data_6NYD # _entry.id 6NYD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6NYD pdb_00006nyd 10.2210/pdb6nyd/pdb WWPDB D_1000239665 ? ? # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 6NYA PDB . unspecified 6NYO PDB . # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6NYD _pdbx_database_status.recvd_initial_deposition_date 2019-02-11 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Olsen, S.K.' 1 ? 'Williams, K.M.' 2 ? 'Atkison, J.H.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 10 _citation.language ? _citation.page_first 3296 _citation.page_last 3296 _citation.title 'Structural insights into E1 recognition and the ubiquitin-conjugating activity of the E2 enzyme Cdc34.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-019-11061-8 _citation.pdbx_database_id_PubMed 31341161 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Williams, K.M.' 1 ? primary 'Qie, S.' 2 ? primary 'Atkison, J.H.' 3 ? primary 'Salazar-Arango, S.' 4 ? primary 'Alan Diehl, J.' 5 0000-0001-9854-5049 primary 'Olsen, S.K.' 6 0000-0002-1265-7101 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 6NYD _cell.details ? _cell.formula_units_Z ? _cell.length_a 40.084 _cell.length_a_esd ? _cell.length_b 49.022 _cell.length_b_esd ? _cell.length_c 103.684 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6NYD _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ubiquitin-conjugating enzyme E2-34 kDa' 22427.152 1 2.3.2.23 ? 'residues 3-195' ? 2 non-polymer syn 'ZINC ION' 65.409 4 ? ? ? ? 3 non-polymer syn 'ACETATE ION' 59.044 3 ? ? ? ? 4 water nat water 18.015 103 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Cell division control protein 34,E2 ubiquitin-conjugating enzyme 3,E3 ubiquitin ligase complex SCF subunit CDC34,Ubiquitin carrier protein,Ubiquitin-protein ligase ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GAMASRKSTASSLLLRQYRELTDPKKAIPSFHIELEDDSNIFTWNIGVMVLNEDSIYHGGFFKAQMRFPEDFPFSPPQFR FTPAIYHPNVYRDGRLCISILHQSGDPMTDEPDAETWSPVQTVESVLISIVSLLEDPNINSPANVDAAVDYRKNPEQYKQ RVKMEVERSKQDIPKGFIMPTSESAYISQSKLDEPES ; _entity_poly.pdbx_seq_one_letter_code_can ;GAMASRKSTASSLLLRQYRELTDPKKAIPSFHIELEDDSNIFTWNIGVMVLNEDSIYHGGFFKAQMRFPEDFPFSPPQFR FTPAIYHPNVYRDGRLCISILHQSGDPMTDEPDAETWSPVQTVESVLISIVSLLEDPNINSPANVDAAVDYRKNPEQYKQ RVKMEVERSKQDIPKGFIMPTSESAYISQSKLDEPES ; _entity_poly.pdbx_strand_id C _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ALA n 1 3 MET n 1 4 ALA n 1 5 SER n 1 6 ARG n 1 7 LYS n 1 8 SER n 1 9 THR n 1 10 ALA n 1 11 SER n 1 12 SER n 1 13 LEU n 1 14 LEU n 1 15 LEU n 1 16 ARG n 1 17 GLN n 1 18 TYR n 1 19 ARG n 1 20 GLU n 1 21 LEU n 1 22 THR n 1 23 ASP n 1 24 PRO n 1 25 LYS n 1 26 LYS n 1 27 ALA n 1 28 ILE n 1 29 PRO n 1 30 SER n 1 31 PHE n 1 32 HIS n 1 33 ILE n 1 34 GLU n 1 35 LEU n 1 36 GLU n 1 37 ASP n 1 38 ASP n 1 39 SER n 1 40 ASN n 1 41 ILE n 1 42 PHE n 1 43 THR n 1 44 TRP n 1 45 ASN n 1 46 ILE n 1 47 GLY n 1 48 VAL n 1 49 MET n 1 50 VAL n 1 51 LEU n 1 52 ASN n 1 53 GLU n 1 54 ASP n 1 55 SER n 1 56 ILE n 1 57 TYR n 1 58 HIS n 1 59 GLY n 1 60 GLY n 1 61 PHE n 1 62 PHE n 1 63 LYS n 1 64 ALA n 1 65 GLN n 1 66 MET n 1 67 ARG n 1 68 PHE n 1 69 PRO n 1 70 GLU n 1 71 ASP n 1 72 PHE n 1 73 PRO n 1 74 PHE n 1 75 SER n 1 76 PRO n 1 77 PRO n 1 78 GLN n 1 79 PHE n 1 80 ARG n 1 81 PHE n 1 82 THR n 1 83 PRO n 1 84 ALA n 1 85 ILE n 1 86 TYR n 1 87 HIS n 1 88 PRO n 1 89 ASN n 1 90 VAL n 1 91 TYR n 1 92 ARG n 1 93 ASP n 1 94 GLY n 1 95 ARG n 1 96 LEU n 1 97 CYS n 1 98 ILE n 1 99 SER n 1 100 ILE n 1 101 LEU n 1 102 HIS n 1 103 GLN n 1 104 SER n 1 105 GLY n 1 106 ASP n 1 107 PRO n 1 108 MET n 1 109 THR n 1 110 ASP n 1 111 GLU n 1 112 PRO n 1 113 ASP n 1 114 ALA n 1 115 GLU n 1 116 THR n 1 117 TRP n 1 118 SER n 1 119 PRO n 1 120 VAL n 1 121 GLN n 1 122 THR n 1 123 VAL n 1 124 GLU n 1 125 SER n 1 126 VAL n 1 127 LEU n 1 128 ILE n 1 129 SER n 1 130 ILE n 1 131 VAL n 1 132 SER n 1 133 LEU n 1 134 LEU n 1 135 GLU n 1 136 ASP n 1 137 PRO n 1 138 ASN n 1 139 ILE n 1 140 ASN n 1 141 SER n 1 142 PRO n 1 143 ALA n 1 144 ASN n 1 145 VAL n 1 146 ASP n 1 147 ALA n 1 148 ALA n 1 149 VAL n 1 150 ASP n 1 151 TYR n 1 152 ARG n 1 153 LYS n 1 154 ASN n 1 155 PRO n 1 156 GLU n 1 157 GLN n 1 158 TYR n 1 159 LYS n 1 160 GLN n 1 161 ARG n 1 162 VAL n 1 163 LYS n 1 164 MET n 1 165 GLU n 1 166 VAL n 1 167 GLU n 1 168 ARG n 1 169 SER n 1 170 LYS n 1 171 GLN n 1 172 ASP n 1 173 ILE n 1 174 PRO n 1 175 LYS n 1 176 GLY n 1 177 PHE n 1 178 ILE n 1 179 MET n 1 180 PRO n 1 181 THR n 1 182 SER n 1 183 GLU n 1 184 SER n 1 185 ALA n 1 186 TYR n 1 187 ILE n 1 188 SER n 1 189 GLN n 1 190 SER n 1 191 LYS n 1 192 LEU n 1 193 ASP n 1 194 GLU n 1 195 PRO n 1 196 GLU n 1 197 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 197 _entity_src_gen.gene_src_common_name ;Baker's yeast ; _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'CDC34, DNA6, UBC3, YDR054C, D4211, YD9609.08C' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 204508 / S288c' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Saccharomyces cerevisiae (strain ATCC 204508 / S288c)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 559292 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3) codon plus' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET29NTEV _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code UBC3_YEAST _struct_ref.pdbx_db_accession P14682 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SRKSTASSLLLRQYRELTDPKKAIPSFHIELEDDSNIFTWNIGVMVLNEDSIYHGGFFKAQMRFPEDFPFSPPQFRFTPA IYHPNVYRDGRLCISILHQSGDPMTDEPDAETWSPVQTVESVLISIVSLLEDPNINSPANVDAAVDYRKNPEQYKQRVKM EVERSKQDIPKGFIMPTSESAYISQSKLDEPES ; _struct_ref.pdbx_align_begin 3 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6NYD _struct_ref_seq.pdbx_strand_id C _struct_ref_seq.seq_align_beg 5 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 197 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P14682 _struct_ref_seq.db_align_beg 3 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 195 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 3 _struct_ref_seq.pdbx_auth_seq_align_end 195 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6NYD GLY C 1 ? UNP P14682 ? ? 