HEADER HYDROLASE 15-MAY-19 6OZF TITLE CRYSTAL STRUCTURE OF THERMOTOGA MARITIMA (TM) ENDONUCLEASE V (D110N) TITLE 2 IN COMPLEX WITH A 12MER DNA CONTAINING AN INOSINE FOLLOWED BY A RIBO- TITLE 3 ADENOSINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENDONUCLEASE V; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: DEOXYINOSINE 3'ENDONUCLEASE,DEOXYRIBONUCLEASE V,DNASE V; COMPND 5 EC: 3.1.21.7; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: DNA/RNA (5'-D(P*AP*AP*TP*GP*I)-R(P*A)- COMPND 10 D(P*GP*AP*TP*GP*CP*T)-3'); COMPND 11 CHAIN: C, D; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOTOGA MARITIMA; SOURCE 3 ORGANISM_TAXID: 2336; SOURCE 4 GENE: NFI, TM_1865; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 10 ORGANISM_TAXID: 32630 KEYWDS NUCLEIC ACID HYDROLYSIS, RNA RECOGNITION, METAL ION DEPENDENT KEYWDS 2 CATALYSIS, DNA DAMAGE, ADENOSINE DEAMINATION, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR N.L.SAMARA,W.YANG REVDAT 3 11-OCT-23 6OZF 1 LINK REVDAT 2 16-OCT-19 6OZF 1 JRNL REVDAT 1 04-SEP-19 6OZF 0 JRNL AUTH J.WU,N.L.SAMARA,I.KURAOKA,W.YANG JRNL TITL EVOLUTION OF INOSINE-SPECIFIC ENDONUCLEASE V FROM BACTERIAL JRNL TITL 2 DNASE TO EUKARYOTIC RNASE. JRNL REF MOL.CELL V. 76 44 2019 JRNL REFN ISSN 1097-2765 JRNL PMID 31444105 JRNL DOI 10.1016/J.MOLCEL.2019.06.046 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.12_2829: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.09 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 47481 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.198 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.920 REMARK 3 FREE R VALUE TEST SET COUNT : 2334 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.0962 - 4.6223 1.00 2890 130 0.1537 0.1928 REMARK 3 2 4.6223 - 3.6715 1.00 2734 143 0.1299 0.1360 REMARK 3 3 3.6715 - 3.2081 1.00 2718 142 0.1440 0.1690 REMARK 3 4 3.2081 - 2.9151 1.00 2700 119 0.1723 0.2188 REMARK 3 5 2.9151 - 2.7064 1.00 2685 135 0.1831 0.2120 REMARK 3 6 2.7064 - 2.5469 1.00 2682 132 0.1857 0.1957 REMARK 3 7 2.5469 - 2.4194 0.99 2619 144 0.1766 0.2286 REMARK 3 8 2.4194 - 2.3142 0.99 2680 137 0.1673 0.1966 REMARK 3 9 2.3142 - 2.2251 0.99 2623 135 0.1682 0.2031 REMARK 3 10 2.2251 - 2.1484 0.99 2660 111 0.1710 0.2127 REMARK 3 11 2.1484 - 2.0812 0.99 2652 132 0.1784 0.2226 REMARK 3 12 2.0812 - 2.0217 0.99 2600 146 0.1915 0.2495 REMARK 3 13 2.0217 - 1.9685 0.99 2605 144 0.1962 0.2418 REMARK 3 14 1.9685 - 1.9205 0.99 2629 134 0.2004 0.2595 REMARK 3 15 1.9205 - 1.8769 0.98 2564 157 0.2054 0.2438 REMARK 3 16 1.8769 - 1.8369 0.98 2564 148 0.2341 0.2324 REMARK 3 17 1.8369 - 1.8002 0.97 2542 145 0.2565 0.2963 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.400 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 4302 REMARK 3 ANGLE : 1.041 5927 REMARK 3 CHIRALITY : 0.067 645 REMARK 3 PLANARITY : 0.006 674 REMARK 3 DIHEDRAL : 21.684 2531 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 24 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 12 ) REMARK 3 ORIGIN FOR THE GROUP (A): 73.6936 28.1221 15.1331 REMARK 3 T TENSOR REMARK 3 T11: 0.2560 T22: 0.2137 REMARK 3 T33: 0.2203 T12: -0.0093 REMARK 3 T13: 0.0157 T23: -0.0734 REMARK 3 L TENSOR REMARK 3 L11: 9.7267 L22: 2.5955 REMARK 3 L33: 0.2478 L12: 3.0129 REMARK 3 L13: 1.6185 L23: 0.2633 REMARK 3 S TENSOR REMARK 3 S11: 0.1320 S12: -0.3318 S13: 0.2144 REMARK 3 S21: 0.2782 S22: -0.2641 S23: 0.2241 