HEADER HYDROLASE/HYDROLASE INHIBITOR 06-APR-19 6OHQ TITLE STRUCTURE OF COMPOUND 4 BOUND HUMAN PHOSPHOLIPASE D2 CATALYTIC DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHOLIPASE D2; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: HPLD2,CHOLINE PHOSPHATASE 2,PLD1C,PHOSPHATIDYLCHOLINE- COMPND 5 HYDROLYZING PHOSPHOLIPASE D2; COMPND 6 EC: 3.1.4.4; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PLD2; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7111 KEYWDS PHOSPHODIESTERASE, HYDROLASE, HKD MOTIF, HYDROLASE-HYDROLASE KEYWDS 2 INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR C.M.METRICK,J.V.CHODAPARAMBIL REVDAT 3 11-OCT-23 6OHQ 1 REMARK REVDAT 2 01-APR-20 6OHQ 1 JRNL REVDAT 1 19-FEB-20 6OHQ 0 JRNL AUTH C.M.METRICK,E.A.PETERSON,J.C.SANTORO,I.J.ENYEDY,P.MURUGAN, JRNL AUTH 2 T.CHEN,K.MICHELSEN,M.CULLIVAN,K.A.SPILKER,P.R.KUMAR, JRNL AUTH 3 T.L.MAY-DRACKA,J.V.CHODAPARAMBIL JRNL TITL HUMAN PLD STRUCTURES ENABLE DRUG DESIGN AND CHARACTERIZATION JRNL TITL 2 OF ISOENZYME SELECTIVITY. JRNL REF NAT.CHEM.BIOL. V. 16 391 2020 JRNL REFN ESSN 1552-4469 JRNL PMID 32042197 JRNL DOI 10.1038/S41589-019-0458-4 REMARK 2 REMARK 2 RESOLUTION. 2.69 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.69 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.32 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 31179 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.259 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.090 REMARK 3 FREE R VALUE TEST SET COUNT : 1587 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 5.9892 - 4.7551 1.00 2745 148 0.1820 0.2428 REMARK 3 2 4.7551 - 4.1543 0.97 2698 125 0.1639 0.2175 REMARK 3 3 4.1543 - 3.7747 0.98 2686 156 0.1774 0.2418 REMARK 3 4 3.7747 - 3.5042 0.99 2721 141 0.1897 0.2646 REMARK 3 5 3.5042 - 3.2976 1.00 2729 140 0.2121 0.2664 REMARK 3 6 3.2976 - 3.1325 1.00 2741 130 0.2323 0.2833 REMARK 3 7 3.1325 - 2.9962 1.00 2743 139 0.2520 0.2783 REMARK 3 8 2.9962 - 2.8808 0.97 2657 138 0.2571 0.2896 REMARK 3 9 2.8808 - 2.7814 0.98 2676 138 0.2806 0.3267 REMARK 3 10 2.8000 - 2.7000 0.97 2705 163 0.2013 0.2399 REMARK 3 11 2.7814 - 2.6945 0.93 2491 169 0.3012 0.3291 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.360 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.560 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.16 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 315 THROUGH 340 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.8439 3.2905 12.0534 REMARK 3 T TENSOR REMARK 3 T11: 0.4965 T22: 0.2513 REMARK 3 T33: 0.3610 T12: 0.0290 REMARK 3 T13: 0.0457 T23: -0.0143 REMARK 3 L TENSOR REMARK 3 L11: 4.1516 L22: 3.7066 REMARK 3 L33: 3.3181 L12: -0.7412 REMARK 3 L13: 0.1928 L23: 0.6577 REMARK 3 S TENSOR REMARK 3 S11: 0.0588 S12: 0.0499 S13: -0.6374 REMARK 3 S21: 0.0734 S22: 0.0599 S23: 0.1293 REMARK 3 S31: 0.5352 S32: 0.2208 S33: -0.1037 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 341 THROUGH 421 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.4831 9.2023 -10.9309 REMARK 3 T TENSOR REMARK 3 T11: 0.5994 T22: 0.2629 REMARK 3 T33: 0.2517 T12: -0.0328 REMARK 3 T13: 0.0766 T23: -0.0018 REMARK 3 L TENSOR REMARK 3 L11: 2.6286 L22: 3.2435 REMARK 3 L33: 1.7110 L12: -0.5979 REMARK 3 L13: 0.5141 L23: 0.5564 REMARK 3 S TENSOR REMARK 3 S11: 0.0406 S12: 0.2382 S13: -0.1724 REMARK 3 S21: -0.4235 S22: 0.0413 S23: -0.0298 REMARK 3 S31: 0.1429 S32: 0.0653 S33: -0.0589 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 422 THROUGH 476 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.9193 12.7929 -4.3146 REMARK 3 T TENSOR REMARK 3 T11: 0.5447 T22: 0.2192 REMARK 3 T33: 0.2541 T12: -0.0022 REMARK 3 T13: 0.0781 T23: -0.0001 REMARK 3 L TENSOR REMARK 3 L11: 1.4703 L22: 0.5671 REMARK 3 L33: 1.1028 L12: -0.3003 REMARK 3 L13: -0.2404 L23: -0.2573 REMARK 3 S TENSOR REMARK 3 S11: 0.0391 S12: -0.0013 S13: 0.0207 REMARK 3 S21: -0.3624 S22: 0.0091 S23: -0.0686 REMARK 3 S31: -0.0678 S32: 0.0492 S33: -0.0237 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 498 THROUGH 549 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.2188 25.3479 -11.4038 REMARK 3 T TENSOR REMARK 3 T11: 0.5972 T22: 0.3246 REMARK 3 T33: 0.3255 T12: 0.0033 REMARK 3 T13: 0.1058 T23: -0.0126 REMARK 3 L TENSOR REMARK 3 L11: 2.3505 L22: 2.0491 REMARK 3 L33: 1.5081 L12: -0.5851 REMARK 3 L13: 0.6715 L23: -0.3604 REMARK 3 S TENSOR REMARK 3 S11: 0.0250 S12: 0.4483 S13: 0.1490 REMARK 3 S21: -0.7163 S22: 0.0845 S23: -0.0167 REMARK 3 S31: -0.0810 S32: -0.0883 S33: -0.1464 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 550 THROUGH 599 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.3847 -3.8528 0.6003 REMARK 3 T TENSOR REMARK 3 T11: 0.6755 T22: 0.2064 REMARK 3 T33: 0.3726 T12: -0.0711 REMARK 3 T13: 0.1140 T23: 0.0170 REMARK 3 L TENSOR REMARK 3 L11: 6.9722 L22: 0.7626 REMARK 3 L33: 2.7787 L12: -1.3980 REMARK 3 L13: 2.0119 L23: 0.3969 REMARK 3 S TENSOR REMARK 3 S11: -0.0428 S12: 0.0121 S13: -0.1795 REMARK 3 S21: 0.0120 S22: 0.0079 S23: -0.0636 REMARK 3 S31: 0.0809 S32: 0.0211 S33: 0.1008 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 600 THROUGH 716 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.8768 21.5142 17.5100 REMARK 3 T TENSOR REMARK 3 T11: 0.4791 T22: 0.3034 REMARK 3 T33: 0.2694 T12: 0.0101 REMARK 3 T13: 0.0680 T23: 0.0142 REMARK 3 L TENSOR REMARK 3 L11: 1.3057 L22: 1.3425 REMARK 3 L33: 0.5284 L12: 0.2588 REMARK 3 L13: -0.0269 L23: 0.4811 REMARK 3 S TENSOR REMARK 3 S11: -0.0651 S12: -0.2327 S13: 0.0058 REMARK 3 S21: 0.0392 S22: -0.0075 S23: -0.0172 REMARK 3 S31: -0.0893 S32: -0.0859 S33: 0.0256 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 717 THROUGH 779 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.9893 28.5610 12.6433 REMARK 3 T TENSOR REMARK 3 T11: 0.4155 T22: 0.2076 REMARK 3 T33: 0.2746 T12: 0.0186 REMARK 3 T13: 0.0427 T23: 0.0037 REMARK 3 L TENSOR REMARK 3 L11: 0.9809 L22: 0.8237 REMARK 3 L33: 0.6197 L12: 0.2367 REMARK 3 L13: -0.3433 L23: 0.5590 REMARK 3 S TENSOR REMARK 3 S11: 0.0003 S12: -0.1107 S13: 0.0874 REMARK 3 S21: -0.0643 S22: 0.1532 S23: 0.1280 REMARK 3 S31: -0.1231 S32: -0.0406 S33: -0.0185 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 780 THROUGH 839 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.0094 19.6963 13.9113 REMARK 3 T TENSOR REMARK 3 T11: 0.3617 T22: 0.2302 REMARK 3 T33: 0.2407 T12: 0.0089 REMARK 3 T13: 0.1028 T23: -0.0247 REMARK 3 L TENSOR REMARK 3 L11: 4.2565 L22: 1.9295 REMARK 3 L33: 1.9707 L12: 1.3817 REMARK 3 L13: 1.6905 L23: 0.7849 REMARK 3 S TENSOR REMARK 3 S11: 0.0858 S12: 0.0760 S13: 0.0214 REMARK 3 S21: -0.0764 S22: 0.0065 S23: -0.2967 REMARK 3 S31: -0.0117 S32: 0.3345 S33: -0.0782 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 840 THROUGH 933 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.2914 41.2410 7.9535 REMARK 3 T TENSOR REMARK 3 T11: 0.6043 T22: 0.3249 REMARK 3 T33: 0.4263 T12: 0.0123 REMARK 3 T13: 0.1077 T23: -0.0143 REMARK 3 L TENSOR REMARK 3 L11: 0.3391 L22: 2.1776 REMARK 3 L33: 1.4337 L12: -0.0782 REMARK 3 L13: -0.1172 L23: -0.6633 REMARK 3 S TENSOR REMARK 3 S11: 0.0711 S12: 0.0326 S13: 0.1950 REMARK 3 S21: -0.0131 S22: 0.0022 S23: 0.1427 REMARK 3 S31: -0.1822 S32: -0.1191 S33: -0.0693 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 315 THROUGH 421 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.3877 -19.7384 56.9491 REMARK 3 T TENSOR REMARK 3 T11: 0.5884 T22: 0.4402 REMARK 3 T33: 0.3445 T12: -0.1046 REMARK 3 T13: 0.0295 T23: 0.0743 REMARK 3 L TENSOR REMARK 3 L11: 1.9239 L22: 1.0052 REMARK 3 L33: 2.5744 L12: 0.8058 REMARK 3 L13: 0.6493 L23: 0.3672 REMARK 3 S TENSOR REMARK 3 S11: 0.3854 S12: -0.5898 S13: -0.2011 REMARK 3 S21: 0.4256 S22: -0.2705 S23: -0.1058 REMARK 3 S31: 0.2694 S32: -0.2899 S33: 0.0170 