'expression tag' -1 1 1 6NYD ALA C 2 ? UNP P14682 ? ? 'expression tag' 0 2 1 6NYD MET C 3 ? UNP P14682 ? ? 'expression tag' 1 3 1 6NYD ALA C 4 ? UNP P14682 ? ? 'expression tag' 2 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6NYD _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.27 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 45.84 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.06 M zinc acetate, 0.108mM sodium cacodylate, 14.4% PEG 8,000, 20% glycerol' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 108 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RAYONIX MX300-HS' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-11-28 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'SI(111)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.00 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6NYD _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.65 _reflns.d_resolution_low 50 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 25422 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.8 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.5 _reflns.pdbx_Rmerge_I_obs 0.089 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 20 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.039 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.981 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.65 _reflns_shell.d_res_low 1.71 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 1.151 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all 0.511 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.609 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6NYD _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.65 _refine.ls_d_res_low 37.387 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 25353 _refine.ls_number_reflns_R_free 1999 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.67 _refine.ls_percent_reflns_R_free 7.88 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1731 _refine.ls_R_factor_R_free 0.1991 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1708 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 4MDK _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 19.37 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.18 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1354 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 16 _refine_hist.number_atoms_solvent 103 _refine_hist.number_atoms_total 1473 _refine_hist.d_res_high 1.65 _refine_hist.d_res_low 37.387 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.010 ? 1450 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.072 ? 1978 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 13.221 ? 901 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.059 ? 212 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.008 ? 264 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.6480 1.6892 . . 140 1640 99.00 . . . 0.3315 . 0.2906 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.6892 1.7349 . . 141 1638 100.00 . . . 0.2597 . 0.2484 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.7349 1.7859 . . 140 1634 100.00 . . . 0.2714 . 0.2212 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.7859 1.8436 . . 141 1647 100.00 . . . 0.2538 . 0.2114 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.8436 1.9094 . . 142 1660 100.00 . . . 0.2196 . 0.1997 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.9094 1.9859 . . 141 1644 100.00 . . . 0.2111 . 0.1808 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.9859 2.0763 . . 141 1646 100.00 . . . 0.2146 . 0.1728 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.0763 2.1857 . . 142 1674 100.00 . . . 0.1850 . 0.1625 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.1857 2.3226 . . 142 1652 100.00 . . . 0.1869 . 0.1568 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.3226 2.5019 . . 143 1679 100.00 . . . 0.1958 . 0.1613 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.5019 2.7536 . . 144 1674 100.00 . . . 0.2039 . 0.1666 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.7536 3.1519 . . 145 1692 100.00 . . . 0.1977 . 0.1709 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.1519 3.9704 . . 147 1720 100.00 . . . 0.1824 . 0.1547 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.9704 37.3969 . . 150 1754 97.00 . . . 0.1972 . 0.1731 . . . . . . . . . . # _struct.entry_id 6NYD _struct.title 'Crystal Structure of S. cerevisiae Ubc3 (Cdc34)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6NYD _struct_keywords.text ;CONFORMATIONAL CHANGE, THIOESTER, ADENYLATION, THIOESTER TRANSFER, TRANSTHIOESTERIFICATION, ATP-BINDING, UBIQUITIN E2-BINDING, UBIQUITINATION, LIGASE, LIGASE-TRANSFERASE complex ; _struct_keywords.pdbx_keywords LIGASE/TRANSFERASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 5 ? ASP A 23 ? SER C 3 ASP C 21 1 ? 19 HELX_P HELX_P2 AA2 ASP A 37 ? SER A 39 ? ASP C 35 SER C 37 5 ? 3 HELX_P HELX_P3 AA3 ILE A 98 ? HIS A 102 ? ILE C 96 HIS C 100 5 ? 5 HELX_P HELX_P4 AA4 THR A 122 ? ASP A 136 ? THR C 120 ASP C 134 1 ? 15 HELX_P HELX_P5 AA5 ASN A 144 ? ASN A 154 ? ASN C 142 ASN C 152 1 ? 11 HELX_P HELX_P6 AA6 ASN A 154 ? LYS A 170 ? ASN C 152 LYS C 168 1 ? 17 HELX_P HELX_P7 AA7 GLN A 171 ? ILE A 173 ? GLN C 169 ILE C 171 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A HIS 32 NE2 ? ? ? 1_555 D ZN . ZN ? ? C HIS 30 C ZN 703 1_555 ? ? ? ? ? ? ? 1.949 ? ? metalc2 metalc ? ? A GLU 34 OE2 ? ? ? 1_555 D ZN . ZN ? ? C GLU 32 C ZN 703 1_555 ? ? ? ? ? ? ? 2.001 ? ? metalc3 metalc ? ? A ASP 54 OD1 ? ? ? 1_555 B ZN . ZN ? ? C ASP 52 C ZN 701 3_544 ? ? ? ? ? ? ? 2.377 ? ? metalc4 metalc ? ? A ASP 54 OD2 ? ? ? 1_555 B ZN . ZN ? ? C ASP 52 C ZN 701 3_544 ? ? ? ? ? ? ? 2.203 ? ? metalc5 metalc ? ? A HIS 58 NE2 ? ? ? 1_555 E ZN . ZN ? ? C HIS 56 C ZN 704 1_555 ? ? ? ? ? ? ? 2.135 ? ? metalc6 metalc ? ? A CYS 97 SG ? ? ? 1_555 B ZN . ZN ? ? C CYS 95 C ZN 701 1_555 ? ? ? ? ? ? ? 2.229 ? ? metalc7 metalc ? ? A HIS 102 NE2 ? ? ? 1_555 B ZN . ZN ? ? C HIS 100 C ZN 701 1_555 ? ? ? ? ? ? ? 1.932 ? ? metalc8 metalc ? ? D ZN . ZN ? ? ? 1_555 I HOH . O ? ? C ZN 703 C HOH 888 1_555 ? ? ? ? ? ? ? 