HEADER UNKNOWN FUNCTION 27-MAR-19 6OE6 TITLE STRUCTURE OF A UNCHARACTERIZED PROTEIN FROM LEPTOSPIRA INTERROGANS TITLE 2 SEROGROUP ICTEROHAEMORRHAGIAE SEROVAR COPENHAGENI (STRAIN FIOCRUZ L1- TITLE 3 130) COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 29-171; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEPTOSPIRA INTERROGANS SEROGROUP SOURCE 3 ICTEROHAEMORRHAGIAE SEROVAR COPENHAGENI (STRAIN FIOCRUZ L1-130); SOURCE 4 ORGANISM_TAXID: 267671; SOURCE 5 STRAIN: FIOCRUZ L1-130; SOURCE 6 GENE: LIC_12238; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: LPINA.19858.A.B2 KEYWDS SSGCID, LEPTOSPIROSIS, STRUCTURAL GENOMICS, SEATTLE STRUCTURAL KEYWDS 2 GENOMICS CENTER FOR INFECTIOUS DISEASE, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 2 13-MAR-24 6OE6 1 LINK REVDAT 1 17-APR-19 6OE6 0 JRNL AUTH J.ABENDROTH,S.J.MAYCLIN,D.D.LORIMER,P.S.HORANYI,T.E.EDWARDS JRNL TITL STRUCTURE OF AN UNCHARACTERIZED PROTEIN FROM LEPTOSPIRA JRNL TITL 2 INTERROGANS SEROGROUP ICTEROHAEMORRHAGIAE SEROVAR JRNL TITL 3 COPENHAGENI (STRAIN FIOCRUZ L1-130) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.15RC1_3423) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.12 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.010 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 31339 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.178 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.208 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.190 REMARK 3 FREE R VALUE TEST SET COUNT : 1941 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.1336 - 4.0963 0.99 2084 135 0.1583 0.1997 REMARK 3 2 4.0963 - 3.2518 1.00 2120 109 0.1532 0.1440 REMARK 3 3 3.2518 - 2.8409 1.00 2094 126 0.1774 0.2050 REMARK 3 4 2.8409 - 2.5812 1.00 2116 136 0.1826 0.2359 REMARK 3 5 2.5812 - 2.3962 1.00 2100 138 0.1929 0.2262 REMARK 3 6 2.3962 - 2.2550 1.00 2066 173 0.1867 0.2348 REMARK 3 7 2.2550 - 2.1420 1.00 2143 96 0.1824 0.2440 REMARK 3 8 2.1420 - 2.0488 1.00 2125 130 0.1888 0.2171 REMARK 3 9 2.0488 - 1.9699 1.00 2065 168 0.1881 0.2283 REMARK 3 10 1.9699 - 1.9019 1.00 2095 141 0.1957 0.2367 REMARK 3 11 1.9019 - 1.8425 1.00 2092 148 0.1978 0.2293 REMARK 3 12 1.8425 - 1.7898 1.00 2078 157 0.2153 0.2357 REMARK 3 13 1.7898 - 1.7427 1.00 2067 158 0.2374 0.2747 REMARK 3 14 1.7427 - 1.7002 1.00 2153 126 0.2664 0.3265 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.760 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 36.57 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.39 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 1935 REMARK 3 ANGLE : 0.872 2631 REMARK 3 CHIRALITY : 0.064 300 REMARK 3 PLANARITY : 0.005 336 REMARK 3 DIHEDRAL : 15.537 1165 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 14 