HEADER HYDROLASE 24-APR-19 6OP6 TITLE STRUCTURE OF VIM-20 IN THE REDUCED STATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: METALLO-BETA-LACTAMASE VIM-20; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTER CLOACAE; SOURCE 3 ORGANISM_TAXID: 550; SOURCE 4 GENE: BLAVIM-20; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS METALLO-BETA-LACTAMASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR R.C.PAGE,B.A.SHURINA,J.S.MONTGOMERY,M.G.ORISCHAK,J.C.NIX REVDAT 4 11-OCT-23 6OP6 1 LINK REVDAT 3 01-JAN-20 6OP6 1 REMARK REVDAT 2 04-DEC-19 6OP6 1 JRNL REVDAT 1 23-OCT-19 6OP6 0 JRNL AUTH Z.CHENG,B.A.SHURINA,C.R.BETHEL,P.W.THOMAS,S.H.MARSHALL, JRNL AUTH 2 C.A.THOMAS,K.YANG,R.L.KIMBLE,J.S.MONTGOMERY,M.G.ORISCHAK, JRNL AUTH 3 C.M.MILLER,J.L.TENNENBAUM,J.C.NIX,D.L.TIERNEY,W.FAST, JRNL AUTH 4 R.A.BONOMO,R.C.PAGE,M.W.CROWDER JRNL TITL A SINGLE SALT BRIDGE IN VIM-20 INCREASES PROTEIN STABILITY JRNL TITL 2 AND ANTIBIOTIC RESISTANCE UNDER LOW-ZINC CONDITIONS. JRNL REF MBIO V. 10 2019 JRNL REFN ESSN 2150-7511 JRNL PMID 31744917 JRNL DOI 10.1128/MBIO.02412-19 REMARK 2 REMARK 2 RESOLUTION. 1.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.14_3260: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.35 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 100324 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.550 REMARK 3 FREE R VALUE TEST SET COUNT : 3565 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.3660 - 3.6541 0.99 3878 150 0.1374 0.1895 REMARK 3 2 3.6541 - 2.9007 1.00 3859 148 0.1508 0.1894 REMARK 3 3 2.9007 - 2.5341 1.00 3913 148 0.1748 0.1882 REMARK 3 4 2.5341 - 2.3024 1.00 3903 126 0.1703 0.1885 REMARK 3 5 2.3024 - 2.1374 1.00 3902 147 0.1706 0.1942 REMARK 3 6 2.1374 - 2.0114 1.00 3868 152 0.1710 0.1733 REMARK 3 7 2.0114 - 1.9107 1.00 3859 142 0.1844 0.1790 REMARK 3 8 1.9107 - 1.8275 1.00 3925 140 0.1854 0.1912 REMARK 3 9 1.8275 - 1.7571 1.00 3872 154 0.1913 0.2059 REMARK 3 10 1.7571 - 1.6965 1.00 3867 146 0.1994 0.2423 REMARK 3 11 1.6965 - 1.6435 1.00 3924 154 0.1947 0.2382 REMARK 3 12 1.6435 - 1.5965 1.00 3909 147 0.2028 0.1973 REMARK 3 13 1.5965 - 1.5544 1.00 3902 129 0.2082 0.2595 REMARK 3 14 1.5544 - 1.5165 1.00 3857 150 0.2132 0.2233 REMARK 3 15 1.5165 - 1.4820 1.00 3906 139 0.2279 0.2486 REMARK 3 16 1.4820 - 1.4505 1.00 3890 131 0.2365 0.2369 REMARK 3 17 1.4505 - 1.4215 1.00 3858 153 0.2449 0.2953 REMARK 3 18 1.4215 - 1.3947 1.00 3889 137 0.2657 0.3055 REMARK 3 19 1.3947 - 1.3698 1.00 3856 132 0.2700 0.2567 REMARK 3 20 1.3698 - 1.3465 1.00 3920 135 0.2844 0.2963 REMARK 3 21 1.3465 - 1.3248 1.00 3935 146 0.3028 0.3112 REMARK 3 22 1.3248 - 1.3044 0.98 3730 137 0.3247 0.3280 REMARK 3 23 1.3044 - 1.2852 0.99 3818 158 0.3295 0.3315 REMARK 3 24 1.2852 - 1.2671 0.96 3813 133 0.3387 0.3549 REMARK 3 25 1.2671 - 1.2500 0.95 3706 131 0.3503 0.3713 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.270 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 1834 REMARK 3 ANGLE : 0.791 2518 REMARK 3 CHIRALITY : 0.077 290 REMARK 3 PLANARITY : 0.004 335 REMARK 3 DIHEDRAL : 3.051 1015 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 32 THROUGH 44 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.0918 -33.4333 -2.7999 REMARK 3 T TENSOR REMARK 3 T11: 0.2782 T22: 0.1508 REMARK 3 T33: 0.2174 T12: 0.0251 REMARK 3 T13: -0.0383 T23: 0.0700 REMARK 3 L TENSOR REMARK 3 L11: 3.7729 L22: 4.9904 REMARK 