HEADER TRANSCRIPTION 11-MAR-19 6O8O TITLE CRYSTAL STRUCTURE OF C9S DISULFIDE STATE OF SULFIDE-RESPONSIVE TITLE 2 TRANSCRIPTIONAL REPRESSOR (SQRR) FROM RHODOBACTER CAPSULATUS. COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTIONAL REGULATOR, ARSR FAMILY; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RHODOBACTER CAPSULATUS; SOURCE 3 ORGANISM_TAXID: 1061; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRANSCRIPTION FACTOR, SULFIDE SENSOR, REACTIVE SULFUR SPECIES, KEYWDS 2 PHOTOSYNTHESIS REGULATION, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR D.A.CAPDEVILA,G.GONZALEZ-GUTIERREZ,D.P.GIEDROC REVDAT 4 30-DEC-20 6O8O 1 JRNL REVDAT 3 11-NOV-20 6O8O 1 JRNL REVDAT 2 28-OCT-20 6O8O 1 JRNL REVDAT 1 01-APR-20 6O8O 0 JRNL AUTH D.A.CAPDEVILA,B.J.C.WALSH,Y.ZHANG,C.DIETRICH, JRNL AUTH 2 G.GONZALEZ-GUTIERREZ,D.P.GIEDROC JRNL TITL STRUCTURAL BASIS FOR PERSULFIDE-SENSING SPECIFICITY IN A JRNL TITL 2 TRANSCRIPTIONAL REGULATOR. JRNL REF NAT.CHEM.BIOL. V. 17 65 2021 JRNL REFN ESSN 1552-4469 JRNL PMID 33106663 JRNL DOI 10.1038/S41589-020-00671-9 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH D.A.CAPDEVILA,B.J.C.WALSH,Y.ZHANG,C.M.DIETRICH, REMARK 1 AUTH 2 G.GONZALEZ-GUTIERREZ,D.P.GIEDROC REMARK 1 TITL STRUCTURAL DETERMINANTS OF PERSULFIDE-SENSING SPECIFICITY IN REMARK 1 TITL 2 A DITHIOL-BASED TRANSCRIPTIONAL REGULATOR REMARK 1 REF BIORXIV 2020 REMARK 1 REFN REMARK 1 DOI 10.1101/2020.03.22.001966V1 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.66 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.6 REMARK 3 NUMBER OF REFLECTIONS : 24511 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.231 REMARK 3 R VALUE (WORKING SET) : 0.229 REMARK 3 FREE R VALUE : 0.260 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.810 REMARK 3 FREE R VALUE TEST SET COUNT : 1178 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.6698 - 4.9985 1.00 3283 168 0.2119 0.2328 REMARK 3 2 4.9985 - 3.9680 0.99 3133 168 0.1898 0.2194 REMARK 3 3 3.9680 - 3.4666 0.93 2897 153 0.2336 0.2811 REMARK 3 4 3.4666 - 3.1497 0.98 3004 177 0.2577 0.2800 REMARK 3 5 3.1497 - 2.9240 0.96 2967 119 0.2638 0.3197 REMARK 3 6 2.9240 - 2.7516 0.93 2874 133 0.2652 0.3230 REMARK 3 7 2.7516 - 2.6138 0.88 2686 140 0.2863 0.2850 REMARK 3 8 2.6138 - 2.5000 0.82 2489 120 0.3106 0.4162 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.380 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 3197 REMARK 3 ANGLE : 0.525 4305 REMARK 3 CHIRALITY : 0.036 491 REMARK 3 PLANARITY : 0.002 550 REMARK 3 DIHEDRAL : 4.588 2162 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 24.5239 -28.3998 -2.3144 REMARK 3 T TENSOR REMARK 3 T11: 0.4393 T22: 0.2964 REMARK 3 T33: 0.3333 T12: -0.2123 REMARK 3 T13: 0.0671 T23: -0.0389 REMARK 3 L TENSOR REMARK 