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 33 THROUGH 41 ) REMARK 3 ORIGIN FOR THE GROUP (A): 67.0803 18.7916 14.5901 REMARK 3 T TENSOR REMARK 3 T11: 0.2907 T22: 0.4334 REMARK 3 T33: 0.3694 T12: 0.0985 REMARK 3 T13: 0.0347 T23: 0.0636 REMARK 3 L TENSOR REMARK 3 L11: 3.5165 L22: 2.6412 REMARK 3 L33: 9.2485 L12: 2.8622 REMARK 3 L13: -0.6806 L23: -2.0598 REMARK 3 S TENSOR REMARK 3 S11: -0.0898 S12: -0.0887 S13: -0.3522 REMARK 3 S21: -0.4312 S22: -0.4367 S23: -1.0704 REMARK 3 S31: 0.8923 S32: 1.1441 S33: 0.5511 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 42 THROUGH 58 ) REMARK 3 ORIGIN FOR THE GROUP (A): 71.7301 25.3969 6.2220 REMARK 3 T TENSOR REMARK 3 T11: 0.6039 T22: 0.7467 REMARK 3 T33: 0.6578 T12: -0.0109 REMARK 3 T13: 0.2819 T23: 0.1296 REMARK 3 L TENSOR REMARK 3 L11: 8.5894 L22: 0.5370 REMARK 3 L33: 8.1756 L12: 2.1453 REMARK 3 L13: 2.9347 L23: 0.6476 REMARK 3 S TENSOR REMARK 3 S11: 0.6100 S12: 1.0133 S13: 0.2446 REMARK 3 S21: -0.4680 S22: 0.4088 S23: -0.3082 REMARK 3 S31: -0.9535 S32: 2.0156 S33: -0.2285 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 59 THROUGH 66 ) REMARK 3 ORIGIN FOR THE GROUP (A): 68.3599 18.9450 19.0840 REMARK 3 T TENSOR REMARK 3 T11: 0.3049 T22: 0.5386 REMARK 3 T33: 0.2868 T12: 0.0734 REMARK 3 T13: -0.0288 T23: 0.1279 REMARK 3 L TENSOR REMARK 3 L11: 3.6837 L22: 6.4494 REMARK 3 L33: 2.4566 L12: -0.8226 REMARK 3 L13: 0.3886 L23: 1.6464 REMARK 3 S TENSOR REMARK 3 S11: -0.0317 S12: -0.6375 S13: -0.0463 REMARK 3 S21: 0.5006 S22: 0.1964 S23: -0.2436 REMARK 3 S31: 0.3431 S32: 0.7670 S33: -0.0559 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 67 THROUGH 79 ) REMARK 3 ORIGIN FOR THE GROUP (A): 65.3555 25.2692 13.3244 REMARK 3 T TENSOR REMARK 3 T11: 0.2155 T22: 0.3740 REMARK 3 T33: 0.2488 T12: -0.0209 REMARK 3 T13: 0.0080 T23: 0.0760 REMARK 3 L TENSOR REMARK 3 L11: 4.5905 L22: 3.2659 REMARK 3 L33: 7.1102 L12: 2.0857 REMARK 3 L13: 0.1540 L23: 3.2150 REMARK 3 S TENSOR REMARK 3 S11: -0.0680 S12: -0.0146 S13: 0.0461 REMARK 3 S21: -0.3399 S22: -0.0881 S23: -0.5944 REMARK 3 S31: -0.1978 S32: 0.8772 S33: 0.1012 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 80 THROUGH 89 ) REMARK 3 ORIGIN FOR THE GROUP (A): 59.7885 5.6069 5.3468 REMARK 3 T TENSOR REMARK 3 T11: 0.6857 T22: 0.4780 REMARK 3 T33: 0.5893 T12: 0.1177 REMARK 3 T13: 0.0936 T23: -0.1266 REMARK 3 L TENSOR REMARK 3 L11: 4.1518 L22: 7.1982 REMARK 3 L33: 3.6295 L12: -0.3441 REMARK 3 L13: 2.1257 L23: 2.8005 REMARK 3 S TENSOR REMARK 3 S11: 0.0911 S12: 1.1539 S13: -0.7346 REMARK 3 S21: 0.1184 S22: -0.3435 S23: 0.2037 REMARK 3 S31: 1.4432 S32: 0.1839 S33: -0.1610 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 90 THROUGH 99 ) REMARK 3 ORIGIN FOR THE GROUP (A): 50.8983 21.9547 15.5049 REMARK 3 T TENSOR