data_6OGK # _entry.id 6OGK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6OGK pdb_00006ogk 10.2210/pdb6ogk/pdb WWPDB D_1000236100 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6OGK _pdbx_database_status.recvd_initial_deposition_date 2019-04-02 _pdbx_database_status.SG_entry Y _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Lei, M.' 1 ? 'Tempel, W.' 2 ? 'Arrowsmith, C.H.' 3 ? 'Bountra, C.' 4 ? 'Edwards, A.M.' 5 ? 'Min, J.' 6 ? 'Structural Genomics Consortium' 7 ? 'Structural Genomics Consortium (SGC)' 8 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Biochim Biophys Acta Gene Regul Mech' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1876-4320 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 1862 _citation.language ? _citation.page_first 194409 _citation.page_last 194409 _citation.title 'Plasticity at the DNA recognition site of the MeCP2 mCG-binding domain.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.bbagrm.2019.194409 _citation.pdbx_database_id_PubMed 31356990 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lei, M.' 1 ? primary 'Tempel, W.' 2 ? primary 'Chen, S.' 3 ? primary 'Liu, K.' 4 ? primary 'Min, J.' 5 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6OGK _cell.details ? _cell.formula_units_Z ? _cell.length_a 40.470 _cell.length_a_esd ? _cell.length_b 51.976 _cell.length_b_esd ? _cell.length_c 66.304 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6OGK _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Methyl-CpG-binding protein 2' 11269.628 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(*GP*CP*CP*TP*AP*(5CM)P*AP*CP*TP*CP*CP*G)-3') ; 3597.371 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(*CP*GP*GP*AP*GP*TP*GP*TP*AP*GP*GP*C)-3') ; 3743.440 1 ? ? ? ? 4 non-polymer syn 'UNKNOWN ATOM OR ION' ? 17 ? ? ? ? 5 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 6 water nat water 18.015 56 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name MeCp2 # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;ASASPKQRRSIIRDRGPMYDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELIAYFEKVGDTSLDPNDFD FTVTGRGSPSRAAHHHHHH ; ;ASASPKQRRSIIRDRGPMYDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELIAYFEKVGDTSLDPNDFD FTVTGRGSPSRAAHHHHHH ; A ? 2 polydeoxyribonucleotide no yes '(DG)(DC)(DC)(DT)(DA)(5CM)(DA)(DC)(DT)(DC)(DC)(DG)' GCCTACACTCCG D ? 3 polydeoxyribonucleotide no no '(DC)(DG)(DG)(DA)(DG)(DT)(DG)(DT)(DA)(DG)(DG)(DC)' CGGAGTGTAGGC C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 SER n 1 3 ALA n 1 4 SER n 1 5 PRO n 1 6 LYS n 1 7 GLN n 1 8 ARG n 1 9 ARG n 1 10 SER n 1 11 ILE n 1 12 ILE n 1 13 ARG n 1 14 ASP n 1 15 ARG n 1 16 GLY n 1 17 PRO n 1 18 MET n 1 19 TYR n 1 20 ASP n 1 21 ASP n 1 22 PRO n 1 23 THR n 1 24 LEU n 1 25 PRO n 1 26 GLU n 1 27 GLY n 1 28 TRP n 1 29 THR n 1 30 ARG n 1 31 LYS n 1 32 LEU n 1 33 LYS n 1 34 GLN n 1 35 ARG n 1 36 LYS n 1 37 SER n 1 38 GLY n 1 39 ARG n 1 40 SER n 1 41 ALA n 1 42 GLY n 1 43 LYS n 1 44 TYR n 1 45 ASP n 1 46 VAL n 1 47 TYR n 1 48 LEU n 1 49 ILE n 1 50 ASN n 1 51 PRO n 1 52 GLN n 1 53 GLY n 1 54 LYS n 1 55 ALA n 1 56 PHE n 1 57 ARG n 1 58 SER n 1 59 LYS n 1 60 VAL n 1 61 GLU n 1 62 LEU n 1 63 ILE n 1 64 ALA n 1 65 TYR n 1 66 PHE n 1 67 GLU n 1 68 LYS n 1 69 VAL n 1 70 GLY n 1 71 ASP n 1 72 THR n 1 73 SER n 1 74 LEU n 1 75 ASP n 1 76 PRO n 1 77 ASN n 1 78 ASP n 1 79 PHE n 1 80 ASP n 1 81 PHE n 1 82 THR n 1 83 VAL n 1 84 THR n 1 85 GLY n 1 86 ARG n 1 87 GLY n 1 88 SER n 1 89 PRO n 1 90 SER n 1 91 ARG n 1 92 ALA n 1 93 ALA n 1 94 HIS n 1 95 HIS n 1 96 HIS n 1 97 HIS n 1 98 HIS n 1 99 HIS n 2 1 DG n 2 2 DC n 2 3 DC n 2 4 DT n 2 5 DA n 2 6 5CM n 2 7 DA n 2 8 DC n 2 9 DT n 2 10 DC n 2 11 DC n 2 12 DG n 3 1 DC n 3 2 DG n 3 3 DG n 3 4 DA n 3 5 DG n 3 6 DT n 3 7 DG n 3 8 DT n 3 9 DA n 3 10 DG n 3 11 DG n 3 12 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 99 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene MECP2 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)-V2R-RIL' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pNIC-CH _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 12 'synthetic construct' ? 32630 ? 3 1 sample 1 12 'synthetic construct' ? 32630 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP MECP2_HUMAN P51608 ? 1 ;ASASPKQRRSIIRDRGPMYDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELIAYFEKVGDTSLDPNDFD FTVTGRGSPSR ; 77 2 PDB 6OGK 6OGK ? 2 ? 1 3 PDB 6OGK 6OGK ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6OGK A 1 ? 91 ? P51608 77 ? 167 ? 77 167 2 2 6OGK D 1 ? 12 ? 6OGK 1 ? 12 ? 1 12 3 3 6OGK C 1 ? 12 ? 6OGK 1 ? 12 ? 1 12 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6OGK ALA A 92 ? UNP P51608 ? ? 'expression tag' 168 1 1 6OGK ALA A 93 ? UNP P51608 ? ? 'expression tag' 169 2 1 6OGK HIS A 94 ? UNP P51608 ? ? 'expression tag' 170 3 1 6OGK HIS A 95 ? UNP P51608 ? ? 'expression tag' 171 4 1 6OGK HIS A 96 ? UNP P51608 ? ? 'expression tag' 172 5 1 6OGK HIS A 97 ? UNP P51608 ? ? 'expression tag' 173 6 1 6OGK HIS A 98 ? UNP P51608 ? ? 'expression tag' 174 7 1 6OGK HIS A 99 ? UNP P51608 ? ? 'expression tag' 175 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 5CM 'DNA linking' n "5-METHYL-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE" ? 'C10 H16 N3 O7 P' 321.224 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UNX non-polymer . 'UNKNOWN ATOM OR ION' ? ? ? VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6OGK _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.87 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 34.35 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '50% precipitant mix 4, 0.1M buffer system 1, 0.06M divalents (morpheus A4)' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2018-09-22 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97741 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ALS BEAMLINE 5.0.1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97741 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 5.0.1 _diffrn_source.pdbx_synchrotron_site ALS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6OGK _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.600 _reflns.d_resolution_low 40.910 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 18969 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.800 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.100 _reflns.pdbx_Rmerge_I_obs 0.060 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 17.500 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects 0 _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.065 _reflns.pdbx_Rpim_I_all 0.026 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 115783 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 1.000 _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 1.600 1.630 ? ? 3650 ? ? 891 ? 97.300 ? ? ? ? 1.835 ? ? ? ? ? ? ? ? 4.100 ? ? ? 0.700 2.092 0.982 ? 1 1 0.366 ? 8.780 40.910 ? ? 726 ? ? 150 ? 99.500 ? ? ? ? 0.014 ? ? ? ? ? ? ? ? 4.800 ? ? ? 82.500 0.016 0.007 ? 