HEADER TRANSCRIPTION 29-APR-19 6OQY TITLE HUMAN LRH-1 BOUND TO THE AGONIST 6N AND A FRAGMENT OF THE TIF2 TITLE 2 COREGULATOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEAR RECEPTOR SUBFAMILY 5 GROUP A MEMBER 2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 299-541; COMPND 5 SYNONYM: ALPHA-1-FETOPROTEIN TRANSCRIPTION FACTOR,B1-BINDING FACTOR, COMPND 6 HB1F,CYP7A PROMOTER-BINDING FACTOR,HEPATOCYTIC TRANSCRIPTION FACTOR, COMPND 7 LIVER RECEPTOR HOMOLOG 1,LRH-1; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: NUCLEAR RECEPTOR COACTIVATOR 2; COMPND 11 CHAIN: C; COMPND 12 SYNONYM: NCOA-2,CLASS E BASIC HELIX-LOOP-HELIX PROTEIN 75,BHLHE75, COMPND 13 TRANSCRIPTIONAL INTERMEDIARY FACTOR 2,HTIF2; COMPND 14 ENGINEERED: YES; COMPND 15 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NR5A2, B1F, CPF, FTF; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606 KEYWDS NUCLEAR HORMONE RECEPTOR, AGONIST, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR S.G.MAYS,E.A.ORTLUND REVDAT 4 11-OCT-23 6OQY 1 REMARK REVDAT 3 08-JAN-20 6OQY 1 JRNL REVDAT 2 25-DEC-19 6OQY 1 REMARK REVDAT 1 28-AUG-19 6OQY 0 JRNL AUTH S.G.MAYS,A.R.FLYNN,J.L.CORNELISON,C.D.OKAFOR,H.WANG,G.WANG, JRNL AUTH 2 X.HUANG,H.N.DONALDSON,E.J.MILLINGS,R.POLAVARAPU,D.D.MOORE, JRNL AUTH 3 J.W.CALVERT,N.T.JUI,E.A.ORTLUND JRNL TITL DEVELOPMENT OF THE FIRST LOW NANOMOLAR LIVER RECEPTOR JRNL TITL 2 HOMOLOG-1 AGONIST THROUGH STRUCTURE-GUIDED DESIGN. JRNL REF J.MED.CHEM. V. 62 11022 2019 JRNL REFN ISSN 0022-2623 JRNL PMID 31419141 JRNL DOI 10.1021/ACS.JMEDCHEM.9B00753 REMARK 2 REMARK 2 RESOLUTION. 2.23 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.23 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.27 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 3 NUMBER OF REFLECTIONS : 12206 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.232 REMARK 3 R VALUE (WORKING SET) : 0.230 REMARK 3 FREE R VALUE : 0.269 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 608 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.2802 - 3.5399 0.95 3034 158 0.2075 0.2506 REMARK 3 2 3.5399 - 2.8100 1.00 2973 157 0.2494 0.2756 REMARK 3 3 2.8100 - 2.4548 1.00 2912 153 0.2479 0.2958 REMARK 3 4 2.4548 - 2.2304 0.92 2679 140 0.3212 0.3459 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.350 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.460 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 2095 REMARK 3 ANGLE : 0.470 2833 REMARK 3 CHIRALITY : 0.033 319 REMARK 3 PLANARITY : 0.002 359 REMARK 3 DIHEDRAL : 12.796 1267 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 300 THROUGH 314 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.4159 50.2493 17.4462 REMARK 3 T TENSOR REMARK 3 T11: 0.5728 T22: 0.5198 REMARK 3 T33: 0.5434 T12: -0.0479 REMARK 3 T13: -0.1289 T23: 0.0427 REMARK 3 L TENSOR REMARK 3 L11: 4.4794 L22: 4.4993 REMARK 3 L33: 4.0606 L12: -0.6028 REMARK 3 L13: -0.5033 L23: -1.1503 REMARK 3 S TENSOR REMARK 3 S11: 0.3928 S12: -0.6698 S13: 0.2309 REMARK 3 S21: 1.5956 S22: -0.1629 S23: -0.2918 REMARK 3 S31: -0.4020 S32: 0.5058 S33: 0.0495 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 315 THROUGH 370 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.8315 32.2922 23.3043 REMARK 3 T TENSOR REMARK 3 T11: 0.6370 T22: 0.5587 REMARK 3 T33: 0.4549 T12: 0.0458 REMARK 3 T13: 0.0928 T23: 0.0835 REMARK 3 L TENSOR REMARK 3 L11: 3.9800 L22: 2.8676 REMARK 3 L33: 3.4712 L12: -0.5320 REMARK 3 L13: 0.1170 L23: -1.2538 REMARK 3 S TENSOR REMARK 3 S11: -0.3226 S12: -0.6790 S13: -0.5990 REMARK 3 S21: 0.7270 S22: 0.4597 S23: 0.3457 REMARK 3 S31: 0.4986 S32: -0.1135 S33: -0.0252 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 371 THROUGH 397 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.5731 38.2155 12.3287 REMARK 3 T TENSOR REMARK 3 T11: 0.3912 T22: 0.3847 REMARK 3 T33: 0.3652 T12: 