HEADER PROTEIN BINDING 08-APR-19 6OI4 TITLE RPN13 (19-132)-RPN2 (940-952) PY950-UB COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEASOMAL UBIQUITIN RECEPTOR ADRM1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 20-132; COMPND 5 SYNONYM: 110 KDA CELL MEMBRANE GLYCOPROTEIN, GP110, ADHESION- COMPND 6 REGULATING MOLECULE 1, ARM-1, PROTEASOME REGULATORY PARTICLE NON- COMPND 7 ATPASE 13, HRPN13, RPN13 HOMOLOG; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: UBIQUITIN; COMPND 11 CHAIN: C, D; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 1; COMPND 15 CHAIN: E, F; COMPND 16 FRAGMENT: UNP RESIDUES 940-952; COMPND 17 SYNONYM: 26S PROTEASOME REGULATORY SUBUNIT RPN2, 26S PROTEASOME COMPND 18 REGULATORY SUBUNIT S1, 26S PROTEASOME SUBUNIT P112, RPN2; COMPND 19 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ADRM1, GP110; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET151; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 GENE: UBC; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 18 MOL_ID: 3; SOURCE 19 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 20 ORGANISM_COMMON: HUMAN; SOURCE 21 ORGANISM_TAXID: 9606; SOURCE 22 GENE: PSMD1; SOURCE 23 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 24 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PRU, PROTEASOME, UBIQUITIN, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR C.W.HEMMIS,C.P.HILL REVDAT 5 15-NOV-23 6OI4 1 REMARK REVDAT 4 11-OCT-23 6OI4 1 REMARK REVDAT 3 01-JAN-20 6OI4 1 REMARK REVDAT 2 04-DEC-19 6OI4 1 JRNL REVDAT 1 15-MAY-19 6OI4 0 JRNL AUTH C.W.HEMMIS,S.C.HEARD,C.P.HILL JRNL TITL PHOSPHORYLATION OF TYR-950 IN THE PROTEASOME SCAFFOLDING JRNL TITL 2 PROTEIN RPN2 MODULATES ITS INTERACTION WITH THE UBIQUITIN JRNL TITL 3 RECEPTOR RPN13. JRNL REF J.BIOL.CHEM. V. 294 9659 2019 JRNL REFN ESSN 1083-351X JRNL PMID 31064842 JRNL DOI 10.1074/JBC.AC119.008881 REMARK 2 REMARK 2 RESOLUTION. 1.76 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.76 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.95 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.970 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 46327 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.207 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.350 REMARK 3 FREE R VALUE TEST SET COUNT : 2016 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.9517 - 4.2040 1.00 3170 150 0.1640 0.1830 REMARK 3 2 4.2040 - 3.3383 1.00 3215 144 0.1469 0.1616 REMARK 3 3 3.3383 - 2.9167 1.00 3184 152 0.1701 0.2179 REMARK 3 4 2.9167 - 2.6502 1.00 3195 150 0.1725 0.2178 REMARK 3 5 2.6502 - 2.4603 1.00 3202 144 0.1727 0.2327 REMARK 3 6 2.4603 - 2.3153 1.00 3172 144 0.1692 0.2007 REMARK 3 7 2.3153 - 2.1994 1.00 3185 136 0.1627 0.2065 REMARK 3 8 2.1994 - 2.1037 1.00 3201 156 0.1778 0.2143 REMARK 3 9 2.1037 - 2.0227 0.99 3162 137 0.1839 0.2728 REMARK 3 10 2.0227 - 1.9529 0.99 3200 143 0.1919 0.2484 REMARK 3 11 1.9529 - 1.8919 1.00 3181 130 0.2293 0.2681 REMARK 3 12 1.8919 - 1.8378 0.98 3163 146 0.2285 0.2535 REMARK 3 13 1.8378 - 1.7894 0.98 3096 146 0.2453 0.2817 REMARK 3 14 1.7894 - 1.7458 0.93 2985 138 0.2781 0.2632 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.130 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 3405 REMARK 3 ANGLE : 1.157 4579 REMARK 3 CHIRALITY : 0.071 491 REMARK 3 PLANARITY : 0.009 597 REMARK 3 DIHEDRAL : 20.550 1332 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6OI4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-APR-19. REMARK 100 THE DEPOSITION ID IS D_1000240743. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-DEC-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46327 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.760 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 9.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.76 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.82 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 5V1Y REMARK 200 REMARK 200 REMARK: ELONGATED NEEDLES REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M CITRIC ACID, PH 4.6, 20% REMARK 280 PEG6000, PH 4.8, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 13.90167 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 27.80333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A 89 REMARK 465 PRO A 132 REMARK 465 GLY C 76 REMARK 465 PRO E 939 REMARK 465 ASP E 952 REMARK 465 ASN B 20 REMARK 465 PRO B 89 REMARK 465 ALA B 100 REMARK 465 GLY B 101 REMARK 465 PRO B 132 REMARK 465 GLY D 76 REMARK 465 PRO F 939 REMARK 465 ILE F 951 REMARK 465 ASP F 952 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 83 CG CD CE NZ REMARK 470 LYS B 83 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HZ3 LYS D 11 OE2 GLU D 34 1.53 REMARK 500 HZ2 LYS B 30 OE1 GLU B 70 1.53 REMARK 500 HO1 EDO C 103 O HOH C 201 1.54 REMARK 500 O HOH D 201 O HOH D 222 1.68 REMARK 500 O HOH C 223 O HOH C 252 1.75 REMARK 500 O HOH C 231 O HOH C 244 1.82 REMARK 500 OE1 GLU B 118 O HOH B 201 1.89 REMARK 500 O HOH D 244 O HOH D 248 1.91 REMARK 500 O HOH D 234 O HOH D 253 1.92 REMARK 500 OD2 ASP D 32 O HOH D 201 1.92 REMARK 500 O HOH B 254 O HOH B 262 2.00 REMARK 500 O HOH D 238 O HOH D 240 2.04 REMARK 500 O HOH A 343 O HOH D 230 2.04 REMARK 500 O HOH C 235 O HOH C 239 2.07 REMARK 500 O HOH A 318 O HOH A 354 2.09 REMARK 500 OE1 GLU A 81 O HOH A 301 2.09 REMARK 500 OE2 GLU A 118 O HOH A 302 2.13 REMARK 500 O HOH D 212 O HOH D 252 2.14 REMARK 500 OE2 GLU A 81 OE2 GLU D 64 2.16 REMARK 500 OE1 GLU B 81 O HOH B 202 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 HZ3 LYS A 99 HG3 GLU B 126 1556 1.21 REMARK 500 O HOH B 256 O HOH D 244 3444 1.72 REMARK 500 OE2 GLU C 64 OE2 GLU B 81 1556 2.01 REMARK 500 O HOH C 236 O HOH C 250 3555 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 28 146.64 -170.43 REMARK 500 ALA A 28 146.64 -170.73 REMARK 500 SER A 55 -2.70 81.21 REMARK 500 ASN A 130 59.34 -170.59 REMARK 500 SER B 55 2.86 81.36 REMARK 500 ASN B 130 65.60 -154.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 LYS A 83 12.17 REMARK 500 LYS A 83 10.75 REMARK 500 ASN A 129 -11.