2 1 1.000 ? # _refine.aniso_B[1][1] 0.6700 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][2] -1.7500 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] 1.0800 _refine.B_iso_max 70.810 _refine.B_iso_mean 29.8870 _refine.B_iso_min 17.800 _refine.correlation_coeff_Fo_to_Fc 0.9540 _refine.correlation_coeff_Fo_to_Fc_free 0.9440 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : WITH TLS ADDED' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6OGK _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.6500 _refine.ls_d_res_low 40.9000 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 15648 _refine.ls_number_reflns_R_free 1773 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.9600 _refine.ls_percent_reflns_R_free 10.2000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2289 _refine.ls_R_factor_R_free 0.2552 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2259 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'pdb entry 6c1y' _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.1250 _refine.pdbx_overall_ESU_R_Free 0.1190 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 6.0030 _refine.overall_SU_ML 0.0990 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 1.6500 _refine_hist.d_res_low 40.9000 _refine_hist.number_atoms_solvent 56 _refine_hist.number_atoms_total 1146 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 100 _refine_hist.pdbx_B_iso_mean_ligand 29.06 _refine_hist.pdbx_B_iso_mean_solvent 28.52 _refine_hist.pdbx_number_atoms_protein 585 _refine_hist.pdbx_number_atoms_nucleic_acid 487 _refine_hist.pdbx_number_atoms_ligand 18 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.011 0.012 1159 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.003 0.018 805 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.743 1.445 1678 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.524 2.085 1883 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 6.407 5.000 75 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 29.027 22.188 32 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 13.015 15.000 91 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 24.813 15.000 4 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.077 0.200 150 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.018 0.020 990 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.008 0.020 262 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? 1.036 1.947 303 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 1.037 1.943 302 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 1.649 2.905 377 ? r_mcangle_it ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.6500 _refine_ls_shell.d_res_low 1.6930 _refine_ls_shell.number_reflns_all 1280 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 139 _refine_ls_shell.number_reflns_R_work 1141 _refine_ls_shell.percent_reflns_obs 99.9200 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.3650 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.3390 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6OGK _struct.title 'MeCP2 MBD in complex with DNA' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6OGK _struct_keywords.text 'MBD, Structural Genomics, Structural Genomics Consortium, SGC, DNA BINDING PROTEIN-DNA complex' _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN/DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? I N N 4 ? J N N 4 ? K N N 4 ? L N N 4 ? M N N 4 ? N N N 5 ? O N N 4 ? P N N 4 ? Q N N 4 ? R N N 4 ? S N N 4 ? T N N 4 ? U N N 4 ? V N N 6 ? W N N 6 ? X N N 6 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 58 ? VAL A 69 ? SER A 134 VAL A 145 1 ? 12 HELX_P HELX_P2 AA2 ASP A 75 ? PHE A 79 ? ASP A 151 PHE A 155 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B DA 5 "O3'" ? ? ? 1_555 B 5CM 6 P ? ? D DA 5 D 5CM 6 1_555 ? ? ? ? ? ? ? 1.555 ? ? covale2 covale both ? B 5CM 6 "O3'" ? ? ? 1_555 B DA 7 P ? ? D 5CM 6 D DA 7 1_555 ? ? ? ? ? ? ? 1.670 ? ? metalc1 metalc ? ? A LYS 68 O ? ? ? 1_555 N CA . CA ? ? A LYS 144 A CA 211 4_555 ? ? ? ? ? ? ? 2.233 ? ? metalc2 metalc ? ? A ASP 78 O ? ? ? 1_555 N CA . CA ? ? A ASP 154 A CA 211 1_555 ? ? ? ? ? ? ? 2.379 ? ? metalc3 metalc ? ? A ASP 78 OD1 ? ? ? 1_555 N CA . CA ? ? A ASP 154 A CA 211 1_555 ? ? ? ? ? ? ? 2.289 ? ? metalc4 metalc ? ? N CA . CA ? ? ? 1_555 V HOH . O ? ? A CA 211 A HOH 304 1_555 ? ? ? ? ? ? ? 2.389 ? ? metalc5 metalc ? ? N CA . CA ? ? ? 1_555 V HOH . O ? ? A CA 211 A HOH 309 1_555 ? ? ? ? ? ? ? 2.085 ? ? metalc6 metalc ? ? N CA . CA ? ? ? 1_555 V HOH . O ? ? A CA 211 A HOH 324 1_555 ? ? ? ? ? ? ? 2.584 ? ? metalc7 metalc ? ? N CA . CA ? ? ? 1_555 V HOH . O ? ? A CA 211 A HOH 327 1_555 ? ? ? ? ? ? ? 2.393 ? ? hydrog1 hydrog ? ? B DG 1 N1 ? ? ? 1_555 C DC 12 N3 ? ? D DG 1 C DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DG 1 N2 ? ? ? 1_555 C DC 12 O2 ? ? D DG 1 C DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 1 O6 ? ? ? 1_555 C DC 12 N4 ? ? D DG 1 C DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DC 2 N3 ? ? ? 1_555 C DG 11 N1 ? ? D DC 2 C DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DC 2 N4 ? ? ? 1_555 C DG 11 O6 ? ? D DC 2 C DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DC 2 O2 ? ? ? 1_555 C DG 11 N2 ? ? D DC 2 C DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DC 3 N3 ? ? ? 1_555 C DG 10 N1 ? ? D DC 3 C DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DC 3 N4 ? ? ? 1_555 C DG 10 O6 ? ? D DC 3 C DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DC 3 O2 ? ? ? 1_555 C DG 10 N2 ? ? D DC 3 C DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DT 4 N3 ? ? ? 1_555 C DA 9 N1 ? ? D DT 4 C DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DT 4 O4 ? ? ? 1_555 C DA 9 N6 ? ? D DT 4 C DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DA 5 N1 ? ? ? 1_555 C DT 8 N3 ? ? D DA 5 C DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DA 5 N6 ? ? ? 1_555 C DT 8 O4 ? ? D DA 5 C DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B 5CM 6 N3 ? ? ? 1_555 C DG 7 N1 ? ? D 5CM 6 C DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B 5CM 6 N4 ? ? ? 1_555 C DG 7 O6 ? ? D 5CM 6 C DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B 5CM 6 O2 ? ? ? 1_555 C DG 7 N2 ? ? D 5CM 6 C DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DA 7 N1 ? ? ? 1_555 C DT 6 N3 ? ? D DA 7 C DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DA 7 N6 ? ? ? 1_555 C DT 6 O4 ? ? D DA 7 C DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DC 8 N3 ? ? ? 1_555 C DG 5 N1 ? ? D DC 8 C DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DC 8 N4 ? ? ? 1_555 C DG 5 O6 ? ? D DC 8 C DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DC 8 O2 ? ? ? 1_555 C DG 5 N2 ? ? D DC 8 C DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DT 9 N3 ? ? ? 1_555 C DA 4 N1 ? ? D DT 9 C DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DT 9 O4 ? ? ? 1_555 C DA 4 N6 ? ? D DT 9 C DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DC 10 N3 ? ? ? 