0.0023 REMARK 3 T13: -0.0118 T23: 0.0474 REMARK 3 L TENSOR REMARK 3 L11: 4.6234 L22: 4.1226 REMARK 3 L33: 3.2055 L12: -1.4847 REMARK 3 L13: -1.3816 L23: 0.2936 REMARK 3 S TENSOR REMARK 3 S11: 0.2618 S12: 0.2511 S13: -0.3934 REMARK 3 S21: -0.0315 S22: -0.1151 S23: 0.2214 REMARK 3 S31: -0.1152 S32: -0.0408 S33: -0.0242 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 398 THROUGH 494 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.6514 37.8665 7.7576 REMARK 3 T TENSOR REMARK 3 T11: 0.2977 T22: 0.3580 REMARK 3 T33: 0.3353 T12: 0.0772 REMARK 3 T13: -0.0573 T23: 0.0433 REMARK 3 L TENSOR REMARK 3 L11: 2.6662 L22: 3.6550 REMARK 3 L33: 3.3347 L12: 0.0943 REMARK 3 L13: -1.0186 L23: -0.5245 REMARK 3 S TENSOR REMARK 3 S11: 0.1096 S12: 0.0604 S13: -0.1859 REMARK 3 S21: -0.0133 S22: -0.1582 S23: -0.2733 REMARK 3 S31: 0.1360 S32: -0.0671 S33: 0.1098 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 495 THROUGH 523 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.2085 32.4648 3.6244 REMARK 3 T TENSOR REMARK 3 T11: 0.4630 T22: 0.5485 REMARK 3 T33: 0.3636 T12: 0.0250 REMARK 3 T13: 0.0108 T23: -0.0955 REMARK 3 L TENSOR REMARK 3 L11: 3.9273 L22: 3.7186 REMARK 3 L33: 3.0688 L12: 1.8185 REMARK 3 L13: -1.1572 L23: -1.2542 REMARK 3 S TENSOR REMARK 3 S11: 0.1779 S12: 0.3374 S13: 0.2034 REMARK 3 S21: -0.0130 S22: -0.2043 S23: 0.4372 REMARK 3 S31: 0.0741 S32: -0.4889 S33: 0.1060 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 524 THROUGH 538 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.4146 28.8072 15.7819 REMARK 3 T TENSOR REMARK 3 T11: 0.6854 T22: 0.7805 REMARK 3 T33: 0.8599 T12: -0.2719 REMARK 3 T13: -0.1028 T23: 0.0152 REMARK 3 L TENSOR REMARK 3 L11: 4.5530 L22: 2.9369 REMARK 3 L33: 8.3288 L12: 0.5118 REMARK 3 L13: -1.8189 L23: 4.4619 REMARK 3 S TENSOR REMARK 3 S11: 0.2137 S12: -0.9442 S13: 0.6174 REMARK 3 S21: -0.1300 S22: -0.3888 S23: 3.3692 REMARK 3 S31: 0.7691 S32: -0.9780 S33: 0.1301 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 742 THROUGH 752 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.5274 42.7723 23.1212 REMARK 3 T TENSOR REMARK 3 T11: 0.5451 T22: 0.4913 REMARK 3 T33: 0.5396 T12: 0.0305 REMARK 3 T13: 0.2514 T23: 0.0457 REMARK 3 L TENSOR REMARK 3 L11: 6.4957 L22: 3.9255 REMARK 3 L33: 4.6898 L12: 2.0934 REMARK 3 L13: 0.9828 L23: 1.5790 REMARK 3 S TENSOR REMARK 3 S11: 0.9311 S12: 0.3372 S13: 0.4412 REMARK 3 S21: 1.1637 S22: 0.2280 S23: -0.1346 REMARK 3 S31: -0.7099 S32: -0.6418 S33: -0.8063 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6OQY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-APR-19. REMARK 100 THE DEPOSITION ID IS D_1000241199. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-MAR-18 REMARK 200 TEMPERATURE (KELVIN) : 73 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12206 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.230 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 200 DATA REDUNDANCY : 16.60 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.23 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.31 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5L11 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.97 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM ACETATE (PH 4.6), PEG4000, REMARK 280 GLYCEROL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 108.97800 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 23.34150 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 23.34150 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 163.46700 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 23.34150 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 23.34150 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 54.48900 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 23.34150 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 23.34150 