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 104 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 105 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO D 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO D 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO F 1001 DBREF 6OI4 A 20 132 UNP Q16186 ADRM1_HUMAN 20 132 DBREF 6OI4 C 1 76 UNP P0CG48 UBC_HUMAN 1 76 DBREF 6OI4 E 940 952 UNP Q99460 PSMD1_HUMAN 940 952 DBREF 6OI4 B 20 132 UNP Q16186 ADRM1_HUMAN 20 132 DBREF 6OI4 D 1 76 UNP P0CG48 UBC_HUMAN 1 76 DBREF 6OI4 F 940 952 UNP Q99460 PSMD1_HUMAN 940 952 SEQADV 6OI4 PRO E 939 UNP Q99460 EXPRESSION TAG SEQADV 6OI4 PRO F 939 UNP Q99460 EXPRESSION TAG SEQRES 1 A 113 ASN LYS TYR LEU VAL GLU PHE ARG ALA GLY LYS MET SER SEQRES 2 A 113 LEU LYS GLY THR THR VAL THR PRO ASP LYS ARG LYS GLY SEQRES 3 A 113 LEU VAL TYR ILE GLN GLN THR ASP ASP SER LEU ILE HIS SEQRES 4 A 113 PHE CYS TRP LYS ASP ARG THR SER GLY ASN VAL GLU ASP SEQRES 5 A 113 ASP LEU ILE ILE PHE PRO ASP ASP CYS GLU PHE LYS ARG SEQRES 6 A 113 VAL PRO GLN CYS PRO SER GLY ARG VAL TYR VAL LEU LYS SEQRES 7 A 113 PHE LYS ALA GLY SER LYS ARG LEU PHE PHE TRP MET GLN SEQRES 8 A 113 GLU PRO LYS THR ASP GLN ASP GLU GLU HIS CYS ARG LYS SEQRES 9 A 113 VAL ASN GLU TYR LEU ASN ASN PRO PRO SEQRES 1 C 76 MET GLN ILE PHE VAL LYS THR LEU THR GLY LYS THR ILE SEQRES 2 C 76 THR LEU GLU VAL GLU PRO SER ASP THR ILE GLU ASN VAL SEQRES 3 C 76 LYS ALA LYS ILE GLN ASP LYS GLU GLY ILE PRO PRO ASP SEQRES 4 C 76 GLN GLN ARG LEU ILE PHE ALA GLY LYS GLN LEU GLU ASP SEQRES 5 C 76 GLY ARG THR LEU SER ASP TYR ASN ILE GLN LYS GLU SER SEQRES 6 C 76 THR LEU HIS LEU VAL LEU ARG LEU ARG GLY GLY SEQRES 1 E 14 PRO GLN GLU PRO GLU PRO PRO GLU PRO PHE GLU PTR ILE SEQRES 2 E 14 ASP SEQRES 1 B 113 ASN LYS TYR LEU VAL GLU PHE ARG ALA GLY LYS MET SER SEQRES 2 B 113 LEU LYS GLY THR THR VAL THR PRO ASP LYS ARG LYS GLY SEQRES 3 B 113 LEU VAL TYR ILE GLN GLN THR ASP ASP SER LEU ILE HIS SEQRES 4 B 113 PHE CYS TRP LYS ASP ARG THR SER GLY ASN VAL GLU ASP SEQRES 5 B 113 ASP LEU ILE ILE PHE PRO ASP ASP CYS GLU PHE LYS ARG SEQRES 6 B 113 VAL PRO GLN CYS PRO SER GLY ARG VAL TYR VAL LEU LYS SEQRES 7 B 113 PHE LYS ALA GLY SER LYS ARG LEU PHE PHE TRP MET GLN SEQRES 8 B 113 GLU PRO LYS THR ASP GLN ASP GLU GLU HIS CYS ARG LYS SEQRES 9 B 113 VAL ASN GLU TYR LEU ASN ASN PRO PRO SEQRES 1 D 76 MET GLN ILE PHE VAL LYS THR LEU THR GLY LYS THR ILE SEQRES 2 D 76 THR LEU GLU VAL GLU PRO SER ASP THR ILE GLU ASN VAL SEQRES 3 D 76 LYS ALA LYS ILE GLN ASP LYS GLU GLY ILE PRO PRO ASP SEQRES 4 D 76 GLN GLN ARG LEU ILE PHE ALA GLY LYS GLN LEU GLU ASP SEQRES 5 D 76 GLY ARG THR LEU SER ASP TYR ASN ILE GLN LYS GLU SER SEQRES 6 D 76 THR LEU HIS LEU VAL LEU ARG LEU ARG GLY GLY SEQRES 1 F 14 PRO GLN GLU PRO GLU PRO PRO GLU PRO PHE GLU PTR ILE SEQRES 2 F 14 ASP MODRES 6OI4 PTR E 950 TYR MODIFIED RESIDUE MODRES 6OI4 PTR F 950 TYR MODIFIED RESIDUE HET PTR E 950 16 HET PTR F 950 16 HET EDO A 201 10 HET EDO C 101 10 HET EDO C 102 10 HET EDO C 103 10 HET EDO C 104 10 HET EDO C 105 10 HET EDO D 101 10 HET EDO D 102 10 HET EDO F1001 10 HETNAM PTR O-PHOSPHOTYROSINE HETNAM EDO 1,2-ETHANEDIOL HETSYN PTR PHOSPHONOTYROSINE HETSYN EDO ETHYLENE GLYCOL FORMUL 3 PTR 2(C9 H12 N O6 P) FORMUL 7 EDO 9(C2 H6 O2) FORMUL 16 HOH *248(H2 O) HELIX 1 AA1 ALA A 100 SER A 102 5 3 HELIX 2 AA2 GLN A 116 ASN A 