1_555 C DG 3 N1 ? ? D DC 10 C DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DC 10 N4 ? ? ? 1_555 C DG 3 O6 ? ? D DC 10 C DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DC 10 O2 ? ? ? 1_555 C DG 3 N2 ? ? D DC 10 C DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DC 11 N3 ? ? ? 1_555 C DG 2 N1 ? ? D DC 11 C DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B DC 11 N4 ? ? ? 1_555 C DG 2 O6 ? ? D DC 11 C DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B DC 11 O2 ? ? ? 1_555 C DG 2 N2 ? ? D DC 11 C DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B DG 12 N1 ? ? ? 1_555 C DC 1 N3 ? ? D DG 12 C DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B DG 12 N2 ? ? ? 1_555 C DC 1 O2 ? ? D DG 12 C DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B DG 12 O6 ? ? ? 1_555 C DC 1 N4 ? ? D DG 12 C DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 THR A 29 ? GLN A 34 ? THR A 105 GLN A 110 AA1 2 TYR A 44 ? ILE A 49 ? TYR A 120 ILE A 125 AA1 3 ALA A 55 ? PHE A 56 ? ALA A 131 PHE A 132 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LYS A 31 ? N LYS A 107 O TYR A 47 ? O TYR A 123 AA1 2 3 N LEU A 48 ? N LEU A 124 O PHE A 56 ? O PHE A 132 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id CA _struct_site.pdbx_auth_seq_id 211 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 6 _struct_site.details 'binding site for residue CA A 211' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 LYS A 68 ? LYS A 144 . ? 4_455 ? 2 AC1 6 ASP A 78 ? ASP A 154 . ? 1_555 ? 3 AC1 6 HOH V . ? HOH A 304 . ? 1_555 ? 4 AC1 6 HOH V . ? HOH A 309 . ? 1_555 ? 5 AC1 6 HOH V . ? HOH A 324 . ? 1_555 ? 6 AC1 6 HOH V . ? HOH A 327 . ? 1_555 ? # _atom_sites.entry_id 6OGK _atom_sites.fract_transf_matrix[1][1] 0.024710 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019240 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015082 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CA N O P S X # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 77 ? ? ? A . n A 1 2 SER 2 78 ? ? ? A . n A 1 3 ALA 3 79 ? ? ? A . n A 1 4 SER 4 80 ? ? ? A . n A 1 5 PRO 5 81 ? ? ? A . n A 1 6 LYS 6 82 ? ? ? A . n A 1 7 GLN 7 83 ? ? ? A . n A 1 8 ARG 8 84 ? ? ? A . n A 1 9 ARG 9 85 ? ? ? A . n A 1 10 SER 10 86 ? ? ? A . n A 1 11 ILE 11 87 ? ? ? A . n A 1 12 ILE 12 88 ? ? ? A . n A 1 13 ARG 13 89 ? ? ? A . n A 1 14 ASP 14 90 90 ASP ASP A . n A 1 15 ARG 15 91 91 ARG ARG A . n A 1 16 GLY 16 92 92 GLY GLY A . n A 1 17 PRO 17 93 93 PRO PRO A . n A 1 18 MET 18 94 94 MET MET A . n A 1 19 TYR 19 95 95 TYR TYR A . n A 1 20 ASP 20 96 96 ASP ASP A . n A 1 21 ASP 21 97 97 ASP ASP A . n A 1 22 PRO 22 98 98 PRO PRO A . n A 1 23 THR 23 99 99 THR THR A . n A 1 24 LEU 24 100 100 LEU LEU A . n A 1 25 PRO 25 101 101 PRO PRO A . n A 1 26 GLU 26 102 102 GLU GLU A . n A 1 27 GLY 27 103 103 GLY GLY A . n A 1 28 TRP 28 104 104 TRP TRP A . n A 1 29 THR 29 105 105 THR THR A . n A 1 30 ARG 30 106 106 ARG ARG A . n A 1 31 LYS 31 107 107 LYS LYS A . n A 1 32 LEU 32 108 108 LEU LEU A . n A 1 33 LYS 33 109 109 LYS LYS A . n A 1 34 GLN 34 110 110 GLN GLN A . n A 1 35 ARG 35 111 111 ARG ARG A . n A 1 36 LYS 36 112 112 LYS LYS A . n A 1 37 SER 37 113 113 SER SER A . n A 1 38 GLY 38 114 114 GLY GLY A . n A 1 39 ARG 39 115 115 ARG ARG A . n A 1 40 SER 40 116 116 SER SER A . n A 1 41 ALA 41 117 117 ALA ALA A . n A 1 42 GLY 42 118 118 GLY GLY A . n A 1 43 LYS 43 119 119 LYS LYS A . n A 1 44 TYR 44 120 120 TYR TYR A . n A 1 45 ASP 45 121 121 ASP ASP A . n A 1 46 VAL 46 122 122 VAL VAL A . n A 1 47 TYR 47 123 123 TYR TYR A . n A 1 48 LEU 48 124 124 LEU LEU A . n A 1 49 ILE 49 125 125 ILE ILE A . n A 1 50 ASN 50 126 126 ASN ASN A . n A 1 51 PRO 51 127 127 PRO PRO A . n A 1 52 GLN 52 128 128 GLN GLN A . n A 1 53 GLY 53 129 129 GLY GLY A . n A 1 54 LYS 54 130 130 LYS LYS A . n A 1 55 ALA 55 131 131 ALA ALA A . n A 1 56 PHE 56 132 132 PHE PHE A . n A 1 57 ARG 57 133 133 ARG ARG A . n A 1 58 SER 58 134 134 SER SER A . n A 1 59 LYS 59 135 135 LYS LYS A . n A 1 60 VAL 60 136 136 VAL VAL A . n A 1 61 GLU 61 137 137 GLU GLU A . n A 1 62 LEU 62 138 138 LEU LEU A . n A 1 63 ILE 63 139 139 ILE ILE A . n A 1 64 ALA 64 140 140 ALA ALA A . n A 1 65 TYR 65 141 141 TYR TYR A . n A 1 66 PHE 66 142 142 PHE PHE A . n A 1 67 GLU 67 143 143 GLU GLU A . n A 1 68 LYS 68 144 144 LYS LYS A . n A 1 69 VAL 69 145 145 VAL VAL A . n A 1 70 GLY 70 146 146 GLY GLY A . n A 1 71 ASP 71 147 147 ASP ASP A . n A 1 72 THR 72 148 148 THR THR A . n A 1 73 SER 73 149 149 SER SER A . n A 1 74 LEU 74 150 150 LEU LEU A . n A 1 75 ASP 75 151 151 ASP ASP A . n A 1 76 PRO 76 152 152 PRO PRO A . n A 1 77 ASN 77 153 153 ASN ASN A . n A 1 78 ASP 78 154 154 ASP ASP A . n A 1 79 PHE 79 155 155 PHE PHE A . n A 1 80 ASP 80 156 156 ASP ASP A . n A 1 81 PHE 81 157 157 PHE PHE A . n A 1 82 THR 82 158 158 THR THR A . n A 1 83 VAL 83 159 159 VAL VAL A . n A 1 84 THR 84 160 160 THR THR A . n A 1 85 GLY 85 161 161 GLY GLY A . n A 1 86 ARG 86 162 162 ARG ARG A . n A 1 87 GLY 87 163 163 GLY GLY A . n A 1 88 SER 88 164 164 SER SER A . n A 1 89 PRO 89 165 165 PRO PRO A . n A 1 90 SER 90 166 ? ? ? A . n A 1 91 ARG 91 167 ? ? ? A . n A 1 92 ALA 92 168 ? ? ? A . n A 1 93 ALA 93 169 ? ? ? A . n A 1 94 HIS 94 170 ? ? ? A . n A 1 95 HIS 95 171 ? ? ? A . n A 1 96 HIS 96 172 ? ? ? A . n A 1 97 HIS 97 173 ? ? ? A . n A 1 98 HIS 98 174 ? ? ? A . n A 1 99 HIS 99 175 ? ? ? A . n B 2 1 DG 1 1 1 DG DG D . n B 2 2 DC 2 2 2 DC DC D . n B 2 3 DC 3 3 3 DC DC D . n B 2 4 DT 4 4 4 DT DT D . n B 2 5 DA 5 5 5 DA DA D . n B 2 6 5CM 6 6 6 5CM 5CM D . n B 2 7 DA 7 7 7 DA DA D . n B 2 8 DC 8 8 8 DC DC D . n B 2 9 DT 9 9 9 DT DT D . n B 2 10 DC 10 10 10 DC DC D . n B 2 11 DC 11 11 11 DC DC D . n B 2 12 DG 12 12 12 DG DG D . n C 3 1 DC 1 1 1 DC DC C . n C 3 2 DG 2 2 2 DG DG C . n C 3 3 DG 3 3 3 DG DG C . n C 3 4 DA 4 4 4 DA DA C . n C 3 5 DG 5 5 5 DG DG C . n C 3 6 DT 6 6 6 DT DT C . n C 3 7 DG 7 7 7 DG DG C . n C 3 8 DT 8 8 8 DT DT C . n C 3 9 DA 9 9 9 DA DA C . n C 3 10 DG 10 10 10 DG DG C . n C 3 11 DG 11 11 11 DG DG C . n C 3 12 DC 12 12 12 DC DC C . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 UNX 1 201 2 UNX UNX A . E 4 UNX 1 202 4 UNX UNX A . F 4 UNX 1 203 5 UNX UNX A . G 4 UNX 1 204 7 UNX UNX A . H 4 UNX 1 205 10 UNX UNX A . I 4 UNX 1 206 12 UNX UNX A . J 4 UNX 1 207 13 UNX UNX A . K 4 UNX 1 208 14 UNX UNX A . L 4 UNX 1 209 15 UNX UNX A . M 4 UNX 1 210 17 UNX UNX A . N 5 CA 1 211 1 CA CA A . O 4 UNX 1 101 8 UNX UNX D . P 4 UNX 1 102 9 UNX UNX D . Q 4 UNX 1 103 16 UNX UNX D . R 4 UNX 1 104 18 UNX UNX D . S 4 UNX 1 105 19 UNX UNX D . T 4 UNX 1 101 3 UNX UNX C . U 4 UNX 1 102 11 UNX UNX C . V 6 HOH 1 301 16 HOH HOH A . V 6 HOH 2 302 20 HOH HOH A . V 6 HOH 3 303 33 HOH HOH A . V 6 HOH 4 304 36 HOH HOH A . V 6 HOH 5 305 25 HOH HOH A . V 6 HOH 6 306 26 HOH HOH A . V 6 HOH 7 307 2 HOH HOH A . V 6 HOH 8 308 57 HOH HOH A . V 6 HOH 9 309 35 HOH HOH A . V 6 HOH 10 310 53 HOH HOH A . V 6 HOH 11 311 1 HOH HOH A . V 6 HOH 12 312 51 HOH HOH A . V 6 HOH 13 313 5 HOH HOH A . V 6 HOH 14 314 6 HOH HOH A . V 6 HOH 15 315 67 HOH HOH A . V 6 HOH 16 316 58 HOH HOH A . V 6 HOH 17 317 22 HOH HOH A . V 6 HOH 18 318 55 HOH HOH A . V 6 HOH 19 319 56 HOH HOH A . V 6 HOH 20 320 21 HOH HOH A . V 6 HOH 21 321 3 HOH HOH A . V 6 HOH 22 322 7 HOH HOH A . V 6 HOH 23 323 4 HOH HOH A . V 6 HOH 24 324 37 HOH HOH A . V 6 HOH 25 325 8 HOH HOH A . V 6 HOH 26 326 49 HOH HOH A . V 6 HOH 27 327 34 HOH HOH A . V 6 HOH 28 328 47 HOH HOH A . V 6 HOH 29 329 60 HOH HOH A . V 6 HOH 30 330 50 HOH HOH A . V 6 HOH 31 331 61 HOH HOH A . V 6 HOH 32 332 52 HOH HOH A . V 6 HOH 33 333 54 HOH HOH A . W 6 HOH 1 201 9 HOH HOH D . W 6 HOH 2 202 40 HOH HOH D . W 6 HOH 3 203 39 HOH HOH D . W 6 HOH 4 204 66 HOH HOH D . W 6 HOH 5 205 44 HOH HOH D . W 6 HOH 6 206 24 HOH HOH D . W 6 HOH 7 207 27 HOH HOH D . W 6 HOH 8 208 64 HOH HOH D . W 6 HOH 9 209 17 HOH HOH D . W 6 HOH 10 210 15 HOH HOH D . W 6 HOH 11 211 41 HOH HOH D . W 6 HOH 12 212 13 HOH HOH D . W 6 HOH 13 213 48 HOH HOH D . W 6 HOH 14 214 45 HOH HOH D . W 6 HOH 15 215 18 HOH HOH D . W 6 HOH 16 216 63 HOH HOH D . X 6 HOH 1 201 42 HOH HOH C . X 6 HOH 2 202 23 HOH HOH C . X 6 HOH 3 203 65 HOH HOH C . X 6 HOH 4 204 59 HOH HOH C . X 6 HOH 5 205 46 HOH HOH C . X 6 HOH 6 206 31 HOH HOH C . X 6 HOH 7 207 38 HOH HOH C . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3540 ? 1 MORE -12 ? 1 'SSA (A^2)' 8280 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A LYS 68 ? A LYS 144 ? 1_555 CA ? N CA . ? A CA 211 ? 4_555 O ? A ASP 78 ? A ASP 154 ? 1_555 16.2 ? 2 O ? A LYS 68 ? A LYS 144 ? 1_555 CA ? N CA . ? A CA 211 ? 4_555 OD1 ? A ASP 78 ? A ASP 154 ? 1_555 16.9 ? 3 O ? A ASP 78 ? A ASP 154 ? 1_555 CA ? N CA . ? A CA 211 ? 4_555 OD1 ? A ASP 78 ? A ASP 154 ? 1_555 6.6 ? 4 O ? A LYS 68 ? A LYS 144 ? 1_555 CA ? N CA . ? A CA 211 ? 4_555 O ? V HOH . ? A HOH 304 ? 1_555 20.4 ? 5 O ? A ASP 78 ? A ASP 154 ? 1_555 CA ? N CA . ? A CA 211 ? 4_555 O ? V HOH . ? A HOH 304 ? 1_555 4.2 ? 6 OD1 ? A ASP 78 ? A ASP 154 ? 1_555 CA ? N CA . ? A CA 211 ? 4_555 O ? V HOH . ? A HOH 304 ? 1_555 7.5 ? 7 O ? A LYS 68 ? A LYS 144 ? 1_555 CA ? N CA . ? A CA 211 ? 4_555 O ? V HOH . ? A HOH 309 ? 1_555 15.7 ? 8 O ? A ASP 78 ? A ASP 154 ? 1_555 CA ? N CA . ? A CA 211 ? 4_555 O ? V HOH . ? A HOH 309 ? 1_555 1.7 ? 9 OD1 ? A ASP 78 ? A ASP 154 ? 1_555 CA ? N CA . ? A CA 211 ? 4_555 O ? V HOH . ? A HOH 309 ? 1_555 8.1 ? 10 O ? V HOH . ? A HOH 304 ? 1_555 CA ? N CA . ? A CA 211 ? 4_555 O ? V HOH . ? A HOH 309 ? 1_555 5.2 ? 11 O ? A LYS 68 ? A LYS 144 ? 1_555 CA ? N CA . ? A CA 211 ? 4_555 O ? V HOH . ? A HOH 324 ? 1_555 22.6 ? 12 O ? A ASP 78 ? A ASP 154 ? 1_555 CA ? N CA . ? A CA 211 ? 4_555 O ? V HOH . ? A HOH 324 ? 1_555 6.7 ? 13 OD1 ? A ASP 78 ? A ASP 154 ? 1_555 CA ? N CA . ? A CA 211 ? 4_555 O ? V HOH . ? A HOH 324 ? 1_555 7.9 ? 14 O ? V HOH . ? A HOH 304 ? 1_555 CA ? N CA . ? A CA 211 ? 4_555 O ? V HOH . ? A HOH 324 ? 1_555 2.9 ? 15 O ? V HOH . ? A HOH 309 ? 1_555 CA ? N CA . ? A CA 211 ? 4_555 O ? V HOH . ? A HOH 324 ? 1_555 8.0 ? 16 O ? A LYS 68 ? A LYS 144 ? 1_555 CA ? N CA . ? A CA 211 ? 4_555 O ? V HOH . ? A HOH 327 ? 1_555 20.7 ? 17 O ? A ASP 78 ? A ASP 154 ? 1_555 CA ? N CA . ? A CA 211 ? 4_555 O ? V HOH . ? A HOH 327 ? 1_555 7.7 ? 18 OD1 ? A ASP 78 ? A ASP 154 ? 1_555 CA ? N CA . ? A CA 211 ? 4_555 O ? V HOH . ? A HOH 327 ? 1_555 3.9 ? 19 O ? V HOH . ? A HOH 304 ? 1_555 CA ? N CA . ? A CA 211 ? 4_555 O ? V HOH . ? A HOH 327 ? 1_555 6.4 ? 20 O ? V HOH . ? A HOH 309 ? 1_555 CA ? N CA . ? A CA 211 ? 4_555 O ? V HOH . ? A HOH 327 ? 1_555 9.3 ? 21 O ? V HOH . ? A HOH 324 ? 1_555 CA ? N CA . ? A CA 211 ? 4_555 O ? V HOH . ? A HOH 327 ? 1_555 5.3 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-05-01 2 'Structure model' 1 1 2019-11-20 3 'Structure model' 1 2 2023-10-11 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' database_2 6 3 'Structure model' pdbx_initial_refinement_model 7 3 'Structure model' pdbx_struct_conn_angle 8 3 'Structure model' struct_conn 9 3 'Structure model' struct_conn_type # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_abbrev' 2 2 'Structure model' '_citation.journal_id_CSD' 3 2 'Structure model' '_citation.journal_id_ISSN' 4 2 'Structure model' '_citation.journal_volume' 5 2 'Structure model' '_citation.page_first' 6 2 'Structure model' '_citation.page_last' 7 2 'Structure model' '_citation.pdbx_database_id_DOI' 8 2 'Structure model' '_citation.pdbx_database_id_PubMed' 9 2 'Structure model' '_citation.title' 10 2 'Structure model' '_citation.year' 11 3 'Structure model' '_database_2.pdbx_DOI' 12 3 'Structure model' '_database_2.pdbx_database_accession' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 16 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 17 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 18 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 19 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_symmetry' 20 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 21 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 22 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 23 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 24 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 25 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 26 3 'Structure model' '_pdbx_struct_conn_angle.value' 27 3 'Structure model' '_struct_conn.conn_type_id' 28 3 'Structure model' '_struct_conn.id' 29 3 'Structure model' '_struct_conn.pdbx_dist_value' 30 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 31 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 32 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 33 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 34 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 35 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 36 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 37 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 38 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 39 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 40 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 41 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 42 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 43 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 44 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 45 3 'Structure model' '_struct_conn.ptnr2_symmetry' 46 3 'Structure model' '_struct_conn_type.id' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined 18.9121 4.7036 6.8900 0.0098 ? 0.0057 ? -0.0048 ? 0.0475 ? -0.0203 ? 0.0124 ? 1.2305 ? -0.1874 ? 0.1671 ? 3.8901 ? -1.4131 ? 3.8538 ? 0.0335 ? 0.1408 ? -0.0986 ? -0.1774 ? 0.0605 ? 0.0330 ? 0.0492 ? 0.0080 ? -0.0939 ? 2 'X-RAY DIFFRACTION' ? refined 19.2156 7.9129 22.1422 0.0264 ? 0.0298 ? 0.0092 ? 0.1730 ? 0.0829 ? 0.0915 ? 3.7879 ? -2.4782 ? -2.0576 ? 2.7477 ? 0.0756 ? 2.6501 ? -0.2685 ? -0.2671 ? -0.0791 ? 0.0821 ? 0.2271 ? -0.0301 ? 0.2030 ? -0.0651 ? 0.0413 ? 3 'X-RAY DIFFRACTION' ? refined 20.1600 9.4688 21.9732 0.0270 ? -0.0356 ? -0.0213 ? 0.0882 ? 0.0186 ? 