data_6OL3 # _entry.id 6OL3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6OL3 pdb_00006ol3 10.2210/pdb6ol3/pdb WWPDB D_1000240904 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-07-03 2 'Structure model' 1 1 2019-07-10 3 'Structure model' 1 2 2019-12-25 4 'Structure model' 1 3 2024-03-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Author supporting evidence' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' pdbx_audit_support 4 4 'Structure model' chem_comp_atom 5 4 'Structure model' chem_comp_bond 6 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation.pdbx_database_id_PubMed' 5 2 'Structure model' '_citation.title' 6 2 'Structure model' '_citation_author.identifier_ORCID' 7 2 'Structure model' '_citation_author.name' 8 3 'Structure model' '_pdbx_audit_support.funding_organization' 9 4 'Structure model' '_database_2.pdbx_DOI' 10 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6OL3 _pdbx_database_status.recvd_initial_deposition_date 2019-04-15 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category RNA-Puzzles _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Hood, I.V.' 1 0000-0002-7404-8272 'Gordon, J.M.' 2 0000-0002-9081-5320 'Bou-Nader, C.' 3 0000-0003-0955-0204 'Henderson, F.V.' 4 0000-0001-8445-5819 'Bahmanjah, S.' 5 0000-0002-5343-7973 'Zhang, J.' 6 0000-0002-2114-173X # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 10 _citation.language ? _citation.page_first 2871 _citation.page_last 2871 _citation.title 'Crystal structure of an adenovirus virus-associated RNA.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-019-10752-6 _citation.pdbx_database_id_PubMed 31253805 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hood, I.V.' 1 ? primary 'Gordon, J.M.' 2 0000-0002-9081-5320 primary 'Bou-Nader, C.' 3 ? primary 'Henderson, F.E.' 4 ? primary 'Bahmanjah, S.' 5 ? primary 'Zhang, J.' 6 0000-0002-2114-173X # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'Adenovirus Virus-Associated (VA) RNA I apical and central domains' 36122.469 1 ? ? ? ? 2 non-polymer syn 'POTASSIUM ION' 39.098 1 ? ? ? ? 3 water nat water 18.015 9 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GGACCUCGCAAGGGUAUCAUGGCGGACGACCGGGGUUCGAACCCCGGAUCCGGCCGUCCGCCGUGAUCCAUGCGGUUACC GCCCGCGUGUCGAACCCAGGUGUGCGAGGUCC ; _entity_poly.pdbx_seq_one_letter_code_can ;GGACCUCGCAAGGGUAUCAUGGCGGACGACCGGGGUUCGAACCCCGGAUCCGGCCGUCCGCCGUGAUCCAUGCGGUUACC GCCCGCGUGUCGAACCCAGGUGUGCGAGGUCC ; _entity_poly.pdbx_strand_id C _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'POTASSIUM ION' K 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 A n 1 4 C n 1 5 C n 1 6 U n 1 7 C n 1 8 G n 1 9 C n 1 10 A n 1 11 A n 1 12 G n 1 13 G n 1 14 G n 1 15 U n 1 16 A n 1 17 U n 1 18 C n 1 19 A n 1 20 U n 1 21 G n 1 22 G n 1 23 C n 1 24 G n 1 25 G n 1 26 A n 1 27 C n 1 28 G n 1 29 A n 1 30 C n 1 31 C n 1 32 G n 1 33 G n 1 34 G n 1 35 G n 1 36 U n 1 37 U n 1 38 C n 1 39 G n 1 40 A n 1 41 A n 1 42 C n 1 43 C n 1 44 C n 1 45 C n 1 46 G n 1 47 G n 1 48 A n 1 49 U n 1 50 C n 1 51 C n 1 52 G n 1 53 G n 1 54 C n 1 55 C n 1 56 G n 1 57 U n 1 58 C n 1 59 C n 1 60 G n 1 61 C n 1 62 C n 1 63 G n 1 64 U n 1 65 G n 1 66 A n 1 67 U n 1 68 C n 1 69 C n 1 70 A n 1 71 U n 1 72 G n 1 73 C n 1 74 G n 1 75 G n 1 76 U n 1 77 U n 1 78 A n 1 79 C n 1 80 C n 1 81 G n 1 82 C n 1 83 C n 1 84 C n 1 85 G n 1 86 C n 1 87 G n 1 88 U n 1 89 G n 1 90 U n 1 91 C n 1 92 G n 1 93 A n 1 94 A n 1 95 C n 1 96 C n 1 97 C n 1 98 A n 1 99 G n 1 100 G n 1 101 U n 1 102 G n 1 103 U n 1 104 G n 1 105 C n 1 106 G n 1 107 A n 1 108 G n 1 109 G n 1 110 U n 1 111 C n 1 112 C n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 112 _pdbx_entity_src_syn.organism_scientific 'Human adenovirus 2' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 10515 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 26 26 G G C . n A 1 2 G 2 27 27 G G C . n A 1 3 A 3 28 28 A A C . n A 1 4 C 4 29 29 C C C . n A 1 5 C 5 30 30 C C C . n A 1 6 U 6 31 31 U U C . n A 1 7 C 7 32 32 C C C . n A 1 8 G 8 33 33 G G C . n A 1 9 C 9 34 34 C C C . n A 1 10 A 10 35 35 A A C . n A 1 11 A 11 36 36 A A C . n A 1 12 G 12 37 37 G G C . n A 1 13 G 13 38 38 G G C . n A 1 14 G 14 39 39 G G C . n A 1 15 U 15 40 40 U U C . n A 1 16 A 16 41 41 A A C . n A 1 17 U 17 42 42 U U C . n A 1 18 C 18 43 43 C C C . n A 1 19 A 19 44 44 A A C . n A 1 20 U 20 45 45 U U C . n A 1 21 G 21 46 46 G G C . n A 1 22 G 22 47 47 G G C . n A 1 23 C 23 48 48 C C C . n A 1 24 G 24 49 49 G G C . n A 1 25 G 25 50 50 G G C . n A 1 26 A 26 51 51 A A C . n A 1 27 C 27 52 52 C C C . n A 1 28 G 28 53 53 G G C . n A 1 29 A 29 54 54 A A C . n A 1 30 C 30 55 55 C C C . n A 1 31 C 31 56 56 C C C . n A 1 32 G 32 57 57 G G C . n A 1 33 G 33 58 58 G G C . n A 1 34 G 34 59 59 G G C . n A 1 35 G 35 60 ? ? ? C . n A 1 36 U 36 61 61 U U C . n A 1 37 U 37 62 62 U U C . n A 1 38 C 38 63 63 C C C . n A 1 39 G 39 64 64 G G C . n A 1 40 A 40 65 65 A A C . n A 1 41 A 41 66 66 A A C . n A 1 42 C 42 67 67 C C C . n A 1 43 C 43 68 68 C C C . n A 1 44 C 44 69 69 C C C . n A 1 45 C 45 70 70 C C C . n A 1 46 G 46 71 71 G G C . n A 1 47 G 47 72 72 G G C . n A 1 48 A 48 73 73 A A C . n A 1 49 U 49 74 74 U U C . n A 1 50 C 50 75 75 C C C . n A 1 51 C 51 76 76 C C C . n A 1 52 G 52 77 77 G G C . n A 1 53 G 53 78 78 G G C . n A 1 54 C 54 79 79 C C C . n A 1 55 C 55 80 80 C C C . n A 1 56 G 56 81 81 G G C . n A 1 57 U 57 82 82 U U C . n A 1 58 C 58 83 83 C C C . n A 1 59 C 59 84 84 C C C . n A 1 60 G 60 85 85 G G C . n A 1 61 C 61 86 86 C C C . n A 1 62 C 62 87 87 C C C . n A 1 63 G 63 88 88 G G C . n A 1 64 U 64 89 89 U U C . n A 1 65 G 65 90 90 G G C . n A 1 66 A 66 91 91 A A C . n A 1 67 U 67 92 92 U U C . n A 1 68 C 68 93 93 C C C . n A 1 69 C 69 94 94 C C C . n A 1 70 A 70 95 95 A A C . n A 1 71 U 71 96 96 U U C . n A 1 72 G 72 97 97 G G C . n A 1 73 C 73 98 98 C C C . n A 1 74 G 74 99 99 G G C . n A 1 75 G 75 100 100 G G C . n A 1 76 U 76 101 101 U U C . n A 1 77 U 77 102 102 U U C . n A 1 78 A 78 103 103 A A C . n A 1 79 C 79 104 104 C C C . n A 1 80 C 80 105 105 C C C . n A 1 81 G 81 106 106 G G C . n A 1 82 C 82 107 107 C C C . n A 1 83 C 83 108 108 C C C . n A 1 84 C 84 109 109 C C C . n A 