HEADER    UNKNOWN FUNCTION                        07-MAR-19   6O6W              
TITLE     SOLUTION STRUCTURE OF HUMAN MYELOID-DERIVED GROWTH FACTOR             
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: MYELOID-DERIVED GROWTH FACTOR;                             
COMPND   3 CHAIN: A;                                                            
COMPND   4 SYNONYM: MYDGF;                                                      
COMPND   5 ENGINEERED: YES;                                                     
COMPND   6 OTHER_DETAILS: CLONING RESIDUES: G1-T5 MATURE HUMAN MYDGF: V6-L147   
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 CELL: HUMAN BLOOD EOSINOPHILS;                                       
SOURCE   6 GENE: MYDGF, C19ORF10;                                               
SOURCE   7 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   8 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   9 EXPRESSION_SYSTEM_STRAIN: ROSETTA 2(DE3);                            
SOURCE  10 EXPRESSION_SYSTEM_VARIANT: MILLIPORESIGMA 71400;                     
SOURCE  11 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE  12 EXPRESSION_SYSTEM_PLASMID: PET-ELMER                                 
KEYWDS    ENDOPLASMIC RETICULUM, UPF0556, UNKNOWN FUNCTION                      
EXPDTA    SOLUTION NMR                                                          
NUMMDL    20                                                                    
AUTHOR    V.BORTNOV,M.TONELLI,W.LEE,J.L.MARKLEY,D.F.MOSHER                      
REVDAT   6   20-NOV-24 6O6W    1       REMARK                                   
REVDAT   5   14-JUN-23 6O6W    1       REMARK                                   
REVDAT   4   15-JUL-20 6O6W    1       SOURCE REMARK HELIX  SHEET               
REVDAT   4 2                   1       SSBOND ATOM                              
REVDAT   3   25-DEC-19 6O6W    1       JRNL                                     
REVDAT   2   18-DEC-19 6O6W    1       REMARK                                   
REVDAT   1   13-NOV-19 6O6W    0                                                
JRNL        AUTH   V.BORTNOV,M.TONELLI,W.LEE,Z.LIN,D.S.ANNIS,O.N.DEMERDASH,     
JRNL        AUTH 2 A.BATEMAN,J.C.MITCHELL,Y.GE,J.L.MARKLEY,D.F.MOSHER           
JRNL        TITL   SOLUTION STRUCTURE OF HUMAN MYELOID-DERIVED GROWTH FACTOR    
JRNL        TITL 2 SUGGESTS A CONSERVED FUNCTION IN THE ENDOPLASMIC RETICULUM.  
JRNL        REF    NAT COMMUN                    V.  10  5612 2019              
JRNL        REFN                   ESSN 2041-1723                               
JRNL        PMID   31819058                                                     
JRNL        DOI    10.1038/S41467-019-13577-5                                   
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : PYMOL, PONDEROSA-C/S, X-PLOR NIH                     
REMARK   3   AUTHORS     : SCHROEDINGER, INC. (PYMOL), W. LEE, J.L. STARK,      
REMARK   3                 J.L. MARKLEY (PONDEROSA-C/S), SCHWIETERS,            
REMARK   3                 KUSZEWSKI, TJANDRA AND CLORE (X-PLOR NIH)            
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: EXPLICIT WATER REFINEMENT                 
REMARK   4                                                                      
REMARK   4 6O6W COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-MAR-19.                  
REMARK 100 THE DEPOSITION ID IS D_1000239248.                                   
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : 298                                
REMARK 210  PH                             : 6                                  
REMARK 210  IONIC STRENGTH                 : 135 (NACL)                         
REMARK 210  PRESSURE                       : 1 ATM                              
REMARK 210  SAMPLE CONTENTS                : 8.25 MG/ML U-15N; U-13C; NA-H      
REMARK 210                                   MYDGF, 9 MM NA SODIUM PHOSPHATE,   
REMARK 210                                   135 MM NA SODIUM CHLORIDE, 15 UM   
REMARK 210                                   NA DSS, 0.02 % W/V NA SODIUM       
REMARK 210                                   AZIDE, 90% H2O/10% D2O             
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : 3D 1H,15N-HSQC NOESY; 3D 1H,13C    
REMARK 210                                   -HSQC NOESY ALIPHATIC; 3D 1H,13C-  
REMARK 210                                   HSQC NOESY AROMATIC; 2D 1H-15N     
REMARK 210                                   HSQC; 2D 1H-13C HSQC ALIPHATIC;    
REMARK 210                                   2D 1H-13C HSQC AROMATIC; 3D        
REMARK 210                                   CBCA(CO)NH; 3D HNCACB; 3D HNCO;    
REMARK 210                                   3D C(CO)NH; 3D HBHA(CO)NH; 3D      
REMARK 210                                   HCCH-TOCSY ALIPHATIC; 3D H(CCO)    
REMARK 210                                   NH; 2D (HB)CB(CGCD)HD AROMATIC;    
REMARK 210                                   2D (HB)CB(CGCDCE)HDHE AROMATIC;    
REMARK 210                                   3D HCCH-TOCSY AROMATIC; 3D 1H,     
REMARK 210                                   15N-HSQC NOESY 1H,13C-HSQC         
REMARK 210  SPECTROMETER FIELD STRENGTH    : 800 MHZ; 600 MHZ; 900 MHZ          
REMARK 210  SPECTROMETER MODEL             : VNS; AVANCE III                    
REMARK 210  SPECTROMETER MANUFACTURER      : VARIAN; BRUKER                     
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : VNMR 4.2, TOPSPIN 3.5, NMRPIPE,    
REMARK 210                                   NMRFAM-SPARKY, I-PINE, PONDEROSA-  
REMARK 210                                   C/S, TALOS-N, X-PLOR NIH           
REMARK 210   METHOD USED                   : MOLECULAR DYNAMICS                 
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : 100                                
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 20                                 
REMARK 210 CONFORMERS, SELECTION CRITERIA  : ALL CALCULATED STRUCTURES          
REMARK 210                                   SUBMITTED                          
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1                   
REMARK 210                                                                      
REMARK 210 REMARK: NULL                                                         
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500  1 THR A   5       97.85     49.90                                   
REMARK 500  1 GLU A 103     -107.59     50.07                                   
REMARK 500  2 GLU A 103     -108.76     58.21                                   
REMARK 500  2 SER A 134      -55.63   -129.98                                   
REMARK 500  2 ARG A 144     -176.36     49.26                                   
REMARK 500  2 THR A 145       85.73     53.60                                   
REMARK 500  3 GLU A 103     -109.35     56.96                                   
REMARK 500  4 LYS A   3      -68.75     71.45                                   
REMARK 500  4 GLU A 103     -109.16     51.21                                   
REMARK 500  4 SER A 134      -69.13   -127.99                                   
REMARK 500  4 THR A 145      100.04     58.64                                   
REMARK 500  5 GLU A 103     -109.52     55.97                                   
REMARK 500  5 ALA A 131       32.70     71.28                                   
REMARK 500  5 SER A 134      -54.35   -140.25                                   
REMARK 500  6 THR A   5      100.27     55.14                                   
REMARK 500  6 SER A   7       34.29    -95.10                                   
REMARK 500  6 GLU A 103     -108.12     52.09                                   
REMARK 500  6 SER A 134      -50.46   -135.21                                   
REMARK 500  6 GLU A 146      156.01     65.58                                   
REMARK 500  7 SER A   7       82.64   -162.82                                   
REMARK 500  7 GLU A 103     -108.91     56.34                                   
REMARK 500  7 ALA A 131       30.38     72.41                                   
REMARK 500  7 SER A 134      -54.68   -133.70                                   
REMARK 500  7 SER A 143     -176.57     49.98                                   
REMARK 500  7 THR A 145       88.37     56.84                                   
REMARK 500  8 SER A   7      -31.08   -167.59                                   
REMARK 500  8 GLU A 103     -108.93     54.63                                   
REMARK 500  9 SER A   2      177.84     54.36                                   
REMARK 500  9 LYS A   3      125.19     62.92                                   
REMARK 500  9 TYR A  76       57.25   -108.07                                   
REMARK 500  9 GLU A 103     -108.17     54.47                                   
REMARK 500  9 ALA A 128      -53.97   -122.52                                   
REMARK 500 10 LYS A   3      -78.48     65.29                                   
REMARK 500 10 GLU A 103     -108.52     55.27                                   
REMARK 500 10 THR A 120       21.96   -150.87                                   
REMARK 500 10 ALA A 131       37.95     72.16                                   
REMARK 500 10 SER A 134      -46.35   -133.27                                   
REMARK 500 10 ARG A 144      -47.28     72.77                                   
REMARK 500 10 THR A 145       94.17     47.96                                   
REMARK 500 11 THR A   5      147.03     58.81                                   
REMARK 500 11 GLU A 103     -107.77     50.17                                   
REMARK 500 11 SER A 134      -34.59   -135.56                                   
REMARK 500 11 SER A 143     -171.70     52.36                                   
REMARK 500 12 GLU A 103     -108.39     55.87                                   
REMARK 500 12 LYS A 130      -85.06    -91.47                                   
REMARK 500 12 ALA A 131      -14.30   -159.75                                   
REMARK 500 12 SER A 134      -44.07   -132.98                                   
REMARK 500 12 THR A 145      -49.04     72.29                                   
REMARK 500 12 GLU A 146       90.57     60.81                                   
REMARK 500 13 SER A   2      -70.56     67.14                                   
REMARK 500                                                                      
REMARK 500 THIS ENTRY HAS      75 RAMACHANDRAN OUTLIERS.                        
