HEADER HYDROLASE/TOXIN 21-MAR-19 6OBU TITLE PP1 Y134K IN COMPLEX WITH MICROCYSTIN LR COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE/THREONINE-PROTEIN PHOSPHATASE PP1-ALPHA CATALYTIC COMPND 3 SUBUNIT; COMPND 4 CHAIN: A, B; COMPND 5 FRAGMENT: UNP RESIDUES 7-300; COMPND 6 SYNONYM: PP-1A, PROTEIN PHOSPHATASE 1; COMPND 7 EC: 3.1.3.16; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES; COMPND 10 MOL_ID: 2; COMPND 11 MOLECULE: MICROCYSTIN LR; COMPND 12 CHAIN: C, D SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PPP1CA, PPP1A; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: MICROCYSTIS AERUGINOSA; SOURCE 10 ORGANISM_TAXID: 1126 KEYWDS PHOSPHATASE, HYDROLASE-TOXIN COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.S.CHOY,T.M.MOON,J.A.BRAY,T.L.ARCHULETA,W.SHI,W.PETI,R.PAGE REVDAT 7 15-NOV-23 6OBU 1 LINK ATOM REVDAT 6 11-OCT-23 6OBU 1 LINK REVDAT 5 18-DEC-19 6OBU 1 REMARK REVDAT 4 23-OCT-19 6OBU 1 JRNL REVDAT 3 02-OCT-19 6OBU 1 JRNL REVDAT 2 25-SEP-19 6OBU 1 JRNL REVDAT 1 18-SEP-19 6OBU 0 JRNL AUTH M.S.CHOY,T.M.MOON,R.RAVINDRAN,J.A.BRAY,L.C.ROBINSON, JRNL AUTH 2 T.L.ARCHULETA,W.SHI,W.PETI,K.TATCHELL,R.PAGE JRNL TITL SDS22 SELECTIVELY RECOGNIZES AND TRAPS METAL-DEFICIENT JRNL TITL 2 INACTIVE PP1. JRNL REF PROC.NATL.ACAD.SCI.USA V. 116 20472 2019 JRNL REFN ESSN 1091-6490 JRNL PMID 31548429 JRNL DOI 10.1073/PNAS.1908718116 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.17 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 3 NUMBER OF REFLECTIONS : 49556 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.202 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.230 REMARK 3 FREE R VALUE TEST SET COUNT : 2589 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.1804 - 6.0504 1.00 3054 160 0.1708 0.1912 REMARK 3 2 6.0504 - 4.8049 1.00 3071 168 0.1676 0.2150 REMARK 3 3 4.8049 - 4.1983 1.00 3081 180 0.1326 0.1625 REMARK 3 4 4.1983 - 3.8147 1.00 3026 174 0.1379 0.1605 REMARK 3 5 3.8147 - 3.5415 1.00 3028 184 0.1400 0.1649 REMARK 3 6 3.5415 - 3.3328 1.00 3103 158 0.1398 0.1893 REMARK 3 7 3.3328 - 3.1660 1.00 3104 116 0.1446 0.1793 REMARK 3 8 3.1660 - 3.0282 1.00 3077 168 0.1538 0.1930 REMARK 3 9 3.0282 - 2.9117 1.00 3049 159 0.1483 0.2007 REMARK 3 10 2.9117 - 2.8112 1.00 3023 191 0.1605 0.2028 REMARK 3 11 2.8112 - 2.7233 1.00 3106 172 0.1509 0.2118 REMARK 3 12 2.7233 - 2.6455 1.00 3046 184 0.1634 0.2187 REMARK 3 13 2.6455 - 2.5759 1.00 3036 164 0.1646 0.1863 REMARK 3 14 2.5759 - 2.5130 1.00 3052 169 0.1655 0.2238 REMARK 3 15 2.5130 - 2.4559 1.00 3097 159 0.1723 0.2139 