0.0514 ? 6.6317 ? -0.4082 ? 2.0605 ? 3.4296 ? -0.5483 ? 2.3318 ? -0.1509 ? -0.0369 ? 0.4735 ? 0.1083 ? 0.0891 ? -0.0688 ? -0.0933 ? -0.0830 ? 0.0618 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? A 90 ? ? A 165 ? ? 2 'X-RAY DIFFRACTION' 2 ? ? D 1 ? ? D 12 ? ? 3 'X-RAY DIFFRACTION' 3 ? ? C 1 ? ? C 12 ? ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0238 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? 0.7.2 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.22 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 N1 D DC 11 ? ? C6 D DC 11 ? ? 1.407 1.367 0.040 0.006 N 2 1 C4 D DC 11 ? ? C5 D DC 11 ? ? 1.493 1.425 0.068 0.008 N 3 1 "O3'" C DG 5 ? B P C DT 6 ? ? 1.531 1.607 -0.076 0.012 Y # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id DG _pdbx_validate_planes.auth_asym_id D _pdbx_validate_planes.auth_seq_id 1 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.087 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 91 ? CG ? A ARG 15 CG 2 1 Y 1 A ARG 91 ? CD ? A ARG 15 CD 3 1 Y 1 A ARG 91 ? NE ? A ARG 15 NE 4 1 Y 1 A ARG 91 ? CZ ? A ARG 15 CZ 5 1 Y 1 A ARG 91 ? NH1 ? A ARG 15 NH1 6 1 Y 1 A ARG 91 ? NH2 ? A ARG 15 NH2 7 1 Y 1 A LYS 107 ? CD ? A LYS 31 CD 8 1 Y 1 A LYS 107 ? CE ? A LYS 31 CE 9 1 Y 1 A LYS 107 ? NZ ? A LYS 31 NZ 10 1 Y 1 A ARG 115 ? CG ? A ARG 39 CG 11 1 Y 1 A ARG 115 ? CD ? A ARG 39 CD 12 1 Y 1 A ARG 115 ? NE ? A ARG 39 NE 13 1 Y 1 A ARG 115 ? CZ ? A ARG 39 CZ 14 1 Y 1 A ARG 115 ? NH1 ? A ARG 39 NH1 15 1 Y 1 A ARG 115 ? NH2 ? A ARG 39 NH2 16 1 Y 1 A LYS 119 ? CD ? A LYS 43 CD 17 1 Y 1 A LYS 119 ? CE ? A LYS 43 CE 18 1 Y 1 A LYS 119 ? NZ ? A LYS 43 NZ 19 1 Y 1 A LYS 135 ? CE ? A LYS 59 CE 20 1 Y 1 A LYS 135 ? NZ ? A LYS 59 NZ 21 1 Y 1 A LYS 144 ? NZ ? A LYS 68 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 77 ? A ALA 1 2 1 Y 1 A SER 78 ? A SER 2 3 1 Y 1 A ALA 79 ? A ALA 3 4 1 Y 1 A SER 80 ? A SER 4 5 1 Y 1 A PRO 81 ? A PRO 5 6 1 Y 1 A LYS 82 ? A LYS 6 7 1 Y 1 A GLN 83 ? A GLN 7 8 1 Y 1 A ARG 84 ? A ARG 8 9 1 Y 1 A ARG 85 ? A ARG 9 10 1 Y 1 A SER 86 ? A SER 10 11 1 Y 1 A ILE 87 ? A ILE 11 12 1 Y 1 A ILE 88 ? A ILE 12 13 1 Y 1 A ARG 89 ? A ARG 13 14 1 Y 1 A SER 166 ? A SER 90 15 1 Y 1 A ARG 167 ? A ARG 91 16 1 Y 1 A ALA 168 ? A ALA 92 17 1 Y 1 A ALA 169 ? A ALA 93 18 1 Y 1 A HIS 170 ? A HIS 94 19 1 Y 1 A HIS 171 ? A HIS 95 20 1 Y 1 A HIS 172 ? A HIS 96 21 1 Y 1 A HIS 173 ? A HIS 97 22 1 Y 1 A HIS 174 ? A HIS 98 23 1 Y 1 A HIS 175 ? A HIS 99 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 5CM N1 N N N 1 5CM C2 C N N 2 5CM N3 N N N 3 5CM C4 C N N 4 5CM C5 C N N 5 5CM C5A C N N 6 5CM C6 C N N 7 5CM O2 O N N 8 5CM N4 N N N 9 5CM "C1'" C N R 10 5CM "C2'" C N N 11 5CM "C3'" C N S 12 5CM "C4'" C N R 13 5CM "O4'" O N N 14 5CM "O3'" O N N 15 5CM "C5'" C N N 16 5CM "O5'" O N N 17 5CM P P N N 18 5CM OP1 O N N 19 5CM OP2 O N N 20 5CM OP3 O N N 21 5CM H5A1 H N N 22 5CM H5A2 H N N 23 5CM H5A3 H N N 24 5CM H6 H N N 25 5CM HN41 H N N 26 5CM HN42 H N N 27 5CM "H1'" H N N 28 5CM "H2'" H N N 29 5CM "H2''" H N N 30 5CM "H3'" H N N 31 5CM "H4'" H N N 32 5CM "HO3'" H N N 33 5CM "H5'" H N N 34 5CM "H5''" H N N 35 5CM HOP2 H N N 36 5CM HOP3 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 CA CA CA N N 111 DA OP3 O N N 112 DA P P N N 113 DA OP1 O N N 114 DA OP2 O N N 115 DA "O5'" O N N 116 DA "C5'" C N N 117 DA "C4'" C N R 118 DA "O4'" O N N 119 DA "C3'" C N S 120 DA "O3'" O N N 121 DA "C2'" C N N 122 DA "C1'" C N R 123 DA N9 N Y N 124 DA C8 C Y N 125 DA N7 N Y N 126 DA C5 C Y N 127 DA C6 C Y N 128 DA N6 N N N 129 DA N1 N Y N 130 DA C2 C Y N 131 DA N3 N Y N 132 DA C4 C Y N 133 DA HOP3 H N N 134 DA HOP2 H N N 135 DA "H5'" H N N 136 DA "H5''" H N N 137 DA "H4'" H N N 138 DA "H3'" H N N 139 DA "HO3'" H N N 140 DA "H2'" H N N 141 DA "H2''" H N N 142 DA "H1'" H N N 143 DA H8 H N N 144 DA H61 H N N 145 DA H62 H N N 146 DA H2 H N N 147 DC OP3 O N N 148 DC P P N N 149 DC OP1 O N N 150 DC OP2 O N N 151 DC "O5'" O N N 152 DC "C5'" C N N 153 DC "C4'" C N R 154 DC "O4'" O N N 155 DC "C3'" C N S 156 DC "O3'" O N N 157 DC "C2'" C N N 158 DC "C1'" C N R 159 DC N1 N N N 160 DC C2 C N N 161 DC O2 O N N 162 DC N3 N N N 163 DC C4 C N N 164 DC N4 N N N 165 DC C5 C N N 166 DC C6 C N N 167 DC HOP3 H N N 168 DC HOP2 H N N 169 DC "H5'" H N N 170 DC "H5''" H N N 171 DC "H4'" H N N 172 DC "H3'" H N N 173 DC "HO3'" H N N 174 DC "H2'" H N N 175 DC "H2''" H N N 176 DC "H1'" H N N 177 DC H41 H N N 178 DC H42 H N N 179 DC H5 H N N 180 DC H6 H N N 181 DG OP3 O N N 182 DG P P N N 183 DG OP1 O N N 184 DG OP2 O N N 185 DG "O5'" O N N 186 DG "C5'" C N N 187 DG "C4'" C N R 188 DG "O4'" O N N 189 DG "C3'" C N S 190 DG "O3'" O N N 191 DG "C2'" C N N 192 DG "C1'" C N R 193 DG N9 N Y N 194 DG C8 C Y N 195 DG N7 N Y N 196 DG C5 C Y N 197 DG C6 C N N 198 DG O6 O N N 199 DG N1 N N N 200 DG C2 C N N 201 DG N2 N N N 202 DG N3 N N N 203 DG C4 C Y N 204 DG HOP3 H N N 205 DG HOP2 H N N 206 DG "H5'" H N N 207 DG "H5''" H N N 208 DG "H4'" H N N 209 DG "H3'" H N N 210 DG "HO3'" H N N 211 DG "H2'" H N N 212 DG "H2''" H N N 213 DG "H1'" H N N 214 DG H8 H N N 215 DG H1 H N N 216 DG H21 H N N 217 DG H22 H N N 218 DT OP3 O N N 219 DT P P N N 220 DT OP1 O N N 221 DT OP2 O N N 222 DT "O5'" O N N 223 DT "C5'" C N N 224 DT "C4'" C N R 225 DT "O4'" O N N 226 DT "C3'" C N S 227 DT "O3'" O N N 228 DT "C2'" C N N 229 DT "C1'" C N R 230 DT N1 N N N 231 DT C2 C N N 232 DT O2 O N N 233 DT N3 N N N 234 DT C4 C N N 235 DT O4 O N N 236 DT C5 C N N 237 DT C7 C N N 238 DT C6 C N N 239 DT HOP3 H N N 240 DT HOP2 H N N 241 DT "H5'" H N N 242 DT "H5''" H N N 243 DT "H4'" H N N 244 DT "H3'" H N N 245 DT "HO3'" H N N 246 DT "H2'" H N N 247 DT "H2''" H N N 248 DT "H1'" H N N 249 DT H3 H N N 250 DT H71 H N N 251 DT H72 H N N 252 DT H73 H N N 253 DT H6 H N N 254 GLN N N N N 255 GLN CA C N S 256 GLN C C N N 257 GLN O O N N 258 GLN CB C N N 259 GLN CG C N N 260 GLN CD C N N 261 GLN OE1 O N N 262 GLN NE2 N N N 263 GLN OXT O N N 264 GLN H H N N 265 GLN H2 H N N 266 GLN HA H N N 267 GLN HB2 H N N 268 GLN HB3 H N N 269 GLN HG2 H N N 270 GLN HG3 H N N 271 GLN HE21 H N N 272 GLN HE22 H N N 273 GLN HXT H N N 274 GLU N N N N 275 GLU CA C N S 276 GLU C C N N 277 GLU O O N N 278 GLU CB C N N 279 GLU CG C N N 280 GLU CD C N N 281 GLU OE1 O N N 282 GLU OE2 O N N 283 GLU OXT O N N 284 GLU H H N N 285 GLU H2 H N N 286 GLU HA H N N 287 GLU HB2 H N N 288 GLU HB3 H N N 289 GLU HG2 H N N 290 GLU HG3 H N N 291 GLU HE2 H N N 292 GLU HXT H N N 293 GLY N N N N 294 GLY CA C N N 295 GLY C C N N 296 GLY O O N N 297 GLY OXT O N N 298 GLY H H N N 299 GLY H2 H N N 300 GLY HA2 H N N 301 GLY HA3 H N N 302 GLY HXT H N N 303 HIS N N N N 304 HIS CA C N S 305 HIS C C N N 306 HIS O O N N 307 HIS CB C N N 308 HIS CG C Y N 309 HIS ND1 N Y N 310 HIS CD2 C Y N 311 HIS CE1 C Y N 312 HIS NE2 N Y N 313 HIS OXT O N N 314 HIS H H N N 315 HIS H2 H N N 316 HIS HA H N N 317 HIS HB2 H N N 318 HIS HB3 H N N 319 HIS HD1 H N N 320 HIS HD2 H N N 321 HIS HE1 H N N 322 HIS HE2 H N N 323 HIS HXT H N N 324 HOH O O N N 325 HOH H1 H N N 