HEADER APOPTOSIS 16-FEB-19 6O0L TITLE CRYSTAL STRUCTURE OF BCL-2 G101V MUTATION WITH VENETOCLAX COMPND MOL_ID: 1; COMPND 2 MOLECULE: APOPTOSIS REGULATOR BCL-2,BCL-2-LIKE PROTEIN 1,APOPTOSIS COMPND 3 REGULATOR BCL-2; COMPND 4 CHAIN: A, C; COMPND 5 SYNONYM: BCL2-L-1,APOPTOSIS REGULATOR BCL-X; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BCL2, BCL2L1, BCL2L, BCLX; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 KEYWDS BCL-2, VENETOCLAX, COMPLEX, PROTEIN-PROTEIN INTERFACE INHIBITOR, KEYWDS 2 RESISTANCE MUTATION, FDA APPROVED DRUG COMPLEX, APOPTOSIS EXPDTA X-RAY DIFFRACTION AUTHOR R.W.BIRKINSHAW,C.S.LUO,P.M.COLMAN,P.E.CZABOTAR REVDAT 6 11-OCT-23 6O0L 1 COMPND HETNAM HETSYN REVDAT 5 11-DEC-19 6O0L 1 HETSYN REVDAT 4 20-NOV-19 6O0L 1 COMPND HETNAM FORMUL REVDAT 3 10-JUL-19 6O0L 1 COMPND SOURCE DBREF SEQADV REVDAT 2 19-JUN-19 6O0L 1 JRNL REVDAT 1 22-MAY-19 6O0L 0 JRNL AUTH R.W.BIRKINSHAW,J.N.GONG,C.S.LUO,D.LIO,C.A.WHITE, JRNL AUTH 2 M.A.ANDERSON,P.BLOMBERY,G.LESSENE,I.J.MAJEWSKI,R.THIJSSEN, JRNL AUTH 3 A.W.ROBERTS,D.C.S.HUANG,P.M.COLMAN,P.E.CZABOTAR JRNL TITL STRUCTURES OF BCL-2 IN COMPLEX WITH VENETOCLAX REVEAL THE JRNL TITL 2 MOLECULAR BASIS OF RESISTANCE MUTATIONS. JRNL REF NAT COMMUN V. 10 2385 2019 JRNL REFN ESSN 2041-1723 JRNL PMID 31160589 JRNL DOI 10.1038/S41467-019-10363-1 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.51 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 12924 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.860 REMARK 3 FREE R VALUE TEST SET COUNT : 628 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.5190 - 3.4919 1.00 3121 155 0.1762 0.2041 REMARK 3 2 3.4919 - 2.7717 1.00 3054 158 0.2059 0.2154 REMARK 3 3 2.7717 - 2.4214 1.00 3095 159 0.2182 0.2920 REMARK 3 4 2.4214 - 2.2000 1.00 3026 156 0.2353 0.2787 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.340 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 2550 REMARK 3 ANGLE : 0.589 3449 REMARK 3 CHIRALITY : 0.038 334 REMARK 3 PLANARITY : 0.003 505 REMARK 3 DIHEDRAL : 18.466 1505 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 9 THROUGH 90 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.2479 7.2737 -5.3664 REMARK 3 T TENSOR REMARK 3 T11: 0.3344 T22: 0.3400 REMARK 3 T33: 0.2133 T12: -0.0092 REMARK 3 T13: -0.0656 T23: -0.0210 REMARK 3 L TENSOR REMARK 3 L11: 3.8090 L22: 6.1047 REMARK 3 L33: 2.4332 L12: -0.3261 REMARK 3 L13: 0.7418 L23: -0.5194 REMARK 3 S TENSOR REMARK 3 S11: 0.1771 S12: 0.4439 S13: -0.2963 REMARK 3 S21: -1.0320 S22: 0.2988 S23: -0.1479 REMARK 3 S31: 0.0642 S32: 0.0586 S33: 0.0930 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 91 THROUGH 107 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.6490 3.2669 -5.0880 REMARK 3 T TENSOR REMARK 3 T11: 0.6027 T22: 0.4206 REMARK 3 T33: 0.2157 T12: -0.1655 REMARK 