HEADER APOPTOSIS 17-FEB-19 6O0O TITLE CRYSTAL STRUCTURE OF BCL-2 G101V MUTATION WITH S55746 COMPND MOL_ID: 1; COMPND 2 MOLECULE: APOPTOSIS REGULATOR BCL-2,BCL-2-LIKE PROTEIN 1,APOPTOSIS COMPND 3 REGULATOR BCL-2; COMPND 4 CHAIN: A, C; COMPND 5 SYNONYM: BCL2-L-1,APOPTOSIS REGULATOR BCL-X; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BCL2, BCL2L1, BCL2L, BCLX; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 KEYWDS BCL-2, S55746, COMPLEX, PROTEIN-PROTEIN INTERFACE INHIBITOR, KEYWDS 2 RESISTANCE MUTATION, APOPTOSIS EXPDTA X-RAY DIFFRACTION AUTHOR R.W.BIRKINSHAW,C.S.LUO,P.M.COLMAN,P.E.CZABOTAR REVDAT 4 11-OCT-23 6O0O 1 REMARK REVDAT 3 10-JUL-19 6O0O 1 COMPND SOURCE DBREF SEQADV REVDAT 2 19-JUN-19 6O0O 1 JRNL REVDAT 1 22-MAY-19 6O0O 0 JRNL AUTH R.W.BIRKINSHAW,J.N.GONG,C.S.LUO,D.LIO,C.A.WHITE, JRNL AUTH 2 M.A.ANDERSON,P.BLOMBERY,G.LESSENE,I.J.MAJEWSKI,R.THIJSSEN, JRNL AUTH 3 A.W.ROBERTS,D.C.S.HUANG,P.M.COLMAN,P.E.CZABOTAR JRNL TITL STRUCTURES OF BCL-2 IN COMPLEX WITH VENETOCLAX REVEAL THE JRNL TITL 2 MOLECULAR BASIS OF RESISTANCE MUTATIONS. JRNL REF NAT COMMUN V. 10 2385 2019 JRNL REFN ESSN 2041-1723 JRNL PMID 31160589 JRNL DOI 10.1038/S41467-019-10363-1 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.43 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 74.3 REMARK 3 NUMBER OF REFLECTIONS : 16500 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.219 REMARK 3 R VALUE (WORKING SET) : 0.217 REMARK 3 FREE R VALUE : 0.267 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.950 REMARK 3 FREE R VALUE TEST SET COUNT : 816 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.4359 - 3.6298 1.00 3569 189 0.1824 0.2193 REMARK 3 2 3.6298 - 2.8814 1.00 3499 185 0.2349 0.2878 REMARK 3 3 2.8814 - 2.5173 0.96 3362 176 0.2649 0.3550 REMARK 3 4 2.5173 - 2.2872 0.72 2533 129 0.2591 0.3189 REMARK 3 5 2.2872 - 2.1232 0.51 1780 95 0.2793 0.3655 REMARK 3 6 2.1232 - 1.9981 0.27 941 42 0.2936 0.4024 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.300 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 42.250 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 2471 REMARK 3 ANGLE : 0.543 3353 REMARK 3 CHIRALITY : 0.038 327 REMARK 3 PLANARITY : 0.004 507 REMARK 3 DIHEDRAL : 13.999 1463 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 9 THROUGH 50 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.3349 5.8981 11.2590 REMARK 3 T TENSOR REMARK 3 T11: 0.8213 T22: 0.3347 REMARK 3 T33: 0.2966 T12: -0.1926 REMARK 3 T13: -0.0382 T23: 0.0376 REMARK 3 L TENSOR REMARK 3 L11: 1.6656 L22: 1.8838 REMARK 3 L33: 3.2050 L12: -0.1732 REMARK 3 L13: 0.4971 L23: -1.9728 REMARK 3 S TENSOR REMARK 3 S11: -0.0139 S12: -0.0414 S13: 0.2867 REMARK 3 S21: 0.8516 S22: -0.0651 S23: 0.1352 REMARK 3 S31: -0.7917 S32: -0.0163 S33: -0.0892 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 