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 422 THROUGH 779 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.1562 -10.8284 44.3677 REMARK 3 T TENSOR REMARK 3 T11: 0.3674 T22: 0.2370 REMARK 3 T33: 0.2974 T12: -0.0131 REMARK 3 T13: 0.0608 T23: 0.0157 REMARK 3 L TENSOR REMARK 3 L11: 1.3729 L22: 1.5967 REMARK 3 L33: 1.9122 L12: 0.4294 REMARK 3 L13: -0.0597 L23: 0.3695 REMARK 3 S TENSOR REMARK 3 S11: 0.0851 S12: -0.2701 S13: -0.0402 REMARK 3 S21: 0.2465 S22: -0.1381 S23: -0.1405 REMARK 3 S31: 0.0044 S32: -0.0268 S33: 0.0165 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 780 THROUGH 933 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.9981 2.2159 36.4699 REMARK 3 T TENSOR REMARK 3 T11: 0.4743 T22: 0.3177 REMARK 3 T33: 0.2669 T12: 0.0723 REMARK 3 T13: 0.0947 T23: 0.0184 REMARK 3 L TENSOR REMARK 3 L11: 1.9954 L22: 2.9642 REMARK 3 L33: 1.4389 L12: 0.4362 REMARK 3 L13: 0.7746 L23: 0.4477 REMARK 3 S TENSOR REMARK 3 S11: -0.1282 S12: -0.1705 S13: 0.4198 REMARK 3 S21: -0.0400 S22: -0.0373 S23: 0.0348 REMARK 3 S31: -0.3478 S32: -0.0870 S33: 0.1493 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6OHQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-APR-19. REMARK 100 THE DEPOSITION ID IS D_1000240714. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-NOV-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43049 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.690 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 3.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 6OHM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M AMMONIUM SULFATE, 20% PEG3350, REMARK 280 0.1M BIS-TRIS PH 6.7, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 45.11350 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 65.75850 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 45.11350 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 65.75850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 294 REMARK 465 SER A 295 REMARK 465 TYR A 296 REMARK 465 ARG A 297 REMARK 465 GLN A 298 REMARK 465 ALA A 299 REMARK 465 ARG A 300 REMARK 465 TRP A 301 REMARK 465 TRP A 302 REMARK 465 ALA A 303 REMARK 465 GLN A 304 REMARK 465 GLU A 305 REMARK 465 ILE A 306 REMARK 465 THR A 307 REMARK 465 GLU A 308 REMARK 465 LEU A 309 REMARK 465 ALA A 310 REMARK 465 GLN A 311 REMARK 465 GLY A 312 REMARK 465 PRO A 313 REMARK 465 GLY A 314 REMARK 465 LEU A 407 REMARK 465 ALA A 408 REMARK 465 ASP A 477 REMARK 465 SER A 478 REMARK 465 SER A 479 REMARK 465 GLU A 480 REMARK 465 SER A 481 REMARK 465 ALA A 482 REMARK 465 ALA A 483 REMARK 465 SER A 484 REMARK 465 GLN A 485 REMARK 465 PRO A 486 REMARK 465 PRO A 487 REMARK 465 THR A 488 REMARK 465 PRO A 489 REMARK 465 ARG A 490 REMARK 465 PRO A 491 REMARK 465 ASP A 492 REMARK 465 SER A 493 REMARK 465 PRO A 494 REMARK 465 ALA A 495 REMARK 465 THR A 496 REMARK 465 PRO A 497 REMARK 465 GLN A 591 REMARK 465 LEU A 592 REMARK 465 PRO A 593 REMARK 465 PHE A 594 REMARK 465 THR A 595 REMARK 465 LEU A 596 REMARK 465 PRO A 597 REMARK 465 ALA A 826 REMARK 465 ASN A 827 REMARK 465 THR A 828 REMARK 465 ARG A 829 REMARK 465 LEU A 920 REMARK 465 GLY A 921 REMARK 465 SER A 922 REMARK 465 LYS A 923 REMARK 465 GLU A 924 REMARK 465 SER B 294 REMARK 465 SER B 295 REMARK 465 TYR B 296 REMARK 465 ARG B 297 REMARK 465 GLN B 298 REMARK 465 ALA B 299 REMARK 465 ARG B 300 REMARK 465 TRP B 301 REMARK 465 TRP B 302 REMARK 465 ALA B 303 REMARK 465 GLN B 304 REMARK 465 GLU B 305 REMARK 465 ILE B 306 REMARK 465 THR B 307 REMARK 465 GLU B 308 REMARK 465 LEU B 309 REMARK 465 ALA B 310 REMARK 465 GLN B 311 REMARK 465 GLY B 312 REMARK 465 PRO B 313 REMARK 465 GLY B 314 REMARK 465 LEU B 407 REMARK 465 ALA B 408 REMARK 465 ASP B 477 REMARK 465 SER B 478 REMARK 465 SER B 479 REMARK 465 GLU B 480 REMARK 465 SER B 481 REMARK 465 ALA B 482 REMARK 465 ALA B 483 REMARK 465 SER B 484 REMARK 465 GLN B 485 REMARK 