3 T13: -0.0976 T23: 0.0829 REMARK 3 L TENSOR REMARK 3 L11: 4.3850 L22: 3.6291 REMARK 3 L33: 4.7690 L12: 2.2120 REMARK 3 L13: 3.0025 L23: -0.1722 REMARK 3 S TENSOR REMARK 3 S11: 0.0795 S12: 0.8164 S13: -0.3613 REMARK 3 S21: -0.3519 S22: 0.1691 S23: -0.0911 REMARK 3 S31: 1.1246 S32: 0.0287 S33: -0.4966 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 108 THROUGH 117 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.3031 19.4970 -5.6781 REMARK 3 T TENSOR REMARK 3 T11: 0.6627 T22: 0.9200 REMARK 3 T33: 0.5580 T12: -0.2248 REMARK 3 T13: -0.2422 T23: 0.1463 REMARK 3 L TENSOR REMARK 3 L11: 8.2951 L22: 4.7725 REMARK 3 L33: 3.6344 L12: 6.2242 REMARK 3 L13: -5.3592 L23: -4.1540 REMARK 3 S TENSOR REMARK 3 S11: 0.5597 S12: -0.6487 S13: -0.1045 REMARK 3 S21: 0.9529 S22: -0.2340 S23: -0.0977 REMARK 3 S31: -0.2328 S32: 0.1774 S33: -0.7316 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 118 THROUGH 203 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.9757 13.6087 4.0071 REMARK 3 T TENSOR REMARK 3 T11: 0.2752 T22: 0.2197 REMARK 3 T33: 0.1604 T12: 0.0033 REMARK 3 T13: -0.0514 T23: 0.0117 REMARK 3 L TENSOR REMARK 3 L11: 3.4963 L22: 4.4856 REMARK 3 L33: 3.6884 L12: 2.1552 REMARK 3 L13: -1.2569 L23: -1.8068 REMARK 3 S TENSOR REMARK 3 S11: 0.0757 S12: -0.0248 S13: 0.2609 REMARK 3 S21: 0.0121 S22: 0.0423 S23: 0.2914 REMARK 3 S31: -0.2136 S32: 0.0058 S33: -0.1039 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 8 THROUGH 90 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.2728 37.0448 18.5847 REMARK 3 T TENSOR REMARK 3 T11: 0.4071 T22: 0.4030 REMARK 3 T33: 0.2829 T12: 0.0435 REMARK 3 T13: -0.0472 T23: 0.0015 REMARK 3 L TENSOR REMARK 3 L11: 3.3195 L22: 6.2783 REMARK 3 L33: 3.8076 L12: 1.1681 REMARK 3 L13: -1.2793 L23: 1.9208 REMARK 3 S TENSOR REMARK 3 S11: -0.0383 S12: 0.3794 S13: 0.2960 REMARK 3 S21: -0.8625 S22: 0.1371 S23: 0.0797 REMARK 3 S31: 0.1750 S32: -0.7281 S33: 0.0562 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 91 THROUGH 107 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.2653 40.8833 18.6098 REMARK 3 T TENSOR REMARK 3 T11: 0.5095 T22: 0.4285 REMARK 3 T33: 0.3098 T12: -0.1638 REMARK 3 T13: 0.0373 T23: 0.0380 REMARK 3 L TENSOR REMARK 3 L11: 6.6553 L22: 4.7351 REMARK 3 L33: 7.5730 L12: -1.0930 REMARK 3 L13: -4.8840 L23: 4.1487 REMARK 3 S TENSOR REMARK 3 S11: -0.2229 S12: 1.0357 S13: 0.7811 REMARK 3 S21: -0.8855 S22: 0.3675 S23: -0.2476 REMARK 3 S31: -0.9613 S32: 0.1756 S33: -0.8028 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 108 THROUGH 117 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.9519 24.7179 17.9498 REMARK 3 T TENSOR REMARK 3 T11: 0.8272 T22: 0.8687 REMARK 3 T33: 0.4928 T12: 0.0736 REMARK 3 T13: 0.1285 T23: -0.3370 REMARK 3 L TENSOR REMARK 3 L11: 0.5340 L22: 1.0236 REMARK 3 L33: 1.3204 