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 163.46700 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 23.34150 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 23.34150 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 54.48900 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 108.97800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12290 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 723 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 297 REMARK 465 ASN A 298 REMARK 465 ALA A 299 REMARK 465 LYS A 338 REMARK 465 LEU A 339 REMARK 465 LYS A 539 REMARK 465 ARG A 540 REMARK 465 ALA A 541 REMARK 465 LYS C 740 REMARK 465 GLU C 741 REMARK 465 ASP C 753 REMARK 465 THR C 754 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP A 389 HH22 ARG A 393 1.58 REMARK 500 OH TYR A 516 O HOH A 701 2.09 REMARK 500 OD2 ASP A 389 NH2 ARG A 393 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 ND1 HIS A 303 OD2 ASP A 412 1565 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 365 -57.55 73.41 REMARK 500 ASN A 529 -2.88 72.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue N2J A 601 DBREF 6OQY A 299 541 UNP O00482 NR5A2_HUMAN 299 541 DBREF 6OQY C 740 754 UNP Q15596 NCOA2_HUMAN 740 754 SEQADV 6OQY SER A 297 UNP O00482 EXPRESSION TAG SEQADV 6OQY ASN A 298 UNP O00482 EXPRESSION TAG SEQRES 1 A 245 SER ASN ALA SER ILE PRO HIS LEU ILE LEU GLU LEU LEU SEQRES 2 A 245 LYS CYS GLU PRO ASP GLU PRO GLN VAL GLN ALA LYS ILE SEQRES 3 A 245 MET ALA TYR LEU GLN GLN GLU GLN ALA ASN ARG SER LYS SEQRES 4 A 245 HIS GLU LYS LEU SER THR PHE GLY LEU MET CYS LYS MET SEQRES 5 A 245 ALA ASP GLN THR LEU PHE SER ILE VAL GLU TRP ALA ARG SEQRES 6 A 245 SER SER ILE PHE PHE ARG GLU LEU LYS VAL ASP ASP GLN SEQRES 7 A 245 MET LYS LEU LEU GLN ASN CYS TRP SER GLU LEU LEU ILE SEQRES 8 A 245 LEU ASP HIS ILE TYR ARG GLN VAL VAL HIS GLY LYS GLU SEQRES 9 A 245 GLY SER ILE PHE LEU VAL THR GLY GLN GLN VAL ASP TYR SEQRES 10 A 245 SER ILE ILE ALA SER GLN ALA GLY ALA THR LEU ASN ASN SEQRES 11 A 245 LEU MET SER HIS ALA GLN GLU LEU VAL ALA LYS LEU ARG SEQRES 12 A 245 SER LEU GLN PHE ASP GLN ARG GLU PHE VAL CYS LEU LYS SEQRES 13 A 245 PHE LEU VAL LEU PHE SER LEU ASP VAL LYS ASN LEU GLU SEQRES 14 A 245 ASN PHE GLN LEU VAL GLU GLY VAL GLN GLU GLN VAL ASN SEQRES 15 A 245 ALA ALA LEU LEU ASP TYR THR MET CYS ASN TYR PRO GLN SEQRES 16 A 245 GLN THR GLU LYS PHE GLY GLN LEU LEU LEU ARG LEU PRO SEQRES 17 A 245 GLU ILE ARG ALA ILE SER MET GLN ALA GLU GLU TYR LEU SEQRES 18 A 245 TYR TYR LYS HIS LEU ASN GLY ASP VAL PRO TYR ASN ASN SEQRES 19 A 245 LEU LEU ILE GLU MET LEU HIS ALA LYS ARG ALA SEQRES 1 C 15 LYS GLU ASN ALA LEU LEU ARG TYR LEU LEU ASP LYS ASP SEQRES 2 C 15 ASP THR HET N2J A 601 69 HETNAM N2J N-[(1S,3AR,6AR)-5-HEXYL-4-PHENYL-3A-(1-PHENYLETHENYL)- HETNAM 2 N2J 1,2,3,3A,6,6A-HEXAHYDROPENTALEN-1-YL]SULFURIC DIAMIDE FORMUL 3 N2J C28 H36 N2 O2 S FORMUL 4 HOH *23(H2 O) HELIX 1 AA1 PRO A 302 LYS A 310 1 9 HELIX 2 AA2 ASP A 314 ASN A 332 1 19 HELIX 3 AA3 THR A 341 SER A 362 1 22 HELIX 4 AA4 PHE A 365 LEU A 369 5 5 HELIX 5 AA5 LYS A 370 GLY A 398 1 29 HELIX 6 AA6 TYR A 413 GLY A 421 1 9 HELIX 7 AA7 GLY A 421 LEU A 441 1 21 HELIX 8 AA8 ASP A 444 PHE A 457 1 14 HELIX 9 AA9 ASN A 466 TYR A 489 1 24 HELIX 10 AB1 GLU A 494 LEU A 501 1 8 HELIX 11 AB2 LEU A 501 GLY A 524 1 24 HELIX 12 AB3 ASN A 530 ALA A 538 1 9 HELIX 13 AB4 ALA C 743 LYS C 751 1 9 SHEET 1 AA1 2 SER A 402 PHE A 404 0 SHEET 2 AA1 2 GLN A 410 ASP A 412 -1 O VAL A 411 N ILE A 403 SITE 1 AC1 12 PHE A 342 MET A 345 CYS A 346 MET A 348 SITE 2 AC1 12 ALA A 349 HIS A 390 LEU A 405 VAL A 406 SITE 3 AC1 12 ILE A 416 LEU A 427 MET A 428 LEU A 517 CRYST1 46.683 46.683 217.956 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021421 0.000000 0.000000 0.00000 SCALE2 0.000000 0.021421 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004588 0.00000