1 85 G 85 110 110 G G C . n A 1 86 C 86 111 111 C C C . n A 1 87 G 87 112 112 G G C . n A 1 88 U 88 113 113 U U C . n A 1 89 G 89 114 114 G G C . n A 1 90 U 90 115 115 U U C . n A 1 91 C 91 116 116 C C C . n A 1 92 G 92 117 117 G G C . n A 1 93 A 93 118 118 A A C . n A 1 94 A 94 119 119 A A C . n A 1 95 C 95 120 120 C C C . n A 1 96 C 96 121 121 C C C . n A 1 97 C 97 122 122 C C C . n A 1 98 A 98 123 123 A A C . n A 1 99 G 99 124 124 G G C . n A 1 100 G 100 125 125 G G C . n A 1 101 U 101 126 126 U U C . n A 1 102 G 102 127 127 G G C . n A 1 103 U 103 128 128 U U C . n A 1 104 G 104 129 129 G G C . n A 1 105 C 105 130 130 C C C . n A 1 106 G 106 131 131 G G C . n A 1 107 A 107 132 132 A A C . n A 1 108 G 108 133 133 G G C . n A 1 109 G 109 134 134 G G C . n A 1 110 U 110 135 135 U U C . n A 1 111 C 111 136 136 C C C . n A 1 112 C 112 137 137 C C C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 K 1 201 1 K K C . C 3 HOH 1 301 1 HOH HOH C . C 3 HOH 2 302 3 HOH HOH C . C 3 HOH 3 303 31 HOH HOH C . C 3 HOH 4 304 37 HOH HOH C . C 3 HOH 5 305 25 HOH HOH C . C 3 HOH 6 306 26 HOH HOH C . C 3 HOH 7 307 14 HOH HOH C . C 3 HOH 8 308 19 HOH HOH C . C 3 HOH 9 309 35 HOH HOH C . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 C U 102 ? N1 ? A U 77 N1 2 1 Y 1 C U 102 ? C2 ? A U 77 C2 3 1 Y 1 C U 102 ? O2 ? A U 77 O2 4 1 Y 1 C U 102 ? N3 ? A U 77 N3 5 1 Y 1 C U 102 ? C4 ? A U 77 C4 6 1 Y 1 C U 102 ? O4 ? A U 77 O4 7 1 Y 1 C U 102 ? C5 ? A U 77 C5 8 1 Y 1 C U 102 ? C6 ? A U 77 C6 9 1 Y 1 C U 115 ? N1 ? A U 90 N1 10 1 Y 1 C U 115 ? C2 ? A U 90 C2 11 1 Y 1 C U 115 ? O2 ? A U 90 O2 12 1 Y 1 C U 115 ? N3 ? A U 90 N3 13 1 Y 1 C U 115 ? C4 ? A U 90 C4 14 1 Y 1 C U 115 ? O4 ? A U 90 O4 15 1 Y 1 C U 115 ? C5 ? A U 90 C5 16 1 Y 1 C U 115 ? C6 ? A U 90 C6 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.12_2829: ???)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? AutoSol ? ? ? . 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 6OL3 _cell.details ? _cell.formula_units_Z ? _cell.length_a 100.455 _cell.length_a_esd ? _cell.length_b 100.455 _cell.length_b_esd ? _cell.length_c 130.702 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6OL3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 91 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6OL3 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 4.56 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 73.05 _exptl_crystal.description 'obelisk crystals' _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;50 mM sodium cacodylate (pH 6.5) 28-30% 2-methyl-2,4-pentanediol (MPD) ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RAYONIX MX300-HS' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-08-22 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator MD2 _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.000 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.Friedel_coverage ? _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.d_resolution_high 2.74 _reflns.d_resolution_low 40.0 _reflns.data_reduction_details 'EDS server used different resolution to calculate completeness. The higher Rmerge is partly due to the higher redundancy' _reflns.data_reduction_method ? _reflns.details ? _reflns.entry_id 6OL3 _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_gt ? _reflns.number_obs 18246 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F 0.82 _reflns.observed_criterion_sigma_I ? _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rmerge_I_obs 0.152 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_chi_squared ? _reflns.pdbx_d_opt ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 12.2 _reflns.pdbx_number_measured_all ? _reflns.pdbx_ordinal 1 _reflns.pdbx_redundancy 8.2 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_scaling_rejects ? _reflns.percent_possible_obs 99.9 _reflns.phase_calculation_details ? _reflns.threshold_expression ? # _reflns_shell.d_res_high 2.74 _reflns_shell.d_res_low 2.81 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 0.82 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1310 _reflns_shell.percent_possible_all 100.0 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 3.6420 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 8.20 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 3.8840 _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.3400 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6OL3 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.740 _refine.ls_d_res_low 39.824 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 18173 _refine.ls_number_reflns_R_free 2635 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.37 _refine.ls_percent_reflns_R_free 7.89 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2188 _refine.ls_R_factor_R_free 0.2353 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2174 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.33 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 26.18 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.46 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.740 _refine_hist.d_res_low 39.824 _refine_hist.number_atoms_solvent 9 _refine_hist.number_atoms_total 2362 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 2352 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.002 ? 2625 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.410 ? 4089 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 11.886 ? 1324 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.022 ? 553 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.002 ? 109 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.7400 2.7898 . . 131 1564 94.00 . . . 0.4428 . 0.4382 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.7898 2.8435 . . 132 1563 97.00 . . . 0.4127 . 0.4300 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.8435 2.9015 . . 140 1598 100.00 . . . 0.4463 . 0.4028 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.9015 2.9646 . . 144 1639 100.00 . . . 0.3365 . 0.3609 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.9646 3.0335 . . 139 1623 100.00 . . . 0.3392 . 0.3091 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.0335 3.1093 . . 