2.200 ? ? metalc9 metalc ? ? D ZN . ZN ? ? ? 1_555 I HOH . O ? ? C ZN 703 C HOH 897 1_555 ? ? ? ? ? ? ? 2.632 ? ? metalc10 metalc ? ? E ZN . ZN ? ? ? 1_555 I HOH . O ? ? C ZN 704 C HOH 889 1_555 ? ? ? ? ? ? ? 2.204 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 PHE 72 A . ? PHE 70 C PRO 73 A ? PRO 71 C 1 7.81 2 THR 82 A . ? THR 80 C PRO 83 A ? PRO 81 C 1 7.30 3 GLN 103 A . ? GLN 101 C SER 104 A ? SER 102 C 1 15.31 # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 PHE A 31 ? GLU A 36 ? PHE C 29 GLU C 34 AA1 2 ASN A 40 ? VAL A 48 ? ASN C 38 VAL C 46 AA1 3 PHE A 62 ? ARG A 67 ? PHE C 60 ARG C 65 AA1 4 GLN A 78 ? PHE A 81 ? GLN C 76 PHE C 79 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLU A 36 ? N GLU C 34 O THR A 43 ? O THR C 41 AA1 2 3 N VAL A 48 ? N VAL C 46 O PHE A 62 ? O PHE C 60 AA1 3 4 N GLN A 65 ? N GLN C 63 O ARG A 80 ? O ARG C 78 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software C ZN 701 ? 3 'binding site for residue ZN C 701' AC2 Software C ZN 702 ? 4 'binding site for residue ZN C 702' AC3 Software C ZN 703 ? 4 'binding site for residue ZN C 703' AC4 Software C ZN 704 ? 3 'binding site for residue ZN C 704' AC5 Software C ACT 705 ? 4 'binding site for residue ACT C 705' AC6 Software C ACT 706 ? 8 'binding site for residue ACT C 706' AC7 Software C ACT 707 ? 5 'binding site for residue ACT C 707' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 ASP A 54 ? ASP C 52 . ? 3_554 ? 2 AC1 3 CYS A 97 ? CYS C 95 . ? 1_555 ? 3 AC1 3 HIS A 102 ? HIS C 100 . ? 1_555 ? 4 AC2 4 ASP A 146 ? ASP C 144 . ? 1_555 ? 5 AC2 4 ASP A 150 ? ASP C 148 . ? 1_555 ? 6 AC2 4 GLN A 157 ? GLN C 155 . ? 1_555 ? 7 AC2 4 HOH I . ? HOH C 806 . ? 1_555 ? 8 AC3 4 HIS A 32 ? HIS C 30 . ? 1_555 ? 9 AC3 4 GLU A 34 ? GLU C 32 . ? 1_555 ? 10 AC3 4 HOH I . ? HOH C 888 . ? 1_555 ? 11 AC3 4 HOH I . ? HOH C 897 . ? 1_555 ? 12 AC4 3 GLU A 53 ? GLU C 51 . ? 1_555 ? 13 AC4 3 HIS A 58 ? HIS C 56 . ? 1_555 ? 14 AC4 3 HOH I . ? HOH C 889 . ? 1_555 ? 15 AC5 4 SER A 129 ? SER C 127 . ? 1_555 ? 16 AC5 4 SER A 132 ? SER C 130 . ? 1_555 ? 17 AC5 4 ASP A 146 ? ASP C 144 . ? 3_544 ? 18 AC5 4 HOH I . ? HOH C 815 . ? 1_555 ? 19 AC6 8 LEU A 15 ? LEU C 13 . ? 4_445 ? 20 AC6 8 ARG A 19 ? ARG C 17 . ? 4_445 ? 21 AC6 8 PHE A 74 ? PHE C 72 . ? 1_555 ? 22 AC6 8 SER A 75 ? SER C 73 . ? 1_555 ? 23 AC6 8 GLN A 103 ? GLN C 101 . ? 1_555 ? 24 AC6 8 SER A 104 ? SER C 102 . ? 1_555 ? 25 AC6 8 TRP A 117 ? TRP C 115 . ? 1_555 ? 26 AC6 8 HOH I . ? HOH C 860 . ? 1_555 ? 27 AC7 5 SER A 39 ? SER C 37 . ? 1_555 ? 28 AC7 5 ASN A 40 ? ASN C 38 . ? 1_555 ? 29 AC7 5 ILE A 41 ? ILE C 39 . ? 1_555 ? 30 AC7 5 PRO A 119 ? PRO C 117 . ? 4_545 ? 31 AC7 5 HOH I . ? HOH C 811 . ? 1_555 ? # _atom_sites.entry_id 6NYD _atom_sites.fract_transf_matrix[1][1] 0.024948 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020399 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009645 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -1 ? ? ? C . n A 1 2 ALA 2 0 ? ? ? C . n A 1 3 MET 3 1 ? ? ? C . n A 1 4 ALA 4 2 ? ? ? C . n A 1 5 SER 5 3 3 SER SER C . n A 1 6 ARG 6 4 4 ARG ARG C . n A 1 7 LYS 7 5 5 LYS LYS C . n A 1 8 SER 8 6 6 SER SER C . n A 1 9 THR 9 7 7 THR THR C . n A 1 10 ALA 10 8 8 ALA ALA C . n A 1 11 SER 11 9 9 SER SER C . n A 1 12 SER 12 10 10 SER SER C . n A 1 13 LEU 13 11 11 LEU LEU C . n A 1 14 LEU 14 12 12 LEU LEU C . n A 1 15 LEU 15 13 13 LEU LEU C . n A 1 16 ARG 16 14 14 ARG ARG C . n A 1 17 GLN 17 15 15 GLN GLN C . n A 1 18 TYR 18 16 16 TYR TYR C . n A 1 19 ARG 19 17 17 ARG ARG C . n A 1 20 GLU 20 18 18 GLU GLU C . n A 1 21 LEU 21 19 19 LEU LEU C . n A 1 22 THR 22 20 20 THR THR C . n A 1 23 ASP 23 21 21 ASP ASP C . n A 1 24 PRO 24 22 22 PRO PRO C . n A 1 25 LYS 25 23 23 LYS LYS C . n A 1 26 LYS 26 24 24 LYS LYS C . n A 1 27 ALA 27 25 25 ALA ALA C . n A 1 28 ILE 28 26 26 ILE ILE C . n A 1 29 PRO 29 27 27 PRO PRO C . n A 1 30 SER 30 28 28 SER SER C . n A 1 31 PHE 31 29 29 PHE PHE C . n A 1 32 HIS 32 30 30 HIS HIS C . n A 1 33 ILE 33 31 31 ILE ILE C . n A 1 34 GLU 34 32 32 GLU GLU C . n A 1 35 LEU 35 33 33 LEU LEU C . n A 1 36 GLU 36 34 34 GLU GLU C . n A 1 37 ASP 37 35 35 ASP ASP C . n A 1 38 ASP 38 36 36 ASP ASP C . n A 1 39 SER 39 37 37 SER SER C . n A 1 40 ASN 40 38 38 ASN ASN C . n A 1 41 ILE 41 39 39 ILE ILE C . n A 1 42 PHE 42 40 40 PHE PHE C . n A 1 43 THR 43 41 41 THR THR C . n A 1 44 TRP 44 42 42 TRP TRP C . n A 1 45 ASN 45 43 43 ASN ASN C . n A 1 46 ILE 46 44 44 ILE ILE C . n A 1 47 GLY 47 45 45 GLY GLY C . n A 1 48 VAL 48 46 46 VAL VAL C . n A 1 49 MET 49 47 47 MET MET C . n A 1 50 VAL 50 48 48 VAL VAL C . n A 1 51 LEU 51 49 49 LEU LEU C . n A 1 52 ASN 52 50 50 ASN ASN C . n A 1 53 GLU 53 51 51 GLU GLU C . n A 1 54 ASP 54 52 52 ASP ASP C . n A 1 55 SER 55 53 53 SER SER C . n A 1 56 ILE 56 54 54 ILE ILE C . n A 1 57 TYR 57 55 55 TYR TYR C . n A 1 58 HIS 58 56 56 HIS HIS C . n A 1 59 GLY 59 57 57 GLY GLY C . n A 1 60 GLY 60 58 58 GLY GLY C . n A 1 61 PHE 61 59 59 PHE PHE C . n A 1 62 PHE 62 60 60 PHE PHE C . n A 1 63 LYS 63 61 61 LYS LYS C . n A 1 64 ALA 64 62 62 ALA ALA C . n A 1 65 GLN 65 63 63 GLN GLN C . n A 1 66 MET 66 64 64 MET MET C . n A 1 67 ARG 67 65 65 ARG ARG C . n A 1 68 PHE 68 66 66 PHE PHE C . n A 1 69 PRO 69 67 67 PRO PRO C . n A 1 70 GLU 70 68 68 GLU GLU C . n A 1 71 ASP 71 69 69 ASP ASP C . n A 1 72 PHE 72 70 70 PHE PHE C . n A 1 73 PRO 73 71 71 PRO PRO C . n A 1 74 PHE 74 72 72 PHE PHE C . n A 1 75 SER 75 73 73 SER SER C . n A 1 76 PRO 76 74 74 PRO PRO C . n A 1 77 PRO 77 75 75 PRO PRO C . n A 1 78 GLN 78 76 76 GLN GLN C . n A 1 79 PHE 79 77 77 PHE PHE C . n A 1 80 ARG 80 78 78 ARG ARG C . n A 1 81 PHE 81 79 79 PHE PHE C . n A 1 82 THR 82 80 80 THR THR C . n A 1 83 PRO 83 81 81 PRO PRO C . n A 1 84 ALA 84 82 82 ALA ALA C . n A 1 85 ILE 85 83 83 ILE ILE C . n A 1 86 TYR 86 84 84 TYR TYR C . n A 1 87 HIS 87 85 85 HIS HIS C . n A 1 88 PRO 88 86 86 PRO PRO C . n A 1 89 ASN 89 87 87 ASN ASN C . n A 1 90 VAL 90 88 88 VAL VAL C . n A 1 91 TYR 91 89 89 TYR TYR C . n A 1 92 ARG 92 90 90 ARG ARG C . n A 1 93 ASP 93 91 91 ASP ASP C . n A 1 94 GLY 94 92 92 GLY GLY C . n A 1 95 ARG 95 93 93 ARG ARG C . n A 1 96 LEU 96 94 94 LEU LEU C . n A 