3 L33: 4.3197 L12: 0.9798 REMARK 3 L13: 1.4779 L23: 0.2165 REMARK 3 S TENSOR REMARK 3 S11: 0.1528 S12: -0.3531 S13: -0.6689 REMARK 3 S21: 0.2924 S22: 0.2003 S23: 0.0625 REMARK 3 S31: 0.3517 S32: 0.1425 S33: -0.1796 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 45 THROUGH 88 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.6666 -28.0218 -9.9596 REMARK 3 T TENSOR REMARK 3 T11: 0.1578 T22: 0.0895 REMARK 3 T33: 0.1137 T12: -0.0151 REMARK 3 T13: -0.0093 T23: 0.0203 REMARK 3 L TENSOR REMARK 3 L11: 2.6722 L22: 2.5157 REMARK 3 L33: 4.3213 L12: -1.1968 REMARK 3 L13: 1.5542 L23: -0.9455 REMARK 3 S TENSOR REMARK 3 S11: -0.0118 S12: -0.1474 S13: -0.1980 REMARK 3 S21: 0.1073 S22: 0.1198 S23: 0.0133 REMARK 3 S31: 0.1162 S32: -0.2373 S33: -0.0768 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 89 THROUGH 102 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.0121 -35.7546 -15.3072 REMARK 3 T TENSOR REMARK 3 T11: 0.2648 T22: 0.0862 REMARK 3 T33: 0.1952 T12: 0.0020 REMARK 3 T13: -0.0618 T23: -0.0030 REMARK 3 L TENSOR REMARK 3 L11: 7.2391 L22: 6.5624 REMARK 3 L33: 2.3581 L12: 2.5675 REMARK 3 L13: -1.7427 L23: -0.8100 REMARK 3 S TENSOR REMARK 3 S11: -0.0169 S12: -0.0069 S13: -0.4273 REMARK 3 S21: 0.0390 S22: 0.1338 S23: 0.1320 REMARK 3 S31: 0.5396 S32: -0.0482 S33: -0.0771 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 103 THROUGH 199 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.1527 -17.3230 -17.4659 REMARK 3 T TENSOR REMARK 3 T11: 0.1100 T22: 0.0880 REMARK 3 T33: 0.0763 T12: 0.0121 REMARK 3 T13: -0.0030 T23: 0.0135 REMARK 3 L TENSOR REMARK 3 L11: 1.4626 L22: 1.8945 REMARK 3 L33: 2.4313 L12: 0.0284 REMARK 3 L13: 0.4293 L23: 0.5716 REMARK 3 S TENSOR REMARK 3 S11: 0.0203 S12: 0.0094 S13: 0.0314 REMARK 3 S21: -0.0925 S22: 0.0183 S23: 0.0221 REMARK 3 S31: -0.0561 S32: -0.1397 S33: -0.0466 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 200 THROUGH 215 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.7223 -13.5750 -1.2212 REMARK 3 T TENSOR REMARK 3 T11: 0.2366 T22: 0.1695 REMARK 3 T33: 0.1613 T12: 0.0089 REMARK 3 T13: -0.0128 T23: -0.0173 REMARK 3 L TENSOR REMARK 3 L11: 1.9217 L22: 6.7042 REMARK 3 L33: 8.4740 L12: 3.4170 REMARK 3 L13: -3.4619 L23: -7.2710 REMARK 3 S TENSOR REMARK 3 S11: 0.0328 S12: -0.2335 S13: -0.0927 REMARK 3 S21: 0.2436 S22: -0.3054 S23: -0.4820 REMARK 3 S31: -0.1543 S32: 0.5008 S33: 0.2301 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 216 THROUGH 266 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.8669 -11.6030 0.5469 REMARK 3 T TENSOR REMARK 3 T11: 0.1713 T22: 0.1779 REMARK 3 T33: 0.0876 T12: 0.0275 REMARK 3 T13: 0.0248 T23: -0.0175 REMARK 3 L TENSOR REMARK 3 L11: 2.2467 L22: 2.4373 REMARK 3 L33: 3.5657 L12: 0.6358 REMARK 3 L13: -0.0137 L23: 0.6122 REMARK 3 S TENSOR REMARK 3 S11: 0.1151 S12: -0.1447 S13: 0.1090 REMARK 3 S21: 0.1657 S22: -0.1713 S23: 0.0913 REMARK 3 S31: -0.1564 S32: -0.4610 S33: 0.0444 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6OP6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-APR-19. REMARK 100 THE DEPOSITION ID IS D_1000241091. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-MAR-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 4.