REMARK 3 S31: -0.0896 S32: -0.1819 S33: 0.1147 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 13 THROUGH 26 ) REMARK 3 ORIGIN FOR THE GROUP (A): 62.4586 29.1554 8.5313 REMARK 3 T TENSOR REMARK 3 T11: 0.1917 T22: 0.0257 REMARK 3 T33: 0.5529 T12: 0.2850 REMARK 3 T13: -0.1380 T23: -0.1164 REMARK 3 L TENSOR REMARK 3 L11: 3.4758 L22: 3.6813 REMARK 3 L33: 5.9453 L12: 1.8898 REMARK 3 L13: 1.8839 L23: -2.4420 REMARK 3 S TENSOR REMARK 3 S11: -0.0579 S12: -1.0046 S13: 1.0244 REMARK 3 S21: 0.1054 S22: -0.9329 S23: 0.8598 REMARK 3 S31: -0.8520 S32: -1.6140 S33: 0.0601 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 27 THROUGH 37 ) REMARK 3 ORIGIN FOR THE GROUP (A): 81.9527 30.6873 -6.6098 REMARK 3 T TENSOR REMARK 3 T11: 0.6068 T22: 0.3215 REMARK 3 T33: 0.4110 T12: -0.0940 REMARK 3 T13: 0.0054 T23: 0.0805 REMARK 3 L TENSOR REMARK 3 L11: 5.6944 L22: 6.5395 REMARK 3 L33: 5.0121 L12: -4.3424 REMARK 3 L13: 4.2065 L23: -2.0852 REMARK 3 S TENSOR REMARK 3 S11: 0.0791 S12: 1.9353 S13: 1.2401 REMARK 3 S21: -1.1127 S22: -0.2686 S23: -0.6883 REMARK 3 S31: -0.5785 S32: 0.3513 S33: -0.0291 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 38 THROUGH 60 ) REMARK 3 ORIGIN FOR THE GROUP (A): 82.3818 13.7465 7.9173 REMARK 3 T TENSOR REMARK 3 T11: 0.1345 T22: 0.1552 REMARK 3 T33: 0.1206 T12: -0.0042 REMARK 3 T13: -0.0260 T23: -0.0149 REMARK 3 L TENSOR REMARK 3 L11: 8.0573 L22: 7.0906 REMARK 3 L33: 7.0389 L12: 1.2935 REMARK 3 L13: -1.0582 L23: -0.6544 REMARK 3 S TENSOR REMARK 3 S11: -0.0351 S12: -0.2899 S13: -0.2347 REMARK 3 S21: 0.0319 S22: 0.0964 S23: 0.2818 REMARK 3 S31: 0.7144 S32: 0.1271 S33: -0.0782 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 61 THROUGH 75 ) REMARK 3 ORIGIN FOR THE GROUP (A): 89.2161 16.0280 5.7068 REMARK 3 T TENSOR REMARK 3 T11: 0.1456 T22: 0.1226 REMARK 3 T33: 0.1492 T12: 0.0209 REMARK 3 T13: -0.0349 T23: -0.0216 REMARK 3 L TENSOR REMARK 3 L11: 8.1661 L22: 2.8119 REMARK 3 L33: 5.7708 L12: 0.1053 REMARK 3 L13: -1.1467 L23: 1.5609 REMARK 3 S TENSOR REMARK 3 S11: 0.1117 S12: -0.0378 S13: 0.0704 REMARK 3 S21: -0.0631 S22: 0.1449 S23: -0.1295 REMARK 3 S31: 0.2671 S32: 0.7809 S33: -0.1922 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 76 THROUGH 99 ) REMARK 3 ORIGIN FOR THE GROUP (A): 73.2676 18.4595 12.3519 REMARK 3 T TENSOR REMARK 3 T11: 0.1245 T22: 0.1626 REMARK 3 T33: 0.1242 T12: -0.0041 REMARK 3 T13: 0.0090 T23: -0.0271 REMARK 3 L TENSOR REMARK 3 L11: 8.2729 L22: 3.6202 REMARK 3 L33: 0.2951 L12: 5.1764 REMARK 3 L13: -0.1564 L23: 0.1171 REMARK 3 S TENSOR REMARK 3 S11: 0.2823 S12: -0.5528 S13: -0.1529 REMARK 3 S21: 0.2846 S22: -0.2574 S23: -0.0536 REMARK 3 S31: 0.1021 S32: -0.0113 S33: -0.0670 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 100 THROUGH 110 ) REMARK 3 ORIGIN FOR THE GROUP (A): 85.2601 22.7743 3.7099 REMARK 3 T TENSOR REMARK 3 T11: 0.1025 T22: 0.1231 REMARK 3 T33: 0.1319 T12: 0.0200 REMARK 3 T13: 0.0306 T23: -0.0214 REMARK 3 L TENSOR REMARK 3 L11: 5.6150 L22: 7.7069 REMARK 3 L33: 7.6722 L12: 2.5213 REMARK 3 L13: 1.1185 L23: -1.1997 REMARK 3 S TENSOR REMARK 3 S11: -0.3204 S12: 0.4612 S13: 0.1396 REMARK 3 S21: -0.1610 S22: 0.3484 S23: -0.4156 REMARK 3 S31: -0.3105 S32: 0.4560 S33: 0.0477 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 111 THROUGH 138 ) REMARK 3 ORIGIN FOR THE GROUP (A): 72.4001 24.7344 2.0075 REMARK 3 T TENSOR REMARK 3 T11: 0.1723 T22: 0.1199 REMARK 3 T33: 0.1865 