1 97 CYS 97 95 95 CYS CYS C . n A 1 98 ILE 98 96 96 ILE ILE C . n A 1 99 SER 99 97 97 SER SER C . n A 1 100 ILE 100 98 98 ILE ILE C . n A 1 101 LEU 101 99 99 LEU LEU C . n A 1 102 HIS 102 100 100 HIS HIS C . n A 1 103 GLN 103 101 101 GLN GLN C . n A 1 104 SER 104 102 102 SER SER C . n A 1 105 GLY 105 103 ? ? ? C . n A 1 106 ASP 106 104 ? ? ? C . n A 1 107 PRO 107 105 ? ? ? C . n A 1 108 MET 108 106 ? ? ? C . n A 1 109 THR 109 107 ? ? ? C . n A 1 110 ASP 110 108 ? ? ? C . n A 1 111 GLU 111 109 ? ? ? C . n A 1 112 PRO 112 110 ? ? ? C . n A 1 113 ASP 113 111 ? ? ? C . n A 1 114 ALA 114 112 ? ? ? C . n A 1 115 GLU 115 113 113 GLU GLU C . n A 1 116 THR 116 114 114 THR THR C . n A 1 117 TRP 117 115 115 TRP TRP C . n A 1 118 SER 118 116 116 SER SER C . n A 1 119 PRO 119 117 117 PRO PRO C . n A 1 120 VAL 120 118 118 VAL VAL C . n A 1 121 GLN 121 119 119 GLN GLN C . n A 1 122 THR 122 120 120 THR THR C . n A 1 123 VAL 123 121 121 VAL VAL C . n A 1 124 GLU 124 122 122 GLU GLU C . n A 1 125 SER 125 123 123 SER SER C . n A 1 126 VAL 126 124 124 VAL VAL C . n A 1 127 LEU 127 125 125 LEU LEU C . n A 1 128 ILE 128 126 126 ILE ILE C . n A 1 129 SER 129 127 127 SER SER C . n A 1 130 ILE 130 128 128 ILE ILE C . n A 1 131 VAL 131 129 129 VAL VAL C . n A 1 132 SER 132 130 130 SER SER C . n A 1 133 LEU 133 131 131 LEU LEU C . n A 1 134 LEU 134 132 132 LEU LEU C . n A 1 135 GLU 135 133 133 GLU GLU C . n A 1 136 ASP 136 134 134 ASP ASP C . n A 1 137 PRO 137 135 135 PRO PRO C . n A 1 138 ASN 138 136 136 ASN ASN C . n A 1 139 ILE 139 137 137 ILE ILE C . n A 1 140 ASN 140 138 138 ASN ASN C . n A 1 141 SER 141 139 139 SER SER C . n A 1 142 PRO 142 140 140 PRO PRO C . n A 1 143 ALA 143 141 141 ALA ALA C . n A 1 144 ASN 144 142 142 ASN ASN C . n A 1 145 VAL 145 143 143 VAL VAL C . n A 1 146 ASP 146 144 144 ASP ASP C . n A 1 147 ALA 147 145 145 ALA ALA C . n A 1 148 ALA 148 146 146 ALA ALA C . n A 1 149 VAL 149 147 147 VAL VAL C . n A 1 150 ASP 150 148 148 ASP ASP C . n A 1 151 TYR 151 149 149 TYR TYR C . n A 1 152 ARG 152 150 150 ARG ARG C . n A 1 153 LYS 153 151 151 LYS LYS C . n A 1 154 ASN 154 152 152 ASN ASN C . n A 1 155 PRO 155 153 153 PRO PRO C . n A 1 156 GLU 156 154 154 GLU GLU C . n A 1 157 GLN 157 155 155 GLN GLN C . n A 1 158 TYR 158 156 156 TYR TYR C . n A 1 159 LYS 159 157 157 LYS LYS C . n A 1 160 GLN 160 158 158 GLN GLN C . n A 1 161 ARG 161 159 159 ARG ARG C . n A 1 162 VAL 162 160 160 VAL VAL C . n A 1 163 LYS 163 161 161 LYS LYS C . n A 1 164 MET 164 162 162 MET MET C . n A 1 165 GLU 165 163 163 GLU GLU C . n A 1 166 VAL 166 164 164 VAL VAL C . n A 1 167 GLU 167 165 165 GLU GLU C . n A 1 168 ARG 168 166 166 ARG ARG C . n A 1 169 SER 169 167 167 SER SER C . n A 1 170 LYS 170 168 168 LYS LYS C . n A 1 171 GLN 171 169 169 GLN GLN C . n A 1 172 ASP 172 170 170 ASP ASP C . n A 1 173 ILE 173 171 171 ILE ILE C . n A 1 174 PRO 174 172 172 PRO PRO C . n A 1 175 LYS 175 173 173 LYS LYS C . n A 1 176 GLY 176 174 174 GLY GLY C . n A 1 177 PHE 177 175 175 PHE PHE C . n A 1 178 ILE 178 176 176 ILE ILE C . n A 1 179 MET 179 177 177 MET MET C . n A 1 180 PRO 180 178 178 PRO PRO C . n A 1 181 THR 181 179 ? ? ? C . n A 1 182 SER 182 180 ? ? ? C . n A 1 183 GLU 183 181 ? ? ? C . n A 1 184 SER 184 182 ? ? ? C . n A 1 185 ALA 185 183 ? ? ? C . n A 1 186 TYR 186 184 ? ? ? C . n A 1 187 ILE 187 185 ? ? ? C . n A 1 188 SER 188 186 ? ? ? C . n A 1 189 GLN 189 187 ? ? ? C . n A 1 190 SER 190 188 ? ? ? C . n A 1 191 LYS 191 189 ? ? ? C . n A 1 192 LEU 192 190 ? ? ? C . n A 1 193 ASP 193 191 ? ? ? C . n A 1 194 GLU 194 192 ? ? ? C . n A 1 195 PRO 195 193 ? ? ? C . n A 1 196 GLU 196 194 ? ? ? C . n A 1 197 SER 197 195 ? ? ? C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN 1 701 701 ZN ZN C . C 2 ZN 1 702 703 ZN ZN C . D 2 ZN 1 703 704 ZN ZN C . E 2 ZN 1 704 705 ZN ZN C . F 3 ACT 1 705 1 ACT ACT C . G 3 ACT 1 706 3 ACT ACT C . H 3 ACT 1 707 4 ACT ACT C . I 4 HOH 1 801 41 HOH HOH C . I 4 HOH 2 802 88 HOH HOH C . I 4 HOH 3 803 29 HOH HOH C . I 4 HOH 4 804 125 HOH HOH C . I 4 HOH 5 805 47 HOH HOH C . I 4 HOH 6 806 53 HOH HOH C . I 4 HOH 7 807 70 HOH HOH C . I 4 HOH 8 808 27 HOH HOH C . I 4 HOH 9 809 74 HOH HOH C . I 4 HOH 10 810 72 HOH HOH C . I 4 HOH 11 811 63 HOH HOH C . I 4 HOH 12 812 39 HOH HOH C . I 4 HOH 13 813 19 HOH HOH C . I 4 HOH 14 814 13 HOH HOH C . I 4 HOH 15 815 24 HOH HOH C . I 4 HOH 16 816 98 HOH HOH C . I 4 HOH 17 817 18 HOH HOH C . I 4 HOH 18 818 92 HOH HOH C . I 4 HOH 19 819 55 HOH HOH C . I 4 HOH 20 820 22 HOH HOH C . I 4 HOH 21 821 5 HOH HOH C . I 4 HOH 22 822 25 HOH HOH C . I 4 HOH 23 823 37 HOH HOH C . I 4 HOH 24 824 15 HOH HOH C . I 4 HOH 25 825 49 HOH HOH C . I 4 HOH 26 826 1 HOH HOH C . I 4 HOH 27 827 4 HOH HOH C . I 4 HOH 28 828 9 HOH HOH C . I 4 HOH 29 829 86 HOH HOH C . I 4 HOH 30 830 100 HOH HOH C . I 4 HOH 31 831 56 HOH HOH C . I 4 HOH 32 832 2 HOH HOH C . I 4 HOH 33 833 137 HOH HOH C . I 4 HOH 34 834 102 HOH HOH C . I 4 HOH 35 835 76 HOH HOH C . I 4 HOH 36 836 91 HOH HOH C . I 4 HOH 37 837 106 HOH HOH C . I 4 HOH 38 838 84 HOH HOH C . I 4 HOH 39 839 71 HOH HOH C . I 4 HOH 40 840 26 HOH HOH C . I 4 HOH 41 841 46 HOH HOH C . I 4 HOH 42 842 78 HOH HOH C . I 4 HOH 43 843 51 HOH HOH C . I 4 HOH 44 844 3 HOH HOH C . I 4 HOH 45 845 48 HOH HOH C . I 4 HOH 46 846 42 HOH HOH C . I 4 HOH 47 847 77 HOH HOH C . I 4 HOH 48 848 38 HOH HOH C . I 4 HOH 49 849 93 HOH HOH C . I 4 HOH 50 850 6 HOH HOH C . I 4 HOH 51 851 17 HOH HOH C . I 4 HOH 52 852 7 HOH HOH C . I 4 HOH 53 853 58 HOH HOH C . I 4 HOH 54 854 36 HOH HOH C . I 4 HOH 55 855 35 HOH HOH C . I 4 HOH 56 856 45 HOH HOH C . I 4 HOH 57 857 85 HOH HOH C . I 4 HOH 58 858 90 HOH HOH C . I 4 HOH 59 859 8 HOH HOH C . I 4 HOH 60 860 64 HOH HOH C . I 4 HOH 61 861 50 HOH HOH C . I 4 HOH 62 862 61 HOH HOH C . I 4 HOH 63 863 11 HOH HOH C . I 4 HOH 64 864 57 HOH HOH C . I 4 HOH 65 865 59 HOH HOH C . I 4 HOH 66 866 16 HOH HOH C . I 4 HOH 67 867 60 HOH HOH C . I 4 HOH 68 868 96 HOH HOH C . I 4 HOH 69 869 69 HOH HOH C . I 4 HOH 70 870 34 HOH HOH C . I 4 HOH 71 871 135 HOH HOH C . I 4 HOH 72 872 30 HOH HOH C . I 4 HOH 73 873 122 HOH HOH C . I 4 HOH 74 874 79 HOH HOH C . I 4 HOH 75 875 33 HOH HOH C . I 4 HOH 76 876 28 HOH HOH C . I 4 HOH 77 877 14 HOH HOH C . I 4 HOH 78 878 44 HOH HOH C . I 4 HOH 79 879 94 HOH HOH C . I 4 HOH 80 880 10 HOH HOH C . I 4 HOH 81 881 32 HOH HOH C . I 4 HOH 82 882 145 HOH HOH C . I 4 HOH 83 883 144 HOH HOH C . I 4 HOH 84 884 142 HOH HOH C . I 4 HOH 85 885 52 HOH HOH C . I 4 HOH 86 886 65 HOH HOH C . I 4 HOH 87 887 54 HOH HOH C . I 4 HOH 88 888 123 HOH HOH C . I 4 HOH 89 889 68 HOH HOH C . I 4 HOH 90 890 23 HOH HOH C . I 4 HOH 91 891 95 HOH HOH C . I 4 HOH 92 892 20 HOH HOH C . I 4 HOH 93 893 40 HOH HOH C . I 4 HOH 94 894 134 HOH HOH C . I 4 HOH 95 895 43 HOH HOH C . I 4 HOH 96 896 149 HOH HOH C . I 4 HOH 97 897 89 HOH HOH C . I 4 HOH 98 898 87 HOH HOH C . I 4 HOH 99 899 21 HOH HOH C . I 4 HOH 100 900 81 HOH HOH C . I 4 HOH 101 901 31 HOH HOH C . I 4 HOH 102 902 12 HOH HOH C . I 4 HOH 103 903 101 HOH HOH C . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 32 ? C HIS 30 ? 1_555 ZN ? D ZN . ? C ZN 703 ? 1_555 OE2 ? A GLU 34 ? C GLU 32 ? 1_555 102.0 ? 2 NE2 ? A HIS 32 ? C HIS 30 ? 1_555 ZN ? D ZN . ? C ZN 703 ? 1_555 O ? I HOH . ? C HOH 888 ? 1_555 118.3 ? 3 OE2 ? A GLU 34 ? C GLU 32 ? 1_555 ZN ? D ZN . ? C ZN 703 ? 1_555 O ? I HOH . ? C HOH 888 ? 1_555 103.0 ? 4 NE2 ? A HIS 32 ? C HIS 30 ? 1_555 ZN ? D ZN . ? C ZN 703 ? 1_555 O ? I HOH . ? C HOH 897 ? 1_555 131.5 ? 5 OE2 ? A GLU 34 ? C GLU 32 ? 1_555 ZN ? D ZN . ? C ZN 703 ? 1_555 O ? I HOH . ? C HOH 897 ? 1_555 102.1 ? 6 O ? I HOH . ? C HOH 888 ? 1_555 ZN ? D ZN . ? C ZN 703 ? 1_555 O ? I HOH . ? C HOH 897 ? 1_555 96.1 ? 7 OD1 ? A ASP 54 ? C ASP 52 ? 1_555 ZN ? B ZN . ? C ZN 701 ? 3_544 OD2 ? A ASP 54 ? C ASP 52 ? 1_555 57.9 ? 8 OD1 ? A ASP 54 ? C ASP 52 ? 1_555 ZN ? B ZN . ? C ZN 701 ? 3_544 SG ? A CYS 97 ? C CYS 95 ? 1_555 3.0 ? 9 OD2 ? A ASP 54 ? C ASP 52 ? 1_555 ZN ? B ZN . ? C ZN 701 ? 3_544 SG ? A CYS 97 ? C CYS 95 ? 1_555 55.9 ? 10 OD1 ? A ASP 54 ? C ASP 52 ? 1_555 ZN ? B ZN . ? C ZN 701 ? 3_544 NE2 ? A HIS 102 ? C HIS 100 ? 1_555 2.2 ? 11 OD2 ? A ASP 54 ? C ASP 52 ? 1_555 ZN ? B ZN . ? C ZN 701 ? 3_544 NE2 ? A HIS 102 ? C HIS 100 ? 1_555 60.0 ? 12 SG ? A CYS 97 ? C CYS 95 ? 1_555 ZN ? B ZN . ? C ZN 701 ? 3_544 NE2 ? A HIS 102 ? C HIS 100 ? 1_555 5.0 ? 13 NE2 ? A HIS 58 ? C HIS 56 ? 1_555 ZN ? E ZN . ? C ZN 704 ? 1_555 O ? I HOH . ? C HOH 889 ? 1_555 100.1 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-08-07 2 'Structure model' 1 1 2020-01-01 3 'Structure model' 1 2 2023-10-11 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Author supporting evidence' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' pdbx_audit_support 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond 4 3 'Structure model' database_2 5 3 'Structure model' pdbx_initial_refinement_model 6 3 'Structure model' pdbx_struct_conn_angle 7 3 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_pdbx_audit_support.funding_organization' 2 3 'Structure model' '_database_2.pdbx_DOI' 3 3 'Structure model' '_database_2.pdbx_database_accession' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_symmetry' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 16 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 17 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 18 3 'Structure model' '_pdbx_struct_conn_angle.value' 19 3 'Structure model' '_struct_conn.pdbx_dist_value' 20 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 21 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 22 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 23 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 24 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 25 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 26 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 27 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 28 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 29 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 30 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 31 3 'Structure model' '_struct_conn.ptnr2_symmetry' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 11.4364 -15.0201 -1.0817 0.2091 0.3176 0.2388 -0.0183 -0.0160 0.0457 6.8802 6.7381 3.9576 -2.1779 -1.7077 2.9135 -0.0442 -0.2036 -0.4272 0.0136 -0.2833 0.2189 0.6059 -0.3050 0.1604 'X-RAY DIFFRACTION' 2 ? refined 16.7942 -18.2288 -12.5315 0.4081 0.4863 0.4632 0.0611 -0.0273 -0.0381 5.2987 2.1193 5.3770 0.0787 2.4727 2.2408 0.3304 0.2238 -0.4299 0.0291 0.1197 -0.5966 0.5372 0.4758 -0.2023 'X-RAY DIFFRACTION' 3 ? refined 11.5655 -15.0377 -21.7969 0.2823 0.2496 0.2966 -0.0308 0.0292 0.0096 3.2710 2.2199 7.0562 0.8993 1.1940 0.2990 0.0315 0.3082 -0.1962 -0.2269 0.1235 -0.2812 0.6346 -0.0399 -0.1399 'X-RAY DIFFRACTION' 4 ? refined 7.9573 -7.1750 -8.4290 0.2065 0.2618 0.2924 -0.0130 -0.0214 0.0147 4.3550 2.0337 3.0843 -1.4827 -1.4612 1.0204 0.1662 -0.5038 0.2209 0.1045 0.1217 -0.1365 -0.5517 0.0911 -0.1168 'X-RAY DIFFRACTION' 5 ? refined 9.4645 -4.3300 -22.0443 0.3043 0.2375 0.3644 0.0282 0.0259 0.0477 3.7162 1.3952 6.6116 0.1701 -0.3627 -2.4240 0.2029 0.2496 0.5127 0.1235 -0.0374 -0.4756 -1.0134 0.2398 0.0357 'X-RAY DIFFRACTION' 6 ? refined 2.7263 -3.0104 -21.0386 0.3348 0.2206 0.3575 0.0181 -0.0259 0.0212 4.4068 1.2352 7.6004 -2.2781 0.9519 0.1379 -0.1670 0.0092 0.5700 -0.1015 0.1792 -0.0105 -0.5830 -0.5890 -0.1394 'X-RAY DIFFRACTION' 7 ? refined -3.0258 -9.8348 -8.0642 0.2602 0.3857 0.3541 0.0340 0.0203 0.0356 9.5614 6.7732 4.0745 -5.1023 3.6067 -5.0925 0.0025 0.9066 0.4673 0.0241 0.0792 0.4744 -0.4622 -0.5200 -0.1565 'X-RAY DIFFRACTION' 8 ? refined -1.1175 -8.6704 -26.5384 0.3174 0.1944 0.2756 0.0139 -0.0314 -0.0031 2.1439 2.9819 6.8617 -1.2434 2.5668 -3.4069 -0.0049 0.0363 0.0913 -0.3737 -0.0468 0.0239 0.0816 -0.0681 -0.1497 'X-RAY DIFFRACTION' 9 ? refined 11.1300 -8.9479 -35.2112 0.5456 0.4219 0.3846 -0.0338 0.1014 0.0081 3.9172 4.7569 8.4055 -3.4950 4.7646 -2.5127 0.1365 1.1794 0.3067 -1.3257 -0.4231 -0.7818 0.1845 0.9218 0.2161 'X-RAY DIFFRACTION' 10 ? refined 22.1530 -19.3868 -24.0609 0.5511 0.7525 0.9223 0.1202 0.0505 -0.1793 6.6348 4.5773 6.4177 -5.2171 -2.0476 -0.0286 -0.8515 0.6692 -0.5017 0.7067 0.3060 -1.1321 0.4190 