L12: 0.1186 REMARK 3 L13: -0.3319 L23: 0.6865 REMARK 3 S TENSOR REMARK 3 S11: 0.0918 S12: -0.1489 S13: 0.1130 REMARK 3 S21: 0.2347 S22: 0.0676 S23: -0.1701 REMARK 3 S31: 0.3800 S32: 0.2134 S33: 0.9681 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 118 THROUGH 143 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.2094 22.5434 29.3811 REMARK 3 T TENSOR REMARK 3 T11: 0.3731 T22: 0.2877 REMARK 3 T33: 0.3973 T12: 0.0295 REMARK 3 T13: -0.0920 T23: -0.0396 REMARK 3 L TENSOR REMARK 3 L11: 4.5499 L22: 2.8032 REMARK 3 L33: 6.3474 L12: 2.7276 REMARK 3 L13: 2.0088 L23: 2.3679 REMARK 3 S TENSOR REMARK 3 S11: 0.3670 S12: 0.2827 S13: -0.8606 REMARK 3 S21: 0.8069 S22: 0.4779 S23: -0.7723 REMARK 3 S31: 0.8037 S32: 0.2250 S33: -0.5902 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 144 THROUGH 203 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.8089 33.9406 27.0697 REMARK 3 T TENSOR REMARK 3 T11: 0.2805 T22: 0.2647 REMARK 3 T33: 0.1677 T12: 0.0085 REMARK 3 T13: 0.0183 T23: 0.0132 REMARK 3 L TENSOR REMARK 3 L11: 4.6277 L22: 5.5927 REMARK 3 L33: 4.2495 L12: 3.5222 REMARK 3 L13: 2.7365 L23: 2.1242 REMARK 3 S TENSOR REMARK 3 S11: -0.0123 S12: 0.0182 S13: -0.0839 REMARK 3 S21: -0.1777 S22: 0.1392 S23: -0.0272 REMARK 3 S31: -0.1538 S32: -0.0022 S33: -0.1526 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: AUTHORS STATE THAT THE DATA WERE REMARK 3 PROCESSED AND REFINED IN SPACEGROUP P21, DESPITE BEING POSSIBLE REMARK 3 TO MERGE AND REFINE IN ORTHORHOMBIC SPACEGROUP P212121. THIS WAS REMARK 3 DUE TO POORER REFINEMENT STATISTICS IN THE ORTHORHOMBIC REMARK 3 SPACEGROUP. REMARK 4 REMARK 4 6O0L COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-FEB-19. REMARK 100 THE DEPOSITION ID IS D_1000239798. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-JUL-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : DOUBLE-CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12909 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 47.510 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.560 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6O0G REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 26.09 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.66 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 4% PEG4K, 35% PEG400, 0.08M MES PH REMARK 280 6.0, VAPOR DIFFUSION, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 41.00250 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 HIS A 3 REMARK 465 ALA A 4 REMARK 465 GLY A 5 REMARK 465 ARG A 6 REMARK 465 THR A 7 REMARK 465 GLY A 8 REMARK 465 ASP A 75 REMARK 465 ASP A 76 REMARK 465 VAL A 77 REMARK 465 GLU A 78 REMARK 465 GLU A 79 REMARK 465 ASN A 80 REMARK 465 ARG A 81 REMARK 465 THR A 82 REMARK 465 GLU A 83 REMARK 465 ALA A 84 REMARK 465 PRO A 85 REMARK 465 GLU A 86 REMARK 