HEADER IMMUNE SYSTEM 26-FEB-19 6O3D TITLE CRYSTAL STRUCTURE OF THE UNBOUND FAB FRAGMENT OF THE HUMAN HIV-1 TITLE 2 NEUTRALIZING ANTIBODY PGZL1. COMPND MOL_ID: 1; COMPND 2 MOLECULE: PGZL1 FAB LIGHT CHAIN; COMPND 3 CHAIN: L; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: PGZL1 FAB HEAVY CHAIN; COMPND 7 CHAIN: H; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 9606; SOURCE 4 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 6 EXPRESSION_SYSTEM_CELL_LINE: EXPI 293F; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_TAXID: 9606; SOURCE 11 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 13 EXPRESSION_SYSTEM_CELL_LINE: EXPI 293F; SOURCE 14 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS PGZL1 ANTI HIV-1, GP41 MPER, MEMBRANE LIPIDS, BROADLY NEUTRALISING KEYWDS 2 HIV-1 ANTIBODY, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR A.IRIMIA,I.A.WILSON REVDAT 4 06-NOV-24 6O3D 1 REMARK REVDAT 3 11-OCT-23 6O3D 1 REMARK REVDAT 2 11-DEC-19 6O3D 1 JRNL REVDAT 1 04-DEC-19 6O3D 0 JRNL AUTH L.ZHANG,A.IRIMIA,L.HE,E.LANDAIS,K.RANTALAINEN,D.P.LEAMAN, JRNL AUTH 2 T.VOLLBRECHT,A.STANO,D.I.SANDS,A.S.KIM,P.POIGNARD, JRNL AUTH 3 D.R.BURTON,B.MURRELL,A.B.WARD,J.ZHU,I.A.WILSON,M.B.ZWICK JRNL TITL AN MPER ANTIBODY NEUTRALIZES HIV-1 USING GERMLINE FEATURES JRNL TITL 2 SHARED AMONG DONORS. JRNL REF NAT COMMUN V. 10 5389 2019 JRNL REFN ESSN 2041-1723 JRNL PMID 31772165 JRNL DOI 10.1038/S41467-019-12973-1 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.12_2829: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.04 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.3 REMARK 3 NUMBER OF REFLECTIONS : 89715 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.148 REMARK 3 R VALUE (WORKING SET) : 0.146 REMARK 3 FREE R VALUE : 0.181 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4486 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.0477 - 4.3531 0.97 2949 155 0.1502 0.1673 REMARK 3 2 4.3531 - 3.4560 0.99 2969 156 0.1299 0.1418 REMARK 3 3 3.4560 - 3.0193 0.95 2860 151 0.1420 0.1743 REMARK 3 4 3.0193 - 2.7434 0.98 2940 154 0.1445 0.1513 REMARK 3 5 2.7434 - 2.5468 0.99 2941 155 0.1460 0.1886 REMARK 3 6 2.5468 - 2.3967 0.99 2942 155 0.1463 0.2140 REMARK 3 7 2.3967 - 2.2766 0.99 2976 157 0.1438 0.1786 REMARK 3 8 2.2766 - 2.1776 0.94 2754 145 0.1364 0.1916 REMARK 3 9 2.1776 - 2.0937 0.98 2927 155 0.1322 0.1808 REMARK 3 10 2.0937 - 2.0215 0.98 2942 154 0.1309 0.1698 REMARK 3 11 2.0215 - 1.9583 0.98 2921 154 0.1239 0.1439 REMARK 3 12 1.9583 - 1.9023 0.97 2869 151 0.1230 0.1678 REMARK 3 13 1.9023 - 1.8522 0.97 2918 153 0.1227 0.1541 REMARK 3 14 1.8522 - 1.8070 0.97 2873 152 0.1248 0.1852 REMARK 3 15 1.8070 - 1.7660 0.97 2923 153 0.1305 0.1831 REMARK 3 16 1.7660 - 1.7284 0.92 2738 144 0.1376 0.2189 REMARK 3 17 1.7284 - 1.6938 0.97 2888 152 0.1442 0.1820 REMARK 3 18 1.6938 - 1.6618 