T12: 0.0146 REMARK 3 T13: -0.0562 T23: 0.0234 REMARK 3 L TENSOR REMARK 3 L11: 2.8326 L22: 1.5961 REMARK 3 L33: 2.8127 L12: 0.1679 REMARK 3 L13: 0.6446 L23: 1.1143 REMARK 3 S TENSOR REMARK 3 S11: -0.2613 S12: 0.0160 S13: 0.3878 REMARK 3 S21: -0.2573 S22: -0.0082 S23: 0.4106 REMARK 3 S31: -0.3860 S32: -0.0775 S33: 0.2538 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 139 THROUGH 163 ) REMARK 3 ORIGIN FOR THE GROUP (A): 67.9258 16.1924 -13.5469 REMARK 3 T TENSOR REMARK 3 T11: 0.2960 T22: 0.3454 REMARK 3 T33: 0.2306 T12: -0.0707 REMARK 3 T13: -0.1157 T23: 0.0337 REMARK 3 L TENSOR REMARK 3 L11: 5.6070 L22: 3.4234 REMARK 3 L33: 8.2694 L12: -0.3940 REMARK 3 L13: -0.8799 L23: -0.3350 REMARK 3 S TENSOR REMARK 3 S11: -0.1925 S12: 1.0196 S13: 0.0418 REMARK 3 S21: -0.6808 S22: -0.1099 S23: 0.2360 REMARK 3 S31: -0.1775 S32: -0.1248 S33: 0.2225 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 164 THROUGH 207 ) REMARK 3 ORIGIN FOR THE GROUP (A): 76.9643 17.6386 -10.0168 REMARK 3 T TENSOR REMARK 3 T11: 0.2514 T22: 0.2820 REMARK 3 T33: 0.1323 T12: -0.0681 REMARK 3 T13: -0.0242 T23: 0.0492 REMARK 3 L TENSOR REMARK 3 L11: 2.8739 L22: 2.3454 REMARK 3 L33: 3.5050 L12: 1.2482 REMARK 3 L13: 1.2355 L23: 0.6744 REMARK 3 S TENSOR REMARK 3 S11: -0.2522 S12: 0.6728 S13: 0.1331 REMARK 3 S21: -0.5094 S22: 0.1764 S23: 0.0722 REMARK 3 S31: -0.1494 S32: 0.2584 S33: 0.0339 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 208 THROUGH 221 ) REMARK 3 ORIGIN FOR THE GROUP (A): 85.4813 8.4450 4.0339 REMARK 3 T TENSOR REMARK 3 T11: 0.1672 T22: 0.1535 REMARK 3 T33: 0.1916 T12: 0.0279 REMARK 3 T13: -0.0291 T23: -0.0436 REMARK 3 L TENSOR REMARK 3 L11: 7.6894 L22: 7.1830 REMARK 3 L33: 8.4722 L12: -0.9307 REMARK 3 L13: 3.4209 L23: -5.1667 REMARK 3 S TENSOR REMARK 3 S11: 0.0227 S12: 0.1536 S13: -0.3840 REMARK 3 S21: 0.1249 S22: -0.0591 S23: -0.4911 REMARK 3 S31: 0.1901 S32: 0.1268 S33: -0.0170 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 12 ) REMARK 3 ORIGIN FOR THE GROUP (A): 84.0729 30.5509 19.9208 REMARK 3 T TENSOR REMARK 3 T11: 0.2149 T22: 0.2320 REMARK 3 T33: 0.1967 T12: 0.0476 REMARK 3 T13: -0.0158 T23: -0.0547 REMARK 3 L TENSOR REMARK 3 L11: 3.1211 L22: 5.0160 REMARK 3 L33: 3.3680 L12: -2.3161 REMARK 3 L13: 1.7546 L23: -0.4965 REMARK 3 S TENSOR REMARK 3 S11: -0.0754 S12: 0.5692 S13: -0.3193 REMARK 3 S21: 0.1465 S22: -0.0007 S23: -0.2117 REMARK 3 S31: 0.2313 S32: 0.4037 S33: 0.0038 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 13 THROUGH 37 ) REMARK 3 ORIGIN FOR THE GROUP (A): 88.2675 43.1013 22.5446 REMARK 3 T TENSOR REMARK 3 T11: 0.1515 T22: 0.2424 REMARK 3 T33: 0.0917 T12: -0.0297 REMARK 3 T13: -0.0077 T23: -0.0182 REMARK 3 L TENSOR REMARK 3 L11: 2.3312 L22: 4.5462 REMARK 3 L33: 3.6050 L12: -0.3138 REMARK 3 L13: -1.1978 L23: -0.4887 REMARK 3 S TENSOR REMARK 3 S11: 0.3801 S12: 0.6360 S13: 0.3573 REMARK 3 S21: -0.5334 S22: -0.3465 S23: -0.4647 REMARK 3 S31: -0.0331 S32: -0.0517 S33: 0.0167 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 38 THROUGH 60 ) REMARK 3 ORIGIN FOR THE GROUP (A): 73.8020 33.8512 34.1260 REMARK 3 T TENSOR REMARK 3 T11: 0.1442 T22: 0.1546 REMARK 3 T33: 0.1518 T12: -0.0137 REMARK 3 T13: 0.0279 T23: -0.0253 REMARK 3 L TENSOR REMARK 3 L11: 6.6292 L22: 6.1615 REMARK 3 L33: 5.6432 L12: -1.9655 REMARK 3 L13: 1.3564 L23: -0.9620 REMARK 3 S TENSOR REMARK 3 S11: -0.1365 S12: -0.0728 S13: -0.5416 REMARK 3 S21: 0.3968 S22: -0.0987 S23: 0.1628 REMARK 3 S31: 0.3503 S32: -0.0051 S33: 0.1624 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 61 THROUGH 75 ) REMARK 3 ORIGIN FOR THE GROUP (A): 67.4776 37.9756 31.5770 REMARK 3 T TENSOR REMARK 3 T11: 0.1160 T22: 0.2316 REMARK 3 T33: 0.2202 T12: -0.0310 REMARK 3 T13: 0.0002 T23: -0.0681 REMARK 3 L TENSOR REMARK 3 L11: 5.8146 L22: 6.1342 REMARK 3 L33: 2.4216 L12: -2.4110 REMARK 3 L13: -0.0014 L23: 1.9456 REMARK 3 S TENSOR REMARK 3 S11: 0.1067 S12: 0.3168 S13: -0.5836 REMARK 3 S21: -0.0297 S22: -0.4770 S23: 0.9034 REMARK 3 S31: 0.1901 S32: -0.1616 S33: 0.2751 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 76 THROUGH 99 ) REMARK 3 ORIGIN FOR THE GROUP (A): 82.8998 30.3401 29.9702 REMARK 3 T TENSOR REMARK 3 T11: 0.1832 T22: 0.1512 REMARK 3 T33: 0.1725 T12: 0.0014 REMARK 3 T13: 0.0201 T23: -0.0246 REMARK 3 L TENSOR REMARK 3 L11: 7.1452 L22: 2.5768 REMARK 3 L33: 3.9026 L12: -0.2819 REMARK 3 L13: 3.9670 L23: 0.4795 REMARK 3 S TENSOR REMARK 3 S11: 0.2134 S12: 0.0539 S13: -0.7181 REMARK 3 S21: 0.1525 S22: -0.0763 S23: 0.0563 REMARK 3 S31: 0.4450 S32: -0.0801 S33: -0.1438 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 100 THROUGH 110 ) REMARK 3 ORIGIN FOR THE GROUP (A): 72.3473 41.4380 26.5558 REMARK 3 T TENSOR REMARK 3 T11: 0.1543 T22: 0.1758 REMARK 3 T33: 0.1663 T12: 0.0498 REMARK 3 T13: -0.0055 T23: -0.0899 REMARK 3 L TENSOR REMARK 3 L11: 6.8605 L22: 7.1591 REMARK 3 L33: 8.5357 L12: 3.0196 REMARK 3 L13: 3.1642 L23: -0.5315 REMARK 3 S TENSOR REMARK 3 S11: -0.1210 S12: 0.3259 S13: -0.1131 REMARK 3 S21: -0.2055 S22: -0.1908 S23: 0.4758 REMARK 3 S31: -0.1551 S32: -0.2114 S33: 0.3089 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 111 THROUGH 138 ) REMARK 3 ORIGIN FOR THE GROUP (A): 85.9492 42.0226 27.1788 REMARK 3 T TENSOR REMARK 3 T11: 0.1154 T22: 0.1098 REMARK 3 T33: 0.0989 T12: -0.0071 REMARK 3 T13: 0.0073 T23: 0.0250 REMARK 3 L TENSOR REMARK 3 L11: 3.7757 L22: 3.1257 REMARK 3 L33: 3.6197 L12: -0.8493 REMARK 3 L13: -0.0613 L23: 1.3890 REMARK 3 S TENSOR REMARK 3 S11: 0.0597 S12: 0.0564 S13: -0.1212 REMARK 3 S21: -0.1947 S22: -0.0770 S23: -0.0880 REMARK 3 S31: -0.0164 S32: -0.0156 S33: 0.0277 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 139 THROUGH 163 ) REMARK 3 ORIGIN FOR THE GROUP (A): 89.4220 53.6086 40.7942 REMARK 3 T TENSOR REMARK 3 T11: 0.1003 T22: 0.1642 REMARK 3 T33: 0.1353 T12: -0.0295 REMARK 3 T13: -0.0166 T23: 0.0063 REMARK 3 L TENSOR REMARK 3 L11: 6.3195 L22: 6.8476 REMARK 3 L33: 2.5518 L12: -0.9268 REMARK 3 L13: -0.2112 L23: 1.6115 REMARK 3 S TENSOR REMARK 3 S11: 0.0299 S12: -0.0985 S13: 0.5230 REMARK 3 S21: -0.1278 S22: 0.2046 S23: -0.1812 REMARK 3 S31: -0.1552 S32: 0.0635 S33: -0.2045 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 164 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): 84.2597 51.5201 37.1490 REMARK 3 T TENSOR REMARK 3 T11: 0.0842 T22: 0.1149 REMARK 3 T33: 0.1255 T12: -0.0100 REMARK 3 T13: 0.0012 T23: 0.0170 REMARK 3 L TENSOR REMARK 3 L11: 2.3386 L22: 2.3542 REMARK 3 L33: 3.3927 L12: -0.1887 REMARK 3 L13: 0.8031 L23: 1.5338 REMARK 3 S TENSOR REMARK 3 S11: 0.0199 S12: -0.0373 S13: 0.1911 REMARK 3 S21: -0.1437 S22: -0.0237 S23: -0.0065 REMARK 3 S31: -0.2051 S32: 0.0567 S33: 0.0051 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 189 THROUGH 207 ) REMARK 3 ORIGIN FOR THE GROUP (A): 76.4795 52.8334 36.2088 REMARK 3 T TENSOR REMARK 3 T11: 0.1332 