141 1617 100.00 . . . 0.2631 . 0.2542 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.1093 3.1934 . . 136 1621 100.00 . . . 0.2461 . 0.2303 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.1934 3.2873 . . 136 1642 100.00 . . . 0.2696 . 0.2153 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.2873 3.3933 . . 138 1616 100.00 . . . 0.2594 . 0.2055 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.3933 3.5146 . . 140 1626 100.00 . . . 0.2281 . 0.2357 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.5146 3.6552 . . 145 1629 100.00 . . . 0.2377 . 0.2305 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.6552 3.8214 . . 134 1620 100.00 . . . 0.2408 . 0.1796 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.8214 4.0227 . . 141 1639 100.00 . . . 0.2017 . 0.1790 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.0227 4.2745 . . 141 1601 100.00 . . . 0.2284 . 0.1964 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.2745 4.6040 . . 144 1641 100.00 . . . 0.1932 . 0.2089 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.6040 5.0665 . . 132 1631 100.00 . . . 0.2051 . 0.1855 . . . . . . . . . . 'X-RAY DIFFRACTION' 5.0665 5.7978 . . 137 1626 100.00 . . . 0.2078 . 0.1856 . . . . . . . . . . 'X-RAY DIFFRACTION' 5.7978 7.2972 . . 141 1625 100.00 . . . 0.2460 . 0.1937 . . . . . . . . . . 'X-RAY DIFFRACTION' 7.2972 39.8282 . . 143 1626 99.00 . . . 0.1805 . 0.1876 . . . . . . . . . . # _struct.entry_id 6OL3 _struct.title 'Crystal structure of an adenovirus virus-associated RNA' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6OL3 _struct_keywords.text 'noncoding RNA, viral RNA, RNA' _struct_keywords.pdbx_keywords RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 6OL3 _struct_ref.pdbx_db_accession 6OL3 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6OL3 _struct_ref_seq.pdbx_strand_id C _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 112 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 6OL3 _struct_ref_seq.db_align_beg 26 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 137 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 26 _struct_ref_seq.pdbx_auth_seq_align_end 137 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'light scattering' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A G 75 O6 ? ? ? 1_555 B K . K ? ? C G 100 C K 201 1_555 ? ? ? ? ? ? ? 3.257 ? ? metalc2 metalc ? ? A U 76 O4 ? ? ? 1_555 B K . K ? ? C U 101 C K 201 1_555 ? ? ? ? ? ? ? 3.111 ? ? hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 A C 112 N3 ? ? C G 26 C C 137 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 A C 112 O2 ? ? C G 26 C C 137 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 A C 112 N4 ? ? C G 26 C C 137 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 A C 111 N3 ? ? C G 27 C C 136 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 2 N2 ? ? ? 1_555 A C 111 O2 ? ? C G 27 C C 136 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 2 O6 ? ? ? 1_555 A C 111 N4 ? ? C G 27 C C 136 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A A 3 N1 ? ? ? 1_555 A U 110 N3 ? ? C A 28 C U 135 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A A 3 N6 ? ? ? 1_555 A U 110 O4 ? ? C A 28 C U 135 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 4 N3 ? ? ? 1_555 A G 109 N1 ? ? C C 29 C G 134 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A C 4 N4 ? ? ? 1_555 A G 109 O6 ? ? C C 29 C G 134 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A C 4 O2 ? ? ? 1_555 A G 109 N2 ? ? C C 29 C G 134 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A C 5 N3 ? ? ? 1_555 A G 108 N1 ? ? C C 30 C G 133 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A C 5 N4 ? ? ? 1_555 A G 108 O6 ? ? C C 30 C G 133 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A C 5 O2 ? ? ? 1_555 A G 108 N2 ? ? C C 30 C G 133 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A U 6 N3 ? ? ? 1_555 A A 107 N1 ? ? C U 31 C A 132 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A U 6 O4 ? ? ? 1_555 A A 107 N6 ? ? C U 31 C A 132 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A C 7 N3 ? ? ? 1_555 A G 106 N1 ? ? C C 32 C G 131 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A C 7 N4 ? ? ? 1_555 A G 106 O6 ? ? C C 32 C G 131 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A C 7 O2 ? ? ? 1_555 A G 106 N2 ? ? C C 32 C G 131 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A G 8 N1 ? ? ? 1_555 A C 105 N3 ? ? C G 33 C C 130 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A G 8 N2 ? ? ? 1_555 A C 105 O2 ? ? C G 33 C C 130 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A G 8 O6 ? ? ? 1_555 A C 105 N4 ? ? C G 33 C C 130 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A C 9 N3 ? ? ? 1_555 A G 104 N1 ? ? C C 34 C G 129 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A C 9 N4 ? ? ? 1_555 A G 104 O6 ? ? C C 34 C G 129 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A C 9 O2 ? ? ? 1_555 A G 104 N2 ? ? C C 34 C G 129 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A A 10 N1 ? ? ? 1_555 A U 103 N3 ? ? C A 35 C U 128 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A A 10 N6 ? ? ? 1_555 A U 103 O4 ? ? C A 35 C U 128 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A G 12 N1 ? ? ? 1_555 A C 97 N3 ? ? C G 37 C C 122 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A G 12 N2 ? ? ? 1_555 A C 97 O2 ? ? C G 37 C C 122 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A G 12 O6 ? ? ? 1_555 A C 97 N4 ? ? C G 37 C C 122 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A G 13 N1 ? ? ? 1_555 A C 96 N3 ? ? C G 38 C C 121 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A G 13 N2 ? ? ? 1_555 A C 96 O2 ? ? C G 38 C C 121 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A G 13 O6 ? ? ? 1_555 A C 96 N4 ? ? C G 38 C C 121 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A G 14 N1 ? ? ? 1_555 A C 95 N3 ? ? C G 39 C C 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A G 14 N2 ? ? ? 1_555 A C 95 O2 ? ? C G 39 C C 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A G 14 O6 ? ? ? 1_555 A C 95 N4 ? ? C G 39 C C 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A U 15 N3 ? ? ? 