REMARK 3 16 2.4559 - 2.4037 0.99 3036 178 0.1800 0.2296 REMARK 3 17 2.4037 - 2.3556 1.00 3039 180 0.1645 0.1944 REMARK 3 18 2.3556 - 2.3111 1.00 3060 148 0.1749 0.2409 REMARK 3 19 2.3111 - 2.2699 1.00 3060 184 0.1858 0.2220 REMARK 3 20 2.2699 - 2.2314 1.00 3062 179 0.1833 0.2074 REMARK 3 21 2.2314 - 2.1954 1.00 3087 154 0.1836 0.2189 REMARK 3 22 2.1954 - 2.1616 1.00 3011 177 0.1900 0.2341 REMARK 3 23 2.1616 - 2.1298 1.00 3078 160 0.1947 0.2517 REMARK 3 24 2.1298 - 2.0998 0.98 3026 157 0.2154 0.2602 REMARK 3 25 2.0998 - 2.0715 0.95 2927 192 0.2323 0.2718 REMARK 3 26 2.0715 - 2.0446 0.92 2790 148 0.2435 0.2341 REMARK 3 27 2.0446 - 2.0190 0.88 2731 142 0.2455 0.3157 REMARK 3 28 2.0190 - 1.9947 0.85 2606 127 0.2545 0.3002 REMARK 3 29 1.9947 - 1.9715 0.81 2487 146 0.2672 0.2817 REMARK 3 30 1.9715 - 1.9493 0.75 2281 143 0.2901 0.3157 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.730 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 5062 REMARK 3 ANGLE : 0.900 6842 REMARK 3 CHIRALITY : 0.050 742 REMARK 3 PLANARITY : 0.007 891 REMARK 3 DIHEDRAL : 18.085 2979 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6OBU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-MAR-19. REMARK 100 THE DEPOSITION ID IS D_1000240409. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-JUL-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49637 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 40.170 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : 0.11700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.92500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: PDB ENTRY 4MOV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.62 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG6000, 1 M LITHIUM CHLORIDE, 0.1 REMARK 280 M MES, PH 6.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 32.67400 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 67.01900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.18100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 67.01900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 32.67400 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.18100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2360 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12030 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2050 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12220 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -30.