HEADER CHAPERONE 12-MAY-19 6OWZ TITLE SPY H96L:IM7 L19PI-PHE COMPLEX; MULTIPLE ANOMALOUS DATASETS CONTAINED TITLE 2 HEREIN FOR ELEMENT IDENTIFICATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: PERIPLASMIC CHAPERONE SPY; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: SPHEROPLAST PROTEIN Y; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PERIPLASMIC, CHAPERONE EXPDTA X-RAY DIFFRACTION AUTHOR S.ROCCHIO,R.DUMAN,K.EL OMARI,V.MYKHAYLYK,Z.YAN,A.WAGNER, AUTHOR 2 J.C.A.BARDWELL,S.HOROWITZ REVDAT 6 11-OCT-23 6OWZ 1 LINK REVDAT 5 11-DEC-19 6OWZ 1 JRNL REVDAT 4 20-NOV-19 6OWZ 1 REMARK REVDAT 3 09-OCT-19 6OWZ 1 REMARK LINK SITE CRYST1 REVDAT 3 2 1 ATOM REVDAT 2 05-JUN-19 6OWZ 1 AUTHOR JRNL REVDAT 1 29-MAY-19 6OWZ 0 JRNL AUTH S.ROCCHIO,R.DUMAN,K.EL OMARI,V.MYKHAYLYK,C.ORR,Z.YAN, JRNL AUTH 2 L.SALMON,A.WAGNER,J.C.A.BARDWELL,S.HOROWITZ JRNL TITL IDENTIFYING DYNAMIC, PARTIALLY OCCUPIED RESIDUES USING JRNL TITL 2 ANOMALOUS SCATTERING. JRNL REF ACTA CRYSTALLOGR D STRUCT V. 75 1084 2019 JRNL REF 2 BIOL JRNL REFN ISSN 2059-7983 JRNL PMID 31793902 JRNL DOI 10.1107/S2059798319014475 REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.02 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.910 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 28898 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.040 REMARK 3 FREE R VALUE TEST SET COUNT : 1746 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.4300 - 4.6900 1.00 2257 148 0.2077 0.2691 REMARK 3 2 4.6900 - 3.7200 1.00 2288 147 0.1718 0.1658 REMARK 3 3 3.7200 - 3.2500 1.00 2265 145 0.2134 0.2593 REMARK 3 4 3.2500 - 2.9600 1.00 2272 148 0.2424 0.2748 REMARK 3 5 2.9600 - 2.7400 1.00 2244 142 0.2357 0.3516 REMARK 3 6 2.7400 - 2.5800 1.00 2270 148 0.2547 0.3218 REMARK 3 7 2.5800 - 2.4500 1.00 2282 145 0.2358 0.2927 REMARK 3 8 2.4500 - 2.3500 1.00 2227 138 0.2246 0.3298 REMARK 3 9 2.3500 - 2.2600 1.00 2263 148 0.2332 0.2513 REMARK 3 10 2.2600 - 2.1800 1.00 2272 147 0.2351 0.2592 REMARK 3 11 2.1800 - 2.1100 1.00 2277 144 0.2567 0.2963 REMARK 3 12 2.1100 - 2.0500 1.00 2235 146 0.2851 0.2981 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.294 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.046 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 46.91 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 60.61 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.015 1411 REMARK 3 ANGLE : 1.203 1886 REMARK 3 CHIRALITY : 0.050 209 REMARK 3 PLANARITY : 0.007 253 REMARK 3 DIHEDRAL : 17.983 554 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6OWZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-MAY-19. REMARK 100 THE DEPOSITION ID IS D_1000241498. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-OCT-17 REMARK 200 TEMPERATURE (KELVIN) : 75 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I23 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 2.3843, 2.7552, 4.5085, 4.3200 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17581 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 43.020 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 26.