1_555 A A 94 N1 ? ? C U 40 C A 119 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A U 15 O4 ? ? ? 1_555 A A 94 N6 ? ? C U 40 C A 119 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A A 16 N1 ? ? ? 1_555 A U 67 N3 ? ? C A 41 C U 92 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A A 16 N6 ? ? ? 1_555 A U 67 O4 ? ? C A 41 C U 92 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A U 17 N3 ? ? ? 1_555 A A 66 N1 ? ? C U 42 C A 91 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A U 17 O4 ? ? ? 1_555 A A 66 N6 ? ? C U 42 C A 91 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A C 18 N3 ? ? ? 1_555 A G 65 N1 ? ? C C 43 C G 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A C 18 N4 ? ? ? 1_555 A G 65 O6 ? ? C C 43 C G 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A C 18 O2 ? ? ? 1_555 A G 65 N2 ? ? C C 43 C G 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A A 19 N1 ? ? ? 1_555 A U 64 N3 ? ? C A 44 C U 89 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A A 19 N6 ? ? ? 1_555 A U 64 O4 ? ? C A 44 C U 89 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A U 20 N3 ? ? ? 1_555 A G 63 O6 ? ? C U 45 C G 88 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog49 hydrog ? ? A U 20 O2 ? ? ? 1_555 A G 63 N1 ? ? C U 45 C G 88 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog50 hydrog ? ? A G 21 N1 ? ? ? 1_555 A C 62 N3 ? ? C G 46 C C 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A G 21 N2 ? ? ? 1_555 A C 62 O2 ? ? C G 46 C C 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A G 21 O6 ? ? ? 1_555 A C 62 N4 ? ? C G 46 C C 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A G 22 N1 ? ? ? 1_555 A C 61 N3 ? ? C G 47 C C 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? A G 22 N2 ? ? ? 1_555 A C 61 O2 ? ? C G 47 C C 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A G 22 O6 ? ? ? 1_555 A C 61 N4 ? ? C G 47 C C 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A C 23 N3 ? ? ? 1_555 A G 60 N1 ? ? C C 48 C G 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A C 23 N4 ? ? ? 1_555 A G 60 O6 ? ? C C 48 C G 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A C 23 O2 ? ? ? 1_555 A G 60 N2 ? ? C C 48 C G 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A G 24 N1 ? ? ? 1_555 A C 59 N3 ? ? C G 49 C C 84 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? A G 24 N2 ? ? ? 1_555 A C 59 O2 ? ? C G 49 C C 84 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? A G 24 O6 ? ? ? 1_555 A C 59 N4 ? ? C G 49 C C 84 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? A G 25 N1 ? ? ? 1_555 A C 58 N3 ? ? C G 50 C C 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A G 25 N2 ? ? ? 1_555 A C 58 O2 ? ? C G 50 C C 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A G 25 O6 ? ? ? 1_555 A C 58 N4 ? ? C G 50 C C 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? A A 26 N1 ? ? ? 1_555 A U 57 N3 ? ? C A 51 C U 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? A A 26 N6 ? ? ? 1_555 A U 57 O4 ? ? C A 51 C U 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? A C 27 N3 ? ? ? 1_555 A G 56 N1 ? ? C C 52 C G 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? A C 27 N4 ? ? ? 1_555 A G 56 O6 ? ? C C 52 C G 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? A C 27 O2 ? ? ? 1_555 A G 56 N2 ? ? C C 52 C G 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? A G 28 N1 ? ? ? 1_555 A C 55 N3 ? ? C G 53 C C 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? A G 28 N2 ? ? ? 1_555 A C 55 O2 ? ? C G 53 C C 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? A G 28 O6 ? ? ? 1_555 A C 55 N4 ? ? C G 53 C C 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? A A 29 N6 ? ? ? 1_555 A C 54 N3 ? ? C A 54 C C 79 1_555 ? ? ? ? ? ? 'A-C MISPAIR' ? ? ? hydrog74 hydrog ? ? A C 30 N3 ? ? ? 1_555 A G 53 N1 ? ? C C 55 C G 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? A C 30 N4 ? ? ? 1_555 A G 53 O6 ? ? C C 55 C G 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? A C 30 O2 ? ? ? 1_555 A G 53 N2 ? ? C C 55 C G 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? A C 31 N3 ? ? ? 1_555 A G 52 N1 ? ? C C 56 C G 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? A C 31 N4 ? ? ? 1_555 A G 52 O6 ? ? C C 56 C G 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? A C 31 O2 ? ? ? 1_555 A G 52 N2 ? ? C C 56 C G 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? A G 32 N1 ? ? ? 1_555 A C 51 N3 ? ? C G 57 C C 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? A G 32 N2 ? ? ? 1_555 A C 51 O2 ? ? C G 57 C C 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? A G 32 O6 ? ? ? 1_555 A C 51 N4 ? ? C G 57 C C 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? A G 33 N1 ? ? ? 1_555 A C 50 N3 ? ? C G 58 C C 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? A G 33 N2 ? ? ? 1_555 A C 50 O2 ? ? C G 58 C C 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? A G 33 O6 ? ? ? 1_555 A C 50 N4 ? ? C G 58 C C 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? A G 34 N1 ? ? ? 1_555 A U 49 O2 ? ? C G 59 C U 74 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog87 hydrog ? ? A G 34 O6 ? ? ? 1_555 A U 49 N3 ? ? C G 59 C U 74 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog88 hydrog ? ? A U 36 N3 ? ? ? 1_555 A A 48 N1 ? ? C U 61 C A 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? A U 36 O4 ? ? ? 1_555 A A 48 N6 ? ? C U 61 C A 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog90 hydrog ? ? A U 37 N3 ? ? ? 1_555 A G 47 O6 ? ? C U 62 C G 72 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog91 hydrog ? ? A U 37 O2 ? ? ? 1_555 A G 47 N1 ? ? C U 62 C G 72 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog92 hydrog ? ? A C 38 N3 ? ? ? 1_555 A G 46 N1 ? ? C C 63 C G 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? A C 38 N4 ? ? ? 1_555 A G 46 O6 ? ? C C 63 C G 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog94 hydrog ? ? A C 38 O2 ? ? ? 1_555 A G 46 N2 ? ? C C 63 C G 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog95 hydrog ? ? A G 39 N1 ? ? ? 1_555 A C 45 N3 ? ? C G 64 C C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog96 hydrog ? ? A G 39 N2 ? ? ? 