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 REMARK 400 THE MICROCYSTIN LR IS OLIGOPEPTIDE, A MEMBER OF TOXIN CLASS. REMARK 400 REMARK 400 GROUP: 1 REMARK 400 NAME: MICROCYSTIN LR REMARK 400 CHAIN: C, D REMARK 400 COMPONENT_1: PEPTIDE LIKE POLYMER REMARK 400 DESCRIPTION: NULL REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 2 REMARK 465 HIS A 3 REMARK 465 MET A 4 REMARK 465 GLY A 5 REMARK 465 SER A 6 REMARK 465 ASP A 300 REMARK 465 GLY B 2 REMARK 465 HIS B 3 REMARK 465 MET B 4 REMARK 465 GLY B 5 REMARK 465 SER B 6 REMARK 465 ASP B 300 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 23 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 44 CG CD OE1 OE2 REMARK 470 GLU A 84 CG CD OE1 OE2 REMARK 470 LYS A 98 CD CE NZ REMARK 470 LYS A 211 CG CD CE NZ REMARK 470 GLN A 214 CG CD OE1 NE2 REMARK 470 GLU A 218 CG CD OE1 OE2 REMARK 470 LYS A 234 CG CD CE NZ REMARK 470 LYS A 260 CD CE NZ REMARK 470 GLU A 275 CG CD OE1 OE2 REMARK 470 ARG B 23 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 98 CD CE NZ REMARK 470 LYS B 211 CG CD CE NZ REMARK 470 GLU B 218 CG CD OE1 OE2 REMARK 470 ASP B 220 CG OD1 OD2 REMARK 470 GLU B 230 CG CD OE1 OE2 REMARK 470 LYS B 260 CD CE NZ REMARK 470 ASN B 271 CG OD1 ND2 REMARK 470 GLU B 275 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OXT FGA C 6 O HOH C 401 2.01 REMARK 500 O LEU A 7 O HOH A 501 2.04 REMARK 500 O HOH B 505 O HOH B 521 2.07 REMARK 500 O HOH B 599 O HOH B 654 2.11 REMARK 500 OE2 GLU B 32 O HOH B 501 2.12 REMARK 500 O HOH B 511 O HOH B 598 2.16 REMARK 500 NH2 ARG B 261 O HOH B 502 2.17 REMARK 500 O HOH A 566 O HOH A 604 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 607 O HOH B 649 3445 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 95 154.99 80.65 REMARK 500 ARG A 96 -57.20 71.90 REMARK 500 TYR A 144 -112.83 -134.23 REMARK 500 GLU A 167 17.09 57.93 REMARK 500 SER A 224 -152.07 64.59 REMARK 500 ALA A 247 -128.55 -132.94 REMARK 500 HIS A 248 -29.55 80.31 REMARK 500 ASP B 95 154.91 82.40 REMARK 500 ARG B 96 -56.46 71.60 REMARK 500 TYR B 144 -112.98 -132.97 REMARK 500 GLU B 167 17.39 58.13 REMARK 500 SER B 224 -152.41 63.30 REMARK 500 ALA B 247 -128.62 -132.42 REMARK 500 HIS B 248 -27.27 80.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 1ZN C 5 FGA C 6 140.02 REMARK 500 1ZN D 5 FGA D 6 141.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 1ZN C 5 -19.39 REMARK 500 1ZN D 5 -19.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 401 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 64 OD2 REMARK 620 2 HIS A 66 NE2 105.7 REMARK 620 3 ASP A 92 OD2 94.3 96.4 REMARK 620 4 HOH A 527 O 99.3 154.2 75.2 REMARK 620 5 HOH C 403 O 100.7 85.6 163.8 96.