465 PRO B 486 REMARK 465 PRO B 487 REMARK 465 THR B 488 REMARK 465 PRO B 489 REMARK 465 ARG B 490 REMARK 465 PRO B 491 REMARK 465 ASP B 492 REMARK 465 SER B 493 REMARK 465 PRO B 494 REMARK 465 ALA B 495 REMARK 465 THR B 496 REMARK 465 PRO B 497 REMARK 465 THR B 586 REMARK 465 SER B 587 REMARK 465 THR B 588 REMARK 465 ALA B 589 REMARK 465 ASN B 590 REMARK 465 GLN B 591 REMARK 465 LEU B 592 REMARK 465 PRO B 593 REMARK 465 PHE B 594 REMARK 465 THR B 595 REMARK 465 ALA B 826 REMARK 465 ASN B 827 REMARK 465 THR B 828 REMARK 465 ARG B 829 REMARK 465 LEU B 920 REMARK 465 GLY B 921 REMARK 465 SER B 922 REMARK 465 LYS B 923 REMARK 465 GLU B 924 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 315 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 318 CG CD1 CD2 REMARK 470 ASN A 590 CG OD1 ND2 REMARK 470 ARG A 651 CD NE CZ NH1 NH2 REMARK 470 ARG B 315 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 318 CG CD1 CD2 REMARK 470 LYS B 567 CG CD CE NZ REMARK 470 LYS B 572 CG CD CE NZ REMARK 470 LYS B 574 CG CD CE NZ REMARK 470 ARG B 651 CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG A 553 O THR A 588 1.76 REMARK 500 O ARG A 783 O HOH A 1101 1.92 REMARK 500 OD1 ASP B 467 O HOH B 1101 1.93 REMARK 500 OE1 GLU A 357 O HOH A 1102 1.98 REMARK 500 N ASP A 498 O HOH A 1103 1.98 REMARK 500 NZ LYS B 388 O HOH B 1102 1.98 REMARK 500 O PRO B 331 O HOH B 1103 1.99 REMARK 500 OE1 GLU A 714 O HOH A 1104 2.00 REMARK 500 O LEU B 522 O HOH B 1104 2.02 REMARK 500 O2 SO4 B 1008 O HOH B 1105 2.05 REMARK 500 O HOH B 1130 O HOH B 1156 2.08 REMARK 500 O HOH A 1144 O HOH A 1170 2.08 REMARK 500 O HOH A 1188 O HOH A 1199 2.09 REMARK 500 O HOH A 1111 O HOH A 1167 2.09 REMARK 500 O HOH A 1180 O HOH A 1197 2.13 REMARK 500 O ILE B 622 O HOH B 1106 2.14 REMARK 500 OD2 ASP A 793 O HOH A 1105 2.14 REMARK 500 NE1 TRP B 673 O HOH B 1107 2.16 REMARK 500 OD2 ASP A 316 O HOH A 1106 2.16 REMARK 500 O SER B 648 O HOH B 1108 2.18 REMARK 500 O TRP A 613 O HOH A 1107 2.18 REMARK 500 O GLN A 319 O HOH A 1108 2.19 REMARK 500 N TYR A 371 O4 SO4 A 1013 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU A 392 ND1 HIS B 501 1554 2.17 REMARK 500 OG1 THR A 577 O GLY B 672 2555 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 389 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 321 -156.50 -120.49 REMARK 500 ASN A 340 154.76 69.48 REMARK 500 GLU A 357 -58.74 -132.13 REMARK 500 TRP A 381 -5.14 74.28 REMARK 500 VAL A 451 -32.27 -133.71 REMARK 500 ARG A 524 79.84 -119.06 REMARK 500 HIS A 635 -50.51 -137.37 REMARK 500 SER A 646 -158.49 -146.04 REMARK 500 CYS A 647 97.73 71.12 REMARK 500 LEU A 710 -62.19 -94.45 REMARK 500 ARG A 765 -30.97 -147.31 REMARK 500 ARG A 783 -103.14 -105.44 REMARK 500 HIS B 321 -156.84 -111.69 REMARK 500 ASN B 340 165.84 65.58 REMARK 500 GLU B 357 -69.35 -128.78 REMARK 500 TRP B 381 -9.30 71.95 REMARK 500 ASP B 474 65.85 -153.17 REMARK 500 GLN B 521 78.12 38.64 REMARK 500 ARG B 524 75.80 -109.90 REMARK 500 LYS B 570 160.96 104.39 REMARK 500 ALA B 571 -137.84 70.10 REMARK 500 PRO B 576 26.40 -66.64 REMARK 500 ALA B 615 -148.28 -129.61 REMARK 500 HIS B 635 -53.68 -136.55 REMARK 500 SER B 646 -153.37 -151.41 REMARK 500 CYS B 647 97.34 65.23 REMARK 500 LYS B 656 40.02 -106.15 REMARK 500 ASN B 697 -61.25 -20.76 REMARK 500 CYS B 711 14.92 -153.29 REMARK 500 LYS B 758 59.87 -141.36 REMARK 500 ARG B 783 -111.03 -114.21 REMARK 500 SER B 799 -159.43 -138.35 REMARK 500 ALA B 880 0.29 -68.91 REMARK 500 LEU B 916 -15.52 70.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER A 585 THR A 586 -135.