0.97 2869 151 0.1545 0.2268 REMARK 3 19 1.6618 - 1.6322 0.97 2909 154 0.1570 0.1937 REMARK 3 20 1.6322 - 1.6045 0.97 2868 151 0.1606 0.2216 REMARK 3 21 1.6045 - 1.5786 0.97 2864 151 0.1634 0.2199 REMARK 3 22 1.5786 - 1.5543 0.97 2846 149 0.1681 0.2252 REMARK 3 23 1.5543 - 1.5315 0.97 2956 156 0.1801 0.2218 REMARK 3 24 1.5315 - 1.5099 0.96 2853 149 0.1953 0.2542 REMARK 3 25 1.5099 - 1.4895 0.95 2799 148 0.2051 0.2647 REMARK 3 26 1.4895 - 1.4702 0.90 2694 141 0.2321 0.2464 REMARK 3 27 1.4702 - 1.4518 0.90 2705 143 0.2454 0.3077 REMARK 3 28 1.4518 - 1.4343 0.88 2583 136 0.2586 0.3074 REMARK 3 29 1.4343 - 1.4176 0.86 2576 136 0.2704 0.3030 REMARK 3 30 1.4176 - 1.4017 0.80 2377 125 0.2759 0.3117 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.000 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 17.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.015 3821 REMARK 3 ANGLE : 1.391 5246 REMARK 3 CHIRALITY : 0.116 579 REMARK 3 PLANARITY : 0.009 688 REMARK 3 DIHEDRAL : 20.742 1447 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6O3D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-FEB-19. REMARK 100 THE DEPOSITION ID IS D_1000239187. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-FEB-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97946 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 2.3.10 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 2.3.10 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 89730 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 37.048 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.4 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08200 REMARK 200 FOR THE DATA SET : 7.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 83.2 REMARK 200 DATA REDUNDANCY IN SHELL : 2.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.89100 REMARK 200 FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.3.10 REMARK 200 STARTING MODEL: 2FX7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.54 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: RESERVOIR: 20% PEG 4000, 20% GLYCEROL, REMARK 280 0.08 M SODIUM ACETATE PH 4.6, 0.16 M AMMONIUM SULFATE, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 43.79500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 48.01050 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 43.79500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 48.01050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5630 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 S SO4 H 301 LIES ON A SPECIAL POSITION. REMARK 375 HOH H 601 LIES ON A SPECIAL POSITION. REMARK 375 HOH H 608 LIES ON A SPECIAL POSITION. REMARK 375 HOH H 634 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 CYS L 214 REMARK 465 SER H 132 REMARK 465 THR H 133 REMARK 465 SER H 134 REMARK 465 GLY H 135 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP L 1 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS H 92 CA - CB - SG ANGL. DEV. = 10.4 DEGREES REMARK 500 CYS H 208 CA - CB - SG ANGL. DEV. = 9.