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CMOS REMARK 200 DETECTOR MANUFACTURER : RDI CMOS_8M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 360182 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.250 REMARK 200 RESOLUTION RANGE LOW (A) : 39.350 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.26 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 6.60 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4NQ2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 34.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.87 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MAGNESIUM CHLORIDE AND 20 % REMARK 280 (W/V) PEG 3350, PH 7.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 32.23000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 37.12800 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 39.34650 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 32.23000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 37.12800 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 39.34650 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 32.23000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 37.12800 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 39.34650 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 32.23000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 37.12800 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 39.34650 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 419 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 24 REMARK 465 HIS A 25 REMARK 465 MET A 26 REMARK 465 VAL A 27 REMARK 465 ASP A 28 REMARK 465 SER A 29 REMARK 465 SER A 30 REMARK 465 GLY A 31 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 90 CG CD CE NZ REMARK 470 ARG A 262 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 84 146.57 74.07 REMARK 500 TRP A 87 67.75 70.86 REMARK 500 ALA A 178 -105.73 -150.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 114 NE2 REMARK 620 2 HIS A 116 ND1 96.7 REMARK 620 3 HIS A 179 NE2 102.8 108.0 REMARK 620 4 HOH A 527 O 117.1 121.6 108.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 302 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 118 OD2 REMARK 620 2 CYS A 198 SG 104.9 REMARK 620 3 HIS A 240 NE2 89.8 101.7 REMARK 620 4 HOH A 517 O 150.4 104.6 82.9 REMARK 620 5 HOH A 527 O 90.3 113.1 143.9 79.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 303 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 153 NE2 REMARK 620 2 HIS A 251 ND1 48.8 REMARK 620 3 GLU A 266 OE2 47.6 1.6 REMARK 620 4 HOH A 574 O 47.6 3.8 4.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 304 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 434 O REMARK 620 2 HOH A 444 O 83.8 REMARK 620 3 HOH A 450 O 85.8 92.0 REMARK 620 4 HOH A 461 O 90.6 81.2 172.6 REMARK 620 5 HOH A 484 O 98.9 174.3 83.2 103.8 REMARK 620 6 HOH A 498 O 165.2 81.5 95.8 86.1 95.9 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 304 DBREF1 6OP6 A 27 266 UNP A0A344X7M2_ENTCL DBREF2 6OP6 A A0A344X7M2 27 266 SEQADV 6OP6 GLY A 24 UNP A0A344X7M EXPRESSION TAG SEQADV 6OP6 HIS A 25 UNP A0A344X7M EXPRESSION TAG SEQADV 6OP6 MET A 26 UNP A0A344X7M EXPRESSION TAG SEQRES 1 A 243 GLY HIS MET VAL ASP SER SER GLY GLU TYR PRO THR VAL SEQRES 2 A 243 SER GLU ILE PRO VAL GLY GLU VAL ARG LEU TYR GLN ILE SEQRES 3 A 243 ALA ASP GLY VAL TRP SER HIS ILE ALA THR GLN SER PHE SEQRES 4 A 243 ASP GLY ALA VAL TYR PRO SER ASN GLY LEU ILE VAL ARG SEQRES 5 A 243 ASP GLY ASP GLU LEU LEU LEU ILE ASP THR ALA TRP GLY SEQRES 6 A 243 ALA LYS ASN THR ALA ALA