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 5WNW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.55 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.77 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22-34% PEG 3000, 70-270 MM ZINC REMARK 280 ACETATE, AND 0.1 M IMIDAZOLE, PH 8.0, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+1/4 REMARK 290 4555 Y,-X,Z+3/4 REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z+1/2 REMARK 290 7555 Y,X,-Z+3/4 REMARK 290 8555 -Y,-X,-Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 128.57500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 64.28750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 192.86250 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 128.57500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 192.86250 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 64.28750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2970 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 328 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 28 REMARK 465 GLY A 48 REMARK 465 GLN A 49 REMARK 465 ARG A 50 REMARK 465 ASP A 51 REMARK 465 GLN A 52 REMARK 465 MET A 53 REMARK 465 LYS A 54 REMARK 465 ARG A 55 REMARK 465 PRO A 56 REMARK 465 LEU A 123 REMARK 465 THR A 124 REMARK 465 SER B 28 REMARK 465 PHE B 29 REMARK 465 ASP B 51 REMARK 465 GLN B 52 REMARK 465 MET B 53 REMARK 465 LYS B 54 REMARK 465 ARG B 55 REMARK 465 PRO B 56 REMARK 465 PRO B 57 REMARK 465 LEU B 58 REMARK 465 LEU B 123 REMARK 465 THR B 124 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PHE A 29 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 30 CG CD CE NZ REMARK 470 LYS A 121 CG CD CE NZ REMARK 470 ARG A 122 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 30 CG CD CE NZ REMARK 470 GLN B 40 CG CD OE1 NE2 REMARK 470 ARG B 43 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 47 CG CD CE NZ REMARK 470 GLN B 49 CG CD OE1 NE2 REMARK 470 ARG B 50 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 59 CG CD OE1 OE2 REMARK 470 GLU B 60 CG CD OE1 OE2 REMARK 470 LYS B 121 CG CD CE NZ REMARK 470 ARG B 122 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ZN ZN A 207 HN3 IMD B 203 1.44 REMARK 500 ZN ZN A 206 HN1 IMD A 213 1.49 REMARK 500 ZN ZN A 205 H4 IMD A 212 1.55 REMARK 500 OE2 GLU A 120 ZN ZN A 206 1.61 REMARK 500 OE2 GLU A 44 O HOH A 301 1.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 HZ1 LYS B 90 ZN ZN B 201 8555 1.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 31 170.66 -56.12 REMARK 500 MET A 46 14.97 -65.46 REMARK 500 ALA A 69 49.45 -90.32 REMARK 500 ASP B 31 49.19 -98.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASP A 31 LEU A 32 -148.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 36 OD2 REMARK 620 2 GLU A 44 OE1 55.3 REMARK 620 3 HOH A 301 O 53.3 10.2 REMARK 620 4 HOH A 329 O 44.3 11.5 15.4 REMARK 620 5 GLU B 110 OE1 118.6 81.8 90.8 87.3 REMARK 620 6 GLU B 110 OE2 118.9 81.0 89.9 86.8 1.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 202 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 59 OE2 REMARK 620 2 ASP B 71 OD2 103.2 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 207 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 65 ND1 REMARK 620 2 GLU B 120 OE2 90.8 REMARK 620 3 IMD B 203 N3 100.8 128.7 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 203 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 66 OD1 REMARK 620 2 ASP A 66 OD2 55.7 REMARK 620 3 HOH A 324 O 97.9 83.4 REMARK 620 4 HOH A 327 O 90.1 87.6 161.6 REMARK 620 5 ASP B 66 OD1 56.9 63.8 41.1 144.4 REMARK 620 6 ASP B 66 OD2 55.2 60.9 42.7 141.8 2.