HEADER IMMUNE SYSTEM 22-FEB-19 6O24 TITLE CRYSTAL STRUCTURE OF 4498 FAB IN COMPLEX WITH CIRCUMSPOROZOITE PROTEIN TITLE 2 NANP3 AND ANTI-KAPPA VHH DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: 4498 FAB HEAVY CHAIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: 4498 KAPPA LIGHT CHAIN; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: ANTI-KAPPA VHH DOMAIN; COMPND 11 CHAIN: K; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 4; COMPND 14 MOLECULE: CIRCUMSPOROZOITE PROTEIN; COMPND 15 CHAIN: I; COMPND 16 FRAGMENT: RESIDUES 148-159; COMPND 17 SYNONYM: CS; COMPND 18 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 13 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: LAMA GLAMA; SOURCE 17 ORGANISM_COMMON: LLAMA; SOURCE 18 ORGANISM_TAXID: 9844; SOURCE 19 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 20 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 21 MOL_ID: 4; SOURCE 22 SYNTHETIC: YES; SOURCE 23 ORGANISM_SCIENTIFIC: PLASMODIUM FALCIPARUM; SOURCE 24 ORGANISM_TAXID: 5833 KEYWDS MALARIA, ANTIBODY, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR S.W.SCALLY,A.BOSCH,K.PRIETO,R.MURUGAN,H.WARDEMANN,J.P.JULIEN REVDAT 4 23-OCT-24 6O24 1 REMARK REVDAT 3 03-APR-24 6O24 1 REMARK REVDAT 2 29-JUL-20 6O24 1 JRNL REVDAT 1 01-JUL-20 6O24 0 JRNL AUTH R.MURUGAN,S.W.SCALLY,G.COSTA,G.MUSTAFA,E.THAI,T.DECKER, JRNL AUTH 2 A.BOSCH,K.PRIETO,E.A.LEVASHINA,J.P.JULIEN,H.WARDEMANN JRNL TITL EVOLUTION OF PROTECTIVE HUMAN ANTIBODIES AGAINST PLASMODIUM JRNL TITL 2 FALCIPARUM CIRCUMSPOROZOITE PROTEIN REPEAT MOTIFS. JRNL REF NAT. MED. V. 26 1135 2020 JRNL REFN ISSN 1546-170X JRNL PMID 32451496 JRNL DOI 10.1038/S41591-020-0881-9 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.97 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 117484 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.162 REMARK 3 R VALUE (WORKING SET) : 0.161 REMARK 3 FREE R VALUE : 0.186 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.710 REMARK 3 FREE R VALUE TEST SET COUNT : 2010 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.9680 - 3.3692 1.00 8402 145 0.1306 0.1452 REMARK 3 2 3.3692 - 2.6763 1.00 8281 143 0.1560 0.1988 REMARK 3 3 2.6763 - 2.3386 1.00 8264 143 0.1721 0.1861 REMARK 3 4 2.3386 - 2.1250 1.00 8223 146 0.1684 0.1974 REMARK 3 5 2.1250 - 1.9729 1.00 8252 141 0.1627 0.1896 REMARK 3 6 1.9729 - 1.8566 1.00 8272 145 0.1603 0.1731 REMARK 3 7 1.8566 - 1.7637 1.00 8242 148 0.1681 0.1923 REMARK 3 8 1.7637 - 1.6870 1.00 8212 143 0.1718 0.2020 REMARK 3 9 1.6870 - 1.6221 1.00 8236 143 0.1827 0.2055 REMARK 3 10 1.6221 - 1.5661 1.00 8247 145 0.1890 0.2396 REMARK 3 11 1.5661 - 1.5172 1.00 8226 145 0.2033 0.2246 REMARK 3 12 1.5172 - 1.4738 1.00 8215 139 0.2290 0.2728 REMARK 3 13 1.4738 - 1.4350 1.00 8220 139 0.2458 0.3008 REMARK 3 14 1.4350 - 1.4000 1.00 