ID: 1; COMPND 2 MOLECULE: THIOREDOXIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: TRX; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RICKETTSIA PROWAZEKII (STRAIN MADRID E); SOURCE 3 ORGANISM_TAXID: 272947; SOURCE 4 STRAIN: MADRID E; SOURCE 5 GENE: TRXA, RP002; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: RIPRA.00029.A.A1 KEYWDS SSGCID, STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR KEYWDS 2 INFECTIOUS DISEASE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 2 03-APR-24 6NUP 1 REMARK REVDAT 1 20-FEB-19 6NUP 0 JRNL AUTH J.ABENDROTH,G.W.BUCHKO,D.R.DAVIES,D.D.LORIMER,P.S.HORANYI, JRNL AUTH 2 T.E.EDWARDS JRNL TITL STRUCTURE OF THIOREDOXIN (TRXA) FROM RICKETTSIA PROWAZEKII JRNL TITL 2 STR. MADRID E. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (DEV_3374) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.28 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 12335 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.163 REMARK 3 FREE R VALUE : 0.206 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.170 REMARK 3 FREE R VALUE TEST SET COUNT : 1255 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.2904 - 3.3277 1.00 1356 131 0.1510 0.2078 REMARK 3 2 3.3277 - 2.6416 1.00 1250 156 0.1556 0.1864 REMARK 3 3 2.6416 - 2.3077 1.00 1242 149 0.1612 0.1798 REMARK 3 4 2.3077 - 2.0967 1.00 1220 145 0.1555 0.2028 REMARK 3 5 2.0967 - 1.9465 1.00 1241 133 0.1613 0.2090 REMARK 3 6 1.9465 - 1.8317 1.00 1210 149 0.1805 0.2167 REMARK 3 7 1.8317 - 1.7400 1.00 1207 139 0.1851 0.2287 REMARK 3 8 1.7400 - 1.6642 0.99 1232 113 0.1888 0.2619 REMARK 3 9 1.6642 - 1.6002 0.93 1122 140 0.2046 0.2713 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.930 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.54 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.65 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 961 REMARK 3 ANGLE : 0.978 1314 REMARK 3 CHIRALITY : 0.057 150 REMARK 3 PLANARITY : 0.006 170 REMARK 3 DIHEDRAL : 12.507 615 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID -7:-3 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.212 -26.474 3.372 REMARK 3 T TENSOR REMARK 3 T11: 0.2368 T22: 0.2994 REMARK 3 T33: 0.2198 T12: -0.0198 REMARK 3 T13: 0.0100 T23: -0.0341 REMARK 3 L TENSOR REMARK 3 L11: 4.8359 L22: 9.4365 REMARK 3 L33: 2.1244 L12: 6.7285 REMARK 3 L13: 2.6004 L23: 3.3919 REMARK 3 S TENSOR REMARK 3 S11: 0.0454 S12: 0.6872 S13: 0.1062 REMARK 3 S21: -0.2666 S22: 0.1380 S23: -0.1402 REMARK 3 S31: -0.6350 S32: -0.1329 S33: -0.2198 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID -2:2 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.517 -22.790 11.948 REMARK 3 T TENSOR REMARK 3 T11: 0.3182 T22: 0.4171 REMARK 3 T33: 0.6597 T12: -0.0891 REMARK 3 T13: -0.1684 T23: 0.0877 REMARK 3 