1_555 A C 45 O2 ? ? C G 64 C C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog97 hydrog ? ? A G 39 O6 ? ? ? 1_555 A C 45 N4 ? ? C G 64 C C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog98 hydrog ? ? A A 41 N3 ? ? ? 1_555 A C 43 N4 ? ? C A 66 C C 68 1_555 ? ? ? ? ? ? 'A-C MISPAIR' ? ? ? hydrog99 hydrog ? ? A C 68 O2 ? ? ? 1_555 A C 95 N4 ? ? C C 93 C C 120 1_555 ? ? ? ? ? ? 'C-C MISPAIR' ? ? ? hydrog100 hydrog ? ? A C 69 N3 ? ? ? 1_555 A G 89 N1 ? ? C C 94 C G 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog101 hydrog ? ? A C 69 N4 ? ? ? 1_555 A G 89 O6 ? ? C C 94 C G 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog102 hydrog ? ? A C 69 O2 ? ? ? 1_555 A G 89 N2 ? ? C C 94 C G 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog103 hydrog ? ? A A 70 N1 ? ? ? 1_555 A U 88 N3 ? ? C A 95 C U 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog104 hydrog ? ? A A 70 N6 ? ? ? 1_555 A U 88 O4 ? ? C A 95 C U 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog105 hydrog ? ? A U 71 N3 ? ? ? 1_555 A G 87 O6 ? ? C U 96 C G 112 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog106 hydrog ? ? A U 71 O2 ? ? ? 1_555 A G 87 N1 ? ? C U 96 C G 112 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog107 hydrog ? ? A G 72 N1 ? ? ? 1_555 A C 86 N3 ? ? C G 97 C C 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog108 hydrog ? ? A G 72 N2 ? ? ? 1_555 A C 86 O2 ? ? C G 97 C C 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog109 hydrog ? ? A G 72 O6 ? ? ? 1_555 A C 86 N4 ? ? C G 97 C C 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog110 hydrog ? ? A C 73 N3 ? ? ? 1_555 A G 85 N1 ? ? C C 98 C G 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog111 hydrog ? ? A C 73 N4 ? ? ? 1_555 A G 85 O6 ? ? C C 98 C G 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog112 hydrog ? ? A C 73 O2 ? ? ? 1_555 A G 85 N2 ? ? C C 98 C G 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog113 hydrog ? ? A G 74 N1 ? ? ? 1_555 A C 84 N3 ? ? C G 99 C C 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog114 hydrog ? ? A G 74 N2 ? ? ? 1_555 A C 84 O2 ? ? C G 99 C C 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog115 hydrog ? ? A G 74 O6 ? ? ? 1_555 A C 84 N4 ? ? C G 99 C C 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog116 hydrog ? ? A G 75 N1 ? ? ? 1_555 A C 83 N3 ? ? C G 100 C C 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog117 hydrog ? ? A G 75 N2 ? ? ? 1_555 A C 83 O2 ? ? C G 100 C C 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog118 hydrog ? ? A G 75 O6 ? ? ? 1_555 A C 83 N4 ? ? C G 100 C C 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog119 hydrog ? ? A U 76 O2 ? ? ? 1_555 A C 82 N4 ? ? C U 101 C C 107 1_555 ? ? ? ? ? ? 'U-C MISPAIR' ? ? ? hydrog120 hydrog ? ? A A 78 N1 ? ? ? 1_555 A U 101 N3 ? ? C A 103 C U 126 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog121 hydrog ? ? A A 78 N6 ? ? ? 1_555 A U 101 O4 ? ? C A 103 C U 126 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog122 hydrog ? ? A C 79 N3 ? ? ? 1_555 A G 100 N1 ? ? C C 104 C G 125 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog123 hydrog ? ? A C 79 N4 ? ? ? 1_555 A G 100 O6 ? ? C C 104 C G 125 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog124 hydrog ? ? A C 79 O2 ? ? ? 1_555 A G 100 N2 ? ? C C 104 C G 125 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog125 hydrog ? ? A C 80 N3 ? ? ? 1_555 A G 99 N1 ? ? C C 105 C G 124 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog126 hydrog ? ? A C 80 N4 ? ? ? 1_555 A G 99 O6 ? ? C C 105 C G 124 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog127 hydrog ? ? A C 80 O2 ? ? ? 1_555 A G 99 N2 ? ? C C 105 C G 124 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog128 hydrog ? ? A G 81 N2 ? ? ? 1_555 A A 98 N3 ? ? C G 106 C A 123 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # _pdbx_struct_conn_angle.id 1 _pdbx_struct_conn_angle.ptnr1_label_atom_id O6 _pdbx_struct_conn_angle.ptnr1_label_alt_id ? _pdbx_struct_conn_angle.ptnr1_label_asym_id A _pdbx_struct_conn_angle.ptnr1_label_comp_id G _pdbx_struct_conn_angle.ptnr1_label_seq_id 75 _pdbx_struct_conn_angle.ptnr1_auth_atom_id ? _pdbx_struct_conn_angle.ptnr1_auth_asym_id C _pdbx_struct_conn_angle.ptnr1_auth_comp_id G _pdbx_struct_conn_angle.ptnr1_auth_seq_id 100 _pdbx_struct_conn_angle.ptnr1_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr1_symmetry 1_555 _pdbx_struct_conn_angle.ptnr2_label_atom_id K _pdbx_struct_conn_angle.ptnr2_label_alt_id ? _pdbx_struct_conn_angle.ptnr2_label_asym_id B _pdbx_struct_conn_angle.ptnr2_label_comp_id K _pdbx_struct_conn_angle.ptnr2_label_seq_id . _pdbx_struct_conn_angle.ptnr2_auth_atom_id ? _pdbx_struct_conn_angle.ptnr2_auth_asym_id C _pdbx_struct_conn_angle.ptnr2_auth_comp_id K _pdbx_struct_conn_angle.ptnr2_auth_seq_id 201 _pdbx_struct_conn_angle.ptnr2_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr2_symmetry 1_555 _pdbx_struct_conn_angle.ptnr3_label_atom_id O4 _pdbx_struct_conn_angle.ptnr3_label_alt_id ? _pdbx_struct_conn_angle.ptnr3_label_asym_id A _pdbx_struct_conn_angle.ptnr3_label_comp_id U _pdbx_struct_conn_angle.ptnr3_label_seq_id 76 _pdbx_struct_conn_angle.ptnr3_auth_atom_id ? _pdbx_struct_conn_angle.ptnr3_auth_asym_id C _pdbx_struct_conn_angle.ptnr3_auth_comp_id U _pdbx_struct_conn_angle.ptnr3_auth_seq_id 101 _pdbx_struct_conn_angle.ptnr3_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr3_symmetry 1_555 _pdbx_struct_conn_angle.value 73.5 _pdbx_struct_conn_angle.value_esd ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id C _struct_site.pdbx_auth_comp_id K _struct_site.pdbx_auth_seq_id 201 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 2 _struct_site.details 'binding site for residue K C 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 G A 75 ? G C 100 . ? 1_555 ? 2 AC1 2 U A 76 ? U C 101 . ? 1_555 ? # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined -35.9035 17.2138 -14.9106 1.5072 ? -0.0486 ? 0.0281 ? 0.8142 ? -0.1821 ? 0.6520 ? -0.0683 ? 0.3123 ? 0.1929 ? 0.1350 ? 0.0536 ? 0.0494 ? -0.1365 ? 0.1780 ? -0.3197 ? -0.4025 ? 0.3085 ? -0.4350 ? 0.5425 ? 0.0688 ? -0.1749 ? 