0.0044 0.2474 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;chain 'C' and (resid 3 through 20 ) ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;chain 'C' and (resid 21 through 37 ) ; 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? ;chain 'C' and (resid 38 through 59 ) ; 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? ;chain 'C' and (resid 60 through 75 ) ; 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? ;chain 'C' and (resid 76 through 84 ) ; 'X-RAY DIFFRACTION' 6 6 ? ? ? ? ? ? ? ? ? ;chain 'C' and (resid 85 through 99 ) ; 'X-RAY DIFFRACTION' 7 7 ? ? ? ? ? ? ? ? ? ;chain 'C' and (resid 100 through 120 ) ; 'X-RAY DIFFRACTION' 8 8 ? ? ? ? ? ? ? ? ? ;chain 'C' and (resid 121 through 152 ) ; 'X-RAY DIFFRACTION' 9 9 ? ? ? ? ? ? ? ? ? ;chain 'C' and (resid 153 through 170 ) ; 'X-RAY DIFFRACTION' 10 10 ? ? ? ? ? ? ? ? ? ;chain 'C' and (resid 171 through 178 ) ; # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.10.1_2155)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALEPACK ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O C HOH 816 ? ? O C HOH 868 ? ? 2.08 2 1 O C THR 114 ? ? O C HOH 801 ? ? 2.09 3 1 OE1 C GLU 163 ? ? O C HOH 802 ? ? 2.12 4 1 O C HOH 830 ? ? O C HOH 834 ? ? 2.16 5 1 OH C TYR 55 ? ? O C HOH 803 ? ? 2.18 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP C 36 ? ? 59.91 16.29 2 1 SER C 37 ? ? -148.22 -13.88 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 C GLY -1 ? A GLY 1 2 1 Y 1 C ALA 0 ? A ALA 2 3 1 Y 1 C MET 1 ? A MET 3 4 1 Y 1 C ALA 2 ? A ALA 4 5 1 Y 1 C GLY 103 ? A GLY 105 6 1 Y 1 C ASP 104 ? A ASP 106 7 1 Y 1 C PRO 105 ? A PRO 107 8 1 Y 1 C MET 106 ? A MET 108 9 1 Y 1 C THR 107 ? A THR 109 10 1 Y 1 C ASP 108 ? A ASP 110 11 1 Y 1 C GLU 109 ? A GLU 111 12 1 Y 1 C PRO 110 ? A PRO 112 13 1 Y 1 C ASP 111 ? A ASP 113 14 1 Y 1 C ALA 112 ? A ALA 114 15 1 Y 1 C THR 179 ? A THR 181 16 1 Y 1 C SER 180 ? A SER 182 17 1 Y 1 C GLU 181 ? A GLU 183 18 1 Y 1 C SER 182 ? A SER 184 19 1 Y 1 C ALA 183 ? A ALA 185 20 1 Y 1 C TYR 184 ? A TYR 186 21 1 Y 1 C ILE 185 ? A ILE 187 22 1 Y 1 C SER 186 ? A SER 188 23 1 Y 1 C GLN 187 ? A GLN 189 24 1 Y 1 C SER 188 ? A SER 190 25 1 Y 1 C LYS 189 ? A LYS 191 26 1 Y 1 C LEU 190 ? A LEU 192 27 1 Y 1 C ASP 191 ? A ASP 193 28 1 Y 1 C GLU 192 ? A GLU 194 29 1 Y 1 C PRO 193 ? A PRO 195 30 1 Y 1 C GLU 194 ? A GLU 196 31 1 Y 1 C SER 195 ? A SER 197 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACT C C N N 1 ACT O O N N 2 ACT OXT O N N 3 ACT CH3 C N N 4 ACT H1 H N N 5 ACT H2 H N N 6 ACT H3 H N N 7 ALA N N N N 8 ALA CA C N S 9 ALA C C N N 10 ALA O O N N 11 ALA CB C N N 12 ALA OXT O N N 13 ALA H H N N 14 ALA H2 H N N 15 ALA HA H N N 16 ALA HB1 H N N 17 ALA HB2 H N N 18 ALA HB3 H N N 19 ALA HXT H N N 20 ARG N N N N 21 ARG CA C N S 22 ARG C C N N 23 ARG O O N N 24 ARG CB C N N 25 ARG CG C N N 26 ARG CD C N N 27 ARG NE N N N 28 ARG CZ C N N 29 ARG NH1 N N N 30 ARG NH2 N N N 31 ARG OXT O N N 32 ARG H H N N 33 ARG H2 H N N 34 ARG HA H N N 35 ARG HB2 H N N 36 ARG HB3 H N N 37 ARG HG2 H N N 38 ARG HG3 H N N 39 ARG HD2 H N N 40 ARG HD3 H N N 41 ARG HE H N N 42 ARG HH11 H N N 43 ARG HH12 H N N 44 ARG HH21 H N N 45 ARG HH22 H N N 46 ARG HXT H N N 47 ASN N N N N 48 ASN CA C N S 49 ASN C C N N 50 ASN O O N N 51 ASN CB C N N 52 ASN CG C N N 53 ASN OD1 O N N 54 ASN ND2 N N N 55 ASN OXT O N N 56 ASN H H N N 57 ASN H2 H N N 58 ASN HA H N N 59 ASN HB2 H N N 60 ASN HB3 H N N 61 ASN HD21 H N N 62 ASN HD22 H N N 63 ASN HXT H N N 64 ASP N N N N 65 ASP CA C N S 66 ASP C C N N 67 ASP O O N N 68 ASP CB C N N 69 ASP CG C N N 70 ASP OD1 O N N 71 ASP OD2 O N N 72 ASP OXT O N N 73 ASP H H N N 74 ASP H2 H N N 75 ASP HA H N N 76 ASP HB2 H N N 77 ASP HB3 H N N 78 ASP HD2 H N N 79 ASP HXT H N N 80 CYS N N N N 81 CYS CA C N R 82 CYS C C N N 83 CYS O O N N 84 CYS CB C N N 85 CYS SG S N N 86 CYS OXT O N N 87 CYS H H N N 88 CYS H2 H N N 89 CYS HA H N N 90 CYS HB2 H N N 91 CYS HB3 H N N 92 CYS HG H N N 93 CYS HXT H N N 94 GLN N N N N 95 GLN CA C N S 96 GLN C C N N 97 GLN O O N N 98 GLN CB C N N 99 GLN CG C N N 100 GLN CD C N N 101 GLN OE1 O N N 102 GLN NE2 N N N 103 GLN OXT O N N 104 GLN H H N N 105 GLN H2 H N N 106 GLN HA H N N 107 GLN HB2 H N N 108 GLN HB3 H N N 109 GLN HG2 H N N 110 GLN HG3 H N N 111 GLN HE21 H N N 112 GLN HE22 H N N 113 GLN HXT H N N 114 GLU N N N N 115 GLU CA C N S 116 GLU C C N N 117 GLU O O N N 118 GLU CB C N N 119 GLU CG C N N 120 GLU CD C N N 121 GLU OE1 O N N 122 GLU OE2 O N N 123 GLU OXT O N N 124 GLU H H N N 125 GLU H2 H N N 126 GLU HA H N N 127 GLU HB2 H N N 128 GLU HB3 H N N 129 GLU HG2 H N N 130 GLU HG3 H N N 131 GLU HE2 H N N 132 GLU HXT H N N 133 GLY N N N N 134 GLY CA C N N 135 GLY C C N N 136 GLY O O N N 137 GLY OXT O N N 138 GLY H H N N 139 GLY H2 H N N 140 GLY HA2 H N N 141 GLY HA3 H N N 142 GLY HXT H N N 143 HIS N N N N 144 HIS CA C N S 145 HIS C C N N 146 HIS O O N N 147 HIS CB C N N 148 HIS CG C Y N 149 HIS ND1 N Y N 150 HIS CD2 C Y N 151 HIS CE1 C Y N 152 HIS NE2 N Y N 153 HIS OXT O N N 154 HIS H H N N 155 HIS H2 H N N 156 HIS HA H N N 157 HIS HB2 H N N 158 HIS HB3 H N N 159 HIS HD1 H N N 160 HIS HD2 H N N 161 HIS HE1 H N N 162 HIS HE2 H N N 163 HIS HXT H N N 164 HOH O O N N 165 HOH H1 H N N 166 HOH H2 H N N 167 ILE N N N N 168 ILE CA C N S 169 ILE C C N N 170 ILE O O N N 171 ILE CB C N S 172 ILE CG1 C N N 173 ILE CG2 C N N 174 ILE CD1 C N N 175 ILE OXT O N N 176 ILE H H N N 177 ILE H2 H N N 178 ILE HA H N N 179 ILE HB H N N 180 ILE HG12 H N N 181 ILE HG13 H N N 182 ILE HG21 H N N 183 ILE HG22 H N N 184 ILE HG23 H N N 185 ILE HD11 H N N 186 ILE HD12 H N N 187 ILE HD13 H N N 188 ILE HXT H N N 189 LEU N N N N 190 LEU CA C N S 191 LEU C C N N 192 LEU O O N N 193 LEU CB C N N 194 LEU CG C N N 195 LEU CD1 C N N 196 LEU CD2 C N N 197 LEU OXT O N N 198 LEU H H N N 199 LEU H2 H N N 200 LEU HA H N N 201 LEU HB2 H N N 202 LEU HB3 H N N 203 LEU HG H N N 204 LEU HD11 H N N 205 LEU HD12 H N N 206 LEU HD13 H N N 207 LEU HD21 H N N 208 LEU HD22 H N N 209 LEU HD23 H N N 210 LEU HXT H N N 211 LYS N N N N 212 LYS CA C N S 213 LYS C C N N 214 LYS O O N N 215 LYS CB C N N 216 LYS CG C N N 217 LYS CD C N N 218 LYS CE C N N 219 LYS