51 THROUGH 66 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.9032 8.9583 6.4604 REMARK 3 T TENSOR REMARK 3 T11: 0.7715 T22: 0.3371 REMARK 3 T33: 0.2229 T12: 0.2288 REMARK 3 T13: 0.2519 T23: 0.0435 REMARK 3 L TENSOR REMARK 3 L11: 2.3841 L22: 0.8130 REMARK 3 L33: 1.3638 L12: 0.6135 REMARK 3 L13: -1.0329 L23: 0.1518 REMARK 3 S TENSOR REMARK 3 S11: 0.2917 S12: -0.2656 S13: 0.3502 REMARK 3 S21: 0.2369 S22: 0.0627 S23: 0.1923 REMARK 3 S31: -0.5173 S32: -0.1320 S33: 2.3863 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 67 THROUGH 77 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.2627 -6.2165 10.8434 REMARK 3 T TENSOR REMARK 3 T11: 0.5808 T22: 1.1147 REMARK 3 T33: 1.0042 T12: 0.0497 REMARK 3 T13: 0.1859 T23: 0.2587 REMARK 3 L TENSOR REMARK 3 L11: 2.3711 L22: 2.2285 REMARK 3 L33: 3.4591 L12: 0.2999 REMARK 3 L13: 1.5841 L23: -2.0683 REMARK 3 S TENSOR REMARK 3 S11: 0.3579 S12: 0.1407 S13: -0.4840 REMARK 3 S21: 0.1961 S22: -0.1102 S23: -0.6518 REMARK 3 S31: 0.0527 S32: -0.0936 S33: -0.1001 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 78 THROUGH 102 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.5565 -10.3357 2.1359 REMARK 3 T TENSOR REMARK 3 T11: 0.5113 T22: 0.3211 REMARK 3 T33: 0.2265 T12: -0.0650 REMARK 3 T13: -0.0688 T23: 0.0092 REMARK 3 L TENSOR REMARK 3 L11: 2.1707 L22: 3.7079 REMARK 3 L33: 5.7134 L12: -1.3113 REMARK 3 L13: 2.2199 L23: -4.1367 REMARK 3 S TENSOR REMARK 3 S11: -0.1761 S12: 0.2406 S13: 0.0525 REMARK 3 S21: -0.8025 S22: 0.2362 S23: 0.4824 REMARK 3 S31: 0.5223 S32: -0.1283 S33: -0.3059 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 103 THROUGH 162 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.4565 0.8011 2.3879 REMARK 3 T TENSOR REMARK 3 T11: 0.3202 T22: 0.2172 REMARK 3 T33: 0.1300 T12: -0.0365 REMARK 3 T13: 0.0211 T23: 0.0321 REMARK 3 L TENSOR REMARK 3 L11: 1.0274 L22: 1.8776 REMARK 3 L33: 3.7052 L12: -0.1073 REMARK 3 L13: 0.1934 L23: -1.7525 REMARK 3 S TENSOR REMARK 3 S11: 0.1734 S12: -0.1218 S13: 0.1316 REMARK 3 S21: 0.1229 S22: 0.0216 S23: 0.1257 REMARK 3 S31: 0.0346 S32: 0.0383 S33: -0.0921 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 10 THROUGH 50 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.0846 -36.7333 21.0507 REMARK 3 T TENSOR REMARK 3 T11: 0.0266 T22: 0.2195 REMARK 3 T33: 0.4024 T12: 0.1108 REMARK 3 T13: 0.0423 T23: -0.0722 REMARK 3 L TENSOR REMARK 3 L11: 0.1825 L22: 0.7013 REMARK 3 L33: 1.0148 L12: 0.0858 REMARK 3 L13: 0.3291 L23: -0.3874 REMARK 3 S TENSOR REMARK 3 S11: -0.1227 S12: -0.4099 S13: -0.2551 REMARK 3 S21: -0.0701 S22: 0.1718 S23: -0.3615 REMARK 3 S31: 0.3572 S32: 0.5121 S33: 0.6839 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 51 THROUGH 66 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.9635 -39.9776 34.1526 REMARK 