326 HOH H2 H N N 327 ILE N N N N 328 ILE CA C N S 329 ILE C C N N 330 ILE O O N N 331 ILE CB C N S 332 ILE CG1 C N N 333 ILE CG2 C N N 334 ILE CD1 C N N 335 ILE OXT O N N 336 ILE H H N N 337 ILE H2 H N N 338 ILE HA H N N 339 ILE HB H N N 340 ILE HG12 H N N 341 ILE HG13 H N N 342 ILE HG21 H N N 343 ILE HG22 H N N 344 ILE HG23 H N N 345 ILE HD11 H N N 346 ILE HD12 H N N 347 ILE HD13 H N N 348 ILE HXT H N N 349 LEU N N N N 350 LEU CA C N S 351 LEU C C N N 352 LEU O O N N 353 LEU CB C N N 354 LEU CG C N N 355 LEU CD1 C N N 356 LEU CD2 C N N 357 LEU OXT O N N 358 LEU H H N N 359 LEU H2 H N N 360 LEU HA H N N 361 LEU HB2 H N N 362 LEU HB3 H N N 363 LEU HG H N N 364 LEU HD11 H N N 365 LEU HD12 H N N 366 LEU HD13 H N N 367 LEU HD21 H N N 368 LEU HD22 H N N 369 LEU HD23 H N N 370 LEU HXT H N N 371 LYS N N N N 372 LYS CA C N S 373 LYS C C N N 374 LYS O O N N 375 LYS CB C N N 376 LYS CG C N N 377 LYS CD C N N 378 LYS CE C N N 379 LYS NZ N N N 380 LYS OXT O N N 381 LYS H H N N 382 LYS H2 H N N 383 LYS HA H N N 384 LYS HB2 H N N 385 LYS HB3 H N N 386 LYS HG2 H N N 387 LYS HG3 H N N 388 LYS HD2 H N N 389 LYS HD3 H N N 390 LYS HE2 H N N 391 LYS HE3 H N N 392 LYS HZ1 H N N 393 LYS HZ2 H N N 394 LYS HZ3 H N N 395 LYS HXT H N N 396 MET N N N N 397 MET CA C N S 398 MET C C N N 399 MET O O N N 400 MET CB C N N 401 MET CG C N N 402 MET SD S N N 403 MET CE C N N 404 MET OXT O N N 405 MET H H N N 406 MET H2 H N N 407 MET HA H N N 408 MET HB2 H N N 409 MET HB3 H N N 410 MET HG2 H N N 411 MET HG3 H N N 412 MET HE1 H N N 413 MET HE2 H N N 414 MET HE3 H N N 415 MET HXT H N N 416 PHE N N N N 417 PHE CA C N S 418 PHE C C N N 419 PHE O O N N 420 PHE CB C N N 421 PHE CG C Y N 422 PHE CD1 C Y N 423 PHE CD2 C Y N 424 PHE CE1 C Y N 425 PHE CE2 C Y N 426 PHE CZ C Y N 427 PHE OXT O N N 428 PHE H H N N 429 PHE H2 H N N 430 PHE HA H N N 431 PHE HB2 H N N 432 PHE HB3 H N N 433 PHE HD1 H N N 434 PHE HD2 H N N 435 PHE HE1 H N N 436 PHE HE2 H N N 437 PHE HZ H N N 438 PHE HXT H N N 439 PRO N N N N 440 PRO CA C N S 441 PRO C C N N 442 PRO O O N N 443 PRO CB C N N 444 PRO CG C N N 445 PRO CD C N N 446 PRO OXT O N N 447 PRO H H N N 448 PRO HA H N N 449 PRO HB2 H N N 450 PRO HB3 H N N 451 PRO HG2 H N N 452 PRO HG3 H N N 453 PRO HD2 H N N 454 PRO HD3 H N N 455 PRO HXT H N N 456 SER N N N N 457 SER CA C N S 458 SER C C N N 459 SER O O N N 460 SER CB C N N 461 SER OG O N N 462 SER OXT O N N 463 SER H H N N 464 SER H2 H N N 465 SER HA H N N 466 SER HB2 H N N 467 SER HB3 H N N 468 SER HG H N N 469 SER HXT H N N 470 THR N N N N 471 THR CA C N S 472 THR C C N N 473 THR O O N N 474 THR CB C N R 475 THR OG1 O N N 476 THR CG2 C N N 477 THR OXT O N N 478 THR H H N N 479 THR H2 H N N 480 THR HA H N N 481 THR HB H N N 482 THR HG1 H N N 483 THR HG21 H N N 484 THR HG22 H N N 485 THR HG23 H N N 486 THR HXT H N N 487 TRP N N N N 488 TRP CA C N S 489 TRP C C N N 490 TRP O O N N 491 TRP CB C N N 492 TRP CG C Y N 493 TRP CD1 C Y N 494 TRP CD2 C Y N 495 TRP NE1 N Y N 496 TRP CE2 C Y N 497 TRP CE3 C Y N 498 TRP CZ2 C Y N 499 TRP CZ3 C Y N 500 TRP CH2 C Y N 501 TRP OXT O N N 502 TRP H H N N 503 TRP H2 H N N 504 TRP HA H N N 505 TRP HB2 H N N 506 TRP HB3 H N N 507 TRP HD1 H N N 508 TRP HE1 H N N 509 TRP HE3 H N N 510 TRP HZ2 H N N 511 TRP HZ3 H N N 512 TRP HH2 H N N 513 TRP HXT H N N 514 TYR N N N N 515 TYR CA C N S 516 TYR C C N N 517 TYR O O N N 518 TYR CB C N N 519 TYR CG C Y N 520 TYR CD1 C Y N 521 TYR CD2 C Y N 522 TYR CE1 C Y N 523 TYR CE2 C Y N 524 TYR CZ C Y N 525 TYR OH O N N 526 TYR OXT O N N 527 TYR H H N N 528 TYR H2 H N N 529 TYR HA H N N 530 TYR HB2 H N N 531 TYR HB3 H N N 532 TYR HD1 H N N 533 TYR HD2 H N N 534 TYR HE1 H N N 535 TYR HE2 H N N 536 TYR HH H N N 537 TYR HXT H N N 538 VAL N N N N 539 VAL CA C N S 540 VAL C C N N 541 VAL O O N N 542 VAL CB C N N 543 VAL CG1 C N N 544 VAL CG2 C N N 545 VAL OXT O N N 546 VAL H H N N 547 VAL H2 H N N 548 VAL HA H N N 549 VAL HB H N N 550 VAL HG11 H N N 551 VAL HG12 H N N 552 VAL HG13 H N N 553 VAL HG21 H N N 554 VAL HG22 H N N 555 VAL HG23 H N N 556 VAL HXT H N N 557 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5CM N1 C2 sing N N 1 5CM N1 C6 sing N N 2 5CM N1 "C1'" sing N N 3 5CM C2 N3 sing N N 4 5CM C2 O2 doub N N 5 5CM N3 C4 doub N N 6 5CM C4 C5 sing N N 7 5CM C4 N4 sing N N 8 5CM C5 C5A sing N N 9 5CM C5 C6 doub N N 10 5CM C5A H5A1 sing N N 11 5CM C5A H5A2 sing N N 12 5CM C5A H5A3 sing N N 13 5CM C6 H6 sing N N 14 5CM N4 HN41 sing N N 15 5CM N4 HN42 sing N N 16 5CM "C1'" "C2'" sing N N 17 5CM "C1'" "O4'" sing N N 18 5CM "C1'" "H1'" sing N N 19 5CM "C2'" "C3'" sing N N 20 5CM "C2'" "H2'" sing N N 21 5CM "C2'" "H2''" sing N N 22 5CM "C3'" "C4'" sing N N 23 5CM "C3'" "O3'" sing N N 24 5CM "C3'" "H3'" sing N N 25 5CM "C4'" "O4'" sing N N 26 5CM "C4'" "C5'" sing N N 27 5CM "C4'" "H4'" sing N N 28 5CM "O3'" "HO3'" sing N N 29 5CM "C5'" "O5'" sing N N 30 5CM "C5'" "H5'" sing N N 31 5CM "C5'" "H5''" sing N N 32 5CM "O5'" P sing N N 33 5CM P OP1 doub N N 34 5CM P OP2 sing N N 35 5CM P OP3 sing N N 36 5CM OP2 HOP2 sing N N 37 5CM OP3 HOP3 sing N N 38 ALA N CA sing N N 39 ALA N H sing N N 40 ALA N H2 sing N N 41 ALA CA C sing N N 42 ALA CA CB sing N N 43 ALA CA HA sing N N 44 ALA C O doub N N 45 ALA C OXT sing N N 46 ALA CB HB1 sing N N 47 ALA CB HB2 sing N N 48 ALA CB HB3 sing N N 49 ALA OXT HXT sing N N 50 ARG N CA sing N N 51 ARG N H sing N N 52 ARG N H2 sing N N 53 ARG CA C sing N N 54 ARG CA CB sing N N 55 ARG CA HA sing N N 56 ARG C O doub N N 57 ARG C OXT sing N N 58 ARG CB CG sing N N 59 ARG CB HB2 sing N N 60 ARG CB HB3 sing N N 61 ARG CG CD sing N N 62 ARG CG HG2 sing N N 63 ARG CG HG3 sing N N 64 ARG CD NE sing N N 65 ARG CD HD2 sing N N 66 ARG CD HD3 sing N N 67 ARG NE CZ sing N N 68 ARG NE HE sing N N 69 ARG CZ NH1 sing N N 70 ARG CZ NH2 doub N N 71 ARG NH1 HH11 sing N N 72 ARG NH1 HH12 sing N N 73 ARG NH2 HH21 sing N N 74 ARG NH2 HH22 sing N N 75 ARG OXT HXT sing N N 76 ASN N CA sing N N 77 ASN N H sing N N 78 ASN N H2 sing N N 79 ASN CA C sing N N 80 ASN CA CB sing N N 81 ASN CA HA sing N N 82 ASN C O doub N N 83 ASN C OXT sing N N 84 ASN CB CG sing N N 85 ASN CB HB2 sing N N 86 ASN CB HB3 sing N N 87 ASN CG OD1 doub N N 88 ASN CG ND2 sing N N 89 ASN ND2 HD21 sing N N 90 ASN ND2 HD22 sing N N 91 ASN OXT HXT sing N N 92 ASP N CA sing N N 93 ASP N H sing N N 94 ASP N H2 sing N N 95 ASP CA C sing N N 96 ASP CA CB sing N N 97 ASP CA HA sing N N 98 ASP C O doub N N 99 ASP C OXT sing N N 100 ASP CB CG sing N N 101 ASP CB HB2 sing N N 102 ASP CB HB3 sing N N 103 ASP CG OD1 doub N N 104 ASP CG OD2 sing N N 105 ASP OD2 HD2 sing N N 106 ASP OXT HXT sing N N 107 DA OP3 P sing N N 108 DA OP3 HOP3 sing N N 109 DA P OP1 doub N N 110 DA P OP2 sing N N 111 DA P "O5'" sing N N 112 DA OP2 HOP2 sing N N 113 DA "O5'" "C5'" sing N N 114 DA "C5'" "C4'" sing N N 115 DA "C5'" "H5'" sing N N 116 DA "C5'" "H5''" sing N N 117 DA "C4'" "O4'" sing N N 118 DA "C4'" "C3'" sing N N 119 DA "C4'" "H4'" sing N N 120 DA "O4'" "C1'" sing N N 121 DA "C3'" "O3'" sing N N 