L TENSOR REMARK 3 L11: 5.1096 L22: 3.7516 REMARK 3 L33: 2.6924 L12: 4.2084 REMARK 3 L13: 3.2101 L23: 2.2048 REMARK 3 S TENSOR REMARK 3 S11: 0.6124 S12: -1.2414 S13: -1.5249 REMARK 3 S21: 0.3391 S22: -0.3684 S23: -1.4794 REMARK 3 S31: 0.4530 S32: -0.0041 S33: -0.3266 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 3:19 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.988 -17.588 15.178 REMARK 3 T TENSOR REMARK 3 T11: 0.0816 T22: 0.0483 REMARK 3 T33: 0.0861 T12: 0.0059 REMARK 3 T13: 0.0067 T23: -0.0217 REMARK 3 L TENSOR REMARK 3 L11: 2.8439 L22: 3.3711 REMARK 3 L33: 4.2634 L12: 0.2466 REMARK 3 L13: -0.4039 L23: -1.5792 REMARK 3 S TENSOR REMARK 3 S11: -0.0536 S12: 0.1252 S13: -0.0922 REMARK 3 S21: -0.1496 S22: -0.0838 S23: -0.1824 REMARK 3 S31: 0.1338 S32: 0.2047 S33: 0.1494 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN A AND RESID 20:30 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.391 -12.718 19.821 REMARK 3 T TENSOR REMARK 3 T11: 0.0642 T22: 0.0704 REMARK 3 T33: 0.0686 T12: -0.0007 REMARK 3 T13: 0.0013 T23: -0.0055 REMARK 3 L TENSOR REMARK 3 L11: 6.2601 L22: 1.7219 REMARK 3 L33: 8.9962 L12: -1.5078 REMARK 3 L13: -6.6423 L23: 1.4035 REMARK 3 S TENSOR REMARK 3 S11: -0.0771 S12: 0.0703 S13: 0.0259 REMARK 3 S21: 0.1359 S22: 0.1091 S23: 0.0642 REMARK 3 S31: 0.1833 S32: -0.2689 S33: -0.0334 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN A AND RESID 31:46 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.512 -14.242 13.498 REMARK 3 T TENSOR REMARK 3 T11: 0.0905 T22: 0.1547 REMARK 3 T33: 0.1588 T12: -0.0318 REMARK 3 T13: 0.0094 T23: -0.0174 REMARK 3 L TENSOR REMARK 3 L11: 6.4205 L22: 8.1919 REMARK 3 L33: 7.8463 L12: -3.1502 REMARK 3 L13: -4.3911 L23: 6.4837 REMARK 3 S TENSOR REMARK 3 S11: -0.1183 S12: 0.4686 S13: -0.5335 REMARK 3 S21: -0.2907 S22: -0.0372 S23: 0.0573 REMARK 3 S31: -0.1786 S32: -0.2175 S33: 0.1657 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: ( CHAIN A AND RESID 47:57 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.494 -16.308 10.080 REMARK 3 T TENSOR REMARK 3 T11: 0.0709 T22: 0.1065 REMARK 3 T33: 0.1019 T12: -0.0287 REMARK 3 T13: 0.0168 T23: -0.0319 REMARK 3 L TENSOR REMARK 3 L11: 3.4859 L22: 3.7053 REMARK 3 L33: 1.9820 L12: -0.4636 REMARK 3 L13: -0.9990 L23: 0.3066 REMARK 3 S TENSOR REMARK 3 S11: -0.0227 S12: 0.4329 S13: -0.0548 REMARK 3 S21: -0.3050 S22: -0.0423 S23: -0.0569 REMARK 3 S31: 0.1293 S32: -0.2067 S33: 0.0637 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: ( CHAIN A AND RESID 58:67 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.761 -12.451 26.281 REMARK 3 T TENSOR REMARK 3 T11: 0.1283 T22: 0.0653 REMARK 3 T33: 0.0755 T12: 0.0089 REMARK 3 T13: -0.0039 T23: -0.0149 REMARK 3 L TENSOR REMARK 3 L11: 7.5053 L22: 2.2801 REMARK 3 L33: 4.1078 L12: 3.6034 