3 L11: 0.1521 L22: 0.3285 REMARK 3 L33: 0.6335 L12: -0.0255 REMARK 3 L13: 0.1871 L23: 0.3373 REMARK 3 S TENSOR REMARK 3 S11: -0.0504 S12: 0.0724 S13: 0.0184 REMARK 3 S21: 0.1853 S22: -0.0282 S23: 0.0772 REMARK 3 S31: -0.0891 S32: -0.0757 S33: -0.0016 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6O8O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-MAR-19. REMARK 100 THE DEPOSITION ID IS D_1000240033. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-AUG-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 4.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97625 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CMOS REMARK 200 DETECTOR MANUFACTURER : RDI CMOS_8M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24511 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 49.660 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 21.10 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.11200 REMARK 200 FOR THE DATA SET : 27.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 18.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.65 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.69 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTALLIZATION BUFFER: 0.1M BIS-TRIS REMARK 280 PROPANE PH 5.5-6.5, 1.6-1.85M AMMONIUM SULFATE; PROTEIN BUFFER: REMARK 280 20 MM TRIS PH=8, 200 MM NACL, 2MM EDTA, SQRR 6 MG/ML, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 99.32000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 49.66000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 49.66000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 99.32000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3640 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11680 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -78.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3820 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10490 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -85.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 0 REMARK 465 MSE A 1 REMARK 465 GLY A 2 REMARK 465 SER A 3 REMARK 465 ASP A 4 REMARK 465 THR A 5 REMARK 465 ASP A 6 REMARK 465 GLU A 7 REMARK 465 ARG A 8 REMARK 465 SER A 9 REMARK 465 ALA A 10 REMARK 465 ALA A 11 REMARK 465 LEU A 12 REMARK 465 ASP A 13 REMARK 465 HIS B 0 REMARK 465 GLY B 109 REMARK 465 ASP B 110 REMARK 465 HIS C 0 REMARK 465 MSE C 1 REMARK 465 GLY C 2 REMARK 465 SER C 3 REMARK 465 ASP C 4 REMARK 465 THR C 5 REMARK 465 ASP C 6 REMARK 465 GLU C 7 REMARK 465 ARG C 8 REMARK 465 SER C 9 REMARK 465 ALA C 10 REMARK 465 ALA C 11 REMARK 465 LEU C 12 REMARK 465 GLY C 109 REMARK 465 ASP C 110 REMARK 465 HIS D 0 REMARK 465 MSE D 1 REMARK 465 GLY D 2 REMARK 465 SER D 3 REMARK 465 ASP D 4 REMARK 465 THR D 5 REMARK 465 ASP D 6 REMARK 465 GLU D 7 REMARK 465 ARG D 8 REMARK 465 SER D 9 REMARK 465 GLY D 109 REMARK 465 ASP D 110 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH C 317 O HOH C 321 1.88 REMARK 500 OE2 GLU A 74 O HOH A 301 2.02 REMARK 500 OE1 GLU D 74 O HOH D 301 2.04 REMARK 500 O ALA A 62 O HOH A 302 2.06 REMARK 500 OD1 ASN D 26 O HOH D 302 2.09 REMARK 500 N GLU B 34 O HOH B 301 2.16 REMARK 500 O GLY C 35 O HOH C 301 2.17 REMARK 500 O GLU B 7 O HOH B 302 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN B 105 -1.37 -148.02 REMARK 500 ALA C 14 -7.94 72.01 REMARK 500 ALA C 62 118.05 -162.00 REMARK 500 SER D 49 -176.26 -65.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 C 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 C 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 C 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL C 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 D 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 D 202 DBREF 6O8O A 1 110 UNP D5AT91 D5AT91_RHOCB 15 124 DBREF 6O8O B 1 110 UNP D5AT91 D5AT91_RHOCB 15 124 DBREF 6O8O C 1 110 UNP D5AT91 D5AT91_RHOCB 15 124 DBREF 6O8O D 1 110 UNP D5AT91 D5AT91_RHOCB 15 124 SEQADV 6O8O HIS A 0 UNP D5AT91 EXPRESSION TAG SEQADV 6O8O SER A 9 UNP D5AT91 CYS 23 ENGINEERED MUTATION SEQADV 6O8O HIS B 0 UNP D5AT91 EXPRESSION TAG SEQADV 6O8O SER B 9 UNP D5AT91 CYS 23 ENGINEERED MUTATION SEQADV 6O8O HIS C 0 UNP D5AT91 EXPRESSION TAG SEQADV 6O8O SER C 9 UNP D5AT91 CYS 23 ENGINEERED MUTATION SEQADV 6O8O HIS D 0 UNP D5AT91 EXPRESSION TAG SEQADV 6O8O SER D 9 UNP D5AT91 CYS 23 ENGINEERED MUTATION SEQRES 1 A 111 HIS MSE GLY SER ASP THR ASP GLU ARG SER ALA ALA LEU SEQRES 2 A 111 ASP ALA GLU GLU MSE ALA THR ARG ALA ARG ALA ALA SER SEQRES 3 A 111 ASN LEU LEU LYS ALA LEU ALA HIS GLU GLY ARG LEU MSE SEQRES 4 A 111 ILE MSE CYS TYR LEU ALA SER GLY GLU LYS SER VAL THR SEQRES 5 A 111 GLU LEU GLU THR ARG LEU SER THR ARG GLN ALA ALA VAL SEQRES 6 A 111 SER GLN GLN LEU ALA ARG LEU ARG LEU GLU GLY LEU VAL SEQRES 7 A 111 GLN SER ARG ARG GLU GLY LYS THR ILE TYR TYR SER LEU SEQRES 8 A 111 SER ASP PRO ARG ALA ALA ARG VAL VAL GLN THR VAL TYR SEQRES 9 A 111 GLU GLN PHE CYS SER GLY ASP SEQRES 1 B 111 HIS MSE GLY SER ASP THR ASP GLU ARG SER ALA ALA LEU SEQRES 2 B 111 ASP ALA GLU GLU MSE ALA THR ARG ALA ARG ALA ALA SER SEQRES 3 B 111 ASN LEU LEU LYS ALA LEU ALA HIS GLU GLY ARG LEU MSE SEQRES 4 B 111 ILE MSE CYS TYR LEU ALA SER GLY GLU LYS SER VAL THR SEQRES 5 B 111 GLU LEU GLU THR ARG LEU SER THR ARG GLN ALA ALA VAL SEQRES 6 B 111 SER GLN GLN LEU ALA ARG LEU ARG LEU GLU GLY LEU VAL SEQRES 7 B 111 GLN SER ARG ARG GLU GLY LYS THR ILE TYR TYR SER LEU SEQRES 8 B 111 SER ASP PRO ARG ALA ALA ARG VAL VAL GLN THR VAL TYR SEQRES 9 B 111 GLU GLN PHE CYS SER GLY ASP SEQRES 1 C 111 HIS MSE GLY SER ASP THR ASP GLU ARG SER ALA ALA LEU SEQRES 2 C 111 ASP ALA GLU GLU MSE ALA THR ARG ALA ARG ALA ALA SER SEQRES 3 C 111 ASN LEU LEU LYS ALA LEU ALA HIS GLU GLY ARG LEU MSE SEQRES 4 C 111 ILE MSE CYS TYR LEU ALA SER GLY GLU LYS SER VAL THR SEQRES 5 C 111 GLU LEU GLU THR ARG LEU SER THR ARG GLN ALA ALA VAL SEQRES 6 C 111 SER GLN GLN LEU ALA ARG LEU ARG LEU GLU GLY LEU VAL SEQRES 7 C 111 GLN SER ARG ARG GLU GLY LYS THR ILE TYR TYR SER LEU SEQRES 8 C 111 SER ASP PRO ARG ALA ALA ARG VAL VAL GLN THR VAL TYR SEQRES 9 C 111 GLU GLN PHE CYS SER GLY ASP SEQRES 1 D 111 HIS MSE GLY SER ASP THR ASP GLU ARG SER ALA ALA LEU SEQRES 2 D 111 ASP ALA GLU GLU MSE ALA THR ARG ALA ARG ALA ALA SER SEQRES 3 D 111 ASN LEU LEU LYS ALA LEU ALA HIS GLU GLY ARG LEU MSE SEQRES 4 D 111 ILE MSE CYS TYR LEU ALA SER GLY GLU LYS SER VAL THR SEQRES 5 D 111 GLU LEU GLU THR ARG LEU SER THR ARG GLN ALA ALA VAL SEQRES 6 D 111 SER GLN GLN LEU ALA ARG LEU ARG LEU GLU GLY LEU VAL SEQRES 7 D 111 GLN SER ARG ARG GLU GLY LYS THR ILE TYR TYR SER LEU SEQRES 8 D 111 SER ASP PRO ARG ALA ALA ARG VAL VAL GLN THR VAL TYR SEQRES 9 D 111 GLU GLN PHE CYS SER GLY ASP MODRES 6O8O MSE A 17 MET MODIFIED RESIDUE MODRES 6O8O MSE A 38 MET MODIFIED RESIDUE MODRES 6O8O MSE A 40 MET MODIFIED RESIDUE MODRES 6O8O MSE B 1 MET MODIFIED RESIDUE MODRES 6O8O MSE B 17 MET MODIFIED RESIDUE MODRES 6O8O MSE B 38 MET MODIFIED RESIDUE MODRES 6O8O MSE B 40 MET MODIFIED RESIDUE MODRES 6O8O MSE C 17 MET MODIFIED RESIDUE MODRES 6O8O MSE C 38 MET MODIFIED RESIDUE MODRES 6O8O MSE C 40 MET MODIFIED RESIDUE MODRES 6O8O MSE D 17 MET MODIFIED RESIDUE MODRES 6O8O MSE D 38 MET MODIFIED RESIDUE MODRES 6O8O MSE D 40 MET MODIFIED RESIDUE HET MSE A 17 8 HET MSE A 38 8 HET MSE A 40 8 HET MSE B 1 8 HET MSE B 17 8 HET MSE B 38 8 HET MSE B 40 8 HET MSE C 17 8 HET MSE C 38 8 HET MSE C 40 8 HET MSE D 17 8 HET MSE D 38 8 HET MSE D 40 8 HET SO4 A 201 5 HET SO4 A 202 5 HET CL A 203 1 HET SO4 B 201 5 HET SO4 B 202 5 HET SO4 C 201 5 HET SO4 C 202 5 HET SO4 C 203 5 HET SO4 C 204 5 HET CL C 205 1 HET SO4 D 201 5 HET SO4 D 202 5 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION HETNAM CL CHLORIDE ION FORMUL 1 MSE 13(C5 H11 N O2 SE) FORMUL 5 SO4 10(O4 S 2-) FORMUL 7 CL 2(CL 1-) FORMUL 17 HOH *58(H2 O) HELIX 1 AA1 ALA A 14 ALA A 32 1 19 HELIX 2 AA2 HIS A 33 SER A 45 1 13 HELIX 3 AA3 VAL A 50 LEU A 57 1 8 HELIX 4 AA4 ARG A 60 GLU A 74 1 15 HELIX 5 AA5 ASP A 92 GLU A 104 1 13 HELIX 6 AA6 SER B 3 ALA B 10 1 8 HELIX 7 AA7 ASP B 13 ALA B 32 1 20 HELIX 8 AA8 HIS B 33 GLY B 46 1 14 HELIX 9 AA9 VAL B 50 LEU B 57 1 8 HELIX 10 AB1 ALA B 62 GLU B 74 1 13 HELIX 11 AB2 ASP B 92 TYR B 103 1 12 HELIX 12 AB3 GLU C 15 ALA C 32 1 18 HELIX 13 AB4 HIS C 33 GLY C 46 1 14 HELIX 14 AB5 VAL C 50 LEU C 57 1 8 