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1206 DISTANCE = 6.57 ANGSTROMS REMARK 525 HOH A1207 DISTANCE = 8.01 ANGSTROMS REMARK 525 HOH B1192 DISTANCE = 5.97 ANGSTROMS REMARK 525 HOH B1193 DISTANCE = 6.16 ANGSTROMS REMARK 525 HOH B1194 DISTANCE = 7.36 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MKA A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 1005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 1006 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 1007 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 1008 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 1009 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 1010 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 1011 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 1012 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 1013 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MKA B 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 1005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 1006 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 1007 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 1008 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 1009 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 1010 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 1011 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 1012 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 1013 DBREF 6OHQ A 294 933 UNP O14939 PLD2_HUMAN 294 933 DBREF 6OHQ B 294 933 UNP O14939 PLD2_HUMAN 294 933 SEQRES 1 A 640 SER SER TYR ARG GLN ALA ARG TRP TRP ALA GLN GLU ILE SEQRES 2 A 640 THR GLU LEU ALA GLN GLY PRO GLY ARG ASP PHE LEU GLN SEQRES 3 A 640 LEU HIS ARG HIS ASP SER TYR ALA PRO PRO ARG PRO GLY SEQRES 4 A 640 THR LEU ALA ARG TRP PHE VAL ASN GLY ALA GLY TYR PHE SEQRES 5 A 640 ALA ALA VAL ALA ASP ALA ILE LEU ARG ALA GLN GLU GLU SEQRES 6 A 640 ILE PHE ILE THR ASP TRP TRP LEU SER PRO GLU VAL TYR SEQRES 7 A 640 LEU LYS ARG PRO ALA HIS SER ASP ASP TRP ARG LEU ASP SEQRES 8 A 640 ILE MET LEU LYS ARG LYS ALA GLU GLU GLY VAL ARG VAL SEQRES 9 A 640 SER ILE LEU LEU PHE LYS GLU VAL GLU LEU ALA LEU GLY SEQRES 10 A 640 ILE ASN SER GLY TYR SER LYS ARG ALA LEU MET LEU LEU SEQRES 11 A 640 HIS PRO ASN ILE LYS VAL MET ARG HIS PRO ASP GLN VAL SEQRES 12 A 640 THR LEU TRP ALA HIS HIS GLU LYS LEU LEU VAL VAL ASP SEQRES 13 A 640 GLN VAL VAL ALA PHE LEU GLY GLY LEU ASP LEU ALA TYR SEQRES 14 A 640 GLY ARG TRP ASP ASP LEU HIS TYR ARG LEU THR ASP LEU SEQRES 15 A 640 GLY ASP SER SER GLU SER ALA ALA SER GLN PRO PRO THR SEQRES 16 A 640 PRO ARG PRO ASP SER PRO ALA THR PRO ASP LEU SER HIS SEQRES 17 A 640 ASN GLN PHE PHE TRP LEU GLY LYS ASP TYR SER ASN LEU SEQRES 18 A 640 ILE THR LYS ASP TRP VAL GLN LEU ASP ARG PRO PHE GLU SEQRES 19 A 640 ASP PHE ILE ASP ARG GLU THR THR PRO ARG MET PRO TRP SEQRES 20 A 640 ARG ASP VAL GLY VAL VAL VAL HIS GLY LEU PRO ALA ARG SEQRES 21 A 640 ASP LEU ALA ARG HIS PHE ILE GLN ARG TRP ASN PHE THR SEQRES 22 A 640 LYS THR THR LYS ALA LYS TYR LYS THR PRO THR TYR PRO SEQRES 23 A 640 TYR LEU LEU PRO LYS SER THR SER THR ALA ASN GLN LEU SEQRES 24 A 640 PRO PHE THR LEU PRO GLY GLY GLN CYS THR THR VAL GLN SEQRES 25 A 640 VAL LEU ARG SER VAL ASP ARG TRP SER ALA GLY THR LEU SEQRES 26 A 640 GLU ASN SER ILE LEU ASN ALA TYR LEU HIS THR ILE ARG SEQRES 27 A 640 GLU SER GLN HIS PHE LEU TYR ILE GLU ASN GLN PHE PHE SEQRES 28 A 640 ILE SER CYS SER ASP GLY ARG THR VAL LEU ASN LYS VAL SEQRES 29 A 640 GLY ASP GLU ILE VAL ASP ARG ILE LEU LYS ALA HIS LYS SEQRES 30 A 640 GLN GLY TRP CYS TYR ARG VAL TYR VAL LEU LEU PRO LEU SEQRES 31 A 640 LEU PRO GLY PHE GLU GLY ASP ILE SER THR GLY GLY GLY SEQRES 32 A 640 ASN SER ILE GLN ALA ILE LEU HIS PHE THR TYR ARG THR SEQRES 33 A 640 LEU CYS ARG GLY GLU TYR SER ILE LEU HIS ARG LEU LYS SEQRES 34 A 640 ALA ALA MET GLY THR ALA TRP ARG ASP TYR ILE SER ILE SEQRES 35 A 640 CYS GLY LEU ARG THR HIS GLY GLU LEU GLY GLY HIS PRO SEQRES 36 A 640 VAL SER GLU LEU ILE TYR ILE HIS SER LYS VAL LEU ILE SEQRES 37 A 640 ALA ASP ASP ARG THR VAL ILE ILE GLY SER ALA ASN ILE SEQRES 38 A 640 ASN ASP ARG SER LEU LEU GLY LYS ARG ASP SER GLU LEU SEQRES 39 A 640 ALA VAL LEU ILE GLU ASP THR GLU THR GLU PRO SER LEU