2 'X-RAY DIFFRACTION' ? refined -34.3387 51.5364 0.9700 0.5901 ? 0.0016 ? 0.0449 ? 0.6438 ? -0.0172 ? 0.2473 ? 0.9691 ? 0.1703 ? -0.0417 ? 0.6416 ? 0.0613 ? 4.2358 ? 0.1649 ? 0.1190 ? 0.0336 ? -0.2103 ? 0.0222 ? -0.1130 ? 0.1085 ? 0.5585 ? -0.1604 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? ? ? ? ? ? ? ? ;chain 'C' and (resid 26 through 87 ) ; 2 'X-RAY DIFFRACTION' 2 ? ? ? ? ? ? ? ? ? ;chain 'C' and (resid 88 through 137 ) ; # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id C _pdbx_unobs_or_zero_occ_residues.auth_comp_id G _pdbx_unobs_or_zero_occ_residues.auth_seq_id 60 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id G _pdbx_unobs_or_zero_occ_residues.label_seq_id 35 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 G OP3 O N N 73 G P P N N 74 G OP1 O N N 75 G OP2 O N N 76 G "O5'" O N N 77 G "C5'" C N N 78 G "C4'" C N R 79 G "O4'" O N N 80 G "C3'" C N S 81 G "O3'" O N N 82 G "C2'" C N R 83 G "O2'" O N N 84 G "C1'" C N R 85 G N9 N Y N 86 G C8 C Y N 87 G N7 N Y N 88 G C5 C Y N 89 G C6 C N N 90 G O6 O N N 91 G N1 N N N 92 G C2 C N N 93 G N2 N N N 94 G N3 N N N 95 G C4 C Y N 96 G HOP3 H N N 97 G HOP2 H N N 98 G "H5'" H N N 99 G "H5''" H N N 100 G "H4'" H N N 101 G "H3'" H N N 102 G "HO3'" H N N 103 G "H2'" H N N 104 G "HO2'" H N N 105 G "H1'" H N N 106 G H8 H N N 107 G H1 H N N 108 G H21 H N N 109 G H22 H N N 110 HOH O O N N 111 HOH H1 H N N 112 HOH H2 H N N 113 K K K N N 114 U OP3 O N N 115 U P P N N 116 U OP1 O N N 117 U OP2 O N N 118 U "O5'" O N N 119 U "C5'" C N N 120 U "C4'" C N R 121 U "O4'" O N N 122 U "C3'" C N S 123 U "O3'" O N N 124 U "C2'" C N R 125 U "O2'" O N N 126 U "C1'" C N R 127 U N1 N N N 128 U C2 C N N 129 U O2 O N N 130 U N3 N N N 131 U C4 C N N 132 U O4 O N N 133 U C5 C N N 134 U C6 C N N 135 U HOP3 H N N 136 U HOP2 H N N 137 U "H5'" H N N 138 U "H5''" H N N 139 U "H4'" H N N 140 U "H3'" H N N 141 U "HO3'" H N N 142 U "H2'" H N N 143 U "HO2'" H N N 144 U "H1'" H N N 145 U H3 H N N 146 U H5 H N N 147 U H6 H N N 148 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 G OP3 P sing N N 76 G OP3 HOP3 sing N N 77 G P OP1 doub N N 78 G P OP2 sing N N 79 G P "O5'" sing N N 80 G OP2 HOP2 sing N N 81 G "O5'" "C5'" sing N N 82 G "C5'" "C4'" sing N N 83 G "C5'" "H5'" sing N N 84 G "C5'" "H5''" sing N N 85 G "C4'" "O4'" sing N N 86 G "C4'" "C3'" sing N N 87 G "C4'" "H4'" sing N N 88 G "O4'" "C1'" sing N N 89 G "C3'" "O3'" sing N N 90 G "C3'" "C2'" sing N N 91 G "C3'" "H3'" sing N N 92 G "O3'" "HO3'" sing N N 93 G "C2'" "O2'" sing N N 94 G "C2'" "C1'" sing N N 95 G "C2'" "H2'" sing N N 96 G "O2'" "HO2'" sing N N 97 G "C1'" N9 sing N N 98 G "C1'" "H1'" sing N N 99 G N9 C8 sing Y N 100 G N9 C4 sing Y N 101 G C8 N7 doub Y N 102 G C8 H8 sing N N 103 G N7 C5 sing Y N 104 G C5 C6 sing N N 105 G C5 C4 doub Y N 106 G C6 O6 doub N N 107 G C6 N1 sing N N 108 G N1 C2 sing N N 109 G N1 H1 sing N N 110 G C2 N2 sing N N 111 G C2 N3 doub N N 112 G N2 H21 sing N N 113 G N2 H22 sing N N 114 G N3 C4 sing N N 115 HOH O H1 sing N N 116 HOH O H2 sing N N 117 U OP3 P sing N N 118 U OP3 HOP3 sing N N 119 U P OP1 doub N N 120 U P OP2 sing N N 121 U P "O5'" sing N N 122 U OP2 HOP2 sing N N 123 U "O5'" "C5'" sing N N 124 U "C5'" "C4'" sing N N 125 U "C5'" "H5'" sing N N 126 U "C5'" "H5''" sing N N 127 U "C4'" "O4'" sing N N 128 U "C4'" "C3'" sing N N 129 U "C4'" "H4'" sing N N 130 U "O4'" "C1'" sing N N 131 U "C3'" "O3'" sing N N 132 U "C3'" "C2'" sing N N 133 U "C3'" "H3'" sing N N 134 U "O3'" "HO3'" sing N N 135 U "C2'" "O2'" sing N N 136 U "C2'" "C1'" sing N N 137 U "C2'" "H2'" sing N N 138 U "O2'" "HO2'" sing N N 139 U "C1'" N1 sing N N 140 U "C1'" "H1'" sing N N 141 U N1 C2 sing N N 142 U N1 C6 sing N N 143 U C2 O2 doub N N 144 U C2 N3 sing N N 145 U N3 C4 sing N N 146 U N3 H3 sing N N 147 U C4 O4 doub N N 148 U C4 C5 sing N N 149 U C5 C6 doub N N 150 U C5 H5 sing N N 151 U C6 H6 sing N N 152 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 6OL3 'double helix' 6OL3 'a-form double helix' 6OL3 'hairpin loop' 6OL3 'bulge loop' 6OL3 'mismatched base pair' 6OL3 'three-way junction' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 A C 112 1_555 -0.601 -0.238 0.005 -9.441 -12.808 -11.334 1 C_G26:C137_C C 26 ? C 137 ? 19 1 1 A G 2 1_555 A C 111 1_555 -0.580 -0.158 0.230 -4.286 -10.708 -0.730 2 C_G27:C136_C C 27 ? C 136 ? 19 1 1 A A 3 1_555 A U 110 1_555 0.362 -0.293 0.349 8.007 -11.239 -12.550 3 C_A28:U135_C C 28 ? C 135 ? 20 1 1 A C 4 1_555 A G 109 1_555 0.164 -0.117 0.076 11.117 -17.536 -2.305 4 C_C29:G134_C C 29 ? C 134 ? 19 1 1 A C 5 1_555 A G 108 1_555 -0.145 -0.198 0.170 3.455 -8.461 -5.903 5 C_C30:G133_C C 30 ? C 133 ? 19 1 1 A U 6 1_555 A A 107 1_555 -0.038 -0.039 -0.070 -1.140 -19.963 0.368 6 C_U31:A132_C C 31 ? C 132 ? 20 1 1 A C 7 1_555 A G 106 1_555 -0.072 -0.095 0.106 0.243 -8.931 0.951 7 C_C32:G131_C C 32 ? C 131 ? 19 1 1 A G 8 1_555 A C 105 1_555 -0.029 -0.239 -0.155 -2.390 -12.683 -2.585 8 C_G33:C130_C C 33 ? C 130 ? 19 1 1 A C 9 1_555 A G 104 1_555 0.439 -0.153 -0.020 7.265 -12.921 1.676 9 C_C34:G129_C C 34 ? C 129 ? 19 1 1 A A 10 1_555 A U 103 1_555 0.213 0.080 0.187 -12.773 -19.682 -2.305 10 C_A35:U128_C C 35 ? C 128 ? 20 1 1 A A 41 1_555 A C 43 1_555 4.558 -1.967 0.931 -23.921 4.809 -46.573 11 C_A66:C68_C C 66 ? C 68 ? ? ? 1 A G 39 1_555 A C 45 1_555 -0.077 -0.231 0.158 3.328 -1.940 -4.483 12 C_G64:C70_C C 64 ? C 70 ? 19 1 1 A C 38 1_555 A G 46 1_555 0.108 0.083 -0.222 -1.350 -7.392 -4.355 13 C_C63:G71_C C 63 ? C 71 ? 19 1 1 A U 37 1_555 A G 47 1_555 1.452 -0.274 0.055 -3.405 -8.140 0.253 14 C_U62:G72_C C 62 ? C 72 ? 28 1 1 A U 36 1_555 A A 48 1_555 0.133 -0.024 -0.166 -2.069 -11.027 3.017 15 C_U61:A73_C C 61 ? C 73 ? 20 1 1 A G 34 1_555 A U 49 1_555 -2.027 -0.477 -0.783 0.562 0.108 -10.237 16 C_G59:U74_C C 59 ? C 74 ? 28 1 1 A G 33 1_555 A C 50 1_555 -0.028 -0.169 -0.030 -3.833 -3.657 -6.634 17 C_G58:C75_C C 58 ? C 75 ? 19 1 1 A G 32 1_555 A C 51 1_555 1.067 0.294 -0.523 -6.963 -4.175 -0.380 18 C_G57:C76_C C 57 ? C 76 ? 19 1 1 A C 31 1_555 A G 52 1_555 -0.114 -0.017 -0.261 8.984 -12.600 1.587 19 C_C56:G77_C C 56 ? C 77 ? 19 1 1 A C 30 1_555 A G 53 1_555 -0.074 -0.092 0.127 11.638 -10.163 0.879 20 C_C55:G78_C C 55 ? C 78 ? 