HELIX 15 AB6 ALA C 63 GLU C 74 1 12 HELIX 16 AB7 ASP C 92 GLU C 104 1 13 HELIX 17 AB8 ASP D 13 ALA D 32 1 20 HELIX 18 AB9 HIS D 33 GLY D 46 1 14 HELIX 19 AC1 VAL D 50 SER D 58 1 9 HELIX 20 AC2 ALA D 62 GLU D 74 1 13 HELIX 21 AC3 ASP D 92 GLU D 104 1 13 SHEET 1 AA1 3 LYS A 48 SER A 49 0 SHEET 2 AA1 3 THR A 85 SER A 89 -1 O TYR A 88 N LYS A 48 SHEET 3 AA1 3 GLN A 78 GLU A 82 -1 N ARG A 80 O TYR A 87 SHEET 1 AA2 3 LYS B 48 SER B 49 0 SHEET 2 AA2 3 ILE B 86 LEU B 90 -1 O TYR B 88 N LYS B 48 SHEET 3 AA2 3 VAL B 77 ARG B 81 -1 N ARG B 80 O TYR B 87 SHEET 1 AA3 3 LYS C 48 SER C 49 0 SHEET 2 AA3 3 THR C 85 SER C 89 -1 O TYR C 88 N LYS C 48 SHEET 3 AA3 3 GLN C 78 GLU C 82 -1 N ARG C 80 O TYR C 87 SHEET 1 AA4 2 VAL D 77 ARG D 81 0 SHEET 2 AA4 2 ILE D 86 LEU D 90 -1 O TYR D 87 N ARG D 80 SSBOND 1 CYS A 41 CYS A 107 1555 1555 2.03 SSBOND 2 CYS B 41 CYS B 107 1555 1555 2.03 SSBOND 3 CYS C 41 CYS C 107 1555 1555 2.04 SSBOND 4 CYS D 41 CYS D 107 1555 1555 2.04 LINK C GLU A 16 N MSE A 17 1555 1555 1.33 LINK C MSE A 17 N ALA A 18 1555 1555 1.34 LINK C LEU A 37 N MSE A 38 1555 1555 1.33 LINK C MSE A 38 N ILE A 39 1555 1555 1.34 LINK C ILE A 39 N MSE A 40 1555 1555 1.33 LINK C MSE A 40 N CYS A 41 1555 1555 1.34 LINK C MSE B 1 N GLY B 2 1555 1555 1.33 LINK C GLU B 16 N MSE B 17 1555 1555 1.33 LINK C MSE B 17 N ALA B 18 1555 1555 1.34 LINK C LEU B 37 N MSE B 38 1555 1555 1.33 LINK C MSE B 38 N ILE B 39 1555 1555 1.33 LINK C ILE B 39 N MSE B 40 1555 1555 1.33 LINK C MSE B 40 N CYS B 41 1555 1555 1.33 LINK C GLU C 16 N MSE C 17 1555 1555 1.33 LINK C MSE C 17 N ALA C 18 1555 1555 1.34 LINK C LEU C 37 N MSE C 38 1555 1555 1.33 LINK C MSE C 38 N ILE C 39 1555 1555 1.34 LINK C ILE C 39 N MSE C 40 1555 1555 1.33 LINK C MSE C 40 N CYS C 41 1555 1555 1.34 LINK C GLU D 16 N MSE D 17 1555 1555 1.33 LINK C MSE D 17 N ALA D 18 1555 1555 1.34 LINK C LEU D 37 N MSE D 38 1555 1555 1.33 LINK C MSE D 38 N ILE D 39 1555 1555 1.34 LINK C ILE D 39 N MSE D 40 1555 1555 1.33 LINK C MSE D 40 N CYS D 41 1555 1555 1.33 SITE 1 AC1 2 ARG A 36 ARG A 70 SITE 1 AC2 5 ARG A 72 GLN A 78 SER A 79 PRO C 93 SITE 2 AC2 5 ARG C 97 SITE 1 AC3 1 HIS A 33 SITE 1 AC4 2 ARG B 36 ARG B 70 SITE 1 AC5 4 ARG B 72 GLN B 78 SER B 79 ARG D 97 SITE 1 AC6 2 ARG C 36 ARG C 70 SITE 1 AC7 1 ARG C 81 SITE 1 AC8 2 ARG B 8 LYS C 84 SITE 1 AC9 5 LYS C 48 ARG C 56 ALA D 11 LEU D 12 SITE 2 AC9 5 HOH D 303 SITE 1 AD1 3 LYS C 29 HIS D 33 GLU D 34 SITE 1 AD2 3 HIS D 33 ARG D 36 ARG D 70 SITE 1 AD3 5 PRO B 93 ARG B 97 ARG D 72 GLN D 78 SITE 2 AD3 5 SER D 79 CRYST1 92.600 92.600 148.980 90.00 90.00 120.00 P 32 2 1 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010799 0.006235 0.000000 0.00000 SCALE2 0.000000 0.012470 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006712 0.00000