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 402 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 92 OD2 REMARK 620 2 ASN A 124 OD1 96.6 REMARK 620 3 HIS A 173 NE2 89.1 91.5 REMARK 620 4 HIS A 248 ND1 162.5 100.8 89.7 REMARK 620 5 HOH A 527 O 76.3 136.2 130.8 91.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 401 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 64 OD2 REMARK 620 2 HIS B 66 NE2 106.6 REMARK 620 3 ASP B 92 OD2 95.0 96.4 REMARK 620 4 HOH B 533 O 98.5 154.5 76.7 REMARK 620 5 HOH D 101 O 96.8 85.0 167.1 96.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 402 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 92 OD2 REMARK 620 2 ASN B 124 OD1 95.8 REMARK 620 3 HIS B 173 NE2 89.8 90.8 REMARK 620 4 HIS B 248 ND1 165.2 98.8 87.8 REMARK 620 5 HOH B 533 O 79.0 136.4 132.0 91.9 REMARK 620 N 1 2 3 4 DBREF 6OBU A 7 300 UNP P62136 PP1A_HUMAN 7 300 DBREF 6OBU B 7 300 UNP P62136 PP1A_HUMAN 7 300 DBREF 6OBU C 1 7 NOR 6OBU 6OBU 1 7 DBREF 6OBU D 1 7 NOR 6OBU 6OBU 1 7 SEQADV 6OBU GLY A 2 UNP P62136 EXPRESSION TAG SEQADV 6OBU HIS A 3 UNP P62136 EXPRESSION TAG SEQADV 6OBU MET A 4 UNP P62136 EXPRESSION TAG SEQADV 6OBU GLY A 5 UNP P62136 EXPRESSION TAG SEQADV 6OBU SER A 6 UNP P62136 EXPRESSION TAG SEQADV 6OBU LYS A 134 UNP P62136 TYR 134 ENGINEERED MUTATION SEQADV 6OBU GLY B 2 UNP P62136 EXPRESSION TAG SEQADV 6OBU HIS B 3 UNP P62136 EXPRESSION TAG SEQADV 6OBU MET B 4 UNP P62136 EXPRESSION TAG SEQADV 6OBU GLY B 5 UNP P62136 EXPRESSION TAG SEQADV 6OBU SER B 6 UNP P62136 EXPRESSION TAG SEQADV 6OBU LYS B 134 UNP P62136 TYR 134 ENGINEERED MUTATION SEQRES 1 A 299 GLY HIS MET GLY SER LEU ASN LEU ASP SER ILE ILE GLY SEQRES 2 A 299 ARG LEU LEU GLU VAL GLN GLY SER ARG PRO GLY LYS ASN SEQRES 3 A 299 VAL GLN LEU THR GLU ASN GLU ILE ARG GLY LEU CYS LEU SEQRES 4 A 299 LYS SER ARG GLU ILE PHE LEU SER GLN PRO ILE LEU LEU SEQRES 5 A 299 GLU LEU GLU ALA PRO LEU LYS ILE CYS GLY ASP ILE HIS SEQRES 6 A 299 GLY GLN TYR TYR ASP LEU LEU ARG LEU PHE GLU TYR GLY SEQRES 7 A 299 GLY PHE PRO PRO GLU SER ASN TYR LEU PHE LEU GLY ASP SEQRES 8 A 299 TYR VAL ASP ARG GLY LYS GLN SER LEU GLU THR ILE CYS SEQRES 9 A 299 LEU LEU LEU ALA TYR LYS ILE LYS TYR PRO GLU ASN PHE SEQRES 10 A 299 PHE LEU LEU ARG GLY ASN HIS GLU CYS ALA SER ILE ASN SEQRES 11 A 299 ARG ILE LYS GLY PHE TYR ASP GLU CYS LYS ARG ARG TYR SEQRES 12 A 299 ASN ILE LYS LEU TRP LYS THR PHE THR ASP CYS PHE ASN SEQRES 13 A 299 CYS LEU PRO ILE ALA ALA ILE VAL ASP GLU LYS ILE PHE SEQRES 14 A 299 CYS CYS