REMARK 3 T11: 0.2707 T22: 0.2522 REMARK 3 T33: 0.2963 T12: -0.0308 REMARK 3 T13: 0.0244 T23: -0.0449 REMARK 3 L TENSOR REMARK 3 L11: 4.6900 L22: 5.8226 REMARK 3 L33: 4.3115 L12: -4.4933 REMARK 3 L13: -4.4132 L23: 4.1151 REMARK 3 S TENSOR REMARK 3 S11: 0.2210 S12: 0.3263 S13: -0.2060 REMARK 3 S21: -0.2763 S22: -0.2328 S23: 0.3056 REMARK 3 S31: -0.0527 S32: -0.4337 S33: 0.0315 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 100 THROUGH 109 ) REMARK 3 ORIGIN FOR THE GROUP (A): 50.3593 20.8468 11.0371 REMARK 3 T TENSOR REMARK 3 T11: 0.2294 T22: 0.2925 REMARK 3 T33: 0.2386 T12: -0.0216 REMARK 3 T13: -0.0263 T23: -0.0532 REMARK 3 L TENSOR REMARK 3 L11: 7.6987 L22: 8.9516 REMARK 3 L33: 3.2444 L12: -4.8813 REMARK 3 L13: -4.2341 L23: 4.8464 REMARK 3 S TENSOR REMARK 3 S11: 0.0293 S12: 0.9285 S13: -0.4912 REMARK 3 S21: -0.5109 S22: -0.5412 S23: 0.6693 REMARK 3 S31: 0.0129 S32: -0.3901 S33: 0.6828 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 110 THROUGH 116 ) REMARK 3 ORIGIN FOR THE GROUP (A): 65.1053 8.7027 2.6838 REMARK 3 T TENSOR REMARK 3 T11: 0.5371 T22: 0.2574 REMARK 3 T33: 0.3712 T12: 0.0900 REMARK 3 T13: 0.1401 T23: -0.0284 REMARK 3 L TENSOR REMARK 3 L11: 4.8257 L22: 3.9205 REMARK 3 L33: 8.5172 L12: -3.8762 REMARK 3 L13: -5.8790 L23: 5.4255 REMARK 3 S TENSOR REMARK 3 S11: -0.0292 S12: 0.0970 S13: -0.3690 REMARK 3 S21: -0.0264 S22: -0.0748 S23: 0.0915 REMARK 3 S31: 0.4337 S32: -0.5123 S33: 0.0484 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 117 THROUGH 149 ) REMARK 3 ORIGIN FOR THE GROUP (A): 57.5949 19.6963 14.5561 REMARK 3 T TENSOR REMARK 3 T11: 0.2075 T22: 0.1963 REMARK 3 T33: 0.1829 T12: -0.0134 REMARK 3 T13: 0.0325 T23: 0.0013 REMARK 3 L TENSOR REMARK 3 L11: 4.9524 L22: 7.4764 REMARK 3 L33: 5.8868 L12: -1.4948 REMARK 3 L13: -1.1071 L23: -0.5141 REMARK 3 S TENSOR REMARK 3 S11: -0.1252 S12: -0.0967 S13: -0.3714 REMARK 3 S21: 0.1365 S22: -0.1848 S23: 0.3467 REMARK 3 S31: 0.4731 S32: 0.3084 S33: 0.1717 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 150 THROUGH 168 ) REMARK 3 ORIGIN FOR THE GROUP (A): 61.4420 35.6460 29.3440 REMARK 3 T TENSOR REMARK 3 T11: 1.5348 T22: 0.8212 REMARK 3 T33: 1.0012 T12: 0.0596 REMARK 3 T13: -0.0936 T23: -0.0549 REMARK 3 L TENSOR REMARK 3 L11: 8.3572 L22: 3.2291 REMARK 3 L33: 4.7576 L12: 2.1115 REMARK 3 L13: -1.7127 L23: 1.8779 REMARK 3 S TENSOR REMARK 3 S11: -1.2921 S12: -0.1024 S13: -1.0246 REMARK 3 S21: -0.1283 S22: 0.1479 S23: 0.3102 REMARK 3 S31: 0.7275 S32: 0.1821 S33: 0.8445 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 33 THROUGH 66 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.9970 17.5978 30.5888 REMARK 3 T TENSOR REMARK 3 T11: 0.3945 T22: 0.4467 REMARK 3 T33: 0.3274 T12: -0.1589 REMARK 3 T13: -0.0502 T23: 0.0783 REMARK 