HEADER BIOSYNTHETIC PROTEIN 26-MAR-19 6ODD TITLE CRYSTAL STRUCTURE OF THE HUMAN COMPLEX ACP-ISD11 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACYL CARRIER PROTEIN, MITOCHONDRIAL; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ACP,CI-SDAP,NADH-UBIQUINONE OXIDOREDUCTASE 9.6 KDA SUBUNIT; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: LYR MOTIF-CONTAINING PROTEIN 4; COMPND 8 CHAIN: B; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NDUFAB1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: LYRM4, C6ORF149, ISD11, CGI-203; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS IRON SULFUR CLUSTERS, CYSTEINE DESULFURASE ACTIVITY REGULATOR, KEYWDS 2 BIOSYNTHETIC PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.G.HERRERA,M.E.NOGUERA,S.KLINKE,J.SANTOS REVDAT 3 11-OCT-23 6ODD 1 LINK REVDAT 2 04-DEC-19 6ODD 1 JRNL REVDAT 1 27-NOV-19 6ODD 0 JRNL AUTH M.G.HERRERA,M.E.NOGUERA,K.E.SEWELL,W.A.AGUDELO SUAREZ, JRNL AUTH 2 L.CAPECE,S.KLINKE,J.SANTOS JRNL TITL STRUCTURE OF THE HUMAN ACP-ISD11 HETERODIMER. JRNL REF BIOCHEMISTRY V. 58 4596 2019 JRNL REFN ISSN 0006-2960 JRNL PMID 31664822 JRNL DOI 10.1021/ACS.BIOCHEM.9B00539 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.55 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 21226 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.216 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1061 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.5646 - 3.9907 1.00 2621 138 0.1688 0.1904 REMARK 3 2 3.9907 - 3.1678 1.00 2541 134 0.1845 0.2024 REMARK 3 3 3.1678 - 2.7674 1.00 2524 133 0.2197 0.2348 REMARK 3 4 2.7674 - 2.5144 1.00 2514 132 0.2165 0.2571 REMARK 3 5 2.5144 - 2.3342 1.00 2504 132 0.2008 0.2336 REMARK 3 6 2.3342 - 2.1966 1.00 2502 132 0.2223 0.2569 REMARK 3 7 2.1966 - 2.0866 1.00 2502 132 0.2442 0.2806 REMARK 3 8 2.0866 - 1.9958 0.98 2457 128 0.3030 0.3431 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.740 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 53.19 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 66.63 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN 'A' AND RESID 5 THROUGH 89) REMARK 3 ORIGIN FOR THE GROUP (A): 17.6985 60.7183 14.3802 REMARK 3 T TENSOR REMARK 3 T11: 0.4490 T22: 0.4926 REMARK 3 T33: 0.4813 T12: 0.0603 REMARK 3 T13: -0.0582 T23: 0.0606 REMARK 3 L TENSOR REMARK 3 L11: 2.7794 L22: 3.7546 REMARK 3 L33: 4.2837 L12: -0.5304 REMARK 3 L13: -1.1872 L23: 1.5541 REMARK 3 S TENSOR REMARK 3 S11: 0.0714 S12: -0.0359 S13: -0.1694 REMARK 3 S21: 0.1181 S22: -0.1278 S23: 0.0887 REMARK 3 S31: -0.2237 S32: -0.4385 S33: 0.0185 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN 'B' AND RESID 18 THROUGH 91) REMARK 3 ORIGIN FOR THE GROUP (A): 38.4392 51.4358 11.3056 REMARK 3 T TENSOR REMARK 3 T11: 0.3932 T22: 0.3817 REMARK 3 T33: 0.5306 T12: 0.0307 REMARK 3 T13: -0.0819 T23: 0.0558 REMARK 3 L TENSOR REMARK 3 L11: 5.0686 L22: 2.2922 REMARK 3 L33: 3.6733 L12: -0.9168 REMARK 3 L13: 1.6800 L23: -0.0144 REMARK 3 S TENSOR REMARK 3 S11: 0.0897 S12: 0.0717 S13: -0.4498 REMARK 3 S21: 0.1270 S22: 0.0148 S23: -0.2241 REMARK 3 S31: 0.1348 S32: 0.2500 S33: -0.1105 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6ODD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-MAR-19. REMARK 100 THE DEPOSITION ID IS D_1000240430. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-FEB-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9801 REMARK 200 MONOCHROMATOR : CRYOGENICALLY COOLED CHANNEL CUT REMARK 200 SI[111] CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : CONVEX PREFOCUSSING MIRROR AND A REMARK 200 KIRKPATRICK-BAEZ PAIR OF REMARK 200 FOCUSSING MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21240 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 43.553 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 39.69 REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 32.5400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.12 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.3 REMARK 200 DATA REDUNDANCY IN SHELL : 39.38 REMARK 200 R MERGE FOR SHELL (I) : 1.80400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.530 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MORDA REMARK 200 STARTING MODEL: 5WGB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.05 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: THE DROP WAS A 1:1 MIX OF PROTEIN (IN REMARK 280 10 MM TRIS BUFFER, 25 MM NACL, PH 7.5) AND RESERVOIR SOLUTION REMARK 280 (0.1 M TRIS PH 9.1, 0.1 M CACL2, 23% TERT-BUTANOL), VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X,-Y+1/2,Z REMARK 290 15555 -X+1/2,Y,-Z REMARK 290 16555 X,-Y,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z,-X,-Y+1/2 REMARK 290 19555 -Z,-X+1/2,Y REMARK 290 20555 -Z+1/2,X,-Y REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z,-X REMARK 290 23555 Y,-Z,-X+1/2 REMARK 290 24555 -Y,-Z+1/2,X REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 61.59500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.59500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 61.59500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 61.59500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 61.59500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 