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR L 51 -47.71 72.78 REMARK 500 ARG H 100E -42.42 69.43 REMARK 500 ASP H 146 57.34 70.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL L 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL L 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL L 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL L 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL L 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL L 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 H 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL H 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL H 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL H 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL H 305 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6O3G RELATED DB: PDB REMARK 900 RELATED ID: 6O3J RELATED DB: PDB REMARK 900 RELATED ID: 6O3K RELATED DB: PDB REMARK 900 RELATED ID: 6O3L RELATED DB: PDB REMARK 900 RELATED ID: 6O3U RELATED DB: PDB REMARK 900 RELATED ID: 6O41 RELATED DB: PDB REMARK 900 RELATED ID: 6O42 RELATED DB: PDB DBREF 6O3D L 1 214 PDB 6O3D 6O3D 1 214 DBREF 6O3D H 1 230 PDB 6O3D 6O3D 1 230 SEQRES 1 L 215 ASP VAL VAL MET THR GLN SER PRO GLY THR LEU SER LEU SEQRES 2 L 215 SER PRO GLY GLU ARG ALA THR LEU SER CYS ARG ALA SER SEQRES 3 L 215 GLN SER VAL SER GLY GLY ALA LEU ALA TRP TYR GLN GLN SEQRES 4 L 215 LYS PRO GLY GLN ALA PRO ARG LEU LEU ILE TYR ASP THR SEQRES 5 L 215 SER SER ARG PRO THR GLY VAL PRO GLY ARG PHE SER GLY SEQRES 6 L 215 SER GLY SER GLY THR ASP PHE SER LEU THR ILE SER ARG SEQRES 7 L 215 LEU GLU PRO GLU ASP PHE ALA VAL TYR TYR CYS GLN GLN SEQRES 8 L 215 TYR GLY THR SER GLN SER THR PHE GLY GLN GLY THR ARG SEQRES 9 L 215 LEU GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE SEQRES 10 L 215 ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR SEQRES 11 L 215 ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG SEQRES 12 L 215 GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SEQRES 13 L 215 SER GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER SEQRES 14 L 215 LYS ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SEQRES 15 L 215 SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS SEQRES 16 L 215 GLU VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SEQRES 17 L 215 SER PHE ASN ARG GLY GLU CYS SEQRES 1 H 227 GLU VAL GLN LEU VAL GLN SER GLY GLY GLU VAL LYS ARG SEQRES 2 H 227 PRO GLY SER SER VAL THR VAL SER CYS LYS ALA THR GLY SEQRES 3 H 227 GLY THR PHE SER THR LEU ALA PHE ASN TRP VAL ARG GLN SEQRES 4 H 227 ALA PRO GLY GLN GLY PRO GLU TRP MET GLY GLY ILE VAL SEQRES 5 H 227 PRO LEU PHE SER