3 L TENSOR REMARK 3 L11: 8.7221 L22: 3.8747 REMARK 3 L33: 5.4547 L12: 0.1616 REMARK 3 L13: 0.8953 L23: -2.1428 REMARK 3 S TENSOR REMARK 3 S11: 0.1993 S12: -0.1622 S13: -0.5626 REMARK 3 S21: -0.3211 S22: 0.1392 S23: 0.4116 REMARK 3 S31: 1.2326 S32: -1.1650 S33: -0.2043 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 67 THROUGH 99 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.6772 26.6091 28.8766 REMARK 3 T TENSOR REMARK 3 T11: 0.1658 T22: 0.2641 REMARK 3 T33: 0.2049 T12: -0.0169 REMARK 3 T13: -0.0052 T23: 0.0342 REMARK 3 L TENSOR REMARK 3 L11: 5.5983 L22: 2.9660 REMARK 3 L33: 4.4855 L12: 1.2995 REMARK 3 L13: 1.3340 L23: -0.9305 REMARK 3 S TENSOR REMARK 3 S11: -0.1949 S12: 0.1281 S13: 0.3165 REMARK 3 S21: -0.2511 S22: 0.2678 S23: 0.3287 REMARK 3 S31: 0.1395 S32: -0.6119 S33: 0.0042 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 100 THROUGH 116 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.0203 31.0288 25.4567 REMARK 3 T TENSOR REMARK 3 T11: 0.2256 T22: 0.3720 REMARK 3 T33: 0.3048 T12: -0.0096 REMARK 3 T13: -0.0550 T23: 0.0501 REMARK 3 L TENSOR REMARK 3 L11: 8.3240 L22: 1.8926 REMARK 3 L33: 3.6219 L12: 2.5672 REMARK 3 L13: 3.4017 L23: 0.6891 REMARK 3 S TENSOR REMARK 3 S11: -0.4624 S12: 0.5889 S13: 0.5670 REMARK 3 S21: -0.3422 S22: 0.3031 S23: 0.3838 REMARK 3 S31: -0.2774 S32: -0.3002 S33: 0.1808 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 117 THROUGH 152 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.0252 26.5082 31.6184 REMARK 3 T TENSOR REMARK 3 T11: 0.1295 T22: 0.1777 REMARK 3 T33: 0.1560 T12: -0.0187 REMARK 3 T13: 0.0141 T23: 0.0036 REMARK 3 L TENSOR REMARK 3 L11: 7.1299 L22: 3.8869 REMARK 3 L33: 7.1350 L12: 0.6261 REMARK 3 L13: 1.0787 L23: -0.7710 REMARK 3 S TENSOR REMARK 3 S11: -0.1162 S12: -0.1698 S13: 0.0588 REMARK 3 S21: 0.0713 S22: 0.1440 S23: 0.0507 REMARK 3 S31: 0.1184 S32: -0.4924 S33: -0.0306 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6OE6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-MAR-19. REMARK 100 THE DEPOSITION ID IS D_1000240536. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-MAR-19; 07-MAR-19 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N; Y REMARK 200 RADIATION SOURCE : ROTATING ANODE; APS REMARK 200 BEAMLINE : NULL; 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E+ SUPERBRIGHT; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418; 0.97872 REMARK 200 MONOCHROMATOR : NULL; C(111) REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944+; RAYONIX MX REMARK 200 -300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31388 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 40.122 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 4.789 REMARK 200 R MERGE (I) : 