122 DA "C3'" "C2'" sing N N 123 DA "C3'" "H3'" sing N N 124 DA "O3'" "HO3'" sing N N 125 DA "C2'" "C1'" sing N N 126 DA "C2'" "H2'" sing N N 127 DA "C2'" "H2''" sing N N 128 DA "C1'" N9 sing N N 129 DA "C1'" "H1'" sing N N 130 DA N9 C8 sing Y N 131 DA N9 C4 sing Y N 132 DA C8 N7 doub Y N 133 DA C8 H8 sing N N 134 DA N7 C5 sing Y N 135 DA C5 C6 sing Y N 136 DA C5 C4 doub Y N 137 DA C6 N6 sing N N 138 DA C6 N1 doub Y N 139 DA N6 H61 sing N N 140 DA N6 H62 sing N N 141 DA N1 C2 sing Y N 142 DA C2 N3 doub Y N 143 DA C2 H2 sing N N 144 DA N3 C4 sing Y N 145 DC OP3 P sing N N 146 DC OP3 HOP3 sing N N 147 DC P OP1 doub N N 148 DC P OP2 sing N N 149 DC P "O5'" sing N N 150 DC OP2 HOP2 sing N N 151 DC "O5'" "C5'" sing N N 152 DC "C5'" "C4'" sing N N 153 DC "C5'" "H5'" sing N N 154 DC "C5'" "H5''" sing N N 155 DC "C4'" "O4'" sing N N 156 DC "C4'" "C3'" sing N N 157 DC "C4'" "H4'" sing N N 158 DC "O4'" "C1'" sing N N 159 DC "C3'" "O3'" sing N N 160 DC "C3'" "C2'" sing N N 161 DC "C3'" "H3'" sing N N 162 DC "O3'" "HO3'" sing N N 163 DC "C2'" "C1'" sing N N 164 DC "C2'" "H2'" sing N N 165 DC "C2'" "H2''" sing N N 166 DC "C1'" N1 sing N N 167 DC "C1'" "H1'" sing N N 168 DC N1 C2 sing N N 169 DC N1 C6 sing N N 170 DC C2 O2 doub N N 171 DC C2 N3 sing N N 172 DC N3 C4 doub N N 173 DC C4 N4 sing N N 174 DC C4 C5 sing N N 175 DC N4 H41 sing N N 176 DC N4 H42 sing N N 177 DC C5 C6 doub N N 178 DC C5 H5 sing N N 179 DC C6 H6 sing N N 180 DG OP3 P sing N N 181 DG OP3 HOP3 sing N N 182 DG P OP1 doub N N 183 DG P OP2 sing N N 184 DG P "O5'" sing N N 185 DG OP2 HOP2 sing N N 186 DG "O5'" "C5'" sing N N 187 DG "C5'" "C4'" sing N N 188 DG "C5'" "H5'" sing N N 189 DG "C5'" "H5''" sing N N 190 DG "C4'" "O4'" sing N N 191 DG "C4'" "C3'" sing N N 192 DG "C4'" "H4'" sing N N 193 DG "O4'" "C1'" sing N N 194 DG "C3'" "O3'" sing N N 195 DG "C3'" "C2'" sing N N 196 DG "C3'" "H3'" sing N N 197 DG "O3'" "HO3'" sing N N 198 DG "C2'" "C1'" sing N N 199 DG "C2'" "H2'" sing N N 200 DG "C2'" "H2''" sing N N 201 DG "C1'" N9 sing N N 202 DG "C1'" "H1'" sing N N 203 DG N9 C8 sing Y N 204 DG N9 C4 sing Y N 205 DG C8 N7 doub Y N 206 DG C8 H8 sing N N 207 DG N7 C5 sing Y N 208 DG C5 C6 sing N N 209 DG C5 C4 doub Y N 210 DG C6 O6 doub N N 211 DG C6 N1 sing N N 212 DG N1 C2 sing N N 213 DG N1 H1 sing N N 214 DG C2 N2 sing N N 215 DG C2 N3 doub N N 216 DG N2 H21 sing N N 217 DG N2 H22 sing N N 218 DG N3 C4 sing N N 219 DT OP3 P sing N N 220 DT OP3 HOP3 sing N N 221 DT P OP1 doub N N 222 DT P OP2 sing N N 223 DT P "O5'" sing N N 224 DT OP2 HOP2 sing N N 225 DT "O5'" "C5'" sing N N 226 DT "C5'" "C4'" sing N N 227 DT "C5'" "H5'" sing N N 228 DT "C5'" "H5''" sing N N 229 DT "C4'" "O4'" sing N N 230 DT "C4'" "C3'" sing N N 231 DT "C4'" "H4'" sing N N 232 DT "O4'" "C1'" sing N N 233 DT "C3'" "O3'" sing N N 234 DT "C3'" "C2'" sing N N 235 DT "C3'" "H3'" sing N N 236 DT "O3'" "HO3'" sing N N 237 DT "C2'" "C1'" sing N N 238 DT "C2'" "H2'" sing N N 239 DT "C2'" "H2''" sing N N 240 DT "C1'" N1 sing N N 241 DT "C1'" "H1'" sing N N 242 DT N1 C2 sing N N 243 DT N1 C6 sing N N 244 DT C2 O2 doub N N 245 DT C2 N3 sing N N 246 DT N3 C4 sing N N 247 DT N3 H3 sing N N 248 DT C4 O4 doub N N 249 DT C4 C5 sing N N 250 DT C5 C7 sing N N 251 DT C5 C6 doub N N 252 DT C7 H71 sing N N 253 DT C7 H72 sing N N 254 DT C7 H73 sing N N 255 DT C6 H6 sing N N 256 GLN N CA sing N N 257 GLN N H sing N N 258 GLN N H2 sing N N 259 GLN CA C sing N N 260 GLN CA CB sing N N 261 GLN CA HA sing N N 262 GLN C O doub N N 263 GLN C OXT sing N N 264 GLN CB CG sing N N 265 GLN CB HB2 sing N N 266 GLN CB HB3 sing N N 267 GLN CG CD sing N N 268 GLN CG HG2 sing N N 269 GLN CG HG3 sing N N 270 GLN CD OE1 doub N N 271 GLN CD NE2 sing N N 272 GLN NE2 HE21 sing N N 273 GLN NE2 HE22 sing N N 274 GLN OXT HXT sing N N 275 GLU N CA sing N N 276 GLU N H sing N N 277 GLU N H2 sing N N 278 GLU CA C sing N N 279 GLU CA CB sing N N 280 GLU CA HA sing N N 281 GLU C O doub N N 282 GLU C OXT sing N N 283 GLU CB CG sing N N 284 GLU CB HB2 sing N N 285 GLU CB HB3 sing N N 286 GLU CG CD sing N N 287 GLU CG HG2 sing N N 288 GLU CG HG3 sing N N 289 GLU CD OE1 doub N N 290 GLU CD OE2 sing N N 291 GLU OE2 HE2 sing N N 292 GLU OXT HXT sing N N 293 GLY N CA sing N N 294 GLY N H sing N N 295 GLY N H2 sing N N 296 GLY CA C sing N N 297 GLY CA HA2 sing N N 298 GLY CA HA3 sing N N 299 GLY C O doub N N 300 GLY C OXT sing N N 301 GLY OXT HXT sing N N 302 HIS N CA sing N N 303 HIS N H sing N N 304 HIS N H2 sing N N 305 HIS CA C sing N N 306 HIS CA CB sing N N 307 HIS CA HA sing N N 308 HIS C O doub N N 309 HIS C OXT sing N N 310 HIS CB CG sing N N 311 HIS CB HB2 sing N N 312 HIS CB HB3 sing N N 313 HIS CG ND1 sing Y N 314 HIS CG CD2 doub Y N 315 HIS ND1 CE1 doub Y N 316 HIS ND1 HD1 sing N N 317 HIS CD2 NE2 sing Y N 318 HIS CD2 HD2 sing N N 319 HIS CE1 NE2 sing Y N 320 HIS CE1 HE1 sing N N 321 HIS NE2 HE2 sing N N 322 HIS OXT HXT sing N N 323 HOH O H1 sing N N 324 HOH O H2 sing N N 325 ILE N CA sing N N 326 ILE N H sing N N 327 ILE N H2 sing N N 328 ILE CA C sing N N 329 ILE CA CB sing N N 330 ILE CA HA sing N N 331 ILE C O doub N N 332 ILE C OXT sing N N 333 ILE CB CG1 sing N N 334 ILE CB CG2 sing N N 335 ILE CB HB sing N N 336 ILE CG1 CD1 sing N N 337 ILE CG1 HG12 sing N N 338 ILE CG1 HG13 sing N N 339 ILE CG2 HG21 sing N N 340 ILE CG2 HG22 sing N N 341 ILE CG2 HG23 sing N N 342 ILE CD1 HD11 sing N N 343 ILE CD1 HD12 sing N N 344 ILE CD1 HD13 sing N N 345 ILE OXT HXT sing N N 346 LEU N CA sing N N 347 LEU N H sing N N 348 LEU N H2 sing N N 349 LEU CA C sing N N 350 LEU CA CB sing N N 351 LEU CA HA sing N N 352 LEU C O doub N N 353 LEU C OXT sing N N 354 LEU CB CG sing N N 355 LEU CB HB2 sing N N 356 LEU CB HB3 sing N N 357 LEU CG CD1 sing N N 358 LEU CG CD2 sing N N 359 LEU CG HG sing N N 360 LEU CD1 HD11 sing N N 361 LEU CD1 HD12 sing N N 362 LEU CD1 HD13 sing N N 363 LEU CD2 HD21 sing N N 364 LEU CD2 HD22 sing N N 365 LEU CD2 HD23 sing N N 366 LEU OXT HXT sing N N 367 LYS N CA sing N N 368 LYS N H sing N N 369 LYS N H2 sing N N 370 LYS CA C sing N N 371 LYS CA CB sing N N 372 LYS CA HA sing N N 373 LYS C O doub N N 374 LYS C OXT sing N N 375 LYS CB CG sing N N 376 LYS CB HB2 sing N N 377 LYS CB HB3 sing N N 378 LYS CG CD sing N N 379 LYS CG HG2 sing N N 380 LYS CG HG3 sing N N 381 LYS CD CE sing N N 382 LYS CD HD2 sing N N 383 LYS CD HD3 sing N N 384 LYS CE NZ sing N N 385 LYS CE HE2 sing N N 386 LYS CE HE3 sing N N 387 LYS NZ HZ1 sing N N 388 LYS NZ HZ2 sing N N 389 LYS NZ HZ3 sing N N 390 LYS OXT HXT sing N N 391 MET N CA sing N N 392 MET N H sing N N 393 MET N H2 sing N N 394 MET CA C sing N N 395 MET CA CB sing N N 396 MET CA HA sing N N 397 MET C O doub N N 398 MET C OXT sing N N 399 MET CB CG sing N N 400 MET CB HB2 sing N N 401 MET CB HB3 sing N N 402 MET CG SD sing N N 403 MET CG HG2 sing N N 404 MET CG HG3 sing N N 405 MET SD CE sing N N 406 MET CE HE1 sing N N 407 MET CE HE2 sing N N 408 MET CE HE3 sing N N 409 MET OXT HXT sing N N 410 PHE N CA sing N N 411 