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 204 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 71 OD2 REMARK 620 2 ASP A 74 OD2 99.3 REMARK 620 3 HOH A 333 O 115.6 16.8 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 205 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 86 OE1 REMARK 620 2 HOH A 326 O 105.9 REMARK 620 3 GLU B 79 OE2 71.9 78.9 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 209 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 87 OE1 REMARK 620 2 GLU A 87 OE2 50.0 REMARK 620 3 GLU A 87 OE1 0.0 50.0 REMARK 620 4 GLU A 87 OE2 50.0 0.0 50.0 REMARK 620 5 HOH A 328 O 96.9 144.6 96.9 144.6 REMARK 620 6 HOH A 328 O 96.9 144.6 96.9 144.6 0.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 206 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 IMD A 213 N1 REMARK 620 2 HIS B 65 ND1 97.6 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 74 OD2 REMARK 620 2 GLU B 87 OE2 85.9 REMARK 620 3 LYS B 90 NZ 87.0 6.5 REMARK 620 4 HOH B 312 O 95.3 141.1 147.4 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 207 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 208 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 209 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 210 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 211 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IMD A 212 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IMD A 213 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IOD A 214 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IOD A 215 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IMD B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IOD B 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IOD B 205 DBREF 6OWZ A 29 124 UNP P77754 SPY_ECOLI 52 147 DBREF 6OWZ B 29 124 UNP P77754 SPY_ECOLI 52 147 SEQADV 6OWZ SER A 28 UNP P77754 EXPRESSION TAG SEQADV 6OWZ LEU A 96 UNP P77754 HIS 119 ENGINEERED MUTATION SEQADV 6OWZ SER B 28 UNP P77754 EXPRESSION TAG SEQADV 6OWZ LEU B 96 UNP P77754 HIS 119 ENGINEERED MUTATION SEQRES 1 A 97 SER PHE LYS ASP LEU ASN LEU THR ASP ALA GLN LYS GLN SEQRES 2 A 97 GLN ILE ARG GLU ILE MET LYS GLY GLN ARG ASP GLN MET SEQRES 3 A 97 LYS ARG PRO PRO LEU GLU GLU ARG ARG ALA MET HIS ASP SEQRES 4 A 97 ILE ILE ALA SER ASP THR PHE ASP LYS VAL LYS ALA GLU SEQRES 5 A 97 ALA GLN ILE ALA LYS MET GLU GLU GLN ARG LYS ALA ASN SEQRES 6 A 97 MET LEU ALA LEU MET GLU THR GLN ASN LYS ILE TYR ASN SEQRES 7 A 97 ILE LEU THR PRO GLU GLN LYS LYS GLN PHE ASN ALA ASN SEQRES 8 A 97 PHE GLU LYS ARG LEU THR SEQRES 1 B 97 SER PHE LYS ASP LEU ASN LEU THR ASP ALA GLN LYS GLN SEQRES 2 B 97 GLN ILE ARG GLU ILE MET LYS GLY GLN ARG ASP GLN MET SEQRES 3 B 97 LYS ARG PRO PRO LEU GLU GLU ARG ARG ALA MET HIS ASP SEQRES 4 B 97 ILE ILE ALA SER ASP THR PHE ASP LYS VAL LYS ALA GLU SEQRES 5 B 97 ALA GLN ILE ALA LYS MET GLU GLU GLN ARG LYS ALA ASN SEQRES 6 B 97 MET LEU ALA LEU MET GLU THR GLN ASN LYS ILE TYR ASN SEQRES 7 B 97 ILE LEU THR PRO GLU GLN LYS LYS GLN PHE ASN ALA ASN SEQRES 8 B 97 PHE GLU LYS ARG LEU THR HET ZN A 201 1 HET ZN A 202 1 HET ZN A 203 1 HET ZN A 204 1 HET ZN A 205 1 HET ZN A 206 1 HET ZN A 207 1 HET ZN A 208 1 HET ZN A 209 1 HET CL A 210 1 HET CL A 211 1 HET IMD A 212 10 HET IMD A 213 10 HET IOD A 214 1 HET IOD A 215 1 HET ZN B 201 1 HET ZN B 202 1 HET IMD B 203 10 HET IOD B 204 1 HET IOD B 205 1 HETNAM ZN ZINC ION HETNAM CL CHLORIDE ION HETNAM IMD IMIDAZOLE HETNAM IOD IODIDE ION FORMUL 3 ZN 11(ZN 2+) FORMUL 12 CL 2(CL 