LEU LEU ALA GLU ILE GLU LYS SEQRES 7 A 243 GLN ILE GLY LEU PRO VAL THR ARG ALA VAL SER THR HIS SEQRES 8 A 243 PHE HIS ASP ASP ARG VAL GLY GLY VAL ASP VAL LEU ARG SEQRES 9 A 243 ALA ALA GLY VAL ALA THR TYR ALA SER PRO SER THR ARG SEQRES 10 A 243 ARG LEU ALA GLU VAL GLU GLY ASN GLU ILE PRO THR HIS SEQRES 11 A 243 SER LEU GLU GLY LEU SER SER SER GLY ASP ALA VAL ARG SEQRES 12 A 243 PHE GLY PRO VAL GLU LEU PHE TYR PRO GLY ALA ALA HIS SEQRES 13 A 243 SER THR ASP ASN LEU VAL VAL TYR VAL PRO SER ALA SER SEQRES 14 A 243 VAL LEU TYR GLY GLY CYS ALA ILE TYR GLU LEU SER ARG SEQRES 15 A 243 THR SER ALA GLY ASN VAL ALA ASP ALA ASP LEU ALA GLU SEQRES 16 A 243 TRP PRO THR SER ILE GLU ARG ILE GLN GLN ARG TYR PRO SEQRES 17 A 243 GLU ALA GLN PHE VAL ILE PRO GLY HIS GLY LEU PRO GLY SEQRES 18 A 243 GLY LEU ASP LEU LEU LYS HIS THR THR ASN VAL VAL LYS SEQRES 19 A 243 ALA HIS THR ASN ARG SER VAL VAL GLU HET ZN A 301 1 HET ZN A 302 1 HET ZN A 303 1 HET NA A 304 1 HETNAM ZN ZINC ION HETNAM NA SODIUM ION FORMUL 2 ZN 3(ZN 2+) FORMUL 5 NA NA 1+ FORMUL 6 HOH *196(H2 O) HELIX 1 AA1 THR A 35 ILE A 39 5 5 HELIX 2 AA2 GLY A 88 ILE A 103 1 16 HELIX 3 AA3 HIS A 116 GLY A 121 1 6 HELIX 4 AA4 GLY A 122 ALA A 129 1 8 HELIX 5 AA5 SER A 136 GLY A 147 1 12 HELIX 6 AA6 CYS A 198 ILE A 200 5 3 HELIX 7 AA7 GLU A 218 TYR A 230 1 13 HELIX 8 AA8 LEU A 246 ASN A 261 1 16 SHEET 1 AA1 7 ARG A 45 ALA A 50 0 SHEET 2 AA1 7 VAL A 53 PHE A 62 -1 O ILE A 57 N ARG A 45 SHEET 3 AA1 7 ALA A 65 ASP A 76 -1 O ILE A 73 N TRP A 54 SHEET 4 AA1 7 GLU A 79 ILE A 83 -1 O GLU A 79 N ASP A 76 SHEET 5 AA1 7 VAL A 107 VAL A 111 1 O ARG A 109 N LEU A 82 SHEET 6 AA1 7 ALA A 132 ALA A 135 1 O TYR A 134 N ALA A 110 SHEET 7 AA1 7 HIS A 153 SER A 154 1 O HIS A 153 N THR A 133 SHEET 1 AA2 5 ALA A 164 PHE A 167 0 SHEET 2 AA2 5 VAL A 170 PHE A 173 -1 O LEU A 172 N VAL A 165 SHEET 3 AA2 5 VAL A 185 VAL A 188 -1 O TYR A 187 N GLU A 171 SHEET 4 AA2 5 VAL A 193 GLY A 197 -1 O TYR A 195 N VAL A 186 SHEET 5 AA2 5 PHE A 235 PRO A 238 1 O PHE A 235 N LEU A 194 LINK NE2 HIS A 114 ZN ZN A 301 1555 1555 2.07 LINK ND1 HIS A 116 ZN ZN A 301 1555 1555 2.02 LINK OD2 ASP A 118 ZN ZN A 302 1555 1555 2.07 LINK NE2 HIS A 153 ZN ZN A 303 1555 6444 2.04 LINK NE2 HIS A 179 ZN ZN A 301 1555 1555 2.01 LINK SG CYS A 198 ZN ZN A 302 1555 1555 2.34 LINK NE2 HIS A 240 ZN ZN A 302 1555 1555 2.15 LINK ND1 HIS A 251 ZN ZN A 303 1555 1555 2.04 LINK OE2 GLU A 266 ZN ZN A 303 1555 1555 2.03 LINK ZN ZN A 301 O HOH A 527 1555 1555 2.00 LINK ZN ZN A 302 O HOH A 517 1555 1555 2.18 LINK ZN ZN A 302 O HOH A 527 1555 1555 2.00 LINK ZN ZN A 303 O HOH A 574 1555 1555 2.22 LINK NA NA A 304 O HOH A 434 1555 1555 2.18 LINK NA NA A 304 O HOH A 444 1555 6444 2.29 LINK NA NA A 304 O HOH A 450 1555 6444 2.36 LINK NA NA A 304 O HOH A 461 1555 1555 2.33 LINK NA NA A 304 O HOH A 484 1555 1555 2.51 LINK NA NA A 304 O HOH A 498 1555 8444 2.28 SITE 1 AC1 5 HIS A 114 HIS A 116 HIS A 179 ZN A 302 SITE 2 AC1 5 HOH A 527 SITE 1 AC2 6 ASP A 118 CYS A 198 HIS A 240 ZN A 301 SITE 2 AC2 6 HOH A 517 HOH A 527 SITE 1 AC3 4 HIS A 153 HIS A 251 GLU A 266 HOH A 574 SITE 1 AC4 6 HOH A 434 HOH A 444 HOH A 450 HOH A 461 SITE 2 AC4 6 HOH A 484 HOH A 498 CRYST1 64.460 74.256 78.693 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015513 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013467 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012708 0.00000