61.59500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 61.59500 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 61.59500 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 61.59500 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 61.59500 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 61.59500 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 61.59500 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 61.59500 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 61.59500 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 61.59500 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 61.59500 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 61.59500 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 61.59500 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 61.59500 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 61.59500 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 61.59500 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 61.59500 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 61.59500 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 61.59500 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 61.59500 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 61.59500 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 61.59500 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 61.59500 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 61.59500 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 61.59500 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 61.59500 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 61.59500 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 61.59500 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 61.59500 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 61.59500 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 61.59500 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19000 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -46.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 123.19000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 61.59500 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2300 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9740 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 422 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 417 O HOH A 417 16565 2.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP B 61 106.93 -48.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 302 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 83 O REMARK 620 2 ASP A 83 OD1 74.8 REMARK 620 3 ASP A 83 OD1 74.8 0.0 REMARK 620 4 ASP A 83 OD2 76.4 12.3 12.3 REMARK 620 5 ASP A 86 OD1 81.7 156.0 156.0 156.8 REMARK 620 6 HOH A 417 O 85.2 90.4 90.4 78.4 92.3 REMARK 620 7 HOH A 419 O 94.9 87.1 87.1 99.1 90.4 177.3 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 8Q1 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 302 DBREF 6ODD A 5 89 UNP O14561 ACPM_HUMAN 72 156 DBREF 6ODD B 18 91 UNP Q9HD34 LYRM4_HUMAN 5 78 SEQRES 1 A 85 PRO PRO LEU THR LEU GLU GLY ILE GLN ASP ARG VAL LEU SEQRES 2 A 85 TYR VAL LEU LYS LEU TYR ASP LYS ILE ASP PRO GLU LYS SEQRES 3 A 85 LEU SER VAL ASN SER HIS PHE MET LYS ASP LEU GLY LEU SEQRES 4 A 85 ASP SER LEU ASP GLN VAL GLU ILE ILE MET ALA MET GLU SEQRES 5 A 85 ASP GLU PHE GLY PHE GLU ILE PRO ASP ILE ASP ALA GLU SEQRES 6 A 85 LYS LEU MET CYS PRO GLN GLU ILE VAL ASP TYR ILE ALA SEQRES 7 A 85 ASP LYS LYS ASP VAL TYR GLU SEQRES 1 B 74 SER ARG ALA GLN VAL LEU SER LEU TYR ARG ALA MET LEU SEQRES 2 B 74 ARG GLU SER LYS ARG PHE SER ALA TYR ASN TYR ARG THR SEQRES 3 B 74 TYR ALA VAL ARG ARG ILE ARG ASP ALA PHE ARG GLU ASN SEQRES 4 B 74 LYS ASN VAL LYS ASP PRO VAL GLU ILE GLN THR LEU VAL SEQRES 5 B 74 ASN LYS ALA LYS ARG ASP LEU GLY VAL ILE ARG ARG GLN SEQRES 6 B 74 VAL HIS ILE GLY GLN LEU TYR SER THR HET 8Q1 A 301 77 HET CA A 302 1 HETNAM 8Q1 S-[2-({N-[(2R)-2-HYDROXY-3,3-DIMETHYL-4-(PHOSPHONOOXY) HETNAM 2 8Q1 BUTANOYL]-BETA-ALANYL}AMINO)ETHYL] DODECANETHIOATE HETNAM CA CALCIUM ION HETSYN 8Q1 S-DODECANOYL-4'-PHOSPHOPANTETHEINE FORMUL 3 8Q1 C23 H45 N2 O8 P S FORMUL 4 CA CA 2+ FORMUL 5 HOH *29(H2 O) HELIX 1 AA1 THR A 8 LEU A 22 1 15 HELIX 2 AA2 ASP A 27 LEU A 31 5 5 HELIX 3 AA3 ASP A 44 GLY A 60 1 17 HELIX 4 AA4 PRO A 64 GLU A 69 1 6 HELIX 5 AA5 CYS A 73 LYS A 85 1 13 HELIX 6 AA6 ARG B 19 LYS B 34 1 16 HELIX 7 AA7 ALA B 38 GLU B 55 1 18 HELIX 8 AA8 ASP B 61 TYR B 89 1 29 LINK OG SER A 45 P24 8Q1 A 301 1555 1555 1.56 LINK O ASP A 83 CA CA A 302 1555 1555 2.40 LINK OD1 ASP A 83 CA CA A 302 1555 1555 2.47 LINK OD1 ASP A 83 CA CA A 302 1555 16565 2.59 LINK OD2 ASP A 83 CA CA A 302 1555 16565 2.60 LINK OD1 ASP A 86 CA CA A 302 1555 1555 2.35 LINK CA CA A 302 O HOH A 417 1555 16565 2.27 LINK CA CA A 302 O HOH A 419 1555 1555 2.32 SITE 1 AC1 13 ASP A 44 SER A 45 HOH A 406 ARG B 19 SITE 2 AC1 13 VAL B 22 MET B 29 ALA B 52 ASN B 56 SITE 3 AC1 13 LYS B 57 VAL B 59 ILE B 65 LEU B 68 SITE 4 AC1 13 ASP B 75 SITE 1 AC2 4 ASP A 83 ASP A 86 HOH A 417 HOH A 419 CRYST1 123.190 123.190 123.190 90.00 90.00 90.00 I 21 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008118 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008118 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008118 0.00000