465 GLY A 87 REMARK 465 THR A 88 REMARK 465 GLU A 89 REMARK 465 PRO A 204 REMARK 465 SER A 205 REMARK 465 MET A 206 REMARK 465 ARG A 207 REMARK 465 MET C 1 REMARK 465 ALA C 2 REMARK 465 HIS C 3 REMARK 465 ALA C 4 REMARK 465 GLY C 5 REMARK 465 ARG C 6 REMARK 465 THR C 7 REMARK 465 ASP C 75 REMARK 465 ASP C 76 REMARK 465 VAL C 77 REMARK 465 GLU C 78 REMARK 465 GLU C 79 REMARK 465 ASN C 80 REMARK 465 ARG C 81 REMARK 465 THR C 82 REMARK 465 GLU C 83 REMARK 465 ALA C 84 REMARK 465 PRO C 85 REMARK 465 GLU C 86 REMARK 465 GLY C 87 REMARK 465 THR C 88 REMARK 465 GLU C 89 REMARK 465 PRO C 204 REMARK 465 SER C 205 REMARK 465 MET C 206 REMARK 465 ARG C 207 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue LBM A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue LBM C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG C 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG C 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL C 304 DBREF 6O0L A 1 75 UNP P10415 BCL2_HUMAN 1 34 DBREF 6O0L A 76 91 UNP Q07817 B2CL1_HUMAN 29 44 DBREF 6O0L A 92 207 UNP P10415 BCL2_HUMAN 92 207 DBREF 6O0L C 1 75 UNP P10415 BCL2_HUMAN 1 34 DBREF 6O0L C 76 91 UNP Q07817 B2CL1_HUMAN 29 44 DBREF 6O0L C 92 207 UNP P10415 BCL2_HUMAN 92 207 SEQADV 6O0L VAL A 101 UNP P10415 GLY 101 ENGINEERED MUTATION SEQADV 6O0L VAL C 101 UNP P10415 GLY 101 ENGINEERED MUTATION SEQRES 1 A 166 MET ALA HIS ALA GLY ARG THR GLY TYR ASP ASN ARG GLU SEQRES 2 A 166 ILE VAL MET LYS TYR ILE HIS TYR LYS LEU SER GLN ARG SEQRES 3 A 166 GLY TYR GLU TRP ASP ALA GLY ASP ASP VAL GLU GLU ASN SEQRES 4 A 166 ARG THR GLU ALA PRO GLU GLY THR GLU SER GLU VAL VAL SEQRES 5 A 166 HIS LEU THR LEU ARG GLN ALA VAL ASP ASP PHE SER ARG SEQRES 6 A 166 ARG TYR ARG ARG ASP PHE ALA GLU MET SER SER GLN LEU SEQRES 7 A 166 HIS LEU THR PRO PHE THR ALA ARG GLY ARG PHE ALA THR SEQRES 8 A 166 VAL VAL GLU GLU LEU PHE ARG ASP GLY VAL ASN TRP GLY SEQRES 9 A 166 ARG ILE VAL ALA PHE PHE GLU PHE GLY GLY VAL MET CYS SEQRES 10 A 166 VAL GLU SER VAL ASN ARG GLU MET SER PRO LEU VAL ASP SEQRES 11 A 166 ASN ILE ALA LEU TRP MET THR GLU TYR LEU ASN ARG HIS SEQRES 12 A 166 LEU HIS THR TRP ILE GLN ASP ASN GLY GLY TRP ASP ALA SEQRES 13 A 166 PHE VAL GLU LEU TYR GLY PRO SER MET ARG SEQRES 1 C 166 MET ALA HIS ALA GLY ARG THR GLY TYR ASP ASN ARG GLU SEQRES 2 C 166 ILE VAL MET LYS TYR ILE HIS TYR LYS LEU SER GLN ARG SEQRES 3 C 166 GLY TYR GLU TRP ASP ALA GLY ASP ASP VAL GLU GLU ASN SEQRES 4 C 166 ARG THR GLU ALA PRO GLU GLY THR GLU SER GLU VAL VAL SEQRES 5 C 166 HIS LEU THR LEU ARG GLN ALA VAL ASP ASP PHE SER ARG SEQRES 6 C 166 ARG TYR ARG ARG ASP PHE ALA GLU MET SER SER GLN LEU SEQRES 7 C 166 HIS LEU THR PRO PHE THR ALA ARG GLY ARG PHE ALA THR SEQRES 8 C 166 VAL VAL GLU GLU LEU PHE ARG ASP GLY VAL ASN TRP GLY SEQRES 9 C 166 ARG ILE VAL ALA