SEQRES 40 A 640 MET ASN GLY ALA GLU TYR GLN ALA GLY ARG PHE ALA LEU SEQRES 41 A 640 SER LEU ARG LYS HIS CYS PHE GLY VAL ILE LEU GLY ALA SEQRES 42 A 640 ASN THR ARG PRO ASP LEU ASP LEU ARG ASP PRO ILE CYS SEQRES 43 A 640 ASP ASP PHE PHE GLN LEU TRP GLN ASP MET ALA GLU SER SEQRES 44 A 640 ASN ALA ASN ILE TYR GLU GLN ILE PHE ARG CYS LEU PRO SEQRES 45 A 640 SER ASN ALA THR ARG SER LEU ARG THR LEU ARG GLU TYR SEQRES 46 A 640 VAL ALA VAL GLU PRO LEU ALA THR VAL SER PRO PRO LEU SEQRES 47 A 640 ALA ARG SER GLU LEU THR GLN VAL GLN GLY HIS LEU VAL SEQRES 48 A 640 HIS PHE PRO LEU LYS PHE LEU GLU ASP GLU SER LEU LEU SEQRES 49 A 640 PRO PRO LEU GLY SER LYS GLU GLY MET ILE PRO LEU GLU SEQRES 50 A 640 VAL TRP THR SEQRES 1 B 640 SER SER TYR ARG GLN ALA ARG TRP TRP ALA GLN GLU ILE SEQRES 2 B 640 THR GLU LEU ALA GLN GLY PRO GLY ARG ASP PHE LEU GLN SEQRES 3 B 640 LEU HIS ARG HIS ASP SER TYR ALA PRO PRO ARG PRO GLY SEQRES 4 B 640 THR LEU ALA ARG TRP PHE VAL ASN GLY ALA GLY TYR PHE SEQRES 5 B 640 ALA ALA VAL ALA ASP ALA ILE LEU ARG ALA GLN GLU GLU SEQRES 6 B 640 ILE PHE ILE THR ASP TRP TRP LEU SER PRO GLU VAL TYR SEQRES 7 B 640 LEU LYS ARG PRO ALA HIS SER ASP ASP TRP ARG LEU ASP SEQRES 8 B 640 ILE MET LEU LYS ARG LYS ALA GLU GLU GLY VAL ARG VAL SEQRES 9 B 640 SER ILE LEU LEU PHE LYS GLU VAL GLU LEU ALA LEU GLY SEQRES 10 B 640 ILE ASN SER GLY TYR SER LYS ARG ALA LEU MET LEU LEU SEQRES 11 B 640 HIS PRO ASN ILE LYS VAL MET ARG HIS PRO ASP GLN VAL SEQRES 12 B 640 THR LEU TRP ALA HIS HIS GLU LYS LEU LEU VAL VAL ASP SEQRES 13 B 640 GLN VAL VAL ALA PHE LEU GLY GLY LEU ASP LEU ALA TYR SEQRES 14 B 640 GLY ARG TRP ASP ASP LEU HIS TYR ARG LEU THR ASP LEU SEQRES 15 B 640 GLY ASP SER SER GLU SER ALA ALA SER GLN PRO PRO THR SEQRES 16 B 640 PRO ARG PRO ASP SER PRO ALA THR PRO ASP LEU SER HIS SEQRES 17 B 640 ASN GLN PHE PHE TRP LEU GLY LYS ASP TYR SER ASN LEU SEQRES 18 B 640 ILE THR LYS ASP TRP VAL GLN LEU ASP ARG PRO PHE GLU SEQRES 19 B 640 ASP PHE ILE ASP ARG GLU THR THR PRO ARG MET PRO TRP SEQRES 20 B 640 ARG ASP VAL GLY VAL VAL VAL HIS GLY LEU PRO ALA ARG SEQRES 21 B 640 ASP LEU ALA ARG HIS PHE ILE GLN ARG TRP ASN PHE THR SEQRES 22 B 640 LYS THR THR LYS ALA LYS TYR LYS THR PRO THR TYR PRO SEQRES 23 B 640 TYR LEU LEU PRO LYS SER THR SER THR ALA ASN GLN LEU SEQRES 24 B 640 PRO PHE THR LEU PRO GLY GLY GLN CYS THR THR VAL GLN SEQRES 25 B 640 VAL LEU ARG SER VAL ASP ARG TRP SER ALA GLY THR LEU SEQRES 26 B 640 GLU ASN SER ILE LEU ASN ALA TYR LEU HIS THR ILE ARG SEQRES 27 B 640 GLU SER GLN HIS PHE LEU TYR ILE GLU ASN GLN PHE PHE SEQRES 28 B 640 ILE SER CYS SER ASP GLY ARG THR VAL LEU ASN LYS VAL SEQRES 29 B 640 GLY ASP GLU ILE VAL ASP ARG ILE LEU LYS ALA HIS LYS SEQRES 30 B 640 GLN GLY TRP CYS TYR ARG VAL TYR VAL LEU LEU PRO LEU SEQRES 31 B 640 LEU PRO GLY PHE GLU GLY ASP ILE SER THR GLY GLY GLY SEQRES 32 B 640 ASN SER ILE GLN ALA ILE LEU HIS PHE THR TYR ARG THR SEQRES 33 B 640 LEU CYS ARG GLY GLU TYR SER ILE LEU HIS ARG LEU LYS SEQRES 34 B 640 ALA ALA MET GLY THR ALA TRP ARG ASP TYR ILE SER ILE SEQRES 35 B 640 CYS GLY LEU ARG THR HIS GLY GLU LEU GLY GLY HIS PRO SEQRES 36 B 640 VAL SER GLU LEU ILE TYR ILE HIS SER LYS VAL LEU ILE SEQRES 37 B 640 ALA ASP ASP ARG THR VAL ILE ILE GLY SER ALA ASN ILE SEQRES 38 B 640 ASN ASP ARG SER LEU LEU GLY LYS ARG ASP SER GLU LEU SEQRES 39 B 640 ALA VAL LEU ILE GLU ASP THR GLU THR GLU PRO SER LEU SEQRES 40 B 640 MET ASN GLY ALA GLU TYR GLN ALA GLY ARG PHE ALA LEU SEQRES 41 B 640 SER LEU ARG LYS HIS CYS PHE GLY VAL ILE LEU GLY ALA SEQRES 42 B 640 ASN THR ARG PRO ASP LEU ASP LEU ARG ASP PRO ILE CYS SEQRES 43 B 640 ASP ASP PHE PHE GLN LEU TRP GLN ASP MET ALA GLU SER SEQRES 44 B 640 ASN ALA ASN ILE TYR GLU GLN ILE PHE ARG CYS LEU PRO SEQRES 45 B 640 SER ASN ALA THR ARG SER LEU ARG THR LEU ARG GLU TYR SEQRES 46 B 640 VAL ALA VAL GLU PRO LEU ALA THR VAL SER PRO PRO LEU SEQRES 47 B 640 ALA ARG SER GLU LEU