130 1 15 HELIX 3 AA3 THR C 22 GLY C 35 1 14 HELIX 4 AA4 PRO C 37 ASP C 39 5 3 HELIX 5 AA5 LEU C 56 ASN C 60 5 5 HELIX 6 AA6 GLN B 116 ASN B 130 1 15 HELIX 7 AA7 THR D 22 GLY D 35 1 14 HELIX 8 AA8 PRO D 37 ASP D 39 5 3 HELIX 9 AA9 LEU D 56 ASN D 60 5 5 SHEET 1 AA1 7 VAL A 69 ILE A 75 0 SHEET 2 AA1 7 ILE A 57 ASP A 63 -1 N PHE A 59 O LEU A 73 SHEET 3 AA1 7 GLY A 45 GLN A 51 -1 N TYR A 48 O CYS A 60 SHEET 4 AA1 7 VAL A 24 LYS A 34 -1 N PHE A 26 O VAL A 47 SHEET 5 AA1 7 ARG A 104 MET A 109 -1 O TRP A 108 N GLY A 29 SHEET 6 AA1 7 VAL A 93 PHE A 98 -1 N TYR A 94 O PHE A 107 SHEET 7 AA1 7 CYS A 80 ARG A 84 -1 N LYS A 83 O VAL A 95 SHEET 1 AA2 6 VAL A 69 ILE A 75 0 SHEET 2 AA2 6 ILE A 57 ASP A 63 -1 N PHE A 59 O LEU A 73 SHEET 3 AA2 6 GLY A 45 GLN A 51 -1 N TYR A 48 O CYS A 60 SHEET 4 AA2 6 VAL A 24 LYS A 34 -1 N PHE A 26 O VAL A 47 SHEET 5 AA2 6 THR A 37 PRO A 40 -1 O THR A 39 N SER A 32 SHEET 6 AA2 6 PHE E 948 GLU E 949 -1 O PHE E 948 N VAL A 38 SHEET 1 AA3 5 THR C 12 GLU C 16 0 SHEET 2 AA3 5 GLN C 2 THR C 7 -1 N VAL C 5 O ILE C 13 SHEET 3 AA3 5 THR C 66 LEU C 71 1 O LEU C 67 N PHE C 4 SHEET 4 AA3 5 GLN C 41 PHE C 45 -1 N ILE C 44 O HIS C 68 SHEET 5 AA3 5 LYS C 48 GLN C 49 -1 O LYS C 48 N PHE C 45 SHEET 1 AA4 7 VAL B 69 ILE B 74 0 SHEET 2 AA4 7 ILE B 57 ASP B 63 -1 N PHE B 59 O LEU B 73 SHEET 3 AA4 7 GLY B 45 GLN B 51 -1 N GLN B 50 O HIS B 58 SHEET 4 AA4 7 VAL B 24 LYS B 34 -1 N PHE B 26 O VAL B 47 SHEET 5 AA4 7 ARG B 104 MET B 109 -1 O TRP B 108 N GLY B 29 SHEET 6 AA4 7 VAL B 93 PHE B 98 -1 N TYR B 94 O PHE B 107 SHEET 7 AA4 7 CYS B 80 ARG B 84 -1 N LYS B 83 O VAL B 95 SHEET 1 AA5 6 VAL B 69 ILE B 74 0 SHEET 2 AA5 6 ILE B 57 ASP B 63 -1 N PHE B 59 O LEU B 73 SHEET 3 AA5 6 GLY B 45 GLN B 51 -1 N GLN B 50 O HIS B 58 SHEET 4 AA5 6 VAL B 24 LYS B 34 -1 N PHE B 26 O VAL B 47 SHEET 5 AA5 6 THR B 37 PRO B 40 -1 O THR B 37 N LYS B 34 SHEET 6 AA5 6 PHE F 948 GLU F 949 -1 O PHE F 948 N VAL B 38 SHEET 1 AA6 5 THR D 12 GLU D 16 0 SHEET 2 AA6 5 GLN D 2 THR D 7 -1 N VAL D 5 O ILE D 13 SHEET 3 AA6 5 THR D 66 LEU D 71 1 O LEU D 67 N PHE D 4 SHEET 4 AA6 5 GLN D 41 PHE D 45 -1 N ILE D 44 O HIS D 68 SHEET 5 AA6 5 LYS D 48 GLN D 49 -1 O LYS D 48 N PHE D 45 LINK C GLU E 949 N PTR E 950 1555 1555 1.33 LINK C PTR E 950 N ILE E 951 1555 1555 1.32 LINK C GLU F 949 N PTR F 950 1555 1555 1.33 SITE 1 AC1 5 TYR A 48 GLN A 50 HIS A 58 CYS A 60 SITE 2 AC1 5 ASP A 72 SITE 1 AC2 2 ASN C 25 ARG C 72 SITE 1 AC3 5 ASP B 78 CYS B 80 ASN B 129 LYS C 63 SITE 2 AC3 5 HOH C 225 SITE 1 AC4 7 VAL C 70 LEU C 71 LEU C 73 ARG C 74 SITE 2 AC4 7 GLY C 75 HOH C 201 HOH C 203 SITE 1 AC5 7 ASP A 54 GLN C 31 ARG C 42 VAL C 70 SITE 2 AC5 7 LEU C 71 ARG C 72 GLY C 75 SITE 1 AC6 5 ASP A 72 ILE A 74 GLY C 47 GLN C 49 SITE 2 AC6 5 HOH C 204 SITE 1 AC7 4 ASN D 25 LYS D 29 ARG D 72 HOH D 201 SITE 1 AC8 6 ASP B 54 GLN D 31 ARG D 42 VAL D 70 SITE 2 AC8 6 LEU D 71 ARG D 72 SITE 1 AC9 4 ARG B 84 PRO B 86 GLN B 87 PTR F 950 CRYST1 99.373 99.373 41.705 90.00 90.00 120.00 P 31 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010063 0.005810 0.000000 0.00000 SCALE2 0.000000 0.011620 0.000000 0.00000 SCALE3 0.000000 0.000000 0.023978 0.00000