8182 145 0.2664 0.2967 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.130 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.36 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 113 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.5819 -7.9963 6.0085 REMARK 3 T TENSOR REMARK 3 T11: 0.1808 T22: 0.1459 REMARK 3 T33: 0.2239 T12: -0.0026 REMARK 3 T13: -0.0704 T23: -0.0104 REMARK 3 L TENSOR REMARK 3 L11: 1.2839 L22: 2.9125 REMARK 3 L33: 1.3661 L12: 0.7944 REMARK 3 L13: 0.2353 L23: -0.9632 REMARK 3 S TENSOR REMARK 3 S11: 0.0981 S12: -0.0176 S13: -0.0556 REMARK 3 S21: -0.1530 S22: -0.0434 S23: 0.2211 REMARK 3 S31: 0.1306 S32: -0.0913 S33: -0.0464 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 114 THROUGH 216 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.1098 11.0389 7.8977 REMARK 3 T TENSOR REMARK 3 T11: 0.1379 T22: 0.1388 REMARK 3 T33: 0.0984 T12: 0.0091 REMARK 3 T13: 0.0061 T23: -0.0016 REMARK 3 L TENSOR REMARK 3 L11: 2.6035 L22: 1.4293 REMARK 3 L33: 3.1425 L12: 0.1088 REMARK 3 L13: 0.6338 L23: -0.0452 REMARK 3 S TENSOR REMARK 3 S11: -0.1258 S12: -0.0666 S13: 0.0167 REMARK 3 S21: 0.0491 S22: 0.0523 S23: -0.1188 REMARK 3 S31: 0.0434 S32: 0.2752 S33: 0.0568 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 107 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.6166 -5.4467 27.0047 REMARK 3 T TENSOR REMARK 3 T11: 0.1371 T22: 0.1766 REMARK 3 T33: 0.1739 T12: -0.0230 REMARK 3 T13: 0.0111 T23: -0.0234 REMARK 3 L TENSOR REMARK 3 L11: 2.5918 L22: 1.1961 REMARK 3 L33: 2.0022 L12: 0.2020 REMARK 3 L13: 1.4696 L23: -0.0819 REMARK 3 S TENSOR REMARK 3 S11: 0.0425 S12: -0.2335 S13: 0.0669 REMARK 3 S21: 0.0832 S22: -0.0469 S23: 0.2506 REMARK 3 S31: 0.0676 S32: -0.2779 S33: -0.0038 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 108 THROUGH 214 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.6856 20.7972 18.6975 REMARK 3 T TENSOR REMARK 3 T11: 0.1485 T22: 0.1487 REMARK 3 T33: 0.1169 T12: 0.0162 REMARK 3 T13: 0.0000 T23: -0.0015 REMARK 3 L TENSOR REMARK 3 L11: 0.4956 L22: 2.5952 REMARK 3 L33: 2.9175 L12: 0.5835 REMARK 3 L13: -0.1937 L23: -1.7988 REMARK 3 S TENSOR REMARK 3 S11: -0.0268 S12: 0.0330 S13: 0.0340 REMARK 3 S21: -0.1470 S22: 0.0044 S23: 0.0145 REMARK 3 S31: -0.1193 S32: 0.0316 S33: 0.0284 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'K' AND (RESID 1 THROUGH 113 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.9545 15.9341 46.9621 REMARK 3 T TENSOR REMARK 3 T11: 0.1344 T22: 0.1598 REMARK 3 T33: 0.1238 T12: 0.0056 REMARK 3 T13: 0.0061 T23: 0.0114 REMARK 3 L TENSOR REMARK 3 L11: 1.0396 L22: 1.3056 REMARK 3 L33: 2.3972 L12: -0.2756 REMARK 3 L13: 0.5035 L23: -0.4055 REMARK 3 S TENSOR REMARK 3 S11: -0.0392 S12: 0.0036 S13: 0.0821 REMARK 3 S21: 0.0751 S22: -0.0050 S23: 0.0081 REMARK 3 S31: -0.1665 S32: -0.0391 