PHE PHE GLU PHE GLY GLY VAL MET CYS SEQRES 10 C 166 VAL GLU SER VAL ASN ARG GLU MET SER PRO LEU VAL ASP SEQRES 11 C 166 ASN ILE ALA LEU TRP MET THR GLU TYR LEU ASN ARG HIS SEQRES 12 C 166 LEU HIS THR TRP ILE GLN ASP ASN GLY GLY TRP ASP ALA SEQRES 13 C 166 PHE VAL GLU LEU TYR GLY PRO SER MET ARG HET LBM A 301 61 HET PEG A 302 7 HET PEG A 303 7 HET CL A 304 1 HET LBM C 301 61 HET PEG C 302 7 HET PEG C 303 7 HET CL C 304 1 HETNAM LBM 4-{4-[(4'-CHLORO-5,5-DIMETHYL[3,4,5,6-TETRAHYDRO[1,1'- HETNAM 2 LBM BIPHENYL]]-2-YL)METHYL]PIPERAZIN-1-YL}-N-[(3-NITRO-4- HETNAM 3 LBM {[(OXAN-4-YL )METHYL]AMINO}PHENYL)SULFONYL]-2-[(1H- HETNAM 4 LBM PYRROLO[2,3-B]PYRIDIN-5-YL)OXY]BENZAMIDE HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM CL CHLORIDE ION HETSYN LBM VENETOCLAX, 2-((1H-PYRROLO[2,3-B]PYRIDIN-5-YL)OXY)-4- HETSYN 2 LBM (4-((4'-CHLORO-5,5-DIMETHYL-3,4,5,6-TETRAHYDRO-[1,1'- HETSYN 3 LBM BIPHENYL]-2-YL)METHYL)PIPE RAZIN-1-YL)-N-((3-NITRO-4- HETSYN 4 LBM (((TETRAHYDRO-2H-PYRAN-4-YL)METHYL)AMINO)PHENYL) HETSYN 5 LBM SULFONYL)BENZAMIDE FORMUL 3 LBM 2(C45 H50 CL N7 O7 S) FORMUL 4 PEG 4(C4 H10 O3) FORMUL 6 CL 2(CL 1-) FORMUL 11 HOH *22(H2 O) HELIX 1 AA1 ASP A 10 GLN A 25 1 16 HELIX 2 AA2 GLU A 91 TYR A 108 1 18 HELIX 3 AA3 TYR A 108 GLN A 118 1 11 HELIX 4 AA4 THR A 125 PHE A 138 1 14 HELIX 5 AA5 ASN A 143 ARG A 164 1 22 HELIX 6 AA6 SER A 167 HIS A 184 1 18 HELIX 7 AA7 LEU A 185 ASN A 192 1 8 HELIX 8 AA8 GLY A 193 GLY A 203 1 11 HELIX 9 AA9 ASP C 10 GLN C 25 1 16 HELIX 10 AB1 GLU C 91 TYR C 108 1 18 HELIX 11 AB2 TYR C 108 GLN C 118 1 11 HELIX 12 AB3 THR C 125 PHE C 138 1 14 HELIX 13 AB4 ASN C 143 ARG C 164 1 22 HELIX 14 AB5 SER C 167 HIS C 184 1 18 HELIX 15 AB6 LEU C 185 ASN C 192 1 8 HELIX 16 AB7 GLY C 193 GLY C 203 1 11 SITE 1 AC1 17 ARG A 12 ALA A 100 ASP A 103 ARG A 107 SITE 2 AC1 17 TYR A 108 LEU A 137 TRP A 144 GLY A 145 SITE 3 AC1 17 VAL A 148 ALA A 149 GLU A 152 PHE A 153 SITE 4 AC1 17 VAL A 156 PHE A 198 TYR A 202 PEG A 303 SITE 5 AC1 17 HOH A 403 SITE 1 AC2 3 ARG A 12 MET A 16 PEG A 303 SITE 1 AC3 5 ASN A 143 THR A 178 LBM A 301 PEG A 302 SITE 2 AC3 5 CL A 304 SITE 1 AC4 4 GLU A 179 ASN A 182 ARG A 183 PEG A 303 SITE 1 AC5 19 ARG C 12 ALA C 100 ASP C 103 ARG C 107 SITE 2 AC5 19 TYR C 108 GLU C 136 LEU C 137 TRP C 144 SITE 3 AC5 19 GLY C 145 VAL C 148 ALA C 149 GLU C 152 SITE 4 AC5 19 PHE C 153 VAL C 156 PHE C 198 TYR C 202 SITE 5 AC5 19 PEG C 303 HOH C 401 HOH C 404 SITE 1 AC6 2 ARG C 12 PEG C 303 SITE 1 AC7 6 ARG C 12 ASN C 143 ARG C 146 LBM C 301 SITE 2 AC7 6 PEG C 302 CL C 304 SITE 1 AC8 4 GLU C 179 ASN C 182 ARG C 183 PEG C 303 CRYST1 33.147 82.005 47.508 90.00 90.08 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.030169 0.000000 0.000043 0.00000 SCALE2 0.000000 0.012194 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021049 0.00000