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 30584   RELATED DB: BMRB                                 
REMARK 900 SOLUTION STRUCTURE OF HUMAN MYELOID-DERIVED GROWTH FACTOR            
DBREF  6O6W A    6   147  UNP    Q969H8   MYDGF_HUMAN     32    173             
SEQADV 6O6W GLY A    1  UNP  Q969H8              EXPRESSION TAG                 
SEQADV 6O6W SER A    2  UNP  Q969H8              EXPRESSION TAG                 
SEQADV 6O6W LYS A    3  UNP  Q969H8              EXPRESSION TAG                 
SEQADV 6O6W GLY A    4  UNP  Q969H8              EXPRESSION TAG                 
SEQADV 6O6W THR A    5  UNP  Q969H8              EXPRESSION TAG                 
SEQRES   1 A  147  GLY SER LYS GLY THR VAL SER GLU PRO THR THR VAL ALA          
SEQRES   2 A  147  PHE ASP VAL ARG PRO GLY GLY VAL VAL HIS SER PHE SER          
SEQRES   3 A  147  HIS ASN VAL GLY PRO GLY ASP LYS TYR THR CYS MET PHE          
SEQRES   4 A  147  THR TYR ALA SER GLN GLY GLY THR ASN GLU GLN TRP GLN          
SEQRES   5 A  147  MET SER LEU GLY THR SER GLU ASP HIS GLN HIS PHE THR          
SEQRES   6 A  147  CYS THR ILE TRP ARG PRO GLN GLY LYS SER TYR LEU TYR          
SEQRES   7 A  147  PHE THR GLN PHE LYS ALA GLU VAL ARG GLY ALA GLU ILE          
SEQRES   8 A  147  GLU TYR ALA MET ALA TYR SER LYS ALA ALA PHE GLU ARG          
SEQRES   9 A  147  GLU SER ASP VAL PRO LEU LYS THR GLU GLU PHE GLU VAL          
SEQRES  10 A  147  THR LYS THR ALA VAL ALA HIS ARG PRO GLY ALA PHE LYS          
SEQRES  11 A  147  ALA GLU LEU SER LYS LEU VAL ILE VAL ALA LYS ALA SER          
SEQRES  12 A  147  ARG THR GLU LEU                                              
HELIX    1 AA1 GLY A   30  LYS A   34  5                                   5    
HELIX    2 AA2 LYS A  111  GLU A  113  5                                   3    
SHEET    1 AA1 6 THR A  10  VAL A  16  0                                        
SHEET    2 AA1 6 GLU A  49  THR A  57 -1  O  GLU A  49   N  VAL A  16           
SHEET    3 AA1 6 HIS A  63  TRP A  69 -1  O  THR A  67   N  SER A  54           
SHEET    4 AA1 6 LYS A 135  ALA A 142 -1  O  LEU A 136   N  ILE A  68           
SHEET    5 AA1 6 ALA A  89  LYS A  99 -1  N  TYR A  93   O  VAL A 139           
SHEET    6 AA1 6 VAL A 108  PRO A 109 -1  O  VAL A 108   N  LYS A  99           
SHEET    1 AA2 5 VAL A  22  VAL A  29  0                                        
SHEET    2 AA2 5 TYR A  35  GLN A  44 -1  O  PHE A  39   N  PHE A  25           
SHEET    3 AA2 5 TYR A  78  ARG A  87 -1  O  GLN A  81   N  ALA A  42           
SHEET    4 AA2 5 ALA A 121  HIS A 124 -1  O  VAL A 122   N  ALA A  84           
SHEET    5 AA2 5 PHE A 115  VAL A 117 -1  N  GLU A 116   O  ALA A 123           
SSBOND   1 CYS A   37    CYS A   66                          1555   1555  2.03  
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000                         
MODEL        1