HIS GLY GLY LEU SER PRO ASP LEU GLN SER MET SEQRES 15 A 299 GLU GLN ILE ARG ARG ILE MET ARG PRO THR ASP VAL PRO SEQRES 16 A 299 ASP GLN GLY LEU LEU CYS ASP LEU LEU TRP SER ASP PRO SEQRES 17 A 299 ASP LYS ASP VAL GLN GLY TRP GLY GLU ASN ASP ARG GLY SEQRES 18 A 299 VAL SER PHE THR PHE GLY ALA GLU VAL VAL ALA LYS PHE SEQRES 19 A 299 LEU HIS LYS HIS ASP LEU ASP LEU ILE CYS ARG ALA HIS SEQRES 20 A 299 GLN VAL VAL GLU ASP GLY TYR GLU PHE PHE ALA LYS ARG SEQRES 21 A 299 GLN LEU VAL THR LEU PHE SER ALA PRO ASN TYR CYS GLY SEQRES 22 A 299 GLU PHE ASP ASN ALA GLY ALA MET MET SER VAL ASP GLU SEQRES 23 A 299 THR LEU MET CYS SER PHE GLN ILE LEU LYS PRO ALA ASP SEQRES 1 B 299 GLY HIS MET GLY SER LEU ASN LEU ASP SER ILE ILE GLY SEQRES 2 B 299 ARG LEU LEU GLU VAL GLN GLY SER ARG PRO GLY LYS ASN SEQRES 3 B 299 VAL GLN LEU THR GLU ASN GLU ILE ARG GLY LEU CYS LEU SEQRES 4 B 299 LYS SER ARG GLU ILE PHE LEU SER GLN PRO ILE LEU LEU SEQRES 5 B 299 GLU LEU GLU ALA PRO LEU LYS ILE CYS GLY ASP ILE HIS SEQRES 6 B 299 GLY GLN TYR TYR ASP LEU LEU ARG LEU PHE GLU TYR GLY SEQRES 7 B 299 GLY PHE PRO PRO GLU SER ASN TYR LEU PHE LEU GLY ASP SEQRES 8 B 299 TYR VAL ASP ARG GLY LYS GLN SER LEU GLU THR ILE CYS SEQRES 9 B 299 LEU LEU LEU ALA TYR LYS ILE LYS TYR PRO GLU ASN PHE SEQRES 10 B 299 PHE LEU LEU ARG GLY ASN HIS GLU CYS ALA SER ILE ASN SEQRES 11 B 299 ARG ILE LYS GLY PHE TYR ASP GLU CYS LYS ARG ARG TYR SEQRES 12 B 299 ASN ILE LYS LEU TRP LYS THR PHE THR ASP CYS PHE ASN SEQRES 13 B 299 CYS LEU PRO ILE ALA ALA ILE VAL ASP GLU LYS ILE PHE SEQRES 14 B 299 CYS CYS HIS GLY GLY LEU SER PRO ASP LEU GLN SER MET SEQRES 15 B 299 GLU GLN ILE ARG ARG ILE MET ARG PRO THR ASP VAL PRO SEQRES 16 B 299 ASP GLN GLY LEU LEU CYS ASP LEU LEU TRP SER ASP PRO SEQRES 17 B 299 ASP LYS ASP VAL GLN GLY TRP GLY GLU ASN ASP ARG GLY SEQRES 18 B 299 VAL SER PHE THR PHE GLY ALA GLU VAL VAL ALA LYS PHE SEQRES 19 B 299 LEU HIS LYS HIS ASP LEU ASP LEU ILE CYS ARG ALA HIS SEQRES 20 B 299 GLN VAL VAL GLU ASP GLY TYR GLU PHE PHE ALA LYS ARG SEQRES 21 B 299 GLN LEU VAL THR LEU PHE SER ALA PRO ASN TYR CYS GLY SEQRES 22 B 299 GLU PHE ASP ASN ALA GLY ALA MET MET SER VAL ASP GLU SEQRES 23 B 299 THR LEU MET CYS SER PHE GLN ILE LEU LYS PRO ALA ASP SEQRES 1 C 7 DAL LEU ACB ARG 1ZN FGA DAM SEQRES 1 D 7 DAL LEU ACB ARG 1ZN FGA DAM HET DAL C 1 5 HET ACB C 3 9 HET 1ZN C 5 23 HET FGA C 6 9 HET DAM C 7 6 HET DAL D 1 5 HET ACB D 3 9 HET 1ZN D 5 23 HET FGA D 6 9 HET DAM D 7 6 HET MN A 401 1 HET MN A 402 1 HET GOL A 403 6 HET GOL A 404 6 HET GOL A 405 6 HET GOL A 406 6 HET GOL