0.03800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.2100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.71 REMARK 200 R MERGE FOR SHELL (I) : 0.48500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.910 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHASER, PARROT REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MICROLYTIC MCSG1 SCREEN F8: 3500MM REMARK 280 SODIUM FORMATE: LPINA.19858.A.B2.PS38529 AT 23.59MG/ML: CRYO: REMARK 280 DIRECT: TRAY 306183 F8: PUCK LBO4-3. FOR EXPERIMENTAL PHASING, A REMARK 280 CRYSTAL FROM THE SAME WELL WAS INCUBATED FOR 10SEC IN A SOLUTION REMARK 280 OF 90% RESERVOIR AND 10% 2.5M SODIUM IODIDE IN ETHYLENE GLYCOL REMARK 280 AND VITRIFIED: TRAY: 306143 F8: PUCK: KZX0-14, PH 6.5, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 33.16000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 66.32000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 21 REMARK 465 ALA A 22 REMARK 465 HIS A 23 REMARK 465 HIS A 24 REMARK 465 HIS A 25 REMARK 465 HIS A 26 REMARK 465 HIS A 27 REMARK 465 HIS A 28 REMARK 465 CYS A 29 REMARK 465 PHE A 30 REMARK 465 LYS A 31 REMARK 465 PRO A 32 REMARK 465 LYS A 45 REMARK 465 PHE A 46 REMARK 465 ASN A 47 REMARK 465 ILE A 48 REMARK 465 ILE A 49 REMARK 465 GLU A 50 REMARK 465 LYS A 51 REMARK 465 LYS A 52 REMARK 465 ILE A 53 REMARK 465 ALA A 169 REMARK 465 MET A 170 REMARK 465 LYS A 171 REMARK 465 MET B 21 REMARK 465 ALA B 22 REMARK 465 HIS B 23 REMARK 465 HIS B 24 REMARK 465 HIS B 25 REMARK 465 HIS B 26 REMARK 465 HIS B 27 REMARK 465 HIS B 28 REMARK 465 CYS B 29 REMARK 465 PHE B 30 REMARK 465 LYS B 31 REMARK 465 PRO B 32 REMARK 465 GLU B 44 REMARK 465 LYS B 45 REMARK 465 PHE B 46 REMARK 465 ASN B 47 REMARK 465 ILE B 48 REMARK 465 ILE B 49 REMARK 465 GLU B 50 REMARK 465 LYS B 51 REMARK 465 LYS B 52 REMARK 465 ILE B 53 REMARK 465 THR B 153 REMARK 465 PRO B 154 REMARK 465 TYR B 155 REMARK 465 ILE B 156 REMARK 465 GLU B 157 REMARK 465 ASP B 158 REMARK 465 THR B 159 REMARK 465 SER B 160 REMARK 465 SER B 161 REMARK 465 SER B 162 REMARK 465 ALA B 163 REMARK 465 ASP B 164 REMARK 465 ASP B 165 REMARK 465 ILE B 166 REMARK 465 GLU B 167 REMARK 465 LYS B 168 REMARK 465 ALA B 169 REMARK 465 MET B 170 REMARK 465 LYS B 171 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 44 CG CD OE1 OE2 REMARK 470 GLU A 58 CG CD OE1 OE2 REMARK 470 LYS A 64 CG CD CE NZ REMARK 470 ARG A 82 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 152 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 157 CG CD OE1 OE2 REMARK 470 ASP A 158 CG OD1 OD2 REMARK 470 THR A 159 OG1 CG2 REMARK 470 LYS A 168 CG CD CE NZ REMARK 470 GLU B 58 CG CD OE1 OE2 REMARK 470 LYS B 64 CG CD CE NZ REMARK 470 ARG B 82 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 110 