3 T TENSOR REMARK 3 T11: 0.4208 T22: 0.2705 REMARK 3 T33: 0.5209 T12: 0.0245 REMARK 3 T13: -0.2176 T23: 0.0666 REMARK 3 L TENSOR REMARK 3 L11: 3.5734 L22: 5.9727 REMARK 3 L33: 2.3975 L12: -3.3748 REMARK 3 L13: -1.5300 L23: 0.3454 REMARK 3 S TENSOR REMARK 3 S11: -0.3656 S12: -0.3686 S13: -0.5689 REMARK 3 S21: 0.7056 S22: 0.1356 S23: 0.3357 REMARK 3 S31: -0.4435 S32: -0.1811 S33: -0.0449 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 67 THROUGH 77 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.7083 -24.9055 36.1925 REMARK 3 T TENSOR REMARK 3 T11: 1.1385 T22: 0.8652 REMARK 3 T33: 0.5667 T12: 0.1430 REMARK 3 T13: 0.0673 T23: 0.1097 REMARK 3 L TENSOR REMARK 3 L11: 1.3954 L22: 1.6081 REMARK 3 L33: 2.2193 L12: 0.1406 REMARK 3 L13: 0.2520 L23: -1.8103 REMARK 3 S TENSOR REMARK 3 S11: 0.5251 S12: 0.3109 S13: -0.2761 REMARK 3 S21: 0.4736 S22: 0.4318 S23: 0.2352 REMARK 3 S31: 0.0270 S32: 0.0669 S33: -0.2469 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 78 THROUGH 122 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.0207 -24.6614 31.3940 REMARK 3 T TENSOR REMARK 3 T11: 0.4587 T22: 0.3443 REMARK 3 T33: 0.3532 T12: 0.0721 REMARK 3 T13: -0.2128 T23: -0.0117 REMARK 3 L TENSOR REMARK 3 L11: 0.7267 L22: 0.9648 REMARK 3 L33: 2.1473 L12: -0.3313 REMARK 3 L13: 0.9041 L23: -1.3161 REMARK 3 S TENSOR REMARK 3 S11: -0.1030 S12: -0.1729 S13: 0.1325 REMARK 3 S21: 1.0880 S22: 0.1804 S23: -0.3758 REMARK 3 S31: -0.5330 S32: -0.1164 S33: 0.2796 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 123 THROUGH 162 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.0954 -33.1483 29.7811 REMARK 3 T TENSOR REMARK 3 T11: 0.2240 T22: 0.2965 REMARK 3 T33: 0.4055 T12: 0.0733 REMARK 3 T13: -0.1013 T23: -0.0333 REMARK 3 L TENSOR REMARK 3 L11: 0.6995 L22: 1.3507 REMARK 3 L33: 2.1917 L12: -0.7995 REMARK 3 L13: 1.2415 L23: -1.4625 REMARK 3 S TENSOR REMARK 3 S11: 0.1640 S12: 0.3347 S13: -0.1590 REMARK 3 S21: -0.0848 S22: -0.2488 S23: -0.4728 REMARK 3 S31: 0.3996 S32: 0.5412 S33: 0.0836 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: AUTHORS STATE THAT THE DIFFRACTION DATA REMARK 3 WERE ELLIPSOIDALLY TRUNCATED AFTER 2.7 ANGSTROM. TWO COPIES OF REMARK 3 BCL-2 AND S55746 ARE PRESENT IN THE ASSYMETRIC UNIT. THE MODEL REMARK 3 FROM CHAIN A IS THE PREFERRED CHAIN FOR ANALYSIS AS THE ELECTRON REMARK 3 DENSITY FOR CHAIN C IS OF POORER QUALITY. REMARK 4 REMARK 4 6O0O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-FEB-19. REMARK 100 THE DEPOSITION ID IS D_1000239801. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-DEC-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : DOUBLE-CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22155 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.998 REMARK 200 RESOLUTION RANGE LOW (A) : 37.430 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 74.3 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.2900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 21.2 REMARK 200 DATA REDUNDANCY IN SHELL : 6.60 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4LVT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.34 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M NACL 0.1M SUCCINIC ACID-NAOH REMARK 280 PH5.0 10% PEG200, VAPOR DIFFUSION, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 34.29200 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 HIS A 3 REMARK 465 ALA A 4 REMARK 465 GLY A 5 REMARK 465 ARG A 6 REMARK 465 THR A 7 REMARK 465 GLY A 8 REMARK 465 GLY A 33 REMARK 465 ASP A 34 REMARK 465 ASP A 35 REMARK 465 VAL A 36 REMARK 465 GLU A 37 REMARK 465 GLU A 38 REMARK 465 ASN A 39 REMARK 465 ARG A 40 REMARK 465 THR A 41 REMARK 465 GLU A 42 REMARK 465 ALA A 43 REMARK 465 PRO A 44 REMARK 465 GLU A 45 REMARK 465 GLY A 46 REMARK 465 THR A 47 REMARK 465 GLU A 48 REMARK 465 SER A 49 REMARK 465 PRO A 163 REMARK 465 SER A 164 REMARK 465 MET A 165 REMARK 465 ARG A 166 REMARK 465 MET C 1 REMARK 465 ALA C 2 REMARK 465 HIS C 3 REMARK 465 ALA C 4 REMARK 465 GLY C 5 REMARK 465 ARG C 6 REMARK 465 THR C 7 REMARK 465 GLY C 8 REMARK 465 TYR C 9 REMARK 465 GLY C 33 REMARK 465 ASP C 34 REMARK 465 ASP C 35 REMARK 465 VAL C 36 REMARK 465 GLU C 37 REMARK 465 GLU C 38 REMARK 465 ASN C 39 REMARK 465 ARG C 40 REMARK 465 THR C 41 REMARK 465 GLU C 42 REMARK 465 ALA C 43 REMARK 465 PRO C 44 REMARK 465 GLU C 45 REMARK 465 GLY C 46 REMARK 465 THR C 47 REMARK 465 GLU C 48 REMARK 465 SER C 49 REMARK 465 PRO C 163 REMARK 465 SER C 164 REMARK 465 MET C 165 REMARK 465 ARG C 166 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 50 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER C 64 OE2 GLU C 111 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS C 143 -50.57 -126.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue F3Q A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue F3Q C 201 DBREF 6O0O A 1 34 UNP P10415 BCL2_HUMAN 1 34 DBREF 6O0O A 35 50 UNP Q07817 B2CL1_HUMAN 29 44 DBREF 6O0O A 51 166 UNP P10415 BCL2_HUMAN 92 207 DBREF 6O0O C 1 34 UNP P10415 BCL2_HUMAN 1 34 DBREF 6O0O C 35 50 UNP Q07817 B2CL1_HUMAN 29 44 DBREF 6O0O C 51 166 UNP P10415 BCL2_HUMAN 92 207 SEQADV 6O0O VAL A 60 UNP P10415 GLY 101 ENGINEERED MUTATION SEQADV 6O0O VAL C 60 UNP P10415 GLY 101 ENGINEERED MUTATION SEQRES 1 A 166 MET ALA HIS ALA GLY ARG THR GLY TYR ASP ASN ARG GLU SEQRES 2 A 166 ILE VAL MET LYS TYR ILE HIS TYR LYS LEU SER GLN ARG SEQRES 3 A 166 GLY TYR GLU TRP ASP ALA GLY ASP ASP VAL GLU GLU ASN SEQRES 4 A 166 ARG THR GLU ALA PRO GLU GLY THR GLU SER GLU VAL VAL SEQRES 5 A 166 HIS LEU THR LEU ARG GLN ALA VAL ASP ASP PHE SER ARG SEQRES 6 A 166 ARG TYR ARG ARG ASP PHE ALA GLU