A 407 6 HET DMS A 408 4 HET MN B 401 1 HET MN B 402 1 HET GOL B 403 6 HET GOL B 404 6 HET CL B 405 1 HETNAM DAL D-ALANINE HETNAM ACB 3-METHYL-BETA-D-ASPARTIC ACID HETNAM 1ZN (2S,3S,4E,6E,8S,9S)-3-AMINO-9-METHOXY-2,6,8-TRIMETHYL- HETNAM 2 1ZN 10-PHENYLDECA-4,6-DIENOIC ACID HETNAM FGA GAMMA-D-GLUTAMIC ACID HETNAM DAM N-METHYL-ALPHA-BETA-DEHYDROALANINE HETNAM MN MANGANESE (II) ION HETNAM GOL GLYCEROL HETNAM DMS DIMETHYL SULFOXIDE HETNAM CL CHLORIDE ION HETSYN ACB (3S)-3-METHYL-D-ASPARTIC ACID; D-METHYL ASPARTIC ACID HETSYN FGA D-GLUTAMIC ACID HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 DAL 2(C3 H7 N O2) FORMUL 3 ACB 2(C5 H9 N O4) FORMUL 3 1ZN 2(C20 H29 N O3) FORMUL 3 FGA 2(C5 H9 N O4) FORMUL 3 DAM 2(C4 H7 N O2) FORMUL 5 MN 4(MN 2+) FORMUL 7 GOL 7(C3 H8 O3) FORMUL 12 DMS C2 H6 O S FORMUL 17 CL CL 1- FORMUL 18 HOH *342(H2 O) HELIX 1 AA1 ASN A 8 GLU A 18 1 11 HELIX 2 AA2 THR A 31 GLN A 49 1 19 HELIX 3 AA3 GLN A 68 GLY A 80 1 13 HELIX 4 AA4 GLN A 99 TYR A 114 1 16 HELIX 5 AA5 CYS A 127 ARG A 132 1 6 HELIX 6 AA6 GLY A 135 TYR A 144 1 10 HELIX 7 AA7 ASN A 145 ASN A 157 1 13 HELIX 8 AA8 SER A 182 ARG A 188 1 7 HELIX 9 AA9 GLY A 199 SER A 207 1 9 HELIX 10 AB1 GLY A 228 ASP A 240 1 13 HELIX 11 AB2 ASN B 8 GLU B 18 1 11 HELIX 12 AB3 THR B 31 GLN B 49 1 19 HELIX 13 AB4 GLN B 68 GLY B 80 1 13 HELIX 14 AB5 GLN B 99 TYR B 114 1 16 HELIX 15 AB6 CYS B 127 ARG B 132 1 6 HELIX 16 AB7 GLY B 135 TYR B 144 1 10 HELIX 17 AB8 ASN B 145 ASN B 157 1 13 HELIX 18 AB9 SER B 182 ARG B 188 1 7 HELIX 19 AC1 GLY B 199 SER B 207 1 9 HELIX 20 AC2 GLY B 228 ASP B 240 1 13 SHEET 1 AA1 6 LEU A 52 LEU A 55 0 SHEET 2 AA1 6 ALA A 162 VAL A 165 1 O ALA A 162 N LEU A 53 SHEET 3 AA1 6 ILE A 169 CYS A 172 -1 O CYS A 171 N ALA A 163 SHEET 4 AA1 6 LEU A 243 ARG A 246 1 O CYS A 245 N PHE A 170 SHEET 5 AA1 6 LEU A 263 LEU A 266 1 O LEU A 266 N ARG A 246 SHEET 6 AA1 6 TYR A 255 PHE A 258 -1 N PHE A 258 O LEU A 263 SHEET 1 AA2 5 PHE A 118 LEU A 120 0 SHEET 2 AA2 5 TYR A 87 PHE A 89 1 N PHE A 89 O PHE A 119 SHEET 3 AA2 5 LEU A 59 CYS A 62 1 N LYS A 60 O LEU A 88 SHEET 4 AA2 5 GLY A 280 VAL A 285 -1 O MET A 283 N ILE A 61 SHEET 5 AA2 5 CYS A 291 LEU A 296 -1 O LEU A 296 N GLY A 280 SHEET 1 AA3 3 ASP A 208 PRO A 209 0 SHEET 2 AA3 3 PHE A 225 PHE A 227 1 O PHE A 227 N ASP A 208 SHEET 3 AA3 3 TRP A 216 GLU A 218 -1 N GLY A 217 O THR A 226 SHEET 1 AA4 6 LEU B 52 LEU B 55 0 SHEET 2 AA4 6 ALA B 162 VAL B 165 1 O ALA B 162 N LEU B 53 SHEET 3 AA4 6 ILE B 169 CYS B 172 -1 O CYS B 171 N ALA B 163 SHEET 4 AA4 6 LEU B 243 ARG B 246 1 O CYS B 245 