ILE VAL ASN TYR GLY GLN LYS PHE GLN SEQRES 6 H 227 GLY ARG LEU THR ILE ARG ALA ASP LYS SER THR THR THR SEQRES 7 H 227 VAL PHE LEU ASP LEU SER GLY LEU THR SER ALA ASP THR SEQRES 8 H 227 ALA THR TYR TYR CYS ALA ARG GLU GLY GLU GLY TRP PHE SEQRES 9 H 227 GLY LYS PRO LEU ARG ALA PHE GLU PHE TRP GLY GLN GLY SEQRES 10 H 227 THR VAL ILE THR VAL SER SER ALA SER THR LYS GLY PRO SEQRES 11 H 227 SER VAL PHE PRO LEU ALA PRO SER SER LYS SER THR SER SEQRES 12 H 227 GLY GLY THR ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR SEQRES 13 H 227 PHE PRO GLU PRO VAL THR VAL SER TRP ASN SER GLY ALA SEQRES 14 H 227 LEU THR SER GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SEQRES 15 H 227 SER SER GLY LEU TYR SER LEU SER SER VAL VAL THR VAL SEQRES 16 H 227 PRO SER SER SER LEU GLY THR GLN THR TYR ILE CYS ASN SEQRES 17 H 227 VAL ASN HIS LYS PRO SER ASN THR LYS VAL ASP LYS LYS SEQRES 18 H 227 VAL GLU PRO LYS SER CYS HET GOL L 301 6 HET GOL L 302 6 HET GOL L 303 6 HET GOL L 304 6 HET GOL L 305 12 HET GOL L 306 6 HET SO4 H 301 5 HET GOL H 302 6 HET GOL H 303 12 HET GOL H 304 6 HET GOL H 305 6 HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL 10(C3 H8 O3) FORMUL 9 SO4 O4 S 2- FORMUL 14 HOH *579(H2 O) HELIX 1 AA1 VAL L 28 GLY L 31 5 4 HELIX 2 AA2 GLU L 79 PHE L 83 5 5 HELIX 3 AA3 SER L 121 LYS L 126 1 6 HELIX 4 AA4 LYS L 183 LYS L 188 1 6 HELIX 5 AA5 PRO H 52A SER H 55 5 4 HELIX 6 AA6 GLN H 61 GLN H 64 5 4 HELIX 7 AA7 THR H 83 THR H 87 5 5 HELIX 8 AA8 TRP H 99 GLY H 100A 5 3 HELIX 9 AA9 SER H 163 ALA H 165 5 3 HELIX 10 AB1 SER H 196 LEU H 198 5 3 HELIX 11 AB2 LYS H 213 ASN H 216 5 4 SHEET 1 AA1 4 MET L 4 SER L 7 0 SHEET 2 AA1 4 ALA L 19 ALA L 25 -1 O ARG L 24 N THR L 5 SHEET 3 AA1 4 ASP L 70 ILE L 75 -1 O LEU L 73 N LEU L 21 SHEET 4 AA1 4 PHE L 62 SER L 67 -1 N SER L 63 O THR L 74 SHEET 1 AA2 5 THR L 10 LEU L 13 0 SHEET 2 AA2 5 THR L 102 ILE L 106 1 O ARG L 103 N LEU L 11 SHEET 3 AA2 5 ALA L 84 GLN L 90 -1 N ALA L 84 O LEU L 104 SHEET 4 AA2 5 LEU L 33 GLN L 38 -1 N GLN L 38 O VAL L 85 SHEET 5 AA2 5 ARG L 45 ILE L 48 -1 O LEU L 47 N TRP L 35 SHEET 1 AA3 4 THR L 10 LEU L 13 0 SHEET 2 AA3 4 THR L 102 ILE L 106 1 O ARG L 103 N LEU L 11 SHEET 3 AA3 4 ALA L 84 GLN L 90 -1 N ALA L 84 O LEU L 104 SHEET 4 AA3 4 THR L 97 PHE L 98 -1 O THR L 97 N GLN L 90 SHEET 1 AA4 4 SER L 114 PHE L 118 0 SHEET 2 AA4 4 THR L 129 PHE L 139 -1 O ASN L 137 N SER L 114 SHEET 3 AA4 4 TYR L 173 SER L 182 -1 O LEU L 181 N ALA L 130 SHEET 4 AA4 4 SER L 159 VAL L 163 -1 N GLN L 160 O THR L 178 SHEET 1 AA5 4 ALA L 153 LEU L 154 0 SHEET 2 AA5 4 LYS L 145 VAL L 150 -1 N VAL L 150 O ALA L 153 SHEET 3 AA5 4 VAL L 191 THR L 197 -1 O GLU L 195 N GLN L 147 SHEET 4 AA5 4 VAL L 205 ASN L 210 -1 O VAL L 205 N VAL L 196 SHEET 1 AA6 4 GLN H 3 GLN H 6 0 SHEET 2 AA6 4 VAL H 18 THR H 25 -1 O LYS H 23 N VAL H 5 SHEET 3 AA6 4 THR H 77 LEU H 82 -1 O