PHE N H sing N N 412 PHE N H2 sing N N 413 PHE CA C sing N N 414 PHE CA CB sing N N 415 PHE CA HA sing N N 416 PHE C O doub N N 417 PHE C OXT sing N N 418 PHE CB CG sing N N 419 PHE CB HB2 sing N N 420 PHE CB HB3 sing N N 421 PHE CG CD1 doub Y N 422 PHE CG CD2 sing Y N 423 PHE CD1 CE1 sing Y N 424 PHE CD1 HD1 sing N N 425 PHE CD2 CE2 doub Y N 426 PHE CD2 HD2 sing N N 427 PHE CE1 CZ doub Y N 428 PHE CE1 HE1 sing N N 429 PHE CE2 CZ sing Y N 430 PHE CE2 HE2 sing N N 431 PHE CZ HZ sing N N 432 PHE OXT HXT sing N N 433 PRO N CA sing N N 434 PRO N CD sing N N 435 PRO N H sing N N 436 PRO CA C sing N N 437 PRO CA CB sing N N 438 PRO CA HA sing N N 439 PRO C O doub N N 440 PRO C OXT sing N N 441 PRO CB CG sing N N 442 PRO CB HB2 sing N N 443 PRO CB HB3 sing N N 444 PRO CG CD sing N N 445 PRO CG HG2 sing N N 446 PRO CG HG3 sing N N 447 PRO CD HD2 sing N N 448 PRO CD HD3 sing N N 449 PRO OXT HXT sing N N 450 SER N CA sing N N 451 SER N H sing N N 452 SER N H2 sing N N 453 SER CA C sing N N 454 SER CA CB sing N N 455 SER CA HA sing N N 456 SER C O doub N N 457 SER C OXT sing N N 458 SER CB OG sing N N 459 SER CB HB2 sing N N 460 SER CB HB3 sing N N 461 SER OG HG sing N N 462 SER OXT HXT sing N N 463 THR N CA sing N N 464 THR N H sing N N 465 THR N H2 sing N N 466 THR CA C sing N N 467 THR CA CB sing N N 468 THR CA HA sing N N 469 THR C O doub N N 470 THR C OXT sing N N 471 THR CB OG1 sing N N 472 THR CB CG2 sing N N 473 THR CB HB sing N N 474 THR OG1 HG1 sing N N 475 THR CG2 HG21 sing N N 476 THR CG2 HG22 sing N N 477 THR CG2 HG23 sing N N 478 THR OXT HXT sing N N 479 TRP N CA sing N N 480 TRP N H sing N N 481 TRP N H2 sing N N 482 TRP CA C sing N N 483 TRP CA CB sing N N 484 TRP CA HA sing N N 485 TRP C O doub N N 486 TRP C OXT sing N N 487 TRP CB CG sing N N 488 TRP CB HB2 sing N N 489 TRP CB HB3 sing N N 490 TRP CG CD1 doub Y N 491 TRP CG CD2 sing Y N 492 TRP CD1 NE1 sing Y N 493 TRP CD1 HD1 sing N N 494 TRP CD2 CE2 doub Y N 495 TRP CD2 CE3 sing Y N 496 TRP NE1 CE2 sing Y N 497 TRP NE1 HE1 sing N N 498 TRP CE2 CZ2 sing Y N 499 TRP CE3 CZ3 doub Y N 500 TRP CE3 HE3 sing N N 501 TRP CZ2 CH2 doub Y N 502 TRP CZ2 HZ2 sing N N 503 TRP CZ3 CH2 sing Y N 504 TRP CZ3 HZ3 sing N N 505 TRP CH2 HH2 sing N N 506 TRP OXT HXT sing N N 507 TYR N CA sing N N 508 TYR N H sing N N 509 TYR N H2 sing N N 510 TYR CA C sing N N 511 TYR CA CB sing N N 512 TYR CA HA sing N N 513 TYR C O doub N N 514 TYR C OXT sing N N 515 TYR CB CG sing N N 516 TYR CB HB2 sing N N 517 TYR CB HB3 sing N N 518 TYR CG CD1 doub Y N 519 TYR CG CD2 sing Y N 520 TYR CD1 CE1 sing Y N 521 TYR CD1 HD1 sing N N 522 TYR CD2 CE2 doub Y N 523 TYR CD2 HD2 sing N N 524 TYR CE1 CZ doub Y N 525 TYR CE1 HE1 sing N N 526 TYR CE2 CZ sing Y N 527 TYR CE2 HE2 sing N N 528 TYR CZ OH sing N N 529 TYR OH HH sing N N 530 TYR OXT HXT sing N N 531 VAL N CA sing N N 532 VAL N H sing N N 533 VAL N H2 sing N N 534 VAL CA C sing N N 535 VAL CA CB sing N N 536 VAL CA HA sing N N 537 VAL C O doub N N 538 VAL C OXT sing N N 539 VAL CB CG1 sing N N 540 VAL CB CG2 sing N N 541 VAL CB HB sing N N 542 VAL CG1 HG11 sing N N 543 VAL CG1 HG12 sing N N 544 VAL CG1 HG13 sing N N 545 VAL CG2 HG21 sing N N 546 VAL CG2 HG22 sing N N 547 VAL CG2 HG23 sing N N 548 VAL OXT HXT sing N N 549 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 6OGK 'double helix' 6OGK 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 1 1_555 C DC 12 1_555 -0.362 -0.052 0.148 -15.661 -3.215 2.070 1 D_DG1:DC12_C D 1 ? C 12 ? 19 1 1 B DC 2 1_555 C DG 11 1_555 0.350 -0.294 0.226 -2.092 -6.319 -1.376 2 D_DC2:DG11_C D 2 ? C 11 ? 19 1 1 B DC 3 1_555 C DG 10 1_555 0.143 -0.127 0.615 -7.827 -12.722 -0.399 3 D_DC3:DG10_C D 3 ? C 10 ? 19 1 1 B DT 4 1_555 C DA 9 1_555 -0.172 -0.180 -0.041 -6.471 -16.634 2.169 4 D_DT4:DA9_C D 4 ? C 9 ? 20 1 1 B DA 5 1_555 C DT 8 1_555 0.210 -0.147 0.076 0.418 -6.124 -0.708 5 D_DA5:DT8_C D 5 ? C 8 ? 20 1 1 B 5CM 6 1_555 C DG 7 1_555 0.332 -0.162 -0.024 9.991 -8.174 -2.244 6 D_5CM6:DG7_C D 6 ? C 7 ? 19 1 1 B DA 7 1_555 C DT 6 1_555 0.134 -0.197 -0.055 -2.157 -6.370 0.431 7 D_DA7:DT6_C D 7 ? C 6 ? 20 1 1 B DC 8 1_555 C DG 5 1_555 0.041 -0.168 0.174 5.742 -12.718 -1.067 8 D_DC8:DG5_C D 8 ? C 5 ? 19 1 1 B DT 9 1_555 C DA 4 1_555 -0.110 -0.165 0.051 0.899 -13.560 0.773 9 D_DT9:DA4_C D 9 ? C 4 ? 20 1 1 B DC 10 1_555 C DG 3 1_555 0.188 -0.299 0.351 2.416 -5.686 0.145 10 D_DC10:DG3_C D 10 ? C 3 ? 19 1 1 B DC 11 1_555 C DG 2 1_555 0.048 -0.184 0.760 2.366 -10.366 -1.840 11 D_DC11:DG2_C D 11 ? C 2 ? 19 1 1 B DG 12 1_555 C DC 1 1_555 -0.081 -0.142 0.546 9.469 4.231 0.631 12 D_DG12:DC1_C D 12 ? C 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DG 1 1_555 C DC 12 1_555 B DC 2 1_555 C DG 11 1_555 -0.903 -0.192 2.847 -4.352 2.110 27.995 -0.823 0.950 2.928 4.321 8.911 28.401 1 DD_DG1DC2:DG11DC12_CC D 1 ? C 12 ? D 2 ? C 11 ? 1 B DC 2 1_555 C DG 11 1_555 B DC 3 1_555 C DG 10 1_555 0.067 0.113 3.498 -0.529 3.804 34.598 -0.432 -0.198 3.489 6.373 0.887 34.804 2 DD_DC2DC3:DG10DG11_CC D 2 ? C 11 ? D 3 ? C 10 ? 1 B DC 3 1_555 C DG 10 1_555 B DT 4 1_555 C DA 9 1_555 -0.152 0.226 3.276 5.718 2.371 31.467 -0.018 1.304 3.208 4.319 -10.417 32.055 3 DD_DC3DT4:DA9DG10_CC D 3 ? C 10 ? D 4 ? C 9 ? 1 B DT 4 1_555 C DA 9 1_555 B DA 5 1_555 C DT 8 1_555 0.851 1.332 3.169 2.462 -1.750 39.613 2.158 -0.976 3.154 -2.578 -3.626 39.723 4 DD_DT4DA5:DT8DA9_CC D 4 ? C 9 ? D 5 ? C 8 ? 1 B DA 5 1_555 C DT 8 1_555 B 5CM 6 1_555 C DG 7 1_555 0.509 -0.450 3.118 0.989 -1.028 25.817 -0.731 -0.873 3.150 -2.300 -2.211 25.856 5 DD_DA55CM6:DG7DT8_CC D 5 ? C 8 ? D 6 ? C 7 ? 1 B 5CM 6 1_555 C DG 7 1_555 B DA 7 1_555 C DT 6 1_555 -0.057 -0.427 3.758 1.247 -5.576 45.946 0.005 0.195 3.780 -7.111 -1.591 46.281 6 DD_5CM6DA7:DT6DG7_CC D 6 ? C 7 ? D 7 ? C 6 ? 1 B DA 7 1_555 C DT 6 1_555 B DC 8 1_555 C DG 5 1_555 0.312 -0.424 3.081 -3.278 1.567 29.951 -1.113 -1.223 3.005 3.018 6.313 30.165 7 DD_DA7DC8:DG5DT6_CC D 7 ? C 6 ? D 8 ? C 5 ? 1 B DC 8 1_555 C DG 5 1_555 B DT 9 1_555 C DA 4 1_555 -0.597 -0.460 3.364 1.072 0.126 34.016 -0.807 1.195 3.342 0.215 -1.831 34.033 8 DD_DC8DT9:DA4DG5_CC D 8 ? C 5 ? D 9 ? C 4 ? 1 B DT 9 1_555 C DA 4 1_555 B DC 10 1_555 C DG 3 1_555 0.796 1.717 3.306 3.276 0.391 40.796 2.412 -0.772 3.373 0.559 -4.690 40.923 9 DD_DT9DC10:DG3DA4_CC D 9 ? C 4 ? D 10 ? C 3 ? 1 B DC 10 1_555 C DG 3 1_555 B DC 11 1_555 C DG 2 1_555 -0.104 2.563 3.494 0.984 -5.744 40.941 4.257 0.255 3.119 -8.162 -1.398 41.336 10 DD_DC10DC11:DG2DG3_CC D 10 ? C 3 ? D 11 ? C 2 ? 1 B DC 11 1_555 C DG 2 1_555 B DG 12 1_555 C DC 1 1_555 0.347 3.015 3.453 0.010 -13.501 42.430 5.139 -0.458 2.432 -18.113 -0.014 44.432 11 DD_DC11DG12:DC1DG2_CC D 11 ? C 2 ? D 12 ? C 1 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'UNKNOWN ATOM OR ION' UNX 5 'CALCIUM ION' CA 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 6C1Y _pdbx_initial_refinement_model.details 'pdb entry 6c1y' # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support homology _pdbx_struct_assembly_auth_evidence.details 'pdb entry 3c2i' #