HEADER GENE REGULATION 19-MAY-19 6P1A TITLE TRANSCRIPTION ANTITERMINATION FACTOR Q21 IN COMPLEX WITH Q21-BINDING- TITLE 2 ELEMENT DNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: Q PROTEIN; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: TRANSCRIPTION ANTITERMINATION FACTOR Q21; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: DNA (5'- COMPND 8 D(P*CP*TP*CP*AP*TP*TP*GP*AP*GP*CP*AP*AP*AP*TP*GP*AP*GP*CP*AP*AP*G)- COMPND 9 3'); COMPND 10 CHAIN: D, F; COMPND 11 SYNONYM: Q21-BINDING ELEMENT DNA, NONTEMPLATE STRAND; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: DNA (5'- COMPND 15 D(*CP*TP*TP*GP*CP*TP*CP*AP*TP*TP*TP*GP*CP*TP*CP*AP*AP*TP*GP*AP*G)- COMPND 16 3'); COMPND 17 CHAIN: E, G; COMPND 18 SYNONYM: Q21-BINDING ELEMENT DNA, TEMPLATE STRAND; COMPND 19 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PHAGE 21; SOURCE 3 ORGANISM_TAXID: 10743; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 7 EXPRESSION_SYSTEM_VECTOR: PET21A; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: PHAGE 21; SOURCE 11 ORGANISM_TAXID: 10743; SOURCE 12 MOL_ID: 3; SOURCE 13 SYNTHETIC: YES; SOURCE 14 ORGANISM_SCIENTIFIC: PHAGE 21; SOURCE 15 ORGANISM_TAXID: 10743 KEYWDS RNA POLYMERASE, DNA BINDING, TRANSCRIPTION, Q-DEPENDENT KEYWDS 2 ANTITERMINATION, Q ANTITERMINATION FACTOR, GENE REGULATION EXPDTA X-RAY DIFFRACTION AUTHOR Z.YIN,R.H.EBRIGHT REVDAT 5 11-OCT-23 6P1A 1 REMARK REVDAT 4 18-DEC-19 6P1A 1 REMARK REVDAT 3 25-SEP-19 6P1A 1 JRNL REVDAT 2 11-SEP-19 6P1A 1 JRNL REVDAT 1 26-JUN-19 6P1A 0 JRNL AUTH Z.YIN,J.T.KAELBER,R.H.EBRIGHT JRNL TITL STRUCTURAL BASIS OF Q-DEPENDENT ANTITERMINATION. JRNL REF PROC.NATL.ACAD.SCI.USA V. 116 18384 2019 JRNL REFN ESSN 1091-6490 JRNL PMID 31455742 JRNL DOI 10.1073/PNAS.1909801116 REMARK 2 REMARK 2 RESOLUTION. 2.84 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.84 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.81 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 89.4 REMARK 3 NUMBER OF REFLECTIONS : 22885 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.235 REMARK 3 R VALUE (WORKING SET) : 0.231 REMARK 3 FREE R VALUE : 0.275 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 8.730 REMARK 3 FREE R VALUE TEST SET COUNT : 1999 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.8149 - 6.8319 0.99 1811 172 0.2341 0.2846 REMARK 3 2 6.8319 - 5.4252 1.00 1719 166 0.2419 0.2777 REMARK 3 3 5.4252 - 4.7401 1.00 1667 159 0.2010 0.2122 REMARK 3 4 4.7401 - 4.3070 1.00 1682 161 0.1941 0.2348 REMARK 3 5 4.3070 - 3.9985 1.00 1679 160 0.2077 0.2590 REMARK 3 6 3.9985 - 3.7628 1.00 1652 159 0.2204 0.2591 REMARK 3 7 3.7628 - 3.5744 1.00 1655 158 0.2222 0.2841 REMARK 3 8 3.5744 - 3.4189 1.00 1651 159 0.2309 0.2675 REMARK 3 9 3.4189 - 3.2873 0.99 1617 154 0.2436 0.3428 REMARK 3 10 3.2873 - 3.1739 0.98 1587 153 0.2749 0.2924 REMARK 3 