T22: 0.1105 REMARK 3 T33: 0.1662 T12: 0.0154 REMARK 3 T13: -0.0280 T23: -0.0166 REMARK 3 L TENSOR REMARK 3 L11: 5.1737 L22: 2.0786 REMARK 3 L33: 7.0052 L12: -0.0999 REMARK 3 L13: -3.7994 L23: -0.1258 REMARK 3 S TENSOR REMARK 3 S11: 0.1324 S12: 0.1074 S13: 0.2678 REMARK 3 S21: -0.0765 S22: -0.0563 S23: 0.2544 REMARK 3 S31: -0.4365 S32: -0.1823 S33: -0.1039 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 208 THROUGH 224 ) REMARK 3 ORIGIN FOR THE GROUP (A): 70.1106 35.2282 40.5874 REMARK 3 T TENSOR REMARK 3 T11: 0.2080 T22: 0.3006 REMARK 3 T33: 0.2312 T12: -0.0569 REMARK 3 T13: 0.0712 T23: -0.0209 REMARK 3 L TENSOR REMARK 3 L11: 5.2400 L22: 3.3114 REMARK 3 L33: 5.0120 L12: 3.2690 REMARK 3 L13: -0.1879 L23: -2.6618 REMARK 3 S TENSOR REMARK 3 S11: 0.1003 S12: -0.3295 S13: -0.1983 REMARK 3 S21: 0.2498 S22: -0.2706 S23: 0.4655 REMARK 3 S31: 0.2974 S32: -0.5266 S33: 0.0731 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 2 THROUGH 12 ) REMARK 3 ORIGIN FOR THE GROUP (A): 66.9304 4.7644 4.7608 REMARK 3 T TENSOR REMARK 3 T11: 0.2911 T22: 0.2347 REMARK 3 T33: 0.2349 T12: -0.0194 REMARK 3 T13: 0.0405 T23: -0.0580 REMARK 3 L TENSOR REMARK 3 L11: 1.9297 L22: 6.6795 REMARK 3 L33: 1.6839 L12: -0.1150 REMARK 3 L13: -0.3773 L23: -3.9051 REMARK 3 S TENSOR REMARK 3 S11: -0.1239 S12: -0.0137 S13: -0.4731 REMARK 3 S21: -0.1612 S22: 0.0412 S23: 0.3832 REMARK 3 S31: 0.6417 S32: -0.1177 S33: 0.0807 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 1 THROUGH 12 ) REMARK 3 ORIGIN FOR THE GROUP (A): 88.9937 33.6817 47.0089 REMARK 3 T TENSOR REMARK 3 T11: 0.2935 T22: 0.3653 REMARK 3 T33: 0.2565 T12: 0.0426 REMARK 3 T13: -0.0237 T23: 0.0302 REMARK 3 L TENSOR REMARK 3 L11: 0.8245 L22: 2.1833 REMARK 3 L33: 7.1563 L12: -3.3705 REMARK 3 L13: 3.4273 L23: -7.2047 REMARK 3 S TENSOR REMARK 3 S11: -0.2152 S12: -0.6462 S13: -0.2789 REMARK 3 S21: 0.3491 S22: 0.1973 S23: -0.1114 REMARK 3 S31: -0.1661 S32: 0.1153 S33: 0.0889 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6OZF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-MAY-19. REMARK 100 THE DEPOSITION ID IS D_1000241565. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-JUN-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47534 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2W35 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.03 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.12 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M CALCIUM ACETATE, 10% W/V REMARK 280 PEG3350, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 X,-Y,-Z REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 -X,-Y+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.78900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 53.19850 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 37.78900 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 53.19850 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11580 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -40.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2190 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11720 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -42.