NZ N N N 220 LYS OXT O N N 221 LYS H H N N 222 LYS H2 H N N 223 LYS HA H N N 224 LYS HB2 H N N 225 LYS HB3 H N N 226 LYS HG2 H N N 227 LYS HG3 H N N 228 LYS HD2 H N N 229 LYS HD3 H N N 230 LYS HE2 H N N 231 LYS HE3 H N N 232 LYS HZ1 H N N 233 LYS HZ2 H N N 234 LYS HZ3 H N N 235 LYS HXT H N N 236 MET N N N N 237 MET CA C N S 238 MET C C N N 239 MET O O N N 240 MET CB C N N 241 MET CG C N N 242 MET SD S N N 243 MET CE C N N 244 MET OXT O N N 245 MET H H N N 246 MET H2 H N N 247 MET HA H N N 248 MET HB2 H N N 249 MET HB3 H N N 250 MET HG2 H N N 251 MET HG3 H N N 252 MET HE1 H N N 253 MET HE2 H N N 254 MET HE3 H N N 255 MET HXT H N N 256 PHE N N N N 257 PHE CA C N S 258 PHE C C N N 259 PHE O O N N 260 PHE CB C N N 261 PHE CG C Y N 262 PHE CD1 C Y N 263 PHE CD2 C Y N 264 PHE CE1 C Y N 265 PHE CE2 C Y N 266 PHE CZ C Y N 267 PHE OXT O N N 268 PHE H H N N 269 PHE H2 H N N 270 PHE HA H N N 271 PHE HB2 H N N 272 PHE HB3 H N N 273 PHE HD1 H N N 274 PHE HD2 H N N 275 PHE HE1 H N N 276 PHE HE2 H N N 277 PHE HZ H N N 278 PHE HXT H N N 279 PRO N N N N 280 PRO CA C N S 281 PRO C C N N 282 PRO O O N N 283 PRO CB C N N 284 PRO CG C N N 285 PRO CD C N N 286 PRO OXT O N N 287 PRO H H N N 288 PRO HA H N N 289 PRO HB2 H N N 290 PRO HB3 H N N 291 PRO HG2 H N N 292 PRO HG3 H N N 293 PRO HD2 H N N 294 PRO HD3 H N N 295 PRO HXT H N N 296 SER N N N N 297 SER CA C N S 298 SER C C N N 299 SER O O N N 300 SER CB C N N 301 SER OG O N N 302 SER OXT O N N 303 SER H H N N 304 SER H2 H N N 305 SER HA H N N 306 SER HB2 H N N 307 SER HB3 H N N 308 SER HG H N N 309 SER HXT H N N 310 THR N N N N 311 THR CA C N S 312 THR C C N N 313 THR O O N N 314 THR CB C N R 315 THR OG1 O N N 316 THR CG2 C N N 317 THR OXT O N N 318 THR H H N N 319 THR H2 H N N 320 THR HA H N N 321 THR HB H N N 322 THR HG1 H N N 323 THR HG21 H N N 324 THR HG22 H N N 325 THR HG23 H N N 326 THR HXT H N N 327 TRP N N N N 328 TRP CA C N S 329 TRP C C N N 330 TRP O O N N 331 TRP CB C N N 332 TRP CG C Y N 333 TRP CD1 C Y N 334 TRP CD2 C Y N 335 TRP NE1 N Y N 336 TRP CE2 C Y N 337 TRP CE3 C Y N 338 TRP CZ2 C Y N 339 TRP CZ3 C Y N 340 TRP CH2 C Y N 341 TRP OXT O N N 342 TRP H H N N 343 TRP H2 H N N 344 TRP HA H N N 345 TRP HB2 H N N 346 TRP HB3 H N N 347 TRP HD1 H N N 348 TRP HE1 H N N 349 TRP HE3 H N N 350 TRP HZ2 H N N 351 TRP HZ3 H N N 352 TRP HH2 H N N 353 TRP HXT H N N 354 TYR N N N N 355 TYR CA C N S 356 TYR C C N N 357 TYR O O N N 358 TYR CB C N N 359 TYR CG C Y N 360 TYR CD1 C Y N 361 TYR CD2 C Y N 362 TYR CE1 C Y N 363 TYR CE2 C Y N 364 TYR CZ C Y N 365 TYR OH O N N 366 TYR OXT O N N 367 TYR H H N N 368 TYR H2 H N N 369 TYR HA H N N 370 TYR HB2 H N N 371 TYR HB3 H N N 372 TYR HD1 H N N 373 TYR HD2 H N N 374 TYR HE1 H N N 375 TYR HE2 H N N 376 TYR HH H N N 377 TYR HXT H N N 378 VAL N N N N 379 VAL CA C N S 380 VAL C C N N 381 VAL O O N N 382 VAL CB C N N 383 VAL CG1 C N N 384 VAL CG2 C N N 385 VAL OXT O N N 386 VAL H H N N 387 VAL H2 H N N 388 VAL HA H N N 389 VAL HB H N N 390 VAL HG11 H N N 391 VAL HG12 H N N 392 VAL HG13 H N N 393 VAL HG21 H N N 394 VAL HG22 H N N 395 VAL HG23 H N N 396 VAL HXT H N N 397 ZN ZN ZN N N 398 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACT C O doub N N 1 ACT C OXT sing N N 2 ACT C CH3 sing N N 3 ACT CH3 H1 sing N N 4 ACT CH3 H2 sing N N 5 ACT CH3 H3 sing N N 6 ALA N CA sing N N 7 ALA N H sing N N 8 ALA N H2 sing N N 9 ALA CA C sing N N 10 ALA CA CB sing N N 11 ALA CA HA sing N N 12 ALA C O doub N N 13 ALA C OXT sing N N 14 ALA CB HB1 sing N N 15 ALA CB HB2 sing N N 16 ALA CB HB3 sing N N 17 ALA OXT HXT sing N N 18 ARG N CA sing N N 19 ARG N H sing N N 20 ARG N H2 sing N N 21 ARG CA C sing N N 22 ARG CA CB sing N N 23 ARG CA HA sing N N 24 ARG C O doub N N 25 ARG C OXT sing N N 26 ARG CB CG sing N N 27 ARG CB HB2 sing N N 28 ARG CB HB3 sing N N 29 ARG CG CD sing N N 30 ARG CG HG2 sing N N 31 ARG CG HG3 sing N N 32 ARG CD NE sing N N 33 ARG CD HD2 sing N N 34 ARG CD HD3 sing N N 35 ARG NE CZ sing N N 36 ARG NE HE sing N N 37 ARG CZ NH1 sing N N 38 ARG CZ NH2 doub N N 39 ARG NH1 HH11 sing N N 40 ARG NH1 HH12 sing N N 41 ARG NH2 HH21 sing N N 42 ARG NH2 HH22 sing N N 43 ARG OXT HXT sing N N 44 ASN N CA sing N N 45 ASN N H sing N N 46 ASN N H2 sing N N 47 ASN CA C sing N N 48 ASN CA CB sing N N 49 ASN CA HA sing N N 50 ASN C O doub N N 51 ASN C OXT sing N N 52 ASN CB CG sing N N 53 ASN CB HB2 sing N N 54 ASN CB HB3 sing N N 55 ASN CG OD1 doub N N 56 ASN CG ND2 sing N N 57 ASN ND2 HD21 sing N N 58 ASN ND2 HD22 sing N N 59 ASN OXT HXT sing N N 60 ASP N CA sing N N 61 ASP N H sing N N 62 ASP N H2 sing N N 63 ASP CA C sing N N 64 ASP CA CB sing N N 65 ASP CA HA sing N N 66 ASP C O doub N N 67 ASP C OXT sing N N 68 ASP CB CG sing N N 69 ASP CB HB2 sing N N 70 ASP CB HB3 sing N N 71 ASP CG OD1 doub N N 72 ASP CG OD2 sing N N 73 ASP OD2 HD2 sing N N 74 ASP OXT HXT sing N N 75 CYS N CA sing N N 76 CYS N H sing N N 77 CYS N H2 sing N N 78 CYS CA C sing N N 79 CYS CA CB sing N N 80 CYS CA HA sing N N 81 CYS C O doub N N 82 CYS C OXT sing N N 83 CYS CB SG sing N N 84 CYS CB HB2 sing N N 85 CYS CB HB3 sing N N 86 CYS SG HG sing N N 87 CYS OXT HXT sing N N 88 GLN N CA sing N N 89 GLN N H sing N N 90 GLN N H2 sing N N 91 GLN CA C sing N N 92 GLN CA CB sing N N 93 GLN CA HA sing N N 94 GLN C O doub N N 95 GLN C OXT sing N N 96 GLN CB CG sing N N 97 GLN CB HB2 sing N N 98 GLN CB HB3 sing N N 99 GLN CG CD sing N N 100 GLN CG HG2 sing N N 101 GLN CG HG3 sing N N 102 GLN CD OE1 doub N N 103 GLN CD NE2 sing N N 104 GLN NE2 HE21 sing N N 105 GLN NE2 HE22 sing N N 106 GLN OXT HXT sing N N 107 GLU N CA sing N N 108 GLU N H sing N N 109 GLU N H2 sing N N 110 GLU CA C sing N N 111 GLU CA CB sing N N 112 GLU CA HA sing N N 113 GLU C O doub N N 114 GLU C OXT sing N N 115 GLU CB CG sing N N 116 GLU CB HB2 sing N N 117 GLU CB HB3 sing N N 118 GLU CG CD sing N N 119 GLU CG HG2 sing N N 120 GLU CG HG3 sing N N 121 GLU CD OE1 doub N N 122 GLU CD OE2 sing N N 123 GLU OE2 HE2 sing N N 124 GLU OXT HXT sing N N 125 GLY N CA sing N N 126 GLY N H sing N N 127 GLY N H2 sing N N 128 GLY CA C sing N N 129 GLY CA HA2 sing N N 130 GLY CA HA3 sing N N 131 GLY C O doub N N 132 