19 1 1 A A 29 1_555 A C 54 1_555 -1.937 -0.290 0.234 5.595 -8.252 5.652 21 C_A54:C79_C C 54 ? C 79 ? ? 1 1 A G 28 1_555 A C 55 1_555 -0.225 -0.092 -0.536 -6.152 -6.273 -0.067 22 C_G53:C80_C C 53 ? C 80 ? 19 1 1 A C 27 1_555 A G 56 1_555 0.398 0.104 0.292 -2.155 -6.735 4.415 23 C_C52:G81_C C 52 ? C 81 ? 19 1 1 A A 26 1_555 A U 57 1_555 -0.003 -0.124 0.437 3.865 -0.310 -11.132 24 C_A51:U82_C C 51 ? C 82 ? 20 1 1 A G 25 1_555 A C 58 1_555 0.106 -0.023 -0.283 -7.020 -10.401 -7.920 25 C_G50:C83_C C 50 ? C 83 ? 19 1 1 A G 24 1_555 A C 59 1_555 -0.253 0.090 -0.055 -4.180 -5.316 2.108 26 C_G49:C84_C C 49 ? C 84 ? 19 1 1 A C 23 1_555 A G 60 1_555 0.268 -0.055 0.138 2.117 -9.161 2.636 27 C_C48:G85_C C 48 ? C 85 ? 19 1 1 A G 22 1_555 A C 61 1_555 0.127 -0.221 -0.084 2.313 -8.935 -3.836 28 C_G47:C86_C C 47 ? C 86 ? 19 1 1 A G 21 1_555 A C 62 1_555 0.068 0.067 0.208 9.071 -5.973 -1.578 29 C_G46:C87_C C 46 ? C 87 ? 19 1 1 A U 20 1_555 A G 63 1_555 2.258 -0.540 -0.126 3.931 -16.725 3.295 30 C_U45:G88_C C 45 ? C 88 ? 28 1 1 A A 19 1_555 A U 64 1_555 0.164 -0.043 -0.141 5.157 -12.087 4.929 31 C_A44:U89_C C 44 ? C 89 ? 20 1 1 A C 18 1_555 A G 65 1_555 0.002 -0.098 -0.291 7.496 -13.144 2.928 32 C_C43:G90_C C 43 ? C 90 ? 19 1 1 A U 17 1_555 A A 66 1_555 -0.152 -0.131 0.127 -8.891 -15.522 2.506 33 C_U42:A91_C C 42 ? C 91 ? 20 1 1 A A 16 1_555 A U 67 1_555 -0.457 0.072 -0.367 -24.061 -9.803 0.926 34 C_A41:U92_C C 41 ? C 92 ? 20 1 1 A U 15 1_555 A A 94 1_555 0.060 -0.302 0.018 4.800 -7.430 0.114 35 C_U40:A119_C C 40 ? C 119 ? 20 1 1 A G 14 1_555 A C 95 1_555 -0.034 -0.174 -0.235 -4.888 -3.049 2.244 36 C_G39:C120_C C 39 ? C 120 ? 19 1 1 A G 13 1_555 A C 96 1_555 -0.204 -0.027 -0.112 -8.046 4.850 6.068 37 C_G38:C121_C C 38 ? C 121 ? 19 1 1 A G 12 1_555 A C 97 1_555 -0.250 -0.040 -0.810 -14.883 -11.107 4.473 38 C_G37:C122_C C 37 ? C 122 ? 19 1 1 A G 81 1_555 A A 98 1_555 -2.974 -6.803 1.895 -57.922 5.195 -156.823 39 C_G106:A123_C C 106 ? C 123 ? ? 12 1 A C 69 1_555 A G 89 1_555 0.086 -0.182 0.007 4.564 -12.539 -0.334 40 C_C94:G114_C C 94 ? C 114 ? 19 1 1 A A 70 1_555 A U 88 1_555 -0.194 -0.206 0.020 3.002 -15.459 4.987 41 C_A95:U113_C C 95 ? C 113 ? 20 1 1 A U 71 1_555 A G 87 1_555 2.682 -0.570 -0.028 5.490 -16.059 2.706 42 C_U96:G112_C C 96 ? C 112 ? 28 1 1 A G 72 1_555 A C 86 1_555 0.002 -0.114 -0.051 -1.281 -6.675 -1.546 43 C_G97:C111_C C 97 ? C 111 ? 19 1 1 A C 73 1_555 A G 85 1_555 0.080 -0.088 -0.203 5.687 -7.215 -0.165 44 C_C98:G110_C C 98 ? C 110 ? 19 1 1 A G 74 1_555 A C 84 1_555 -0.050 -0.169 -0.075 -4.353 -5.148 0.772 45 C_G99:C109_C C 99 ? C 109 ? 19 1 1 A G 75 1_555 A C 83 1_555 -0.141 -0.187 -0.315 -13.771 -17.895 1.417 46 C_G100:C108_C C 100 ? C 108 ? 19 1 1 A U 76 1_555 A C 82 1_555 4.530 -1.086 -0.239 -10.361 -6.524 -3.972 47 C_U101:C107_C C 101 ? C 107 ? ? ? 1 A A 78 1_555 A U 101 1_555 -0.809 -0.323 -0.599 -1.662 -0.079 -4.084 48 C_A103:U126_C C 103 ? C 126 ? 20 1 1 A C 79 1_555 A G 100 1_555 -0.216 -0.158 -0.367 6.078 -3.804 0.599 49 C_C104:G125_C C 104 ? C 125 ? 19 1 1 A C 80 1_555 A G 99 1_555 0.193 -0.148 -0.572 9.711 3.616 -6.638 50 C_C105:G124_C C 105 ? C 124 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 A C 112 1_555 A G 2 1_555 A C 111 1_555 0.329 -1.711 2.973 -3.053 7.560 35.754 -3.606 -0.881 2.536 12.119 4.894 36.643 1 CC_G26G27:C136C137_CC C 26 ? C 137 ? C 27 ? C 136 ? 1 A G 2 1_555 A C 111 1_555 A A 3 1_555 A U 110 1_555 -0.739 -1.458 2.770 -4.446 7.280 37.620 -2.947 0.668 2.523 11.115 6.788 38.541 2 CC_G27A28:U135C136_CC C 27 ? C 136 ? C 28 ? C 135 ? 1 A A 3 1_555 A U 110 1_555 A C 4 1_555 A G 109 1_555 0.547 -1.656 3.088 2.197 6.106 30.649 -4.107 -0.639 2.747 11.392 -4.098 31.312 3 CC_A28C29:G134U135_CC C 28 ? C 135 ? C 29 ? C 134 ? 1 A C 4 1_555 A G 109 1_555 A C 5 1_555 A G 108 1_555 -0.938 -2.238 3.323 -5.508 6.938 30.174 -5.390 0.734 2.873 12.981 10.305 31.418 4 CC_C29C30:G133G134_CC C 29 ? C 134 ? C 30 ? C 133 ? 1 A C 5 1_555 A G 108 1_555 A U 6 1_555 A A 107 1_555 0.338 -1.352 3.224 3.042 11.743 35.243 -3.567 -0.155 2.673 18.724 -4.850 37.210 5 CC_C30U31:A132G133_CC C 30 ? C 133 ? C 31 ? C 132 ? 1 A U 6 1_555 A A 107 1_555 A C 7 1_555 A G 106 1_555 0.044 -1.332 3.188 -0.437 6.276 34.233 -3.126 -0.137 2.904 10.551 0.734 34.790 6 CC_U31C32:G131A132_CC C 31 ? C 132 ? C 32 ? C 131 ? 1 A C 7 1_555 A G 106 1_555 A G 8 1_555 A C 105 1_555 -0.218 -1.460 3.305 1.490 9.253 30.404 -4.269 0.655 2.740 17.139 -2.760 31.783 7 CC_C32G33:C130G131_CC C 32 ? C 131 ? C 33 ? C 130 ? 1 A G 8 1_555 A C 105 1_555 A C 9 1_555 A G 104 1_555 0.584 -1.608 2.979 0.304 1.008 34.392 -2.861 -0.945 2.937 1.704 -0.513 34.408 8 CC_G33C34:G129C130_CC C 33 ? C 130 ? C 34 ? C 129 ? 1 A C 9 1_555 A G 104 1_555 A A 10 1_555 A U 103 1_555 0.269 -1.894 3.667 3.442 8.492 32.716 -4.682 0.121 3.104 14.719 -5.967 33.941 9 CC_C34A35:U128G129_CC C 34 ? C 129 ? C 35 ? C 128 ? 1 A A 41 1_555 A C 43 1_555 A G 39 1_555 A C 45 1_555 -4.819 4.980 -2.326 87.260 141.183 -135.369 -2.066 -2.676 -2.796 -71.034 43.904 -174.685 10 CC_A66G64:C70C68_CC C 66 ? C 68 ? C 64 ? C 70 ? 1 A G 39 1_555 A C 45 1_555 A C 38 1_555 A G 46 1_555 -0.457 1.998 -3.144 0.085 -10.097 -25.746 -6.270 -0.975 -2.215 21.629 0.183 -27.624 11 CC_G64C63:G71C70_CC C 64 ? C 70 ? C 63 ? C 71 ? 1 A C 38 1_555 A G 46 1_555 A U 37 1_555 A G 47 1_555 0.058 1.895 -3.048 -5.726 -9.439 -28.699 -5.140 1.058 -2.272 18.213 -11.049 -30.708 12 CC_C63U62:G72G71_CC C 63 ? C 71 ? C 62 ? C 72 ? 1 A U 37 1_555 A G 47 1_555 A U 36 1_555 A A 48 1_555 0.061 1.418 -3.339 -0.743 -4.671 -34.980 -3.025 0.210 -3.127 7.727 -1.230 -35.288 13 CC_U62U61:A73G72_CC C 62 ? C 72 ? C 61 ? C 73 ? 1 A U 36 1_555 A A 48 1_555 A G 34 1_555 A U 49 1_555 0.771 1.190 -3.346 6.785 -1.521 -52.338 -1.441 0.414 -3.381 1.716 7.654 -52.766 14 CC_U61G59:U74A73_CC C 61 ? C 73 ? C 59 ? C 74 ? 1 A G 34 1_555 A U 49 1_555 A G 33 1_555 A C 50 1_555 0.539 2.059 -3.086 -1.255 -13.026 -29.344 -5.632 1.158 -1.991 24.250 -2.337 -32.071 15 CC_G59G58:C75U74_CC C 59 ? C 74 ? C 58 ? C 75 ? 1 A G 33 1_555 A C 50 1_555 A G 32 1_555 A C 51 1_555 0.824 2.478 -3.106 3.299 -7.902 -25.037 -7.208 1.054 -2.316 17.585 7.341 -26.439 16 CC_G58G57:C76C75_CC C 58 ? C 75 ? C 57 ? C 76 ? 