1-) FORMUL 14 IMD 3(C3 H5 N2 1+) FORMUL 16 IOD 4(I 1-) FORMUL 23 HOH *62(H2 O) HELIX 1 AA1 THR A 35 MET A 46 1 12 HELIX 2 AA2 LEU A 58 ALA A 69 1 12 HELIX 3 AA3 ASP A 74 MET A 85 1 12 HELIX 4 AA4 MET A 85 ILE A 106 1 22 HELIX 5 AA5 THR A 108 LYS A 121 1 14 HELIX 6 AA6 THR B 35 GLY B 48 1 14 HELIX 7 AA7 GLU B 60 ALA B 69 1 10 HELIX 8 AA8 ASP B 74 ILE B 106 1 33 HELIX 9 AA9 THR B 108 ARG B 122 1 15 LINK OD2 ASP A 36 ZN ZN A 201 1555 5655 2.39 LINK OE1 GLU A 44 ZN ZN A 201 1555 1555 2.01 LINK OE2 GLU A 59 ZN ZN A 202 1555 1555 1.71 LINK ND1 HIS A 65 ZN ZN A 207 1555 1555 2.03 LINK OD1 ASP A 66 ZN ZN A 203 1555 1555 2.05 LINK OD2 ASP A 66 ZN ZN A 203 1555 1555 2.57 LINK OD2 ASP A 71 ZN ZN A 204 1555 8445 1.94 LINK OD2 ASP A 74 ZN ZN A 204 1555 1555 1.99 LINK OE1 GLU A 86 ZN ZN A 205 1555 1555 1.93 LINK OE1 GLU A 87 ZN ZN A 209 1555 1555 2.66 LINK OE2 GLU A 87 ZN ZN A 209 1555 1555 2.53 LINK OE1 GLU A 87 ZN ZN A 209 1555 8555 2.42 LINK OE2 GLU A 87 ZN ZN A 209 1555 8555 2.55 LINK OE2 GLU A 98 ZN ZN A 208 1555 1555 2.70 LINK ZN ZN A 201 O HOH A 301 1555 1555 2.33 LINK ZN ZN A 201 O HOH A 329 1555 1555 1.96 LINK ZN ZN A 201 OE1 GLU B 110 1445 1555 2.01 LINK ZN ZN A 201 OE2 GLU B 110 1445 1555 2.31 LINK ZN ZN A 202 OD2 ASP B 71 1565 1555 1.94 LINK ZN ZN A 203 O HOH A 324 1555 1555 1.88 LINK ZN ZN A 203 O HOH A 327 1555 1555 2.23 LINK ZN ZN A 203 OD1 ASP B 66 1565 1555 2.38 LINK ZN ZN A 203 OD2 ASP B 66 1565 1555 1.99 LINK ZN ZN A 204 O HOH A 333 1555 1555 2.08 LINK ZN ZN A 205 O HOH A 326 1555 1555 1.82 LINK ZN ZN A 205 OE2 GLU B 79 8555 1555 1.80 LINK ZN ZN A 206 N1 IMD A 213 1555 1555 2.00 LINK ZN ZN A 206 ND1 HIS B 65 1555 1555 2.01 LINK ZN ZN A 207 OE2 GLU B 120 1555 1555 1.91 LINK ZN ZN A 207 N3 IMD B 203 1555 1555 1.94 LINK ZN ZN A 209 O HOH A 328 1555 1555 2.02 LINK ZN ZN A 209 O HOH A 328 1555 8555 2.02 LINK OD2 ASP B 74 ZN ZN B 201 1555 1555 1.95 LINK OE2AGLU B 87 ZN ZN B 201 1555 8555 1.84 LINK NZ LYS B 90 ZN ZN B 201 1555 8555 1.89 LINK ZN ZN B 201 O HOH B 312 1555 1555 2.07 SITE 1 AC1 5 ASP A 36 GLU A 44 HOH A 301 HOH A 329 SITE 2 AC1 5 GLU B 110 SITE 1 AC2 3 GLU A 59 HOH A 340 ASP B 71 SITE 1 AC3 6 ASP A 66 IMD A 213 HOH A 324 HOH A 327 SITE 2 AC3 6 ASP B 66 IMD B 203 SITE 1 AC4 4 ASP A 71 ASP A 74 HOH A 333 HOH A 343 SITE 1 AC5 4 GLU A 86 IMD A 212 HOH A 326 GLU B 79 SITE 1 AC6 4 GLU A 120 CL A 210 IMD A 213 HIS B 65 SITE 1 AC7 4 HIS A 65 CL A 211 GLU B 120 IMD B 203 SITE 1 AC8 1 GLU A 98 SITE 1 AC9 2 GLU A 87 HOH A 328 SITE 1 AD1 6 PHE A 119 GLU A 120 ZN A 206 IMD A 213 SITE 2 AD1 6 ARG B 61 HIS B 65 SITE 1 AD2 6 ARG A 61 HIS A 65 ZN A 207 PHE B 119 SITE 2 AD2 6 GLU B 120 IMD B 203 SITE 1 AD3 7 ALA A 83 GLU A 86 ZN A 205 HOH A 326 SITE 2 AD3 7 LYS B 75 VAL B 76 GLU B 79 SITE 1 AD4 9 HIS A 65 ASP A 66 GLU A 120 ZN A 203 SITE 2 AD4 9 ZN A 206 CL A 210 ARG B 62 HIS B 65 SITE 3 AD4 9 IMD B 203 SITE 1 AD5 2 GLN A 100 PHE A 115 SITE 1 AD6 2 MET A 46 THR A 99 SITE 1 AD7 4 ASP B 74 GLU B 87 LYS B 90 HOH B 312 SITE 1 AD8 1 GLU B 98 SITE 1 AD9 10 ARG A 62 HIS A 65 ZN A 203 ZN A 207 SITE 2 AD9 10 CL A 211 IMD A 213 HOH A 324 HIS B 65 SITE 3 AD9 10 ASP B 66 GLU B 120 SITE 1 AE1 1 PHE B 115 SITE 1 AE2 1 PHE B 115 CRYST1 43.020 43.020 257.150 90.00 90.00 90.00 P 41 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023245 0.000000 0.000000 0.00000 SCALE2 0.000000 0.023245 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003889 0.00000