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 222 REMARK 465 GLY A 223 REMARK 465 LEU A 224 REMARK 465 PHE A 225 REMARK 465 DA C 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 DT C 12 C5' C4' O4' C3' O3' C2' C1' REMARK 470 DT C 12 N1 C2 O2 N3 C4 O4 C5 REMARK 470 DT C 12 C7 C6 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG B 194 O HOH B 401 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DI C 5 C4' DI C 5 C3' -0.199 REMARK 500 DI C 5 O4' DI C 5 C4' 0.196 REMARK 500 DI C 5 N3 DI C 5 C4 0.127 REMARK 500 DI C 5 C5 DI C 5 C6 0.140 REMARK 500 DI D 5 C4' DI D 5 C3' -0.205 REMARK 500 DI D 5 O4' DI D 5 C4' 0.199 REMARK 500 DI D 5 N3 DI D 5 C4 0.123 REMARK 500 DI D 5 C5 DI D 5 C6 0.139 REMARK 500 DG D 7 O3' DG D 7 C3' -0.046 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DT D 3 O4' - C1' - N1 ANGL. DEV. = 3.1 DEGREES REMARK 500 DT D 9 O4' - C1' - N1 ANGL. DEV. = 2.6 DEGREES REMARK 500 DG D 10 O4' - C1' - N9 ANGL. DEV. = 6.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 120 66.57 -151.15 REMARK 500 CYS A 154 -6.54 82.61 REMARK 500 CYS B 154 -1.89 82.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 43 OD1 REMARK 620 2 ASP A 43 OD1 25.3 REMARK 620 3 ASP A 43 OD2 48.1 27.1 REMARK 620 4 ASP A 43 OD2 40.7 47.9 46.2 REMARK 620 5 HOH A 419 O 102.0 102.2 82.0 61.2 REMARK 620 6 HOH A 496 O 82.8 86.2 107.8 122.9 169.5 REMARK 620 7 DG C 7 OP1 104.6 79.9 66.5 111.1 101.8 85.8 REMARK 620 8 HOH C 227 O 170.3 162.0 141.4 143.4 83.0 91.0 82.2 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 302 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 43 OD2 REMARK 620 2 HOH A 412 O 159.8 REMARK 620 3 A C 6 O3' 105.1 90.1 REMARK 620 4 DG C 7 OP1 59.6 134.3 45.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 43 OD1 REMARK 620 2 ASP B 43 OD2 44.8 REMARK 620 3 HOH B 415 O 97.3 54.0 REMARK 620 4 HOH B 519 O 84.3 125.9 173.5 REMARK 620 5 DG D 7 OP1 90.6 104.3 95.4 90.9 REMARK 620 6 HOH D 226 O 175.3 138.3 85.0 93.9 85.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 306 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 435 O REMARK 620 2 A D 6 O3' 91.1 REMARK 620 3 DG D 7 OP1 136.9 49.0 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 101 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DT C 3 OP2 REMARK 620 2 DG C 7 O6 106.3 REMARK 620 3 HOH C 212 O 90.5 159.0 REMARK 620 4 HOH C 216 O 69.2 64.3 135.4 REMARK 620 5 HOH C 220 O 169.4 84.3 79.0 117.6 REMARK 620 6 HOH C 222 O 89.3 81.3 86.5 130.3 91.6 REMARK 620 7 HOH C 228 O 98.6 111.7 77.1 67.8 77.8 161.8 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA D 101 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DT D 3 OP2 REMARK 620 2 DG D 7 O6 102.4 REMARK 620 3 HOH D 210 O 87.3 167.3 REMARK 620 4 HOH D 215 O 88.2 79.7 92.7 REMARK 620 5 HOH D 218 O 169.7 85.8 83.7 87.2 REMARK 620 6 HOH D 219 O 72.3 67.0 124.4 135.8 117.1 REMARK 620 7 HOH D 222 O 106.8 108.1 76.2 160.6 76.0 62.3 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PG4 B 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA C 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA D 101 DBREF 6OZF A 1 225 UNP Q9X2H9 NFI_THEMA 1 225 DBREF 6OZF B 1 225 UNP Q9X2H9 NFI_THEMA 1 225 DBREF 6OZF C 1 12 PDB 6OZF 6OZF 1 12 DBREF 6OZF D 1 12 PDB 6OZF 6OZF 1 12 SEQADV 6OZF ASN A 110 UNP Q9X2H9 ASP 110 ENGINEERED MUTATION SEQADV 6OZF ASN B 110 UNP Q9X2H9 ASP 110 ENGINEERED MUTATION SEQRES 1 A 225 MET ASP TYR ARG GLN LEU HIS ARG TRP ASP LEU PRO PRO SEQRES 2 A 225 GLU GLU ALA ILE LYS VAL GLN ASN GLU LEU ARG LYS LYS SEQRES 3 A 225 ILE LYS LEU THR PRO TYR GLU GLY GLU PRO GLU TYR VAL SEQRES 4 A 225 ALA GLY VAL ASP LEU SER PHE PRO GLY LYS GLU GLU GLY SEQRES 5 A 225 LEU ALA VAL ILE VAL VAL LEU GLU TYR PRO SER PHE LYS SEQRES 6 A 225 ILE LEU GLU VAL VAL SER GLU ARG GLY GLU ILE THR PHE SEQRES 7 A 225 PRO TYR ILE PRO GLY LEU LEU ALA PHE ARG GLU GLY PRO SEQRES 8 A 225 LEU PHE LEU LYS ALA TRP GLU LYS LEU ARG THR LYS PRO SEQRES 9 A 225 ASP VAL VAL VAL PHE ASN GLY GLN GLY LEU ALA HIS PRO SEQRES 10 A 225 ARG LYS LEU GLY ILE ALA SER HIS MET GLY LEU PHE ILE SEQRES 11 A 225 GLU ILE PRO THR ILE GLY VAL ALA LYS SER ARG LEU TYR SEQRES 12 A 225 GLY THR PHE LYS MET PRO GLU ASP LYS ARG CYS SER TRP SEQRES 13 A 225 SER TYR LEU TYR ASP GLY GLU GLU ILE ILE GLY CYS VAL SEQRES 14 A 225 ILE ARG THR LYS GLU GLY SER ALA PRO ILE PHE VAL SER SEQRES 15 A 225 PRO GLY HIS LEU MET ASP VAL GLU SER SER LYS ARG LEU SEQRES 16 A 225 ILE LYS ALA PHE THR LEU PRO GLY ARG ARG ILE PRO GLU SEQRES 17 A 225 PRO THR ARG LEU ALA HIS ILE TYR THR GLN ARG LEU LYS SEQRES 18 A 225 LYS GLY LEU PHE SEQRES 1 B 225 MET ASP TYR ARG GLN LEU HIS ARG TRP ASP LEU PRO PRO SEQRES 2 B 225 GLU GLU ALA ILE LYS VAL GLN ASN GLU LEU ARG LYS LYS SEQRES 3 B 225 ILE LYS LEU THR PRO TYR GLU GLY GLU PRO GLU TYR VAL SEQRES 4 B 225 ALA GLY VAL ASP LEU SER PHE PRO GLY LYS GLU GLU GLY SEQRES 5 B 225 LEU ALA VAL ILE VAL VAL LEU GLU TYR PRO SER PHE LYS SEQRES 6 B 225 ILE LEU GLU VAL VAL SER GLU ARG GLY GLU ILE THR PHE SEQRES 7 B 225 PRO TYR ILE PRO GLY LEU LEU ALA PHE ARG GLU GLY PRO SEQRES 8 B 225 LEU PHE LEU LYS ALA TRP GLU LYS LEU ARG THR LYS PRO SEQRES 9 B 225 ASP VAL VAL VAL PHE ASN GLY GLN GLY LEU ALA HIS PRO SEQRES 10 B 225 ARG LYS LEU GLY ILE ALA SER HIS MET GLY LEU PHE ILE SEQRES 11 B 225 GLU ILE PRO THR ILE GLY VAL ALA LYS SER ARG LEU TYR SEQRES 12 B 225 GLY THR PHE LYS MET PRO GLU ASP LYS ARG CYS SER TRP SEQRES 13 B 225 SER TYR LEU TYR ASP GLY GLU GLU ILE ILE GLY CYS VAL SEQRES 14 B 225 ILE ARG THR LYS GLU GLY SER ALA PRO ILE PHE VAL SER SEQRES 15 B 225 PRO GLY HIS LEU MET ASP VAL GLU SER SER LYS ARG LEU SEQRES 16 B 225 ILE LYS ALA PHE THR LEU PRO GLY ARG ARG ILE PRO GLU SEQRES 17 B 225 PRO THR ARG LEU ALA HIS ILE TYR THR GLN ARG LEU LYS SEQRES 18 B 225 LYS GLY LEU PHE SEQRES 1 C 12 DA DA DT DG DI A DG DA DT DG DC DT SEQRES 1 D 12 DA DA DT DG DI A DG DA DT DG DC DT HET CA A 301 1 HET NA A 302 1 HET CA B 301 1 HET GOL B 302 6 HET GOL B 303 6 HET EDO B 304 4 HET PG4 B 305 13 HET NA B 306 1 HET CA C 101 1 HET EDO C 102 4 HET CA D 101 1 HETNAM CA CALCIUM ION HETNAM NA SODIUM ION HETNAM GOL GLYCEROL HETNAM EDO 1,2-ETHANEDIOL HETNAM PG4 TETRAETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 5 CA 4(CA 2+) FORMUL 6 NA 2(NA 1+) FORMUL 8 GOL 2(C3 H8 O3) FORMUL 10 EDO 2(C2 H6 O2) FORMUL 11 PG4 C8 H18 O5 FORMUL 16 HOH *330(H2 O) HELIX 1 AA1 PRO A 12 ARG A 24 1 13 HELIX 2 AA2 LYS A 25 ILE A 27 5 3 HELIX 3 AA3 LEU A 84 LEU A 100 1 17 HELIX 4 AA4 GLY A 121 GLU A 131 1 11 HELIX 5 AA5 ASP A 188 THR A 200 1 13 HELIX 6 AA6 PRO A 207 LYS A 221 1 15 HELIX 7 AA7 PRO B 12 ARG B 24 1 13 HELIX 8 AA8 LYS B 25 ILE B 27 5 3 HELIX 9 AA9 LEU B 84 GLU B 98 1 15 HELIX 10 AB1 GLY B 121 GLU B 131 1 11 HELIX 11 AB2 ASP B 188 THR B 200 1 13 HELIX 12 AB3 PRO B 207 PHE B 225 1 19 SHEET 1 AA1 2 TYR A 3 GLN A 5 0 SHEET 2 AA1 2 TYR B 3 GLN B 5 -1 O GLN B 5 N TYR A 3 SHEET 1 AA2 8 ILE A 66 GLU A 75 0 SHEET 2 AA2 8 GLU A 51 GLU A 60 -1 N GLY A 52 O GLY A 74 SHEET 3 AA2 8 TYR A 38 GLY A 48 -1 N VAL A 39 O LEU A 59 SHEET 4 AA2 8 VAL A 106 ASN A 110 1 O VAL A 108 N ALA A 40 