11 3.1739 - 3.0747 0.92 1534 147 0.3011 0.3376 REMARK 3 12 3.0747 - 2.9868 0.69 1116 106 0.2954 0.3351 REMARK 3 13 2.9868 - 2.9082 0.50 829 80 0.2956 0.3157 REMARK 3 14 2.9082 - 2.8372 0.43 687 65 0.2975 0.3611 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.370 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.260 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 62.54 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 3 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 7 THROUGH 13 OR RESID REMARK 3 15 THROUGH 34 OR (RESID 35 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 36 THROUGH 98 OR RESID 100 OR REMARK 3 RESID 102 THROUGH 108 OR (RESID 109 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 110 THROUGH 112 OR REMARK 3 RESID 114 THROUGH 116 OR (RESID 117 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 118 THROUGH 153)) REMARK 3 SELECTION : (CHAIN B AND (RESID 7 THROUGH 13 OR RESID REMARK 3 15 THROUGH 34 OR (RESID 35 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 36 THROUGH 98 OR RESID 100 OR REMARK 3 RESID 102 THROUGH 108 OR (RESID 109 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 110 THROUGH 112 OR REMARK 3 RESID 114 THROUGH 116 OR (RESID 117 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 118 THROUGH 153)) REMARK 3 ATOM PAIRS NUMBER : 2020 REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 7 THROUGH 13 OR RESID REMARK 3 15 THROUGH 34 OR (RESID 35 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 36 THROUGH 98 OR RESID 100 OR REMARK 3 RESID 102 THROUGH 108 OR (RESID 109 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 110 THROUGH 112 OR REMARK 3 RESID 114 THROUGH 116 OR (RESID 117 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 118 THROUGH 153)) REMARK 3 SELECTION : (CHAIN C AND (RESID 7 THROUGH 13 OR RESID REMARK 3 15 THROUGH 98 OR RESID 100 OR RESID 102 REMARK 3 THROUGH 112 OR RESID 114 THROUGH 152 OR REMARK 3 (RESID 153 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )))) REMARK 3 ATOM PAIRS NUMBER : 2020 REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 2 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN D REMARK 3 SELECTION : CHAIN F REMARK 3 ATOM PAIRS NUMBER : 414 REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 3 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN E REMARK 3 SELECTION : (CHAIN G AND ((RESID 1 AND (NAME O5 OR REMARK 3 NAME C5 OR NAME C4 OR NAME O4 OR NAME C3 REMARK 3 OR NAME O3 OR NAME C2 OR NAME C1 OR NAME REMARK 3 N1 OR NAME C2 OR NAME O2 OR NAME N3 OR REMARK 3 NAME C4 OR NAME N4 OR NAME C5 OR NAME C6 ) REMARK 3 ) OR RESID 2 THROUGH 21)) REMARK 3 ATOM PAIRS NUMBER : 412 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6P1A COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-MAY-19. REMARK 100 THE DEPOSITION ID IS D_1000240789. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-OCT-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS-II REMARK 200 BEAMLINE : 17-ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25517 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.837 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 5.90 REMARK 200 R MERGE FOR SHELL (I) : 0.91900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6P1B REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M SODIUM CHLORIDE, 0.1 M BIS-TRIS REMARK 280 PH 6.5, 25% PEG 3,350, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 34.78650 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 131.61200 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 34.78650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 131.61200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6680 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22580 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3780 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15970 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, F, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1 REMARK 465 GLY A 2 REMARK 465 ILE A 3 REMARK 465 ARG A 4 REMARK 465 LYS A 157 REMARK 465 ILE A 158 REMARK 465 LYS A 159 REMARK 465 HIS A 160 REMARK 465 VAL A 161 REMARK 465 ALA A 162 REMARK 465 SER B 1 REMARK 465 GLY B 2 REMARK 465 ILE B 3 REMARK 465 ARG B 4 REMARK 465 GLU B 5 REMARK 465 LEU B 6 REMARK 465 ARG B 154 REMARK 465 VAL B 155 REMARK 465 GLU B 156 REMARK 465 LYS B 157 REMARK 465 ILE B 158 REMARK 465 LYS B 159 REMARK 465 HIS B 160 REMARK 465 VAL B 161 REMARK 465 ALA B 162 REMARK 465 SER C 1 REMARK 465 GLY C 2 REMARK 465 ILE C 3 REMARK 465 ARG C 4 REMARK 465 GLU C 5 REMARK 465 LYS C 157 REMARK 465 ILE C 158 REMARK 465 LYS C 159 REMARK 465 HIS C 160 REMARK 465 VAL C 161 REMARK 465 ALA C 162 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 5 CG CD OE1 OE2 REMARK 470 LYS A 153 CG CD CE NZ REMARK 470 LYS B 153 CG CD CE NZ REMARK 470 LEU C 6 CG CD1 CD2 REMARK 470 ARG C 35 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 109 CG CD CE NZ REMARK 470 ARG C 117 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 37 117.63 -165.58 REMARK 500 SER A 46 44.09 -98.26 REMARK 500 VAL A 104 69.45 -105.72 REMARK 500 CYS A 112 -106.22 59.42 REMARK 500 CYS A 112 -106.78 59.42 REMARK 500 SER B 37 118.73 -167.33 REMARK 500 SER B 46 44.42 -104.37 REMARK 500 MET B 53 -69.67 -101.08 REMARK 500 VAL B 104 67.66 -107.09 REMARK 500 CYS B 112 -79.48 -151.48 REMARK 500 SER C 46 44.75 -100.93 REMARK 500 PRO C 49 92.30 -64.13 REMARK 500 VAL C 52 -60.68 -105.75 REMARK 500 THR C 54 50.15 -103.74 REMARK 500 VAL C 104 69.58 -105.12 REMARK 500 CYS C 112 -100.47 58.