GLY C OXT sing N N 133 GLY OXT HXT sing N N 134 HIS N CA sing N N 135 HIS N H sing N N 136 HIS N H2 sing N N 137 HIS CA C sing N N 138 HIS CA CB sing N N 139 HIS CA HA sing N N 140 HIS C O doub N N 141 HIS C OXT sing N N 142 HIS CB CG sing N N 143 HIS CB HB2 sing N N 144 HIS CB HB3 sing N N 145 HIS CG ND1 sing Y N 146 HIS CG CD2 doub Y N 147 HIS ND1 CE1 doub Y N 148 HIS ND1 HD1 sing N N 149 HIS CD2 NE2 sing Y N 150 HIS CD2 HD2 sing N N 151 HIS CE1 NE2 sing Y N 152 HIS CE1 HE1 sing N N 153 HIS NE2 HE2 sing N N 154 HIS OXT HXT sing N N 155 HOH O H1 sing N N 156 HOH O H2 sing N N 157 ILE N CA sing N N 158 ILE N H sing N N 159 ILE N H2 sing N N 160 ILE CA C sing N N 161 ILE CA CB sing N N 162 ILE CA HA sing N N 163 ILE C O doub N N 164 ILE C OXT sing N N 165 ILE CB CG1 sing N N 166 ILE CB CG2 sing N N 167 ILE CB HB sing N N 168 ILE CG1 CD1 sing N N 169 ILE CG1 HG12 sing N N 170 ILE CG1 HG13 sing N N 171 ILE CG2 HG21 sing N N 172 ILE CG2 HG22 sing N N 173 ILE CG2 HG23 sing N N 174 ILE CD1 HD11 sing N N 175 ILE CD1 HD12 sing N N 176 ILE CD1 HD13 sing N N 177 ILE OXT HXT sing N N 178 LEU N CA sing N N 179 LEU N H sing N N 180 LEU N H2 sing N N 181 LEU CA C sing N N 182 LEU CA CB sing N N 183 LEU CA HA sing N N 184 LEU C O doub N N 185 LEU C OXT sing N N 186 LEU CB CG sing N N 187 LEU CB HB2 sing N N 188 LEU CB HB3 sing N N 189 LEU CG CD1 sing N N 190 LEU CG CD2 sing N N 191 LEU CG HG sing N N 192 LEU CD1 HD11 sing N N 193 LEU CD1 HD12 sing N N 194 LEU CD1 HD13 sing N N 195 LEU CD2 HD21 sing N N 196 LEU CD2 HD22 sing N N 197 LEU CD2 HD23 sing N N 198 LEU OXT HXT sing N N 199 LYS N CA sing N N 200 LYS N H sing N N 201 LYS N H2 sing N N 202 LYS CA C sing N N 203 LYS CA CB sing N N 204 LYS CA HA sing N N 205 LYS C O doub N N 206 LYS C OXT sing N N 207 LYS CB CG sing N N 208 LYS CB HB2 sing N N 209 LYS CB HB3 sing N N 210 LYS CG CD sing N N 211 LYS CG HG2 sing N N 212 LYS CG HG3 sing N N 213 LYS CD CE sing N N 214 LYS CD HD2 sing N N 215 LYS CD HD3 sing N N 216 LYS CE NZ sing N N 217 LYS CE HE2 sing N N 218 LYS CE HE3 sing N N 219 LYS NZ HZ1 sing N N 220 LYS NZ HZ2 sing N N 221 LYS NZ HZ3 sing N N 222 LYS OXT HXT sing N N 223 MET N CA sing N N 224 MET N H sing N N 225 MET N H2 sing N N 226 MET CA C sing N N 227 MET CA CB sing N N 228 MET CA HA sing N N 229 MET C O doub N N 230 MET C OXT sing N N 231 MET CB CG sing N N 232 MET CB HB2 sing N N 233 MET CB HB3 sing N N 234 MET CG SD sing N N 235 MET CG HG2 sing N N 236 MET CG HG3 sing N N 237 MET SD CE sing N N 238 MET CE HE1 sing N N 239 MET CE HE2 sing N N 240 MET CE HE3 sing N N 241 MET OXT HXT sing N N 242 PHE N CA sing N N 243 PHE N H sing N N 244 PHE N H2 sing N N 245 PHE CA C sing N N 246 PHE CA CB sing N N 247 PHE CA HA sing N N 248 PHE C O doub N N 249 PHE C OXT sing N N 250 PHE CB CG sing N N 251 PHE CB HB2 sing N N 252 PHE CB HB3 sing N N 253 PHE CG CD1 doub Y N 254 PHE CG CD2 sing Y N 255 PHE CD1 CE1 sing Y N 256 PHE CD1 HD1 sing N N 257 PHE CD2 CE2 doub Y N 258 PHE CD2 HD2 sing N N 259 PHE CE1 CZ doub Y N 260 PHE CE1 HE1 sing N N 261 PHE CE2 CZ sing Y N 262 PHE CE2 HE2 sing N N 263 PHE CZ HZ sing N N 264 PHE OXT HXT sing N N 265 PRO N CA sing N N 266 PRO N CD sing N N 267 PRO N H sing N N 268 PRO CA C sing N N 269 PRO CA CB sing N N 270 PRO CA HA sing N N 271 PRO C O doub N N 272 PRO C OXT sing N N 273 PRO CB CG sing N N 274 PRO CB HB2 sing N N 275 PRO CB HB3 sing N N 276 PRO CG CD sing N N 277 PRO CG HG2 sing N N 278 PRO CG HG3 sing N N 279 PRO CD HD2 sing N N 280 PRO CD HD3 sing N N 281 PRO OXT HXT sing N N 282 SER N CA sing N N 283 SER N H sing N N 284 SER N H2 sing N N 285 SER CA C sing N N 286 SER CA CB sing N N 287 SER CA HA sing N N 288 SER C O doub N N 289 SER C OXT sing N N 290 SER CB OG sing N N 291 SER CB HB2 sing N N 292 SER CB HB3 sing N N 293 SER OG HG sing N N 294 SER OXT HXT sing N N 295 THR N CA sing N N 296 THR N H sing N N 297 THR N H2 sing N N 298 THR CA C sing N N 299 THR CA CB sing N N 300 THR CA HA sing N N 301 THR C O doub N N 302 THR C OXT sing N N 303 THR CB OG1 sing N N 304 THR CB CG2 sing N N 305 THR CB HB sing N N 306 THR OG1 HG1 sing N N 307 THR CG2 HG21 sing N N 308 THR CG2 HG22 sing N N 309 THR CG2 HG23 sing N N 310 THR OXT HXT sing N N 311 TRP N CA sing N N 312 TRP N H sing N N 313 TRP N H2 sing N N 314 TRP CA C sing N N 315 TRP CA CB sing N N 316 TRP CA HA sing N N 317 TRP C O doub N N 318 TRP C OXT sing N N 319 TRP CB CG sing N N 320 TRP CB HB2 sing N N 321 TRP CB HB3 sing N N 322 TRP CG CD1 doub Y N 323 TRP CG CD2 sing Y N 324 TRP CD1 NE1 sing Y N 325 TRP CD1 HD1 sing N N 326 TRP CD2 CE2 doub Y N 327 TRP CD2 CE3 sing Y N 328 TRP NE1 CE2 sing Y N 329 TRP NE1 HE1 sing N N 330 TRP CE2 CZ2 sing Y N 331 TRP CE3 CZ3 doub Y N 332 TRP CE3 HE3 sing N N 333 TRP CZ2 CH2 doub Y N 334 TRP CZ2 HZ2 sing N N 335 TRP CZ3 CH2 sing Y N 336 TRP CZ3 HZ3 sing N N 337 TRP CH2 HH2 sing N N 338 TRP OXT HXT sing N N 339 TYR N CA sing N N 340 TYR N H sing N N 341 TYR N H2 sing N N 342 TYR CA C sing N N 343 TYR CA CB sing N N 344 TYR CA HA sing N N 345 TYR C O doub N N 346 TYR C OXT sing N N 347 TYR CB CG sing N N 348 TYR CB HB2 sing N N 349 TYR CB HB3 sing N N 350 TYR CG CD1 doub Y N 351 TYR CG CD2 sing Y N 352 TYR CD1 CE1 sing Y N 353 TYR CD1 HD1 sing N N 354 TYR CD2 CE2 doub Y N 355 TYR CD2 HD2 sing N N 356 TYR CE1 CZ doub Y N 357 TYR CE1 HE1 sing N N 358 TYR CE2 CZ sing Y N 359 TYR CE2 HE2 sing N N 360 TYR CZ OH sing N N 361 TYR OH HH sing N N 362 TYR OXT HXT sing N N 363 VAL N CA sing N N 364 VAL N H sing N N 365 VAL N H2 sing N N 366 VAL CA C sing N N 367 VAL CA CB sing N N 368 VAL CA HA sing N N 369 VAL C O doub N N 370 VAL C OXT sing N N 371 VAL CB CG1 sing N N 372 VAL CB CG2 sing N N 373 VAL CB HB sing N N 374 VAL CG1 HG11 sing N N 375 VAL CG1 HG12 sing N N 376 VAL CG1 HG13 sing N N 377 VAL CG2 HG21 sing N N 378 VAL CG2 HG22 sing N N 379 VAL CG2 HG23 sing N N 380 VAL OXT HXT sing N N 381 # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number GM115568 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 'ACETATE ION' ACT 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4MDK _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #