HEADER TOXIN 21-MAR-19 6OBM TITLE RICIN A CHAIN BOUND TO VHH ANTIBODY V6A7 COMPND MOL_ID: 1; COMPND 2 MOLECULE: RICIN A CHAIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: TOXIN CATALYTIC SUBUNIT, RESIDUES 40-298; COMPND 5 EC: 3.2.2.22; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: VHH ANTIBODY V6A7; COMPND 9 CHAIN: B; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RICINUS COMMUNIS; SOURCE 3 ORGANISM_COMMON: CASTOR BEAN; SOURCE 4 ORGANISM_TAXID: 3988; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: VICUGNA PACOS; SOURCE 9 ORGANISM_COMMON: ALPACA; SOURCE 10 ORGANISM_TAXID: 30538; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TOXIN EXPDTA X-RAY DIFFRACTION AUTHOR M.J.RUDOLPH REVDAT 2 14-OCT-20 6OBM 1 JRNL REVDAT 1 01-APR-20 6OBM 0 JRNL AUTH M.J.RUDOLPH,T.F.CZAJKA,S.A.DAVIS,C.M.THI NGUYEN,X.P.LI, JRNL AUTH 2 N.E.TUMER,D.J.VANCE,N.J.MANTIS JRNL TITL INTRACELLULAR NEUTRALIZATION OF RICIN TOXIN BY SINGLE-DOMAIN JRNL TITL 2 ANTIBODIES TARGETING THE ACTIVE SITE. JRNL REF J.MOL.BIOL. V. 432 1109 2020 JRNL REFN ESSN 1089-8638 JRNL PMID 31931008 JRNL DOI 10.1016/J.JMB.2020.01.006 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.60 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 14930 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.211 REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.261 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.490 REMARK 3 FREE R VALUE TEST SET COUNT : 671 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.6030 - 4.2662 1.00 3006 126 0.1790 0.2555 REMARK 3 2 4.2662 - 3.3865 1.00 2846 171 0.1916 0.2196 REMARK 3 3 3.3865 - 2.9585 1.00 2831 118 0.2385 0.3256 REMARK 3 4 2.9585 - 2.6880 1.00 2813 132 0.2904 0.3143 REMARK 3 5 2.6880 - 2.4954 0.98 2763 124 0.3236 0.3448 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.00 REMARK 3 SHRINKAGE RADIUS : 0.72 REMARK 3 K_SOL : 0.34 REMARK 3 B_SOL : 50.61 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.730 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.200 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 58.61 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 69.98 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.05310 REMARK 3 B22 (A**2) : 4.05310 REMARK 3 B33 (A**2) : -8.10610 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 2997 REMARK 3 ANGLE : 0.732 4072 REMARK 3 CHIRALITY : 0.051 451 REMARK 3 PLANARITY : 0.003 537 REMARK 3 DIHEDRAL : 14.087 1089 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 5:56) REMARK 3 ORIGIN FOR THE GROUP (A): -21.4312 6.9500 -16.3860 REMARK 3 T TENSOR REMARK 3 T11: 0.3764 T22: 0.4281 REMARK 3 T33: 0.4029 T12: -0.0354 REMARK 3 T13: -0.0749 T23: -0.0178 REMARK 3 L TENSOR REMARK 3 L11: 1.5283 L22: 6.2962 REMARK 3 L33: 5.4647 L12: -1.6505 REMARK 3 L13: -0.6991 L23: 1.3019 REMARK 3 S TENSOR REMARK 3 S11: -0.3260 S12: -0.3022 S13: 0.1662 REMARK 3 S21: 0.7520 S22: 0.3069 S23: -0.3811 REMARK 3 S31: 0.4995 S32: 0.1860 S33: 0.0396 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 57:122) REMARK 3 ORIGIN FOR THE GROUP (A): -36.2409 12.6746 -19.6913 REMARK 3 T TENSOR REMARK 3 T11: 0.3022 T22: 0.3224 REMARK 3 T33: 0.2786 T12: 0.0298 REMARK 3 T13: 0.0267 T23: -0.0561 REMARK 3 L TENSOR REMARK 3 L11: 5.0638 L22: 6.4102 REMARK 3 L33: 7.1113 L12: -1.8989 REMARK 3 L13: 1.2658 L23: 0.8020 REMARK 3 S TENSOR REMARK 3 S11: -0.3383 S12: -0.1930 S13: 0.0949 REMARK 3 S21: 0.3120 S22: 0.0577 S23: 0.2705 REMARK 3 S31: -0.2583 S32: -0.2645 S33: 0.1728 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 123:263) REMARK 3 ORIGIN FOR THE GROUP (A): -27.6550 -3.1087 -26.8689 REMARK 3 T TENSOR REMARK 3 T11: 0.2773 T22: 0.3513 REMARK 3 T33: 0.2612 T12: -0.0262 REMARK 3 T13: 0.0052 T23: -0.0165 REMARK 3 L TENSOR REMARK 3 L11: 3.2225 L22: 5.2202 REMARK 3 L33: 2.2552 L12: -2.1458 REMARK 3 L13: 1.1756 L23: -1.5591 REMARK 3 S TENSOR REMARK 3 S11: -0.1065 S12: 0.0909 S13: -0.1844 REMARK 3 S21: -0.0022 S22: 0.1340 S23: 0.0572 REMARK 3 S31: -0.0035 S32: 0.1608 S33: -0.0360 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 1:18) REMARK 3 ORIGIN FOR THE GROUP (A): -48.3604 -26.3759 -21.0038 REMARK 3 T TENSOR REMARK 3 T11: 0.7650 T22: 0.7928 REMARK 3 T33: 0.7712 T12: -0.1632 REMARK 3 T13: 0.3622 T23: 0.0798 REMARK 3 L TENSOR REMARK 3 L11: 4.4635 L22: 4.4726 REMARK 3 L33: 6.0858 L12: 2.1084 REMARK 3 L13: 0.6532 L23: -0.5557 REMARK 3 S TENSOR REMARK 3 S11: 0.7491 S12: -0.4177 S13: -0.1164 REMARK 3 S21: 0.7375 S22: -0.2400 S23: 0.1418 REMARK 3 S31: 1.0637 S32: -1.4987 S33: -0.2997 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 19:34) REMARK 3 ORIGIN FOR THE GROUP (A): -47.4154 -14.4855 -21.4405 REMARK 3 T TENSOR REMARK 3 T11: 0.4834 T22: 0.6520 REMARK 3 T33: 0.8443 T12: -0.1666 REMARK 3 T13: 0.1729 T23: -0.1465 REMARK 3 L TENSOR REMARK 3 L11: 5.5881 L22: 9.3361 REMARK 3 L33: 1.1845 L12: 1.1908 REMARK 3 L13: 0.2537 L23: 0.5212 REMARK 3 S TENSOR REMARK 3 S11: 0.3126 S12: 0.1938 S13: 0.5813 REMARK 3 S21: 0.5350 S22: -0.4426 S23: 1.7490 REMARK 3 S31: 0.2165 S32: -0.3147 S33: 0.1191 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 35:45) REMARK 3 ORIGIN FOR THE GROUP (A): -36.1394 -26.5806 -20.2996 REMARK 3 T TENSOR REMARK 3 T11: 0.9194 T22: 0.6597 REMARK 3 T33: 0.6062 T12: -0.0658 REMARK 3 T13: -0.0155 T23: 0.0890 REMARK 3 L TENSOR REMARK 3 L11: 7.9716 L22: 2.1212 REMARK 3 L33: 7.8446 L12: -1.9225 REMARK 3 L13: -1.3701 L23: -0.6218 REMARK 3 S TENSOR REMARK 3 S11: -0.1624 S12: -1.7245 S13: -0.7270 REMARK 3 S21: 1.1583 S22: -0.4044 S23: 0.6957 REMARK 3 S31: 0.8242 S32: 0.2205 S33: 0.3701 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 46:64) REMARK 3 ORIGIN FOR THE GROUP (A): -36.9435 -19.4099 -29.1964 REMARK 3 T TENSOR REMARK 3 T11: 0.5207 T22: 0.4942 REMARK 3 T33: 0.3197 T12: -0.0427 REMARK 3 T13: -0.0523 T23: -0.0441 REMARK 3 L TENSOR REMARK 3 L11: 8.1107 L22: 6.1812 REMARK 3 L33: 6.2980 L12: -1.8150 REMARK 3 L13: -0.1759 L23: -3.5507 REMARK 3 S TENSOR REMARK 3 S11: 0.0638 S12: 0.6369 S13: -0.3212 REMARK 3 S21: 0.5017 S22: -0.3512 S23: 0.0930 REMARK 3 S31: 0.7413 S32: 0.4682 S33: 0.1608 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 65:83) REMARK 3 ORIGIN FOR THE GROUP (A): -46.3834 -20.1361 -29.7227 REMARK 3 T TENSOR REMARK 3 T11: 0.3880 T22: 0.5436 REMARK 3 T33: 0.5331 T12: -0.1312 REMARK 3 T13: 0.0422 T23: 0.0450 REMARK 3 L TENSOR REMARK 3 L11: 9.0606 L22: 2.8630 REMARK 3 L33: 6.2068 L12: -4.6638 REMARK 3 L13: -5.5393 L23: 3.9574 REMARK 3 S TENSOR REMARK 3 S11: 0.2787 S12: 0.2327 S13: 1.1807 REMARK 3 S21: -0.1047 S22: 0.3004 S23: -0.5836 REMARK 3 S31: 0.2646 S32: -0.2653 S33: -0.4897 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 84:100) REMARK 3 ORIGIN FOR THE GROUP (A): -40.3053 -28.5694 -24.1242 REMARK 3 T TENSOR REMARK 3 T11: 0.8966 T22: 0.4166 REMARK 3 T33: 0.4402 T12: 0.1381 REMARK 3 T13: 0.0515 T23: -0.0397 REMARK 3 L TENSOR REMARK 3 L11: 4.6474 L22: 6.1410 REMARK 3 L33: 4.1885 L12: 5.2993 REMARK 3 L13: 1.5277 L23: 2.4194 REMARK 3 S TENSOR REMARK 3 S11: 0.4369 S12: 0.1314 S13: -0.6773 REMARK 3 S21: -0.1573 S22: -0.5094 S23: 0.4754 REMARK 3 S31: 1.2225 S32: 0.2940 S33: 0.0944 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 101:120) REMARK 3 ORIGIN FOR THE GROUP (A): -39.7321 -16.7236 -17.6501 REMARK 3 T TENSOR REMARK 3 T11: 0.8697 T22: 0.5799 REMARK 3 T33: 0.6154 T12: -0.1283 REMARK 3 T13: 0.1482 T23: 0.0468 REMARK 3 L TENSOR REMARK 3 L11: 2.6310 L22: 7.7375 REMARK 3 L33: 1.7102 L12: 3.1291 REMARK 3 L13: -0.6725 L23: -1.0982 REMARK 3 S TENSOR REMARK 3 S11: 0.4615 S12: -0.9800 S13: 0.0959 REMARK 3 S21: 1.6959 S22: -0.7441 S23: 1.5453 REMARK 3 S31: 0.6866 S32: -0.1639 S33: 0.2867 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6OBM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-MAR-19. REMARK 100 THE DEPOSITION ID IS D_1000240396. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-NOV-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14935 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.495 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 13.40 REMARK 200 R MERGE (I) : 0.10400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.8 REMARK 200 DATA REDUNDANCY IN SHELL : 7.00 REMARK 200 R MERGE FOR SHELL (I) : 1.54500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.6 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 200 MM POTASSIUM SULFATE AND 20% PEG REMARK 280 3,350, VAPOR DIFFUSION, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 51.32700 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 51.32700 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 78.43800 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 51.32700 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 51.32700 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 78.43800 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 51.32700 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 51.32700 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 78.43800 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 51.32700 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 51.32700 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 78.43800 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 51.32700 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 51.32700 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 78.43800 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 51.32700 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 51.32700 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 78.43800 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 51.32700 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 51.32700 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 78.43800 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 51.32700 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 51.32700 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 78.43800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2430 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16190 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY B 9 REMARK 465 GLY B 10 REMARK 465 GLY B 11 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLU A 208 O HOH A 401 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 108 56.25 39.45 REMARK 500 GLU A 135 2.40 -63.58 REMARK 500 ILE A 175 -67.30 -121.16 REMARK 500 ILE A 192 -69.56 72.56 REMARK 500 ARG A 258 -57.55 -120.61 REMARK 500 SER B 28 50.51 32.23 REMARK 500 ASN B 33 -119.57 -100.94 REMARK 500 PRO B 42 131.09 -39.28 REMARK 500 LYS B 44 -98.05 -91.81 REMARK 500 ALA B 92 166.32 177.44 REMARK 500 ASP B 106 57.52 -119.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 301 DBREF 6OBM A 5 263 UNP P02879 RICI_RICCO 40 298 DBREF 6OBM B 1 120 PDB 6OBM 6OBM 1 120 SEQADV 6OBM ASN A 111 UNP P02879 VAL 146 CONFLICT SEQRES 1 A 259 GLN TYR PRO ILE ILE ASN PHE THR THR ALA GLY ALA THR SEQRES 2 A 259 VAL GLN SER TYR THR ASN PHE ILE ARG ALA VAL ARG GLY SEQRES 3 A 259 ARG LEU THR THR GLY ALA ASP VAL ARG HIS GLU ILE PRO SEQRES 4 A 259 VAL LEU PRO ASN ARG VAL GLY LEU PRO ILE ASN GLN ARG SEQRES 5 A 259 PHE ILE LEU VAL GLU LEU SER ASN HIS ALA GLU LEU SER SEQRES 6 A 259 VAL THR LEU ALA LEU ASP VAL THR ASN ALA TYR VAL VAL SEQRES 7 A 259 GLY TYR ARG ALA GLY ASN SER ALA TYR PHE PHE HIS PRO SEQRES 8 A 259 ASP ASN GLN GLU ASP ALA GLU ALA ILE THR HIS LEU PHE SEQRES 9 A 259 THR ASP ASN GLN ASN ARG TYR THR PHE ALA PHE GLY GLY SEQRES 10 A 259 ASN TYR ASP ARG LEU GLU GLN LEU ALA GLY ASN LEU ARG SEQRES 11 A 259 GLU ASN ILE GLU LEU GLY ASN GLY PRO LEU GLU GLU ALA SEQRES 12 A 259 ILE SER ALA LEU TYR TYR TYR SER THR GLY GLY THR GLN SEQRES 13 A 259 LEU PRO THR LEU ALA ARG SER PHE ILE ILE CYS ILE GLN SEQRES 14 A 259 MET ILE SER GLU ALA ALA ARG PHE GLN TYR ILE GLU GLY SEQRES 15 A 259 GLU MET ARG THR ARG ILE ARG TYR ASN ARG ARG SER ALA SEQRES 16 A 259 PRO ASP PRO SER VAL ILE THR LEU GLU ASN SER TRP GLY SEQRES 17 A 259 ARG LEU SER THR ALA ILE GLN GLU SER ASN GLN GLY