N PHE B 170 SHEET 5 AA4 6 LEU B 263 LEU B 266 1 O VAL B 264 N ARG B 246 SHEET 6 AA4 6 TYR B 255 PHE B 258 -1 N GLU B 256 O THR B 265 SHEET 1 AA5 5 PHE B 118 LEU B 120 0 SHEET 2 AA5 5 TYR B 87 PHE B 89 1 N PHE B 89 O PHE B 119 SHEET 3 AA5 5 LEU B 59 CYS B 62 1 N LYS B 60 O LEU B 88 SHEET 4 AA5 5 GLY B 280 VAL B 285 -1 O VAL B 285 N LEU B 59 SHEET 5 AA5 5 CYS B 291 LEU B 296 -1 O LEU B 296 N GLY B 280 SHEET 1 AA6 3 ASP B 208 PRO B 209 0 SHEET 2 AA6 3 PHE B 225 PHE B 227 1 O PHE B 225 N ASP B 208 SHEET 3 AA6 3 TRP B 216 GLU B 218 -1 N GLY B 217 O THR B 226 LINK SG CYS A 273 CB DAM C 7 1555 1555 1.77 LINK SG CYS B 273 CB DAM D 7 1555 1555 1.75 LINK C DAL C 1 N LEU C 2 1555 1555 1.37 LINK N DAL C 1 C DAM C 7 1555 1555 1.40 LINK C LEU C 2 N ACB C 3 1555 1555 1.36 LINK CG ACB C 3 N ARG C 4 1555 1555 1.41 LINK C ARG C 4 N 1ZN C 5 1555 1555 1.41 LINK C 1ZN C 5 N FGA C 6 1555 1555 1.37 LINK CD FGA C 6 N DAM C 7 1555 1555 1.43 LINK C DAL D 1 N LEU D 2 1555 1555 1.37 LINK N DAL D 1 C DAM D 7 1555 1555 1.41 LINK C LEU D 2 N ACB D 3 1555 1555 1.36 LINK CG ACB D 3 N ARG D 4 1555 1555 1.41 LINK C ARG D 4 N 1ZN D 5 1555 1555 1.40 LINK C 1ZN D 5 N FGA D 6 1555 1555 1.37 LINK CD FGA D 6 N DAM D 7 1555 1555 1.46 LINK OD2 ASP A 64 MN MN A 401 1555 1555 2.08 LINK NE2 HIS A 66 MN MN A 401 1555 1555 2.21 LINK OD2 ASP A 92 MN MN A 401 1555 1555 2.19 LINK OD2 ASP A 92 MN MN A 402 1555 1555 2.23 LINK OD1 ASN A 124 MN MN A 402 1555 1555 2.11 LINK NE2 HIS A 173 MN MN A 402 1555 1555 2.14 LINK ND1 HIS A 248 MN MN A 402 1555 1555 2.31 LINK MN MN A 401 O HOH A 527 1555 1555 2.06 LINK MN MN A 401 O HOH C 403 1555 1555 2.20 LINK MN MN A 402 O HOH A 527 1555 1555 1.94 LINK OD2 ASP B 64 MN MN B 401 1555 1555 2.13 LINK NE2 HIS B 66 MN MN B 401 1555 1555 2.24 LINK OD2 ASP B 92 MN MN B 401 1555 1555 2.18 LINK OD2 ASP B 92 MN MN B 402 1555 1555 2.24 LINK OD1 ASN B 124 MN MN B 402 1555 1555 2.14 LINK NE2 HIS B 173 MN MN B 402 1555 1555 2.13 LINK ND1 HIS B 248 MN MN B 402 1555 1555 2.26 LINK MN MN B 401 O HOH B 533 1555 1555 2.08 LINK MN MN B 401 O HOH D 101 1555 1555 2.23 LINK MN MN B 402 O HOH B 533 1555 1555 1.91 CISPEP 1 ALA A 57 PRO A 58 0 3.11 CISPEP 2 PRO A 82 PRO A 83 0 5.48 CISPEP 3 ARG A 191 PRO A 192 0 -0.96 CISPEP 4 ALA B 57 PRO B 58 0 2.80 CISPEP 5 PRO B 82 PRO B 83 0 6.14 CISPEP 6 ARG B 191 PRO B 192 0 2.10 CRYST1 65.348 78.362 134.038 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015303 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012761 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007461 0.00000