HEADER TOXIN 28-MAR-19 6OFA TITLE WASABI RECEPTOR TOXIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: WASABI RECEPTOR TOXIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: URODACUS MANICATUS; SOURCE 4 ORGANISM_TAXID: 1330407 KEYWDS CYSTEINE-STABILIZED HELICAL HAIRPIN, TRPA1, SCORPION, VENOM, TOXIN EXPDTA SOLUTION NMR NUMMDL 50 AUTHOR J.V.LIN KING,M.J.S.KELLY,D.JULIUS REVDAT 6 16-OCT-24 6OFA 1 REMARK REVDAT 5 14-JUN-23 6OFA 1 REMARK REVDAT 4 18-DEC-19 6OFA 1 REMARK REVDAT 3 18-SEP-19 6OFA 1 JRNL REVDAT 2 11-SEP-19 6OFA 1 JRNL REVDAT 1 28-AUG-19 6OFA 0 JRNL AUTH J.V.LIN KING,J.J.EMRICK,M.J.S.KELLY,V.HERZIG,G.F.KING, JRNL AUTH 2 K.F.MEDZIHRADSZKY,D.JULIUS JRNL TITL A CELL-PENETRATING SCORPION TOXIN ENABLES MODE-SPECIFIC JRNL TITL 2 MODULATION OF TRPA1 AND PAIN. JRNL REF CELL V. 178 1362 2019 JRNL REFN ISSN 1097-4172 JRNL PMID 31447178 JRNL DOI 10.1016/J.CELL.2019.07.014 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : ARIA REMARK 3 AUTHORS : LINGE, O'DONOGHUE AND NILGES REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6OFA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-APR-19. REMARK 100 THE DEPOSITION ID IS D_1000239519. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 4 REMARK 210 IONIC STRENGTH : 0 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 300 UM WASABI RECEPTOR TOXIN, REMARK 210 90% H2O/10% D2O; 300 UM WASABI REMARK 210 RECEPTOR TOXIN, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-1H COSY; 2D 1H-1H TOCSY; REMARK 210 2D 1H-1H NOESY; 2D 1H-13C HSQC REMARK 210 ALIPHATIC; 2D 1H-13C HSQC REMARK 210 AROMATIC REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CCPNMR ANALYSIS, TOPSPIN, PSVS, REMARK 210 ARIA REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 50 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (RES=RESIDUE NAME; REMARK 470 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 470 MODELS 1-50 REMARK 470 RES CSSEQI ATOMS REMARK 470 SER A 33 O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 2 76.40 -161.90 REMARK 500 1 ASN A 16 -76.87 -71.13 REMARK 500 1 LYS A 17 87.29 172.45 REMARK 500 2 SER A 2 68.46 -159.82 REMARK 500 2 ASN A 16 -76.64 -73.86 REMARK 500 2 LYS A 17 85.35 174.91 REMARK 500 2 ARG A 32 83.44 60.13 REMARK 500 3 SER A 2 70.61 -152.56 REMARK 500 3 ASN A 16 -80.56 -80.34 REMARK 500 3 LYS A 17 87.79 170.36 REMARK 500 4 SER A 2 58.03 -152.21 REMARK 500 4 ASN A 16 -75.98 -67.87 REMARK 500 4 LYS A 17 85.03 174.87 REMARK 500 5 SER A 2 83.10 -169.83 REMARK 500 5 ASN A 16 -77.08 -79.33 REMARK 500 5 LYS A 17 84.05 176.46 REMARK 500 6 SER A 2 86.98 -157.48 REMARK 500 6 ASN A 16 -75.17 -68.27 REMARK 500 6 LYS A 17 85.40 174.38 REMARK 500 7 SER A 2 52.26 -161.71 REMARK 500 7 ASN A 16 -77.80 -81.74 REMARK 500 7 LYS A 17 86.94 172.88 REMARK 500 8 SER A 2 68.74 -165.12 REMARK 500 8 ASN A 16 -75.13 -68.69 REMARK 500 8 LYS A 17 86.38 174.44 REMARK 500 8 ARG A 32 74.36 59.21 REMARK 500 9 SER A 2 65.51 -153.38 REMARK 500 9 ASN A 16 -76.40 -70.93 REMARK 500 9 LYS A 17 85.22 175.34 REMARK 500 9 LEU A 30 -65.69 -91.68 REMARK 500 10 SER A 2 61.30 -158.00 REMARK 500 10 ASN A 16 -73.09 -70.08 REMARK 500 10 LYS A 17 84.50 176.69 REMARK 500 11 SER A 2 72.94 -161.37 REMARK 500 11 ASN A 16 -74.69 -65.37 REMARK 500 11 LYS A 17 84.66 175.25 REMARK 500 11 LEU A 30 -63.33 -90.71 REMARK 500 12 SER A 2 73.47 -174.34 REMARK 500 12 ASN A 16 -73.80 -75.33 REMARK 500 12 LYS A 17 83.87 176.25 REMARK 500 12 LEU A 30 -60.53 -91.29 REMARK 500 12 ARG A 32 95.87 62.99 REMARK 500 13 SER A 2 71.27 -166.11 REMARK 500 13 ASN A 16 -77.42 -81.32 REMARK 500 13 LYS A 17 85.77 172.96 REMARK 500 13 LEU A 30 -64.38 -90.55 REMARK 500 14 SER A 2 67.45 -157.55 REMARK 500 14 ASN A 16 -74.31 -69.04 REMARK 500 14 LYS A 17 85.29 175.93 REMARK 500 15 SER A 2 53.52 -162.64 REMARK 500 REMARK 500 THIS ENTRY HAS 172 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 30597 RELATED DB: BMRB REMARK 900 WASABI RECEPTOR TOXIN DBREF 6OFA A 1 33 PDB 6OFA 6OFA 1 33 SEQRES 1 A 33 ALA SER PRO GLN GLN ALA LYS TYR CYS TYR GLU GLN CYS SEQRES 2 A 33 ASN VAL ASN LYS VAL PRO PHE ASP GLN CYS TYR GLN MET SEQRES 3 A 33 CYS SER PRO LEU GLU ARG SER HELIX 1 AA1 SER A 2 LYS A 17 1 16 HELIX 2 AA2 PRO A 19 ARG A 32 1 14 SSBOND 1 CYS A 9 CYS A 27 1555 1555 2.03 SSBOND 2 CYS A 13 CYS A 23 1555 1555 2.03 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1