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 152 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O THR B 33 O HOH B 301 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 98 -102.03 -132.11 REMARK 500 THR A 151 70.36 -67.12 REMARK 500 ARG A 152 98.76 -169.37 REMARK 500 THR A 153 126.45 87.60 REMARK 500 GLN B 98 -97.57 -133.31 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 203 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU A 99 O REMARK 620 2 HOH A 317 O 83.0 REMARK 620 3 SER B 121 O 92.6 86.9 REMARK 620 4 HOH B 310 O 112.3 162.3 100.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 201 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 121 O REMARK 620 2 HOH A 307 O 97.7 REMARK 620 3 LEU B 99 O 74.9 115.3 REMARK 620 4 HOH B 321 O 85.4 169.2 75.5 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 200 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: SSGCID-LPINA.19868.A RELATED DB: TARGETTRACK DBREF 6OE6 A 29 171 UNP Q72Q74 Q72Q74_LEPIC 29 171 DBREF 6OE6 B 29 171 UNP Q72Q74 Q72Q74_LEPIC 29 171 SEQADV 6OE6 MET A 21 UNP Q72Q74 INITIATING METHIONINE SEQADV 6OE6 ALA A 22 UNP Q72Q74 EXPRESSION TAG SEQADV 6OE6 HIS A 23 UNP Q72Q74 EXPRESSION TAG SEQADV 6OE6 HIS A 24 UNP Q72Q74 EXPRESSION TAG SEQADV 6OE6 HIS A 25 UNP Q72Q74 EXPRESSION TAG SEQADV 6OE6 HIS A 26 UNP Q72Q74 EXPRESSION TAG SEQADV 6OE6 HIS A 27 UNP Q72Q74 EXPRESSION TAG SEQADV 6OE6 HIS A 28 UNP Q72Q74 EXPRESSION TAG SEQADV 6OE6 MET B 21 UNP Q72Q74 INITIATING METHIONINE SEQADV 6OE6 ALA B 22 UNP Q72Q74 EXPRESSION TAG SEQADV 6OE6 HIS B 23 UNP Q72Q74 EXPRESSION TAG SEQADV 6OE6 HIS B 24 UNP Q72Q74 EXPRESSION TAG SEQADV 6OE6 HIS B 25 UNP Q72Q74 EXPRESSION TAG SEQADV 6OE6 HIS B 26 UNP Q72Q74 EXPRESSION TAG SEQADV 6OE6 HIS B 27 UNP Q72Q74 EXPRESSION TAG SEQADV 6OE6 HIS B 28 UNP Q72Q74 EXPRESSION TAG SEQRES 1 A 151 MET ALA HIS HIS HIS HIS HIS HIS CYS PHE LYS PRO THR SEQRES 2 A 151 GLY GLU PHE GLY TRP VAL LEU LEU ASP GLU GLU LYS PHE SEQRES 3 A 151 ASN ILE ILE GLU LYS LYS ILE MET THR VAL GLY GLU TYR SEQRES 4 A 151 THR ILE THR ARG LYS ASN LEU ILE PHE PRO ASP ASP LYS SEQRES 5 A 151 THR ILE CYS TYR ILE TYR ARG PHE SER ARG SER VAL SER SEQRES 6 A 151 GLU SER ALA GLU THR TYR VAL SER LEU SER LYS PHE GLN SEQRES 7 A 151 LEU GLY TYR ASN GLU MET ASP VAL LEU ARG LYS ARG PRO SEQRES 8 A 151 ASN PRO VAL SER GLN THR ILE GLU GLY SER PHE GLN GLY SEQRES 9 A 151 LEU SER PRO GLY LYS TYR LEU LEU LYS VAL ALA TYR GLU SEQRES 10 A 151 GLY ASP VAL ILE ASP GLU VAL GLU PHE LEU VAL ARG SER SEQRES 11 A 151 THR ARG THR PRO TYR ILE GLU ASP THR SER SER SER ALA SEQRES 12 A 151 ASP ASP ILE GLU LYS ALA MET LYS SEQRES 1 B 151 MET ALA HIS HIS HIS HIS HIS HIS CYS PHE LYS PRO THR SEQRES 2 B 151 GLY GLU PHE GLY TRP VAL LEU LEU ASP GLU GLU LYS PHE SEQRES 3 B 151 ASN ILE ILE