S33: 0.0458 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'I' AND (RESID 2 THROUGH 12 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.1286 -14.8025 12.5576 REMARK 3 T TENSOR REMARK 3 T11: 0.2416 T22: 0.2730 REMARK 3 T33: 0.5231 T12: -0.0906 REMARK 3 T13: -0.0832 T23: -0.0376 REMARK 3 L TENSOR REMARK 3 L11: 4.3684 L22: 2.3430 REMARK 3 L33: 9.4012 L12: -1.0060 REMARK 3 L13: -1.1592 L23: 4.6488 REMARK 3 S TENSOR REMARK 3 S11: -0.0310 S12: -0.1273 S13: -0.5640 REMARK 3 S21: 0.2076 S22: -0.0605 S23: 1.3524 REMARK 3 S31: 0.5580 S32: -0.5040 S33: 0.0021 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6O24 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-FEB-19. REMARK 100 THE DEPOSITION ID IS D_1000239699. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-JUL-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 2.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS-II REMARK 200 BEAMLINE : 17-ID-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979341 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 117560 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.07800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.80 REMARK 200 R MERGE FOR SHELL (I) : 0.62500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: INTERNAL FAB MODEL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.51 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10 % (W/V) 2-METHYL-2,4-PENTANEDIOL, REMARK 280 0.1 M CITRIC ACID PH 2.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 38.39250 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, K, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN I 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN K 3 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 45 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 LEU B 78 CB - CG - CD1 ANGL. DEV. = -11.5 DEGREES REMARK 500 ARG B 142 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ASP K 72 CB - CG - OD1 ANGL. DEV. = 7.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 55 -80.56 -74.86 REMARK 500 ASP A 144 52.10 73.53 REMARK 500 SER A 215 64.81 -118.35 REMARK 500 SER B 30 -124.48 50.67 REMARK 500 ALA B 51 -38.11 73.49 REMARK 500 TRP B 94 -146.29 57.14 REMARK 500 UNK K 26 -32.01 101.94 REMARK 500 UNK K 54 -12.55 97.91 REMARK 500 UNK K 56 173.52 92.47 REMARK 500 UNK K 100B 46.60 81.89 REMARK 500 ASN I 11 66.44 66.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CIT B 302 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6O23 RELATED DB: PDB DBREF 6O24 A 1 216 PDB 6O24 6O24 1 216 DBREF 6O24 B 1 214 PDB 6O24 6O24 1 214 DBREF 6O24 K 1 113 PDB 6O24 6O24 1 113 DBREF 6O24 I 1 12 UNP P02893 CSP_PLAFA 148 159 SEQRES 1 A 230 PCA VAL GLN LEU VAL GLU SER GLY GLY GLY VAL VAL GLN SEQRES 2 A 230 PRO GLY ARG SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 