REMARK 3 L13: -3.0938 L23: -2.6943 REMARK 3 S TENSOR REMARK 3 S11: -0.0287 S12: -0.0772 S13: 0.0399 REMARK 3 S21: 0.3132 S22: 0.0118 S23: 0.0166 REMARK 3 S31: 0.0247 S32: 0.0168 S33: 0.0573 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: ( CHAIN A AND RESID 68:74 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.284 -4.597 23.181 REMARK 3 T TENSOR REMARK 3 T11: 0.1114 T22: 0.0846 REMARK 3 T33: 0.1002 T12: -0.0115 REMARK 3 T13: -0.0122 T23: -0.0159 REMARK 3 L TENSOR REMARK 3 L11: 5.5979 L22: 1.9409 REMARK 3 L33: 3.0791 L12: -0.0534 REMARK 3 L13: -1.8585 L23: -0.3467 REMARK 3 S TENSOR REMARK 3 S11: 0.1268 S12: -0.2582 S13: 0.3307 REMARK 3 S21: 0.1045 S22: 0.0119 S23: -0.0984 REMARK 3 S31: -0.1351 S32: 0.1087 S33: -0.0783 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: ( CHAIN A AND RESID 75:82 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.236 -7.705 12.407 REMARK 3 T TENSOR REMARK 3 T11: 0.0784 T22: 0.0815 REMARK 3 T33: 0.0805 T12: 0.0001 REMARK 3 T13: 0.0081 T23: 0.0028 REMARK 3 L TENSOR REMARK 3 L11: 2.4690 L22: 3.1378 REMARK 3 L33: 4.4159 L12: -0.3640 REMARK 3 L13: -3.2094 L23: 0.0759 REMARK 3 S TENSOR REMARK 3 S11: -0.0085 S12: 0.3096 S13: 0.1042 REMARK 3 S21: -0.1312 S22: -0.0122 S23: -0.2721 REMARK 3 S31: 0.0034 S32: -0.0867 S33: -0.0075 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: ( CHAIN A AND RESID 83:93 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.241 -3.762 13.178 REMARK 3 T TENSOR REMARK 3 T11: 0.0824 T22: 0.0575 REMARK 3 T33: 0.0431 T12: -0.0044 REMARK 3 T13: -0.0055 T23: 0.0177 REMARK 3 L TENSOR REMARK 3 L11: 4.5296 L22: 4.3835 REMARK 3 L33: 3.5142 L12: -1.2993 REMARK 3 L13: 0.6512 L23: 0.2971 REMARK 3 S TENSOR REMARK 3 S11: -0.0060 S12: 0.2964 S13: 0.2463 REMARK 3 S21: -0.1347 S22: 0.0083 S23: 0.0205 REMARK 3 S31: 0.0757 S32: -0.2416 S33: 0.0260 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: ( CHAIN A AND RESID 94:105 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.917 -5.638 4.518 REMARK 3 T TENSOR REMARK 3 T11: 0.1030 T22: 0.1707 REMARK 3 T33: 0.1291 T12: 0.0086 REMARK 3 T13: -0.0278 T23: 0.0238 REMARK 3 L TENSOR REMARK 3 L11: 2.7716 L22: 6.4655 REMARK 3 L33: 7.8122 L12: 3.0695 REMARK 3 L13: 1.3724 L23: 1.6799 REMARK 3 S TENSOR REMARK 3 S11: 0.0507 S12: 0.5433 S13: -0.0499 REMARK 3 S21: -0.1986 S22: -0.0009 S23: -0.0992 REMARK 3 S31: 0.1838 S32: -0.0685 S33: 0.0016 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6NUP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-FEB-19. REMARK 100 THE DEPOSITION ID IS D_1000239471. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JAN-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E+ SUPERBRIGHT REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : RIGAKU VARIMAX REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944+ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12337 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 36.281 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 15.60 REMARK 200 R MERGE (I) : 0.06400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 27.9900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.5 REMARK 200 DATA REDUNDANCY IN SHELL : 5.19 REMARK 200 R MERGE FOR SHELL (I) : 0.40600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.660 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MORDA REMARK 200 STARTING MODEL: PDB ENTRY 2YJ7A AS PER MORDA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 29.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.73 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: RIGAKU REAGENTS PRECIPITANT SYNERGY REMARK 280 SCREEN, CONDITION #64: 25% PEG 3350, 15% PROPANOL-2, 100MM REMARK 280 AMMONIUM-CITRATE TRIBASIC / CITRIC ACID PH 4.5: REMARK 280 RIPRA.00029.A.A1.PB00094 AT 2MG/ML: CRYO: DIRECT: PUCK UWK6-15, REMARK 280 PH 6.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 16.37000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 30.46500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 22.58000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 30.46500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 16.37000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 22.58000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -28 REMARK 465 PRO A -27 REMARK 465 GLY A -26 REMARK 465 SER A -25 REMARK 465 MET A -24 REMARK 465 SER A -23 REMARK 465 CYS A -22 REMARK 465 TYR A -21 REMARK 465 ASN A -20 REMARK 465 GLU A -19 REMARK 465 ILE A -18 REMARK 465 THR A -17 REMARK 465 THR A -16 REMARK 465 LEU A -15 REMARK 465 LEU A -14 REMARK 465 GLU A -13 REMARK 465 PHE A -12 REMARK 465 ASP A -11 REMARK 465 SER A -10 REMARK 465 ASN A -9 REMARK 465 ASP A -8 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A -3 CG CD OE1 NE2 REMARK 470 ILE A -1 CG1 CG2 CD1 REMARK 470 GLU A 42 CG CD OE1 OE2 REMARK 470 LYS A 45 CG CD CE NZ REMARK 470 GLN A 48 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A 30 CA - CB - SG ANGL. DEV. = 7.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 14 -61.32 -103.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CIT A 200 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CIT A 201 DBREF 6NUP A 1 105 UNP Q9ZEE0 THIO_RICPR 1 105 SEQADV 6NUP GLY A -28 UNP Q9ZEE0 EXPRESSION TAG SEQADV 6NUP PRO A -27 UNP Q9ZEE0 EXPRESSION TAG SEQADV 6NUP GLY A -26 UNP Q9ZEE0 EXPRESSION TAG SEQADV 6NUP SER A -25 UNP Q9ZEE0 EXPRESSION TAG SEQADV 6NUP MET A -24 UNP Q9ZEE0 EXPRESSION TAG SEQADV 6NUP SER A -23 UNP Q9ZEE0 EXPRESSION TAG SEQADV 6NUP CYS A -22 UNP Q9ZEE0 EXPRESSION TAG SEQADV 6NUP TYR A -21 UNP Q9ZEE0 EXPRESSION TAG SEQADV 6NUP ASN