GLU LYS LYS ILE MET THR VAL GLY GLU TYR SEQRES 4 B 151 THR ILE THR ARG LYS ASN LEU ILE PHE PRO ASP ASP LYS SEQRES 5 B 151 THR ILE CYS TYR ILE TYR ARG PHE SER ARG SER VAL SER SEQRES 6 B 151 GLU SER ALA GLU THR TYR VAL SER LEU SER LYS PHE GLN SEQRES 7 B 151 LEU GLY TYR ASN GLU MET ASP VAL LEU ARG LYS ARG PRO SEQRES 8 B 151 ASN PRO VAL SER GLN THR ILE GLU GLY SER PHE GLN GLY SEQRES 9 B 151 LEU SER PRO GLY LYS TYR LEU LEU LYS VAL ALA TYR GLU SEQRES 10 B 151 GLY ASP VAL ILE ASP GLU VAL GLU PHE LEU VAL ARG SER SEQRES 11 B 151 THR ARG THR PRO TYR ILE GLU ASP THR SER SER SER ALA SEQRES 12 B 151 ASP ASP ILE GLU LYS ALA MET LYS HET NA A 201 1 HET FMT A 202 3 HET NA A 203 1 HET FMT B 200 3 HETNAM NA SODIUM ION HETNAM FMT FORMIC ACID FORMUL 3 NA 2(NA 1+) FORMUL 4 FMT 2(C H2 O2) FORMUL 7 HOH *164(H2 O) HELIX 1 AA1 THR A 55 TYR A 59 5 5 HELIX 2 AA2 THR B 55 TYR B 59 5 5 SHEET 1 AA1 4 THR A 60 ILE A 61 0 SHEET 2 AA1 4 GLU A 35 LEU A 41 -1 N TRP A 38 O THR A 60 SHEET 3 AA1 4 THR A 73 ARG A 79 -1 O THR A 73 N LEU A 41 SHEET 4 AA1 4 THR A 117 PHE A 122 -1 O ILE A 118 N TYR A 78 SHEET 1 AA2 5 ILE A 67 PRO A 69 0 SHEET 2 AA2 5 ASP A 139 ARG A 149 1 O LEU A 147 N PHE A 68 SHEET 3 AA2 5 GLY A 128 TYR A 136 -1 N LEU A 132 O VAL A 144 SHEET 4 AA2 5 THR A 90 PHE A 97 -1 N TYR A 91 O ALA A 135 SHEET 5 AA2 5 TYR A 101 LYS A 109 -1 O MET A 104 N LEU A 94 SHEET 1 AA3 4 THR B 60 ILE B 61 0 SHEET 2 AA3 4 GLU B 35 LEU B 41 -1 N TRP B 38 O THR B 60 SHEET 3 AA3 4 THR B 73 ARG B 79 -1 O THR B 73 N LEU B 41 SHEET 4 AA3 4 THR B 117 PHE B 122 -1 O ILE B 118 N TYR B 78 SHEET 1 AA4 5 ILE B 67 PRO B 69 0 SHEET 2 AA4 5 ASP B 139 ARG B 149 1 O ARG B 149 N PHE B 68 SHEET 3 AA4 5 GLY B 128 TYR B 136 -1 N LEU B 132 O VAL B 144 SHEET 4 AA4 5 THR B 90 PHE B 97 -1 N PHE B 97 O LYS B 129 SHEET 5 AA4 5 TYR B 101 LYS B 109 -1 O MET B 104 N LEU B 94 LINK O LEU A 99 NA NA A 203 1555 1555 2.51 LINK O SER A 121 NA NA A 201 1555 1555 2.52 LINK NA NA A 201 O HOH A 307 1555 1555 2.11 LINK NA NA A 201 O LEU B 99 2755 1555 2.46 LINK NA NA A 201 O HOH B 321 1555 3774 2.35 LINK NA NA A 203 O HOH A 317 1555 1555 2.41 LINK NA NA A 203 O SER B 121 1555 1555 2.53 LINK NA NA A 203 O HOH B 310 1555 1555 2.12 SITE 1 AC1 5 SER A 121 HOH A 307 LEU B 99 ASN B 102 SITE 2 AC1 5 HOH B 321 SITE 1 AC2 7 TYR A 76 LEU A 107 LYS A 109 GLY A 120 SITE 2 AC2 7 SER A 121 HOH A 307 HOH A 328 SITE 1 AC3 5 LEU A 99 ASN A 102 HOH A 317 SER B 121 SITE 2 AC3 5 HOH B 310 SITE 1 AC4 7 TYR B 76 VAL B 92 LEU B 107 LYS B 109 SITE 2 AC4 7 GLY B 120 SER B 121 HOH B 310 CRYST1 50.630 50.630 99.480 90.00 90.00 120.00 P 31 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019751 0.011403 0.000000 0.00000 SCALE2 0.000000 0.022807 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010052 0.00000