1 A G 32 1_555 A C 51 1_555 A C 31 1_555 A G 52 1_555 0.353 1.639 -3.628 -2.180 -16.118 -39.346 -3.930 0.712 -2.758 22.793 -3.083 -42.451 17 CC_G57C56:G77C76_CC C 57 ? C 76 ? C 56 ? C 77 ? 1 A C 31 1_555 A G 52 1_555 A C 30 1_555 A G 53 1_555 -0.300 1.927 -3.102 -4.043 -8.495 -31.027 -4.771 0.088 -2.518 15.441 -7.349 -32.388 18 CC_C56C55:G78G77_CC C 56 ? C 77 ? C 55 ? C 78 ? 1 A C 30 1_555 A G 53 1_555 A A 29 1_555 A C 54 1_555 0.204 1.325 -3.088 0.811 -3.322 -38.389 -2.390 0.217 -2.971 5.040 1.230 -38.535 19 CC_C55A54:C79G78_CC C 55 ? C 78 ? C 54 ? C 79 ? 1 A A 29 1_555 A C 54 1_555 A G 28 1_555 A C 55 1_555 -0.329 1.611 -2.716 8.148 -9.270 -26.240 -4.734 -1.987 -1.869 19.130 16.814 -28.951 20 CC_A54G53:C80C79_CC C 54 ? C 79 ? C 53 ? C 80 ? 1 A G 28 1_555 A C 55 1_555 A C 27 1_555 A G 56 1_555 0.356 1.672 -3.281 -4.307 -10.308 -25.321 -5.752 1.686 -2.342 22.188 -9.271 -27.639 21 CC_G53C52:G81C80_CC C 53 ? C 80 ? C 52 ? C 81 ? 1 A C 27 1_555 A G 56 1_555 A A 26 1_555 A U 57 1_555 -0.993 1.881 -3.366 -2.543 -13.690 -38.177 -4.160 -1.164 -2.626 20.132 -3.739 -40.548 22 CC_C52A51:U82G81_CC C 52 ? C 81 ? C 51 ? C 82 ? 1 A A 26 1_555 A U 57 1_555 A G 25 1_555 A C 58 1_555 0.130 1.739 -2.760 5.492 -7.369 -30.013 -4.308 -0.573 -2.267 13.827 10.306 -31.357 23 CC_A51G50:C83U82_CC C 51 ? C 82 ? C 50 ? C 83 ? 1 A G 25 1_555 A C 58 1_555 A G 24 1_555 A C 59 1_555 0.331 1.863 -3.302 -3.631 -8.183 -34.563 -4.157 1.036 -2.756 13.495 -5.987 -35.669 24 CC_G50G49:C84C83_CC C 50 ? C 83 ? C 49 ? C 84 ? 1 A G 24 1_555 A C 59 1_555 A C 23 1_555 A G 60 1_555 0.009 1.962 -3.199 -2.288 -8.340 -28.363 -5.413 0.449 -2.523 16.541 -4.537 -29.626 25 CC_G49C48:G85C84_CC C 49 ? C 84 ? C 48 ? C 85 ? 1 A C 23 1_555 A G 60 1_555 A G 22 1_555 A C 61 1_555 -0.664 1.672 -3.195 0.725 -5.571 -33.078 -3.752 -1.262 -2.868 9.697 1.261 -33.539 26 CC_C48G47:C86G85_CC C 48 ? C 85 ? C 47 ? C 86 ? 1 A G 22 1_555 A C 61 1_555 A G 21 1_555 A C 62 1_555 -0.230 1.694 -3.395 -1.184 -9.518 -34.374 -4.110 -0.208 -2.846 15.730 -1.956 -35.648 27 CC_G47G46:C87C86_CC C 47 ? C 86 ? C 46 ? C 87 ? 1 A G 21 1_555 A C 62 1_555 A U 20 1_555 A G 63 1_555 1.565 2.172 -3.012 3.704 -12.087 -18.939 -8.883 2.936 -1.623 32.462 9.947 -22.739 28 CC_G46U45:G88C87_CC C 46 ? C 87 ? C 45 ? C 88 ? 1 A U 20 1_555 A G 63 1_555 A A 19 1_555 A U 64 1_555 -0.229 1.259 -3.262 -3.028 -12.736 -38.756 -3.128 -0.014 -2.742 18.558 -4.413 -40.827 29 CC_U45A44:U89G88_CC C 45 ? C 88 ? C 44 ? C 89 ? 1 A A 19 1_555 A U 64 1_555 A C 18 1_555 A G 65 1_555 -0.136 1.442 -3.331 0.760 -14.357 -28.505 -5.033 -0.376 -2.348 27.088 1.433 -31.858 30 CC_A44C43:G90U89_CC C 44 ? C 89 ? C 43 ? C 90 ? 1 A C 18 1_555 A G 65 1_555 A U 17 1_555 A A 66 1_555 -0.025 1.095 -2.870 -0.863 -5.856 -32.149 -2.806 0.083 -2.635 10.463 -1.542 -32.675 31 CC_C43U42:A91G90_CC C 43 ? C 90 ? C 42 ? C 91 ? 1 A U 17 1_555 A A 66 1_555 A A 16 1_555 A U 67 1_555 0.493 0.974 -2.910 6.293 -9.427 -31.024 -3.099 -0.055 -2.562 16.932 11.303 -32.982 32 CC_U42A41:U92A91_CC C 42 ? C 91 ? C 41 ? C 92 ? 1 A A 16 1_555 A U 67 1_555 A U 15 1_555 A A 94 1_555 -0.838 1.910 -3.746 -6.261 -12.018 -37.090 -4.370 -0.442 -3.100 18.166 -9.464 -39.406 33 CC_A41U40:A119U92_CC C 41 ? C 92 ? C 40 ? C 119 ? 1 A U 15 1_555 A A 94 1_555 A G 14 1_555 A C 95 1_555 -0.901 2.575 -2.887 0.462 -5.672 -26.504 -6.641 -2.017 -2.280 12.194 0.993 -27.097 34 CC_U40G39:C120A119_CC C 40 ? C 119 ? C 39 ? C 120 ? 1 A G 14 1_555 A C 95 1_555 A G 13 1_555 A C 96 1_555 -0.015 1.861 -3.136 -2.351 -9.098 -30.613 -4.823 0.347 -2.488 16.742 -4.327 -31.990 35 CC_G39G38:C121C120_CC C 39 ? C 120 ? C 38 ? C 121 ? 1 A G 13 1_555 A C 96 1_555 A G 12 1_555 A C 97 1_555 0.305 2.003 -3.017 7.037 -4.117 -28.992 -4.610 -0.698 -2.710 8.026 13.718 -30.093 36 CC_G38G37:C122C121_CC C 38 ? C 121 ? C 37 ? C 122 ? 1 A G 12 1_555 A C 97 1_555 A G 81 1_555 A A 98 1_555 3.722 -4.815 -3.485 119.325 43.294 77.751 -2.208 -2.975 -0.954 24.762 -68.248 139.300 37 CC_G37G106:A123C122_CC C 37 ? C 122 ? C 106 ? C 123 ? 1 A C 69 1_555 A G 89 1_555 A A 70 1_555 A U 88 1_555 0.016 -1.519 3.178 -2.314 12.503 29.923 -4.657 -0.388 2.363 22.954 4.248 32.456 38 CC_C94A95:U113G114_CC C 94 ? C 114 ? C 95 ? C 113 ? 1 A A 70 1_555 A U 88 1_555 A U 71 1_555 A G 87 1_555 0.040 -1.329 3.104 1.330 6.112 44.284 -2.263 0.059 2.905 8.060 -1.754 44.702 39 CC_A95U96:G112U113_CC C 95 ? C 113 ? C 96 ? C 112 ? 1 A U 71 1_555 A G 87 1_555 A G 72 1_555 A C 86 1_555 -0.999 -2.293 3.245 -0.508 12.613 20.928 -8.598 2.235 1.637 31.316 1.261 24.404 40 CC_U96G97:C111G112_CC C 96 ? C 112 ? C 97 ? C 111 ? 1 A G 72 1_555 A C 86 1_555 A C 73 1_555 A G 85 1_555 -0.044 -1.499 3.103 0.992 6.850 31.109 -3.856 0.244 2.717 12.578 -1.822 31.851 41 CC_G97C98:G110C111_CC C 97 ? C 111 ? C 98 ? C 110 ? 1 A C 73 1_555 A G 85 1_555 A G 74 1_555 A C 84 1_555 0.176 -1.808 3.266 -1.608 14.113 29.752 -5.312 -0.553 2.195 25.721 2.931 32.900 42 CC_C98G99:C109G110_CC C 98 ? C 110 ? C 99 ? C 109 ? 1 A G 74 1_555 A C 84 1_555 A G 75 1_555 A C 83 1_555 0.171 -1.933 3.445 3.159 12.893 33.366 -4.904 0.155 2.553 21.431 -5.250 35.840 43 CC_G99G100:C108C109_CC C 99 ? C 109 ? C 100 ? C 108 ? 1 A G 75 1_555 A C 83 1_555 A U 76 1_555 A C 82 1_555 -0.026 -1.015 3.430 4.660 11.300 48.628 -2.032 0.373 3.121 13.476 -5.558 50.050 44 CC_G100U101:C107C108_CC C 100 ? C 108 ? C 101 ? C 107 ? 1 A A 78 1_555 A U 101 1_555 A C 79 1_555 A G 100 1_555 -0.533 -1.985 3.062 -5.899 5.073 35.953 -3.776 0.115 2.815 8.103 9.421 36.758 45 CC_A103C104:G125U126_CC C 103 ? C 126 ? C 104 ? C 125 ? 1 A C 79 1_555 A G 100 1_555 A C 80 1_555 A G 99 1_555 -0.624 -2.082 3.210 -1.566 8.714 30.949 -5.163 0.875 2.572 15.925 2.863 32.161 46 CC_C104C105:G124G125_CC C 104 ? C 125 ? C 105 ? C 124 ? # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of Diabetes and Digestive and Kidney Disease (NIH/NIDDK)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number 'ZIA DK075136-03' _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 6OL3 _atom_sites.fract_transf_matrix[1][1] 0.009955 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009955 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007651 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H K N O P # loop_