A 230 PHE THR PHE SER ILE TYR GLY MET HIS TRP VAL ARG GLN SEQRES 4 A 230 ALA PRO GLY LYS GLY LEU GLU TRP VAL ALA LEU ILE TRP SEQRES 5 A 230 TYR ASP GLY THR ASN LYS TYR TYR THR ASP SER VAL LYS SEQRES 6 A 230 GLY ARG PHE THR ILE SER ARG ASP ASN SER LYS ASN THR SEQRES 7 A 230 LEU PHE LEU GLN MET ASN SER VAL ARG ALA GLU ASP THR SEQRES 8 A 230 ALA VAL TYR TYR CYS ALA ARG ASP ALA HIS TYR SER ASP SEQRES 9 A 230 SER SER GLY TYR SER SER TRP GLY TYR PHE ASP TYR TRP SEQRES 10 A 230 GLY GLN GLY SER LEU VAL THR VAL SER SER ALA SER THR SEQRES 11 A 230 LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SER SER LYS SEQRES 12 A 230 SER THR SER GLY GLY THR ALA ALA LEU GLY CYS LEU VAL SEQRES 13 A 230 LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SER TRP ASN SEQRES 14 A 230 SER GLY ALA LEU THR SER GLY VAL HIS THR PHE PRO ALA SEQRES 15 A 230 VAL LEU GLN SER SER GLY LEU TYR SER LEU SER SER VAL SEQRES 16 A 230 VAL THR VAL PRO SER SER SER LEU GLY THR GLN THR TYR SEQRES 17 A 230 ILE CYS ASN VAL ASN HIS LYS PRO SER ASN THR LYS VAL SEQRES 18 A 230 ASP LYS ARG VAL GLU PRO LYS SER CYS SEQRES 1 B 213 GLU ILE VAL LEU THR GLN SER PRO ALA THR LEU SER LEU SEQRES 2 B 213 SER PRO GLY GLU ARG ALA THR LEU SER CYS ARG ALA SER SEQRES 3 B 213 GLN SER VAL SER SER TYR LEU ALA TRP TYR GLN GLN LYS SEQRES 4 B 213 PRO GLY GLN ALA PRO ARG LEU LEU ILE PHE ASP ALA SER SEQRES 5 B 213 ILE ARG ALA THR GLY ILE PRO ALA ARG PHE SER GLY SER SEQRES 6 B 213 GLY SER GLY THR ASP PHE THR LEU THR ILE SER SER LEU SEQRES 7 B 213 GLU PRO GLU ASP PHE ALA VAL TYR TYR CYS GLN GLN ARG SEQRES 8 B 213 SER ASN TRP TYR THR PHE GLY GLN GLY THR LYS LEU GLU SEQRES 9 B 213 ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE PHE SEQRES 10 B 213 PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SER SEQRES 11 B 213 VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU ALA SEQRES 12 B 213 LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER GLY SEQRES 13 B 213 ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS ASP SEQRES 14 B 213 SER THR TYR SER LEU SER SER THR LEU THR LEU SER LYS SEQRES 15 B 213 ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU VAL SEQRES 16 B 213 THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER PHE SEQRES 17 B 213 ASN ARG GLY GLU CYS SEQRES 1 K 121 UNK VAL GLN LEU UNK UNK SER GLY GLY GLY UNK VAL GLN SEQRES 2 K 121 UNK GLY UNK SER LEU UNK LEU SER CYS UNK ALA UNK UNK SEQRES 3 K 121 UNK UNK UNK UNK UNK UNK UNK UNK UNK TRP UNK ARG GLN SEQRES 4 K 121 UNK PRO GLY UNK UNK ARG GLU UNK VAL UNK UNK UNK UNK SEQRES 5 K 121 UNK UNK UNK UNK UNK UNK UNK UNK UNK ASP SER UNK UNK SEQRES 6 K 121 GLY ARG PHE THR UNK SER UNK ASP UNK UNK UNK UNK UNK SEQRES 7 K 121 UNK UNK LEU GLN UNK UNK UNK LEU UNK UNK UNK ASP UNK SEQRES 8 K 121 ALA UNK TYR TYR CYS UNK UNK UNK UNK UNK UNK UNK UNK