THR GLN VAL GLN GLY HIS LEU VAL SEQRES 48 B 640 HIS PHE PRO LEU LYS PHE LEU GLU ASP GLU SER LEU LEU SEQRES 49 B 640 PRO PRO LEU GLY SER LYS GLU GLY MET ILE PRO LEU GLU SEQRES 50 B 640 VAL TRP THR HET MKA A1001 29 HET SO4 A1002 5 HET SO4 A1003 5 HET SO4 A1004 5 HET SO4 A1005 5 HET SO4 A1006 5 HET SO4 A1007 5 HET SO4 A1008 5 HET SO4 A1009 5 HET SO4 A1010 5 HET SO4 A1011 5 HET SO4 A1012 5 HET SO4 A1013 5 HET MKA B1001 29 HET SO4 B1002 5 HET SO4 B1003 5 HET SO4 B1004 5 HET SO4 B1005 5 HET SO4 B1006 5 HET SO4 B1007 5 HET SO4 B1008 5 HET SO4 B1009 5 HET SO4 B1010 5 HET SO4 B1011 5 HET SO4 B1012 5 HET SO4 B1013 5 HETNAM MKA 4-FLUORO-N-{(2S)-1-[4-(2-OXO-2,3-DIHYDRO-1H- HETNAM 2 MKA BENZIMIDAZOL-1-YL)PIPERIDIN-1-YL]PROPAN-2-YL}BENZAMIDE HETNAM SO4 SULFATE ION FORMUL 3 MKA 2(C22 H25 F N4 O2) FORMUL 4 SO4 24(O4 S 2-) FORMUL 29 HOH *201(H2 O) HELIX 1 AA1 HIS A 321 SER A 325 5 5 HELIX 2 AA2 ASN A 340 ARG A 354 1 15 HELIX 3 AA3 ARG A 382 GLU A 392 1 11 HELIX 4 AA4 ASN A 412 HIS A 424 1 13 HELIX 5 AA5 LEU A 507 TYR A 511 5 5 HELIX 6 AA6 GLY A 549 THR A 568 1 20 HELIX 7 AA7 SER A 621 GLU A 632 1 12 HELIX 8 AA8 LYS A 656 GLY A 672 1 17 HELIX 9 AA9 ASP A 690 GLY A 694 5 5 HELIX 10 AB1 GLY A 696 CYS A 711 1 16 HELIX 11 AB2 SER A 716 GLY A 726 1 11 HELIX 12 AB3 THR A 727 ASP A 731 5 5 HELIX 13 AB4 ASN A 775 LEU A 780 1 6 HELIX 14 AB5 ARG A 810 LEU A 824 1 15 HELIX 15 AB6 CYS A 839 ARG A 862 1 24 HELIX 16 AB7 SER A 871 VAL A 879 1 9 HELIX 17 AB8 PRO A 883 SER A 888 1 6 HELIX 18 AB9 SER A 888 THR A 897 1 10 HELIX 19 AC1 PRO A 928 TRP A 932 5 5 HELIX 20 AC2 HIS B 321 SER B 325 5 5 HELIX 21 AC3 ASN B 340 ARG B 354 1 15 HELIX 22 AC4 ARG B 382 GLU B 393 1 12 HELIX 23 AC5 ASN B 412 LEU B 422 1 11 HELIX 24 AC6 LEU B 507 TYR B 511 5 5 HELIX 25 AC7 GLY B 549 THR B 568 1 20 HELIX 26 AC8 THR B 569 LYS B 574 5 6 HELIX 27 AC9 SER B 621 GLU B 632 1 12 HELIX 28 AD1 LYS B 656 GLY B 672 1 17 HELIX 29 AD2 GLY B 696 CYS B 711 1 16 HELIX 30 AD3 SER B 716 GLY B 726 1 11 HELIX 31 AD4 THR B 727 ASP B 731 5 5 HELIX 32 AD5 ASN B 775 LEU B 780 1 6 HELIX 33 AD6 ARG B 810 GLY B 825 1 16 HELIX 34 AD7 CYS B 839 ARG B 862 1 24 HELIX 35 AD8 SER B 871 ALA B 880 1 10 HELIX 36 AD9 PRO B 883 SER B 888 1 6 HELIX 37 AE1 SER B 888 THR B 897 1 10 HELIX 38 AE2 PRO B 928 TRP B 932 5 5 SHEET 1 AA115 ILE A 427 HIS A 432 0 SHEET 2 AA115 ARG A 396 PHE A 402 1 N ILE A 399 O LYS A 428 SHEET 3 AA115 GLU A 358 ASP A 363 1 N ILE A 361 O LEU A 400 SHEET 4 AA115 LYS A 444 VAL A 448 -1 O VAL A 447 N PHE A 360 SHEET 5 AA115 VAL A 452 GLY A 456 -1 O PHE A 454 N LEU A 446 SHEET 6 AA115 VAL A 543 HIS A 548 -1 O VAL A 545 N LEU A 455 SHEET 7 AA115 ARG A 330 VAL A 339 -1 N PHE A 338 O GLY A 544 SHEET 8 AA115 GLN A 600 VAL A 610 -1 O VAL A 604 N ARG A 330 SHEET 9 AA115 GLU A 786 ASP A 793 -1 O ALA A 788 N LEU A 607 SHEET 10 AA115 THR A 766 GLY A 770 -1 N VAL A 767 O ILE A 791 SHEET 11 AA115 LYS A 758 ALA A 762 -1 N ALA A 762 O THR A 766 SHEET 12 AA115 PHE A 636 ASN A 641 -1 N TYR A 638 O ILE A 761 SHEET 13 AA115 ARG A 676 LEU A 680 1 O TYR A 678 N ILE A 639 SHEET 14 AA115 ILE A 733 LEU A 744 1 O SER A 734 N VAL A 677 SHEET 15 AA115 HIS A 747 LEU A 752 -1 O GLU A 751 N THR A 740 SHEET 1 AA2 9 GLU A 619 ASN A 620 0 SHEET 2 AA2 9 GLN A 600 VAL A 610 -1 N VAL A 610 O GLU A 619 SHEET 3 AA2 9 GLU A 786 ASP A 793 -1 O ALA A 788 N LEU A 607 SHEET 4 AA2 9 THR A 766 GLY A 770 -1 N VAL A 767 O ILE A 791 SHEET 5 AA2 9 LYS A 758 ALA A 762 -1 N ALA A 762 O THR A 766 SHEET 6 AA2 9 PHE A 636 ASN A 641 -1 N TYR A 638 O ILE A 761 SHEET 7 AA2 9 ARG A 676 LEU A 680 1 O TYR A 678 N ILE A 639 SHEET 8 AA2 9 ILE A 733 LEU A 744 1 O SER A 734 N VAL A 677 SHEET 9 AA2 9 LEU A 903 HIS A 905 -1 O VAL A 904 N GLY A 737 SHEET 1 AA3 2 TRP A 540 ARG A 541 0 SHEET 2 AA3 2 TYR A 754 ILE A 755 1 O TYR A 754 N ARG A 541 SHEET 1 AA4 2 THR A 796 MET A 801 0 SHEET 2 AA4 2 ALA A 804 GLY A 809 -1 O ALA A 808 N