MET SER SER GLN LEU SEQRES 7 A 166 HIS LEU THR PRO PHE THR ALA ARG GLY ARG PHE ALA THR SEQRES 8 A 166 VAL VAL GLU GLU LEU PHE ARG ASP GLY VAL ASN TRP GLY SEQRES 9 A 166 ARG ILE VAL ALA PHE PHE GLU PHE GLY GLY VAL MET CYS SEQRES 10 A 166 VAL GLU SER VAL ASN ARG GLU MET SER PRO LEU VAL ASP SEQRES 11 A 166 ASN ILE ALA LEU TRP MET THR GLU TYR LEU ASN ARG HIS SEQRES 12 A 166 LEU HIS THR TRP ILE GLN ASP ASN GLY GLY TRP ASP ALA SEQRES 13 A 166 PHE VAL GLU LEU TYR GLY PRO SER MET ARG SEQRES 1 C 166 MET ALA HIS ALA GLY ARG THR GLY TYR ASP ASN ARG GLU SEQRES 2 C 166 ILE VAL MET LYS TYR ILE HIS TYR LYS LEU SER GLN ARG SEQRES 3 C 166 GLY TYR GLU TRP ASP ALA GLY ASP ASP VAL GLU GLU ASN SEQRES 4 C 166 ARG THR GLU ALA PRO GLU GLY THR GLU SER GLU VAL VAL SEQRES 5 C 166 HIS LEU THR LEU ARG GLN ALA VAL ASP ASP PHE SER ARG SEQRES 6 C 166 ARG TYR ARG ARG ASP PHE ALA GLU MET SER SER GLN LEU SEQRES 7 C 166 HIS LEU THR PRO PHE THR ALA ARG GLY ARG PHE ALA THR SEQRES 8 C 166 VAL VAL GLU GLU LEU PHE ARG ASP GLY VAL ASN TRP GLY SEQRES 9 C 166 ARG ILE VAL ALA PHE PHE GLU PHE GLY GLY VAL MET CYS SEQRES 10 C 166 VAL GLU SER VAL ASN ARG GLU MET SER PRO LEU VAL ASP SEQRES 11 C 166 ASN ILE ALA LEU TRP MET THR GLU TYR LEU ASN ARG HIS SEQRES 12 C 166 LEU HIS THR TRP ILE GLN ASP ASN GLY GLY TRP ASP ALA SEQRES 13 C 166 PHE VAL GLU LEU TYR GLY PRO SER MET ARG HET F3Q A 201 53 HET F3Q C 201 53 HETNAM F3Q ~{N}-(4-HYDROXYPHENYL)-3-[6-[[(3~{S})-3-(MORPHOLIN-4- HETNAM 2 F3Q YLMETHYL)-3,4-DIHYDRO-1~{H}-ISOQUINOLIN-2- HETNAM 3 F3Q YL]CARBONYL]-1,3-BENZODIOXOL-5-YL]-~{N}-PHENYL-5,6,7, HETNAM 4 F3Q 8-TETRAHYDROINDOLIZINE-1-CARBOXAMIDE FORMUL 3 F3Q 2(C43 H42 N4 O6) FORMUL 5 HOH *15(H2 O) HELIX 1 AA1 ASP A 10 ARG A 26 1 17 HELIX 2 AA2 VAL A 51 TYR A 67 1 17 HELIX 3 AA3 TYR A 67 LEU A 78 1 12 HELIX 4 AA4 THR A 84 PHE A 97 1 14 HELIX 5 AA5 ASN A 102 ARG A 123 1 22 HELIX 6 AA6 PRO A 127 LEU A 144 1 18 HELIX 7 AA7 LEU A 144 ASN A 151 1 8 HELIX 8 AA8 GLY A 153 TYR A 161 1 9 HELIX 9 AA9 ASN C 11 GLN C 25 1 15 HELIX 10 AB1 VAL C 51 TYR C 67 1 17 HELIX 11 AB2 TYR C 67 SER C 76 1 10 HELIX 12 AB3 THR C 84 PHE C 97 1 14 HELIX 13 AB4 ASN C 102 ARG C 123 1 22 HELIX 14 AB5 PRO C 127 HIS C 143 1 17 HELIX 15 AB6 LEU C 144 ASN C 151 1 8 HELIX 16 AB7 GLY C 153 TYR C 161 1 9 SITE 1 AC1 13 PHE A 63 TYR A 67 ASP A 70 PHE A 71 SITE 2 AC1 13 MET A 74 ARG A 88 VAL A 92 GLU A 95 SITE 3 AC1 13 LEU A 96 GLY A 104 ARG A 105 ALA A 108 SITE 4 AC1 13 PHE A 112 SITE 1 AC2 12 PHE C 63 TYR C 67 ASP C 70 MET C 74 SITE 2 AC2 12 VAL C 92 GLU C 95 LEU C 96 GLY C 104 SITE 3 AC2 12 ARG C 105 ALA C 108 GLU C 111 PHE C 112 CRYST1 37.684 68.584 64.489 90.00 96.67 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026536 0.000000 0.003101 0.00000 SCALE2 0.000000 0.014581 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015612 0.00000