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 201 DBREF 6P1A A 2 162 UNP Q9XJQ6 Q9XJQ6_9CAUD 2 161 DBREF 6P1A B 2 162 UNP Q9XJQ6 Q9XJQ6_9CAUD 2 161 DBREF 6P1A C 2 162 UNP Q9XJQ6 Q9XJQ6_9CAUD 2 161 DBREF 6P1A D 1 21 PDB 6P1A 6P1A 1 21 DBREF 6P1A E 1 21 PDB 6P1A 6P1A 1 21 DBREF 6P1A F 1 21 PDB 6P1A 6P1A 1 21 DBREF 6P1A G 1 21 PDB 6P1A 6P1A 1 21 SEQADV 6P1A SER A 1 UNP Q9XJQ6 EXPRESSION TAG SEQADV 6P1A GLY A 24 UNP Q9XJQ6 INSERTION SEQADV 6P1A TRP A 26 UNP Q9XJQ6 HIS 25 CONFLICT SEQADV 6P1A VAL A 27 UNP Q9XJQ6 GLY 26 CONFLICT SEQADV 6P1A TYR A 28 UNP Q9XJQ6 LEU 27 CONFLICT SEQADV 6P1A VAL A 47 UNP Q9XJQ6 ILE 46 CONFLICT SEQADV 6P1A SER B 1 UNP Q9XJQ6 EXPRESSION TAG SEQADV 6P1A GLY B 24 UNP Q9XJQ6 INSERTION SEQADV 6P1A TRP B 26 UNP Q9XJQ6 HIS 25 CONFLICT SEQADV 6P1A VAL B 27 UNP Q9XJQ6 GLY 26 CONFLICT SEQADV 6P1A TYR B 28 UNP Q9XJQ6 LEU 27 CONFLICT SEQADV 6P1A VAL B 47 UNP Q9XJQ6 ILE 46 CONFLICT SEQADV 6P1A SER C 1 UNP Q9XJQ6 EXPRESSION TAG SEQADV 6P1A GLY C 24 UNP Q9XJQ6 INSERTION SEQADV 6P1A TRP C 26 UNP Q9XJQ6 HIS 25 CONFLICT SEQADV 6P1A VAL C 27 UNP Q9XJQ6 GLY 26 CONFLICT SEQADV 6P1A TYR C 28 UNP Q9XJQ6 LEU 27 CONFLICT SEQADV 6P1A VAL C 47 UNP Q9XJQ6 ILE 46 CONFLICT SEQRES 1 A 162 SER GLY ILE ARG GLU LEU ASN LEU THR LYS GLU GLN HIS SEQRES 2 A 162 GLU TRP LEU ASN GLY TRP LEU GLU LEU TRP GLY ALA TRP SEQRES 3 A 162 VAL TYR SER GLY ARG LEU GLU LYS ARG MET SER SER VAL SEQRES 4 A 162 ILE ALA LYS PHE MET GLU SER VAL GLU PRO GLY ARG VAL SEQRES 5 A 162 MET THR ARG PRO MET CYS ASN ASP ASP ASP GLY MET LEU SEQRES 6 A 162 ILE SER GLN VAL VAL ASP SER VAL MET TYR ILE ASP LYS SEQRES 7 A 162 LYS ALA PHE GLY ILE LEU LEU SER TYR TYR ALA HIS GLY SEQRES 8 A 162 SER SER LYS HIS ALA ILE ALA SER TYR TYR HIS ARG VAL SEQRES 9 A 162 ALA ARG PRO ARG LYS MET LEU CYS ARG GLY GLY GLY ARG SEQRES 10 A 162 ILE GLN LYS PRO SER LEU ALA THR CYS ARG ARG GLU VAL SEQRES 11 A 162 ASP GLU ILE LEU ASN ALA SER LEU PHE MET ILE TYR PRO SEQRES 12 A 162 VAL LEU ASP SER ALA PHE LYS ASN ARG LYS ARG VAL GLU SEQRES 13 A 162 LYS ILE LYS HIS VAL ALA SEQRES 1 B 162 SER GLY ILE ARG GLU LEU ASN LEU THR LYS GLU GLN HIS SEQRES 2 B 162 GLU TRP LEU ASN GLY TRP LEU GLU LEU TRP GLY ALA TRP SEQRES 3 B 162 VAL TYR SER GLY ARG LEU GLU LYS ARG MET SER SER VAL SEQRES 4 B 162 ILE ALA LYS PHE MET GLU SER VAL GLU PRO GLY ARG VAL SEQRES 5 B 162 MET THR ARG PRO MET CYS ASN ASP ASP ASP GLY MET LEU SEQRES 6 B 162 ILE SER GLN VAL VAL ASP SER VAL MET TYR ILE ASP LYS SEQRES 7 B 162 LYS ALA PHE GLY ILE LEU LEU SER TYR TYR ALA HIS GLY SEQRES 8 B 162 SER SER LYS HIS ALA ILE ALA SER TYR TYR HIS ARG VAL SEQRES 9 B 162 ALA ARG PRO ARG LYS MET LEU CYS ARG GLY GLY GLY ARG SEQRES 10 B 162 ILE GLN LYS PRO SER LEU ALA THR CYS ARG ARG GLU VAL SEQRES 11 B 162 ASP GLU ILE LEU ASN ALA SER LEU PHE MET ILE TYR PRO SEQRES 12 B 162 VAL LEU ASP SER ALA PHE LYS ASN ARG LYS ARG VAL GLU SEQRES 13 B 162 LYS ILE LYS HIS VAL ALA SEQRES 1 C 162 SER GLY ILE ARG GLU LEU ASN LEU THR LYS GLU GLN HIS