SEQRES 9 K 121 UNK UNK UNK UNK UNK UNK TRP GLY UNK GLY THR UNK VAL SEQRES 10 K 121 THR VAL SER SER SEQRES 1 I 12 ASN ALA ASN PRO ASN ALA ASN PRO ASN ALA ASN PRO HET PCA A 1 8 HET EDO A 301 4 HET EDO A 302 4 HET EDO B 301 4 HET CIT B 302 13 HET EDO K 201 4 HETNAM PCA PYROGLUTAMIC ACID HETNAM EDO 1,2-ETHANEDIOL HETNAM CIT CITRIC ACID HETSYN EDO ETHYLENE GLYCOL FORMUL 1 PCA C5 H7 N O3 FORMUL 5 EDO 4(C2 H6 O2) FORMUL 8 CIT C6 H8 O7 FORMUL 10 HOH *675(H2 O) HELIX 1 AA1 THR A 28 TYR A 32 5 5 HELIX 2 AA2 ASN A 73 LYS A 75 5 3 HELIX 3 AA3 ARG A 83 THR A 87 5 5 HELIX 4 AA4 SER A 127 LYS A 129 5 3 HELIX 5 AA5 SER A 156 ALA A 158 5 3 HELIX 6 AA6 SER A 187 LEU A 189 5 3 HELIX 7 AA7 LYS A 201 ASN A 204 5 4 HELIX 8 AA8 GLU B 79 PHE B 83 5 5 HELIX 9 AA9 SER B 121 SER B 127 1 7 HELIX 10 AB1 LYS B 183 GLU B 187 1 5 HELIX 11 AB2 UNK K 73 UNK K 75 5 3 HELIX 12 AB3 UNK K 83 UNK K 87 5 5 SHEET 1 AA1 4 GLN A 3 SER A 7 0 SHEET 2 AA1 4 LEU A 18 SER A 25 -1 O ALA A 23 N VAL A 5 SHEET 3 AA1 4 THR A 77 MET A 82 -1 O LEU A 80 N LEU A 20 SHEET 4 AA1 4 PHE A 67 ASP A 72 -1 N THR A 68 O GLN A 81 SHEET 1 AA2 6 GLY A 10 VAL A 12 0 SHEET 2 AA2 6 SER A 107 VAL A 111 1 O THR A 110 N VAL A 12 SHEET 3 AA2 6 ALA A 88 ASP A 95 -1 N TYR A 90 O SER A 107 SHEET 4 AA2 6 MET A 34 GLN A 39 -1 N VAL A 37 O TYR A 91 SHEET 5 AA2 6 LEU A 45 ILE A 51 -1 O GLU A 46 N ARG A 38 SHEET 6 AA2 6 LYS A 57 TYR A 59 -1 O TYR A 58 N LEU A 50 SHEET 1 AA3 4 GLY A 10 VAL A 12 0 SHEET 2 AA3 4 SER A 107 VAL A 111 1 O THR A 110 N VAL A 12 SHEET 3 AA3 4 ALA A 88 ASP A 95 -1 N TYR A 90 O SER A 107 SHEET 4 AA3 4 PHE A 100J TRP A 103 -1 O TYR A 102 N ARG A 94 SHEET 1 AA4 2 TYR A 98 SER A 99 0 SHEET 2 AA4 2 SER A 100E SER A 100F-1 O SER A 100F N TYR A 98 SHEET 1 AA5 4 SER A 120 LEU A 124 0 SHEET 2 AA5 4 THR A 135 TYR A 145 -1 O GLY A 139 N LEU A 124 SHEET 3 AA5 4 TYR A 176 PRO A 185 -1 O LEU A 178 N VAL A 142 SHEET 4 AA5 4 VAL A 163 THR A 165 -1 N HIS A 164 O VAL A 181 SHEET 1 AA6 4 THR A 131 SER A 132 0 SHEET 2 AA6 4 THR A 135 TYR A 145 -1 O THR A 135 N SER A 132 SHEET 3 AA6 4 TYR A 176 PRO A 185 -1 O LEU A 178 N VAL A 142 SHEET 4 AA6 4 VAL A 169 LEU A 170 -1 N VAL A 169 O SER A 177 SHEET 1 AA7 3 THR A 151 TRP A 154 0 SHEET 2 AA7 3 ILE A 195 HIS A 200 -1 O ASN A 197 N SER A 153 SHEET 3 AA7 3 THR A 205 ARG A 210 -1 O VAL A 207 N VAL A 198 SHEET 1 AA8 4 LEU B 4 SER B 7 0 SHEET 2 AA8 4 ALA B 19 ALA B 25 -1 O ARG B 24 N THR B 5 SHEET 3 AA8 4 ASP B 70 ILE B 75 -1 O LEU B 73 N LEU B 21 SHEET 4 AA8 4 PHE B 62 SER B 67 -1 N SER B 63 O THR B 74 SHEET 1 AA9 6 THR B 10 LEU B 13 0 SHEET 2 AA9 6 THR B 102 ILE B 106 1 O LYS B 103 N LEU B 11 SHEET 3 AA9 6 ALA B 84 GLN B 90 -1 N ALA B 84 O LEU B 104 SHEET 4 AA9 6 LEU B 33 GLN B 38 -1 N TYR B 36 O TYR B 87 SHEET 5 AA9 6 ARG B 45 PHE B 49 -1 O LEU B 47 N TRP B 35 SHEET 6 AA9 6 ILE B 53 ARG B 54 -1 O ILE B 53 N PHE B 49 SHEET 1 AB1 4 THR B 10 LEU B 13 0 SHEET 2 AB1 4 THR B 102 ILE B 106 1 O LYS B 103 N LEU B 11 SHEET 3 AB1 4 ALA B 84 GLN B 90 -1 N ALA B 84 O LEU B 104 SHEET 4 AB1 4 THR B 97 PHE B 98 -1 O THR B 97 N GLN B 90 SHEET 1 AB2 4 SER B 114 PHE B 118 0 SHEET 2 AB2 4 THR B 129 PHE B 139 -1 O ASN B 137 N SER B 114 SHEET 3 AB2 4 TYR B 173 SER B 182 -1 O SER B 177 N CYS B 134 SHEET 4 AB2 4 SER B 159 VAL B 163 -1 N SER B 162 O SER B 176 SHEET 1 AB3 4 ALA B 153 LEU B 154 0 SHEET 2 AB3 4 LYS B 145 VAL B 150 -1 N VAL B 150 O ALA B 153 SHEET 3 AB3 4 VAL B 191 THR B 197 -1 O GLU B 195 N GLN B 147 SHEET 4 AB3 4 VAL B 205 ASN B 210 -1 O VAL B 205 N VAL B 196 SHEET 1 AB4 4 GLN K 3 SER K 7 0 SHEET 2 AB4 4 LEU K 18 UNK K 25 -1 O UNK K 23 N UNK K 5 SHEET 3 AB4 4 UNK K 77 UNK K 82 -1 O UNK K 82 N LEU K 18 SHEET 4 AB4 4 PHE K 67 ASP K 72 -1 N THR K 68 O GLN K 81 SHEET 1 AB5 6 GLY K 10 VAL K 12 0 SHEET 2 AB5 6 THR K 107 VAL K 111 1 O THR K 110 N VAL K 12 SHEET 3 AB5 6 ALA K 88 UNK K 95 -1 N TYR K 90 O THR K 107 SHEET 4 AB5 6 UNK K 34 GLN K 39 -1 N UNK K 37 O TYR K 91 SHEET 5 AB5 6 GLU K 46 UNK K 51 -1 O GLU K 46 N ARG K 38 SHEET 6 AB5 6 UNK K 57 UNK K 59 -1 O UNK K 58 N UNK K 50 SHEET 1 AB6 4 GLY K 10 VAL K 12 0 SHEET 2 AB6 4 THR K 107 VAL K 111 1 O THR K 110 N VAL K 12 SHEET 3 AB6 4 ALA K 88 UNK K 95 -1 N TYR K 90 O THR K 107 SHEET 4 AB6 4 UNK K 100D TRP K 103 -1 O UNK K 102 N UNK K 94 SSBOND 1 CYS A 22 CYS A 92 1555 1555 2.13 SSBOND 2 CYS A 140 CYS A 196 1555 1555 2.06 SSBOND 3 CYS A 216 CYS B 214 1555 1555 2.05 SSBOND 4 CYS B 23 CYS B 88 1555 1555 2.20 SSBOND 5 CYS B 134 CYS B 194 1555 1555 2.10 SSBOND 6 CYS K 22 CYS K 92 1555 1555 2.10 LINK C PCA A 1 N VAL A 2 1555 1555 1.34 CISPEP 1 PHE A 146 PRO A 147 0 -6.81 CISPEP 2 GLU A 148 PRO A 149 0 0.47 CISPEP 3 SER B 7 PRO B 8 0 -9.69 CISPEP 4 TYR B 140 PRO B 141 0 0.70 SITE 1 AC1 5 TRP A 47 THR A 60 ASP A 61 HOH A 423 SITE 2 AC1 5 TRP B 94 SITE 1 AC2 5 HIS A 164 HOH A 429 HOH A 431 GLU B 165 SITE 2 AC2 5 ASP B 167 SITE 1 AC3 3 LYS B 39 GLN B 42 HOH B 419 SITE 1 AC4 9 TRP A 100G HOH A 521 TYR B 32 ARG B 91 SITE 2 AC4 9 SER B 92 HOH B 407 ASN I 3 ASN I 5 SITE 3 AC4 9 ALA I 6 CRYST1 62.998 76.785 63.657 90.00 98.94 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015874 0.000000 0.002499 0.00000 SCALE2 0.000000 0.013023 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015903 0.00000 HETATM 1 N PCA A 1 10.894 -24.250 12.187 1.00 25.25 N HETATM 2 CA PCA A 1 10.645 -24.217 10.775 1.00 22.57 C HETATM 3 CB PCA A 1 9.841 -25.431 10.321 1.00 26.97 C HETATM 4 CG PCA A 1 9.453 -26.170 11.570 1.00 31.16 C HETATM 5 CD PCA A 1 10.172 -25.424 12.656 1.00 44.91 C HETATM 6 OE PCA A 1 10.160 -25.768 13.841 1.00 57.17 O HETATM 7 C PCA A 1 9.913 -22.935 10.319 1.00 21.90 C HETATM 8 O PCA A 1 10.136 -22.649 9.148 1.00 24.40 O