GLU A 797 SHEET 1 AA515 ILE B 427 HIS B 432 0 SHEET 2 AA515 ARG B 396 PHE B 402 1 N VAL B 397 O LYS B 428 SHEET 3 AA515 GLU B 358 ASP B 363 1 N ILE B 361 O LEU B 400 SHEET 4 AA515 LEU B 445 VAL B 448 -1 O VAL B 447 N PHE B 360 SHEET 5 AA515 VAL B 452 GLY B 456 -1 O VAL B 452 N VAL B 448 SHEET 6 AA515 VAL B 543 HIS B 548 -1 O VAL B 547 N ALA B 453 SHEET 7 AA515 ARG B 330 VAL B 339 -1 N PHE B 338 O GLY B 544 SHEET 8 AA515 GLN B 600 VAL B 610 -1 O VAL B 604 N ARG B 330 SHEET 9 AA515 GLU B 786 ASP B 793 -1 O ALA B 788 N LEU B 607 SHEET 10 AA515 THR B 766 GLY B 770 -1 N VAL B 767 O ILE B 791 SHEET 11 AA515 LYS B 758 ALA B 762 -1 N LEU B 760 O ILE B 768 SHEET 12 AA515 PHE B 636 ASN B 641 -1 N TYR B 638 O ILE B 761 SHEET 13 AA515 ARG B 676 LEU B 680 1 O TYR B 678 N ILE B 639 SHEET 14 AA515 ILE B 733 LEU B 744 1 O CYS B 736 N VAL B 679 SHEET 15 AA515 HIS B 747 LEU B 752 -1 O VAL B 749 N GLY B 742 SHEET 1 AA6 9 GLU B 619 ASN B 620 0 SHEET 2 AA6 9 GLN B 600 VAL B 610 -1 N VAL B 610 O GLU B 619 SHEET 3 AA6 9 GLU B 786 ASP B 793 -1 O ALA B 788 N LEU B 607 SHEET 4 AA6 9 THR B 766 GLY B 770 -1 N VAL B 767 O ILE B 791 SHEET 5 AA6 9 LYS B 758 ALA B 762 -1 N LEU B 760 O ILE B 768 SHEET 6 AA6 9 PHE B 636 ASN B 641 -1 N TYR B 638 O ILE B 761 SHEET 7 AA6 9 ARG B 676 LEU B 680 1 O TYR B 678 N ILE B 639 SHEET 8 AA6 9 ILE B 733 LEU B 744 1 O CYS B 736 N VAL B 679 SHEET 9 AA6 9 LEU B 903 HIS B 905 -1 O VAL B 904 N GLY B 737 SHEET 1 AA7 2 TRP B 540 ARG B 541 0 SHEET 2 AA7 2 TYR B 754 ILE B 755 1 O TYR B 754 N ARG B 541 SHEET 1 AA8 2 THR B 796 MET B 801 0 SHEET 2 AA8 2 ALA B 804 GLY B 809 -1 O TYR B 806 N SER B 799 LINK CD2 LEU A 514 C3 MKA A1001 1555 1555 1.49 CISPEP 1 ARG A 374 PRO A 375 0 -1.34 CISPEP 2 HIS A 432 PRO A 433 0 -0.63 CISPEP 3 LEU A 864 PRO A 865 0 5.38 CISPEP 4 ARG B 374 PRO B 375 0 -1.62 CISPEP 5 HIS B 432 PRO B 433 0 -0.30 CISPEP 6 LEU B 864 PRO B 865 0 4.88 SITE 1 AC1 15 TRP A 364 TRP A 365 GLY A 410 ILE A 411 SITE 2 AC1 15 HIS A 442 ARG A 464 LEU A 514 ASP A 518 SITE 3 AC1 15 TRP A 519 TRP A 540 GLN A 642 GLY A 686 SITE 4 AC1 15 ASN A 773 SO4 A1007 HOH A1161 SITE 1 AC2 4 TRP A 673 CYS A 674 ASN A 802 HOH A1119 SITE 1 AC3 4 HIS A 432 ASP A 434 GLN A 435 THR A 569 SITE 1 AC4 2 GLY A 414 ARG A 431 SITE 1 AC5 4 ARG A 631 GLN A 634 ARG A 664 TRP A 673 SITE 1 AC6 4 LYS A 722 THR A 727 TRP A 729 ARG A 730 SITE 1 AC7 3 PHE A 687 ARG A 777 MKA A1001 SITE 1 AC8 4 HIS A 321 ARG A 322 PRO A 329 HOH A1129 SITE 1 AC9 4 LEU A 472 THR A 473 GLY A 742 GLU A 743 SITE 1 AD1 7 PHE A 504 LEU A 507 GLY A 508 PHE A 526 SITE 2 AD1 7 ASP A 528 ARG A 532 HOH A1115 SITE 1 AD2 4 ILE A 735 HIS A 905 LEU A 908 HOH A1120 SITE 1 AD3 5 LYS A 417 ARG A 431 LYS A 570 LYS A 572 SITE 2 AD3 5 TYR A 573 SITE 1 AD4 7 GLU A 369 VAL A 370 TYR A 371 ARG A 374 SITE 2 AD4 7 PHE A 505 LEU A 507 ASP A 510 SITE 1 AD5 16 TRP B 364 TRP B 365 GLY B 410 ILE B 411 SITE 2 AD5 16 HIS B 442 ARG B 464 LEU B 514 ASP B 518 SITE 3 AD5 16 TRP B 519 TRP B 540 GLN B 642 GLY B 686 SITE 4 AD5 16 ASN B 773 ARG B 777 ASP B 784 SO4 B1007 SITE 1 AD6 3 TRP B 673 CYS B 674 ASN B 802 SITE 1 AD7 4 THR B 727 TRP B 729 ARG B 730 HOH B1112 SITE 1 AD8 5 ARG B 471 LEU B 472 THR B 473 GLY B 742 SITE 2 AD8 5 GLU B 743 SITE 1 AD9 2 ARG A 730 ARG B 765 SITE 1 AE1 5 ARG B 739 ALA B 854 PRO B 865 VAL B 904 SITE 2 AE1 5 HIS B 905 SITE 1 AE2 4 PHE B 687 VAL B 931 TRP B 932 MKA B1001 SITE 1 AE3 3 LYS B 388 ARG B 389 HOH B1105 SITE 1 AE4 4 HIS B 321 ARG B 322 PRO B 328 HOH B1142 SITE 1 AE5 4 TRP B 729 ILE B 735 GLN B 847 HIS B 905 SITE 1 AE6 3 GLN B 634 ARG B 664 LYS B 667 SITE 1 AE7 4 LYS B 403 LYS B 417 ARG B 431 TYR B 573 SITE 1 AE8 3 MET B 725 GLY B 726 THR B 727 CRYST1 90.227 131.517 106.414 90.00 112.05 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011083 0.000000 0.004489 0.00000 SCALE2 0.000000 0.007604 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010139 0.00000