SEQRES 2 C 162 GLU TRP LEU ASN GLY TRP LEU GLU LEU TRP GLY ALA TRP SEQRES 3 C 162 VAL TYR SER GLY ARG LEU GLU LYS ARG MET SER SER VAL SEQRES 4 C 162 ILE ALA LYS PHE MET GLU SER VAL GLU PRO GLY ARG VAL SEQRES 5 C 162 MET THR ARG PRO MET CYS ASN ASP ASP ASP GLY MET LEU SEQRES 6 C 162 ILE SER GLN VAL VAL ASP SER VAL MET TYR ILE ASP LYS SEQRES 7 C 162 LYS ALA PHE GLY ILE LEU LEU SER TYR TYR ALA HIS GLY SEQRES 8 C 162 SER SER LYS HIS ALA ILE ALA SER TYR TYR HIS ARG VAL SEQRES 9 C 162 ALA ARG PRO ARG LYS MET LEU CYS ARG GLY GLY GLY ARG SEQRES 10 C 162 ILE GLN LYS PRO SER LEU ALA THR CYS ARG ARG GLU VAL SEQRES 11 C 162 ASP GLU ILE LEU ASN ALA SER LEU PHE MET ILE TYR PRO SEQRES 12 C 162 VAL LEU ASP SER ALA PHE LYS ASN ARG LYS ARG VAL GLU SEQRES 13 C 162 LYS ILE LYS HIS VAL ALA SEQRES 1 D 21 DC DT DC DA DT DT DG DA DG DC DA DA DA SEQRES 2 D 21 DT DG DA DG DC DA DA DG SEQRES 1 E 21 DC DT DT DG DC DT DC DA DT DT DT DG DC SEQRES 2 E 21 DT DC DA DA DT DG DA DG SEQRES 1 F 21 DC DT DC DA DT DT DG DA DG DC DA DA DA SEQRES 2 F 21 DT DG DA DG DC DA DA DG SEQRES 1 G 21 DC DT DT DG DC DT DC DA DT DT DT DG DC SEQRES 2 G 21 DT DC DA DA DT DG DA DG HET EDO A 201 10 HET EDO A 202 10 HET EDO B 201 10 HET CL B 202 1 HET CL C 201 1 HETNAM EDO 1,2-ETHANEDIOL HETNAM CL CHLORIDE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 8 EDO 3(C2 H6 O2) FORMUL 11 CL 2(CL 1-) HELIX 1 AA1 THR A 9 SER A 29 1 21 HELIX 2 AA2 GLU A 33 MET A 36 5 4 HELIX 3 AA3 SER A 37 GLU A 45 1 9 HELIX 4 AA4 ASN A 59 TYR A 75 1 17 HELIX 5 AA5 ASP A 77 ALA A 89 1 13 HELIX 6 AA6 SER A 93 VAL A 104 1 12 HELIX 7 AA7 LEU A 111 GLY A 115 5 5 HELIX 8 AA8 SER A 122 GLU A 156 1 35 HELIX 9 AA9 THR B 9 SER B 29 1 21 HELIX 10 AB1 GLU B 33 MET B 36 5 4 HELIX 11 AB2 SER B 37 SER B 46 1 10 HELIX 12 AB3 ASN B 59 TYR B 75 1 17 HELIX 13 AB4 ASP B 77 ALA B 89 1 13 HELIX 14 AB5 SER B 93 VAL B 104 1 12 HELIX 15 AB6 SER B 122 LYS B 153 1 32 HELIX 16 AB7 THR C 9 SER C 29 1 21 HELIX 17 AB8 GLU C 33 MET C 36 5 4 HELIX 18 AB9 SER C 37 SER C 46 1 10 HELIX 19 AC1 ASN C 59 TYR C 75 1 17 HELIX 20 AC2 ASP C 77 ALA C 89 1 13 HELIX 21 AC3 SER C 93 VAL C 104 1 12 HELIX 22 AC4 LEU C 111 GLY C 115 5 5 HELIX 23 AC5 SER C 122 GLU C 156 1 35 SHEET 1 AA1 2 ARG A 108 MET A 110 0 SHEET 2 AA1 2 ARG A 117 GLN A 119 -1 O ARG A 117 N MET A 110 SHEET 1 AA2 2 ARG B 108 LYS B 109 0 SHEET 2 AA2 2 ILE B 118 GLN B 119 -1 O GLN B 119 N ARG B 108 SHEET 1 AA3 2 ARG C 108 LYS C 109 0 SHEET 2 AA3 2 ILE C 118 GLN C 119 -1 O GLN C 119 N ARG C 108 SITE 1 AC1 4 LYS A 109 ILE A 118 GLU B 14 ASN B 17 SITE 1 AC2 2 ASP A 77 ILE A 133 SITE 1 AC3 2 HIS B 13 ASN B 135 CRYST1 69.573 263.224 56.770 90.00 90.00 90.00 P 21 21 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014373 0.000000 0.000000 0.00000 SCALE2 0.000000 0.003799 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017615 0.00000