LEU H 80 N VAL H 20 SHEET 4 AA6 4 LEU H 67 ASP H 72 -1 N ARG H 70 O PHE H 79 SHEET 1 AA7 6 GLU H 10 LYS H 12 0 SHEET 2 AA7 6 THR H 107 VAL H 111 1 O THR H 110 N LYS H 12 SHEET 3 AA7 6 ALA H 88 GLU H 97 -1 N TYR H 90 O THR H 107 SHEET 4 AA7 6 PHE H 34 GLN H 39 -1 N VAL H 37 O TYR H 91 SHEET 5 AA7 6 PRO H 45 VAL H 52 -1 O MET H 48 N TRP H 36 SHEET 6 AA7 6 ILE H 56 TYR H 59 -1 O ASN H 58 N GLY H 50 SHEET 1 AA8 4 GLU H 10 LYS H 12 0 SHEET 2 AA8 4 THR H 107 VAL H 111 1 O THR H 110 N LYS H 12 SHEET 3 AA8 4 ALA H 88 GLU H 97 -1 N TYR H 90 O THR H 107 SHEET 4 AA8 4 PRO H 100C TRP H 103 -1 O PHE H 102 N ARG H 94 SHEET 1 AA9 4 SER H 120 LEU H 124 0 SHEET 2 AA9 4 THR H 137 TYR H 147 -1 O LEU H 143 N PHE H 122 SHEET 3 AA9 4 TYR H 185 PRO H 194 -1 O LEU H 187 N VAL H 144 SHEET 4 AA9 4 VAL H 171 THR H 173 -1 N HIS H 172 O VAL H 190 SHEET 1 AB1 4 SER H 120 LEU H 124 0 SHEET 2 AB1 4 THR H 137 TYR H 147 -1 O LEU H 143 N PHE H 122 SHEET 3 AB1 4 TYR H 185 PRO H 194 -1 O LEU H 187 N VAL H 144 SHEET 4 AB1 4 VAL H 177 LEU H 178 -1 N VAL H 177 O SER H 186 SHEET 1 AB2 3 THR H 153 TRP H 157 0 SHEET 2 AB2 3 ILE H 207 HIS H 212 -1 O ASN H 209 N SER H 156 SHEET 3 AB2 3 THR H 217 LYS H 222 -1 O VAL H 219 N VAL H 210 SSBOND 1 CYS L 23 CYS L 88 1555 1555 2.06 SSBOND 2 CYS L 134 CYS L 194 1555 1555 2.10 SSBOND 3 CYS H 22 CYS H 92 1555 1555 2.07 SSBOND 4 CYS H 142 CYS H 208 1555 1555 2.07 CISPEP 1 SER L 7 PRO L 8 0 -5.32 CISPEP 2 SER L 7 PRO L 8 0 -8.69 CISPEP 3 TYR L 140 PRO L 141 0 6.89 CISPEP 4 PHE H 148 PRO H 149 0 -9.78 CISPEP 5 GLU H 150 PRO H 151 0 -1.03 SITE 1 AC1 3 SER L 65 ARG L 211 HOH L 411 SITE 1 AC2 7 ARG L 45 PRO L 59 ARG L 61 GLU L 81 SITE 2 AC2 7 HOH L 402 HOH L 405 HOH L 439 SITE 1 AC3 6 ASP H 72 THR H 75 HOH H 406 GLY L 200 SITE 2 AC3 6 SER L 202 GOL L 304 SITE 1 AC4 8 SER H 74 THR H 75 HOH H 406 ALA L 111 SITE 2 AC4 8 ALA L 112 GLY L 200 GOL L 303 HOH L 420 SITE 1 AC5 14 PHE H 174 PRO H 175 VAL H 177 SER H 186 SITE 2 AC5 14 LEU H 187 SER H 188 GLN L 160 GLU L 161 SITE 3 AC5 14 SER L 162 SER L 176 SER L 177 THR L 178 SITE 4 AC5 14 HOH L 421 HOH L 426 SITE 1 AC6 6 LYS H 228 SER L 121 ASP L 122 GLU L 123 SITE 2 AC6 6 HOH L 401 HOH L 564 SITE 1 AC7 3 PHE H 29 SER H 30 HOH H 427 SITE 1 AC8 8 HIS H 172 HOH H 424 HOH H 522 THR L 164 SITE 2 AC8 8 GLU L 165 GLN L 166 ASP L 167 HOH L 459 SITE 1 AC9 9 SER H 7 GLY H 8 GLY H 9 GLU H 10 SITE 2 AC9 9 SER H 115 THR H 116 HOH H 435 HOH H 436 SITE 3 AC9 9 HOH H 629 SITE 1 AD1 7 GLU H 10 VAL H 108 THR H 110 PRO H 149 SITE 2 AD1 7 GLU H 150 HOH H 459 HOH H 573 SITE 1 AD2 7 GLY H 98 TRP H 99 LYS H 100B LEU H 100D SITE 2 AD2 7 HOH H 411 TYR L 49 LYS L 126 CRYST1 87.590 96.021 67.325 90.00 120.18 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011417 0.000000 0.006640 0.00000 SCALE2 0.000000 0.010414 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017183 0.00000