SHEET 5 AA2 8 THR A 134 ALA A 138 1 O VAL A 137 N PHE A 109 SHEET 6 AA2 8 ILE A 179 PRO A 183 -1 O PHE A 180 N ALA A 138 SHEET 7 AA2 8 GLU A 164 ILE A 170 -1 N CYS A 168 O VAL A 181 SHEET 8 AA2 8 TRP A 156 ASP A 161 -1 N SER A 157 O VAL A 169 SHEET 1 AA3 9 ILE B 66 GLU B 75 0 SHEET 2 AA3 9 GLU B 51 GLU B 60 -1 N GLY B 52 O GLY B 74 SHEET 3 AA3 9 TYR B 38 SER B 45 -1 N VAL B 39 O LEU B 59 SHEET 4 AA3 9 VAL B 106 ASN B 110 1 O VAL B 108 N ALA B 40 SHEET 5 AA3 9 THR B 134 ALA B 138 1 O VAL B 137 N PHE B 109 SHEET 6 AA3 9 ILE B 179 PRO B 183 -1 O PHE B 180 N ALA B 138 SHEET 7 AA3 9 GLU B 164 ILE B 170 -1 N CYS B 168 O VAL B 181 SHEET 8 AA3 9 TRP B 156 ASP B 161 -1 N LEU B 159 O ILE B 166 SHEET 9 AA3 9 THR B 145 PHE B 146 -1 N THR B 145 O TYR B 160 LINK OD1AASP A 43 CA CA A 301 1555 1555 2.36 LINK OD1BASP A 43 CA CA A 301 1555 1555 2.54 LINK OD2AASP A 43 CA CA A 301 1555 1555 2.88 LINK OD2BASP A 43 CA CA A 301 1555 1555 2.81 LINK OD2AASP A 43 NA NA A 302 1555 1555 2.40 LINK CA CA A 301 O HOH A 419 1555 1555 2.43 LINK CA CA A 301 O HOH A 496 1555 1555 2.40 LINK CA CA A 301 OP1 DG C 7 1555 1555 2.27 LINK CA CA A 301 O HOH C 227 1555 1555 2.38 LINK NA NA A 302 O HOH A 412 1555 1555 2.78 LINK NA NA A 302 O3' A C 6 1555 1555 3.13 LINK NA NA A 302 OP1 DG C 7 1555 1555 3.20 LINK OD1 ASP B 43 CA CA B 301 1555 1555 2.36 LINK OD2 ASP B 43 CA CA B 301 1555 1555 3.09 LINK CA CA B 301 O HOH B 415 1555 1555 2.34 LINK CA CA B 301 O HOH B 519 1555 1555 2.37 LINK CA CA B 301 OP1 DG D 7 1555 1555 2.26 LINK CA CA B 301 O HOH D 226 1555 1555 2.46 LINK NA NA B 306 O HOH B 435 1555 1555 2.78 LINK NA NA B 306 O3' A D 6 1555 1555 2.93 LINK NA NA B 306 OP1 DG D 7 1555 1555 2.97 LINK OP2 DT C 3 CA CA C 101 1555 1555 2.39 LINK O6 DG C 7 CA CA C 101 1555 1555 2.31 LINK CA CA C 101 O HOH C 212 1555 1555 2.46 LINK CA CA C 101 O HOH C 216 1555 1555 2.99 LINK CA CA C 101 O HOH C 220 1555 1555 2.40 LINK CA CA C 101 O HOH C 222 1555 1555 2.42 LINK CA CA C 101 O HOH C 228 1555 2555 2.52 LINK OP2 DT D 3 CA CA D 101 1555 1555 2.48 LINK O6 DG D 7 CA CA D 101 1555 1555 2.26 LINK CA CA D 101 O HOH D 210 1555 1555 2.38 LINK CA CA D 101 O HOH D 215 1555 1555 2.28 LINK CA CA D 101 O HOH D 218 1555 1555 2.35 LINK CA CA D 101 O HOH D 219 1555 1555 2.94 LINK CA CA D 101 O HOH D 222 1555 1555 2.20 CISPEP 1 TYR A 61 PRO A 62 0 6.35 CISPEP 2 TYR B 61 PRO B 62 0 6.47 SITE 1 AC1 6 ASP A 43 HIS A 214 HOH A 419 HOH A 496 SITE 2 AC1 6 DG C 7 HOH C 227 SITE 1 AC2 6 ASP A 43 LEU A 44 ASN A 110 HOH A 412 SITE 2 AC2 6 A C 6 DG C 7 SITE 1 AC3 6 ASP B 43 HIS B 214 HOH B 415 HOH B 519 SITE 2 AC3 6 DG D 7 HOH D 226 SITE 1 AC4 4 ASP A 10 GLU B 72 LYS B 99 HOH B 426 SITE 1 AC5 5 ARG A 141 GLY A 144 THR A 145 LYS B 222 SITE 2 AC5 5 PHE B 225 SITE 1 AC6 1 TRP B 156 SITE 1 AC7 7 GLU B 68 VAL B 69 VAL B 70 SER B 71 SITE 2 AC7 7 LYS B 99 ARG B 101 HOH B 466 SITE 1 AC8 5 LEU B 44 ASN B 110 HOH B 435 A D 6 SITE 2 AC8 5 DG D 7 SITE 1 AC9 7 DT C 3 DG C 7 HOH C 212 HOH C 216 SITE 2 AC9 7 HOH C 220 HOH C 222 HOH C 228 SITE 1 AD1 5 ARG A 118 PRO B 202 GLY B 203 DG C 4 SITE 2 AD1 5 HOH C 219 SITE 1 AD2 7 DT D 3 DG D 7 HOH D 210 HOH D 215 SITE 2 AD2 7 HOH D 218 HOH D 219 HOH D 222 CRYST1 63.129 75.578 106.397 90.00 90.00 90.00 P 2 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015841 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013231 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009399 0.00000