ALA SEQRES 18 A 259 PHE ALA SER PRO ILE GLN LEU GLN ARG ARG ASN GLY SER SEQRES 19 A 259 LYS PHE SER VAL TYR ASP VAL SER ILE LEU ILE PRO ILE SEQRES 20 A 259 ILE ALA LEU MET VAL TYR ARG CYS ALA PRO PRO PRO SEQRES 1 B 120 GLN VAL GLN LEU VAL GLU THR GLY GLY GLY GLY LEU VAL SEQRES 2 B 120 GLN ALA GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER SEQRES 3 B 120 GLY SER ILE SER SER LEU ASN ALA MET GLY TRP TYR ARG SEQRES 4 B 120 GLN ALA PRO GLY LYS GLU ARG GLU LEU VAL ALA ASP ILE SEQRES 5 B 120 SER ALA SER GLY ARG THR ASN TYR ALA ASP SER VAL LYS SEQRES 6 B 120 GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN THR SEQRES 7 B 120 VAL SER LEU GLN MET ASN SER LEU LYS PRO GLU ASP THR SEQRES 8 B 120 ALA VAL TYR TYR CYS ASN ALA VAL GLY GLY THR TYR TYR SEQRES 9 B 120 TYR ASP GLU TYR ASP TYR TRP GLY GLN GLY THR GLN VAL SEQRES 10 B 120 THR VAL SER HET CL A 301 1 HETNAM CL CHLORIDE ION FORMUL 3 CL CL 1- FORMUL 4 HOH *14(H2 O) HELIX 1 AA1 THR A 17 THR A 33 1 17 HELIX 2 AA2 PRO A 52 GLN A 55 5 4 HELIX 3 AA3 ASN A 97 THR A 105 1 9 HELIX 4 AA4 ASN A 122 GLY A 131 1 10 HELIX 5 AA5 LEU A 133 ILE A 137 5 5 HELIX 6 AA6 GLY A 140 SER A 155 1 16 HELIX 7 AA7 GLN A 160 PHE A 181 1 22 HELIX 8 AA8 PHE A 181 TYR A 194 1 14 HELIX 9 AA9 ASP A 201 ASN A 209 1 9 HELIX 10 AB1 SER A 210 GLU A 220 1 11 HELIX 11 AB2 SER A 246 LEU A 248 5 3 HELIX 12 AB3 ASP B 62 LYS B 65 5 4 HELIX 13 AB4 LYS B 87 THR B 91 5 5 SHEET 1 AA1 6 ILE A 8 THR A 12 0 SHEET 2 AA1 6 PHE A 57 SER A 63 1 O LEU A 59 N ILE A 9 SHEET 3 AA1 6 SER A 69 ASP A 75 -1 O LEU A 72 N VAL A 60 SHEET 4 AA1 6 VAL A 81 ALA A 86 -1 O ARG A 85 N THR A 71 SHEET 5 AA1 6 SER A 89 PHE A 92 -1 O SER A 89 N ALA A 86 SHEET 6 AA1 6 ASN A 113 THR A 116 1 O ASN A 113 N ALA A 90 SHEET 1 AA2 2 VAL A 38 ARG A 39 0 SHEET 2 AA2 2 ILE A 42 PRO A 43 -1 O ILE A 42 N ARG A 39 SHEET 1 AA3 2 ALA A 225 GLN A 233 0 SHEET 2 AA3 2 LYS A 239 ASP A 244 -1 O TYR A 243 N PHE A 226 SHEET 1 AA4 4 GLN B 3 THR B 7 0 SHEET 2 AA4 4 LEU B 19 SER B 26 -1 O SER B 22 N THR B 7 SHEET 3 AA4 4 THR B 78 MET B 83 -1 O MET B 83 N LEU B 19 SHEET 4 AA4 4 PHE B 68 ASP B 73 -1 N THR B 69 O GLN B 82 SHEET 1 AA5 5 THR B 58 TYR B 60 0 SHEET 2 AA5 5 ARG B 46 ILE B 52 -1 N ASP B 51 O ASN B 59 SHEET 3 AA5 5 LEU B 32 GLN B 40 -1 N TRP B 37 O ALA B 50 SHEET 4 AA5 5 ALA B 92 GLY B 100 -1 O TYR B 95 N TYR B 38 SHEET 5 AA5 5 TYR B 108 TRP B 111 -1 O TYR B 110 N ALA B 98 SHEET 1 AA6 5 THR B 58 TYR B 60 0 SHEET 2 AA6 5 ARG B 46 ILE B 52 -1 N ASP B 51 O ASN B 59 SHEET 3 AA6 5 LEU B 32 GLN B 40 -1 N TRP B 37 O ALA B 50 SHEET 4 AA6 5 ALA B 92 GLY B 100 -1 O TYR B 95 N TYR B 38 SHEET 5 AA6 5 THR B 115 VAL B 117 -1 O THR B 115 N TYR B 94 SSBOND 1 CYS B 23 CYS B 96 1555 1555 2.03 SITE 1 AC1 4 ARG A 134 ILE A 137 GLN A 173 PRO A 200 CRYST1 102.654 102.654 156.876 90.00 90.00 90.00 I 4 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009741 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009741 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006374 0.00000