A -20 UNP Q9ZEE0 EXPRESSION TAG SEQADV 6NUP GLU A -19 UNP Q9ZEE0 EXPRESSION TAG SEQADV 6NUP ILE A -18 UNP Q9ZEE0 EXPRESSION TAG SEQADV 6NUP THR A -17 UNP Q9ZEE0 EXPRESSION TAG SEQADV 6NUP THR A -16 UNP Q9ZEE0 EXPRESSION TAG SEQADV 6NUP LEU A -15 UNP Q9ZEE0 EXPRESSION TAG SEQADV 6NUP LEU A -14 UNP Q9ZEE0 EXPRESSION TAG SEQADV 6NUP GLU A -13 UNP Q9ZEE0 EXPRESSION TAG SEQADV 6NUP PHE A -12 UNP Q9ZEE0 EXPRESSION TAG SEQADV 6NUP ASP A -11 UNP Q9ZEE0 EXPRESSION TAG SEQADV 6NUP SER A -10 UNP Q9ZEE0 EXPRESSION TAG SEQADV 6NUP ASN A -9 UNP Q9ZEE0 EXPRESSION TAG SEQADV 6NUP ASP A -8 UNP Q9ZEE0 EXPRESSION TAG SEQADV 6NUP ILE A -7 UNP Q9ZEE0 EXPRESSION TAG SEQADV 6NUP ASN A -6 UNP Q9ZEE0 EXPRESSION TAG SEQADV 6NUP THR A -5 UNP Q9ZEE0 EXPRESSION TAG SEQADV 6NUP THR A -4 UNP Q9ZEE0 EXPRESSION TAG SEQADV 6NUP GLN A -3 UNP Q9ZEE0 EXPRESSION TAG SEQADV 6NUP ARG A -2 UNP Q9ZEE0 EXPRESSION TAG SEQADV 6NUP ILE A -1 UNP Q9ZEE0 EXPRESSION TAG SEQADV 6NUP ASN A 0 UNP Q9ZEE0 EXPRESSION TAG SEQRES 1 A 134 GLY PRO GLY SER MET SER CYS TYR ASN GLU ILE THR THR SEQRES 2 A 134 LEU LEU GLU PHE ASP SER ASN ASP ILE ASN THR THR GLN SEQRES 3 A 134 ARG ILE ASN MET VAL ASN ASN VAL THR ASP SER SER PHE SEQRES 4 A 134 LYS ASN GLU VAL LEU GLU SER ASP LEU PRO VAL MET VAL SEQRES 5 A 134 ASP PHE TRP ALA GLU TRP CYS GLY PRO CYS LYS MET LEU SEQRES 6 A 134 ILE PRO ILE ILE ASP GLU ILE SER LYS GLU LEU GLN ASP SEQRES 7 A 134 LYS VAL LYS VAL LEU LYS MET ASN ILE ASP GLU ASN PRO SEQRES 8 A 134 LYS THR PRO SER GLU TYR GLY ILE ARG SER ILE PRO THR SEQRES 9 A 134 ILE MET LEU PHE LYS ASN GLY GLU GLN LYS ASP THR LYS SEQRES 10 A 134 ILE GLY LEU GLN GLN LYS ASN SER LEU LEU ASP TRP ILE SEQRES 11 A 134 ASN LYS SER ILE HET CIT A 200 13 HET CIT A 201 13 HETNAM CIT CITRIC ACID FORMUL 2 CIT 2(C6 H8 O7) FORMUL 4 HOH *103(H2 O) HELIX 1 AA1 SER A 9 VAL A 14 1 6 HELIX 2 AA2 CYS A 30 LEU A 47 1 18 HELIX 3 AA3 PRO A 62 TYR A 68 1 7 HELIX 4 AA4 GLN A 93 ILE A 105 1 13 SHEET 1 AA1 5 ASN A 3 ASN A 4 0 SHEET 2 AA1 5 LYS A 52 ASN A 57 1 O LYS A 55 N ASN A 3 SHEET 3 AA1 5 VAL A 21 TRP A 26 1 N MET A 22 O LYS A 52 SHEET 4 AA1 5 THR A 75 LYS A 80 -1 O MET A 77 N VAL A 23 SHEET 5 AA1 5 GLU A 83 ILE A 89 -1 O LYS A 85 N LEU A 78 SSBOND 1 CYS A 30 CYS A 33 1555 1555 2.05 CISPEP 1 ILE A 73 PRO A 74 0 -4.23 SITE 1 AC1 13 ARG A -2 THR A -4 GLN A -3 SER A 17 SITE 2 AC1 13 ASP A 18 LEU A 19 LYS A 52 ARG A 71 SITE 3 AC1 13 SER A 72 ILE A 89 HOH A 305 HOH A 373 SITE 4 AC1 13 HOH A 375 SITE 1 AC2 11 ASN A 0 MET A 1 LYS A 11 ASN A 12 SITE 2 AC2 11 GLU A 16 ILE A 37 ASP A 41 GLN A 92 SITE 3 AC2 11 HOH A 336 HOH A 340 HOH A 370 CRYST1 32.740 45.160 60.930 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.030544 0.000000 0.000000 0.00000 SCALE2 0.000000 0.022143 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016412 0.00000