HEADER HYDROLASE 22-MAY-19 6P2T TITLE BSHB FROM BACILLUS SUBTILIS COMPLEXED WITH CITRATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: N-ACETYL-ALPHA-D-GLUCOSAMINYL L-MALATE DEACETYLASE 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: GLCNAC-MAL DEACETYLASE 1; COMPND 5 EC: 3.5.1.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS (STRAIN 168); SOURCE 3 ORGANISM_TAXID: 224308; SOURCE 4 STRAIN: 168; SOURCE 5 GENE: BSHB1, JOJG, YPJG, BSU22470; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BACILLITHIOL, DEACETYLASE, METAL-DEPENDENT, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR P.D.COOK,C.E.MELOCHE REVDAT 3 11-OCT-23 6P2T 1 LINK REVDAT 2 08-APR-20 6P2T 1 JRNL REVDAT 1 08-JAN-20 6P2T 0 JRNL AUTH R.L.WOODWARD,M.M.CASTLEMAN,C.E.MELOCHE,M.E.KARPEN, JRNL AUTH 2 C.G.CARLSON,W.H.YOBI,J.C.JEPSEN,B.W.LEWIS,B.N.ZARNOSKY, JRNL AUTH 3 P.D.COOK JRNL TITL X-RAY CRYSTALLOGRAPHIC STRUCTURE OF BSHB, THE ZINC-DEPENDENT JRNL TITL 2 DEACETYLASE INVOLVED IN BACILLITHIOL BIOSYNTHESIS. JRNL REF PROTEIN SCI. V. 29 1035 2020 JRNL REFN ESSN 1469-896X JRNL PMID 31867856 JRNL DOI 10.1002/PRO.3808 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0232 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 77.48 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 28202 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.205 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1445 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.90 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2054 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2630 REMARK 3 BIN FREE R VALUE SET COUNT : 120 REMARK 3 BIN FREE R VALUE : 0.2860 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1803 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 28 REMARK 3 SOLVENT ATOMS : 164 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.58 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.13000 REMARK 3 B22 (A**2) : 1.13000 REMARK 3 B33 (A**2) : -3.65000 REMARK 3 B12 (A**2) : 0.56000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.103 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.104 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.075 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.550 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.969 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.960 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1914 ; 0.007 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 1804 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2587 ; 1.344 ; 1.638 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4196 ; 1.314 ; 1.583 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 243 ; 5.875 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 92 ;31.874 ;22.283 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 345 ;14.280 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;16.962 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 250 ; 0.067 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2161 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 392 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.70 REMARK 3 SHRINKAGE RADIUS : 0.70 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6P2T COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-MAY-19. REMARK 100 THE DEPOSITION ID IS D_1000241770. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-DEC-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0782 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29650 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.853 REMARK 200 RESOLUTION RANGE LOW (A) : 77.490 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 14.40 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.10500 REMARK 200 FOR THE DATA SET : 16.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 14.80 REMARK 200 R MERGE FOR SHELL (I) : 1.48500 REMARK 200 R SYM FOR SHELL (I) : 1.48500 REMARK 200 FOR SHELL : 0.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2IXD REMARK 200 REMARK 200 REMARK: PARALLELOGRAM PLATES REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.29 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% PEG 3350, 100 MM SODIUM CITRATE REMARK 280 TRIBASIC, 10 MM HEPES, 25 MM NACL, PH 8.3, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 49.26900 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 28.44547 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 61.62567 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 49.26900 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 28.44547 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 61.62567 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 49.26900 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 28.44547 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 61.62567 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 49.26900 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 28.44547 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 61.62567 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 49.26900 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 28.44547 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 61.62567 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 49.26900 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 28.44547 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 61.62567 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 56.89094 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 123.25133 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 56.89094 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 123.25133 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 56.89094 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 123.25133 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 56.89094 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 123.25133 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 56.89094 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 123.25133 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 56.89094 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 123.25133 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 25860 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 48980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -384.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 197.07600 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 -170.67282 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 246.34500 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 85.33641 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 -0.500000 0.866025 0.000000 246.34500 REMARK 350 BIOMT2 4 0.866025 0.500000 0.000000 -142.22735 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 61.62567 REMARK 350 BIOMT1 5 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 5 0.000000 -1.000000 0.000000 -56.89094 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 61.62567 REMARK 350 BIOMT1 6 -0.500000 -0.866025 0.000000 197.07600 REMARK 350 BIOMT2 6 -0.866025 0.500000 0.000000 113.78188 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 61.62567 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 520 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLU A -7 REMARK 465 ASN A -6 REMARK 465 LEU A -5 REMARK 465 TYR A -4 REMARK 465 PHE A -3 REMARK 465 GLN A -2 REMARK 465 GLY A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 TYR A 2 REMARK 465 GLU A 235 REMARK 465 GLN A 236 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 135 CG CD OE1 OE2 REMARK 470 MET A 226 CE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 14 -28.36 98.72 REMARK 500 MET A 20 29.12 -152.45 REMARK 500 LEU A 79 45.64 -88.84 REMARK 500 ILE A 151 -79.38 -96.78 REMARK 500 ASN A 194 57.53 -119.84 REMARK 500 ASP A 228 -85.38 -149.30 REMARK 500 ASP A 228 -88.56 -149.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 12 ND1 REMARK 620 2 ASP A 15 OD1 131.2 REMARK 620 3 ASP A 15 OD2 95.8 54.6 REMARK 620 4 HIS A 113 NE2 111.0 103.9 84.1 REMARK 620 5 HOH A 454 O 108.1 89.1 143.4 111.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 304 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 221 O REMARK 620 2 ARG A 223 O 83.6 REMARK 620 3 HOH A 447 O 142.3 87.3 REMARK 620 4 HOH A 469 O 63.4 99.5 82.4 REMARK 620 5 HOH A 509 O 70.8 138.3 132.7 97.6 REMARK 620 6 HOH A 531 O 131.5 89.5 84.7 163.9 84.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CIT A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CIT A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 304 DBREF 6P2T A 1 236 UNP P42981 BSHB1_BACSU 1 236 SEQADV 6P2T MET A -19 UNP P42981 EXPRESSION TAG SEQADV 6P2T GLY A -18 UNP P42981 EXPRESSION TAG SEQADV 6P2T SER A -17 UNP P42981 EXPRESSION TAG SEQADV 6P2T SER A -16 UNP P42981 EXPRESSION TAG SEQADV 6P2T HIS A -15 UNP P42981 EXPRESSION TAG SEQADV 6P2T HIS A -14 UNP P42981 EXPRESSION TAG SEQADV 6P2T HIS A -13 UNP P42981 EXPRESSION TAG SEQADV 6P2T HIS A -12 UNP P42981 EXPRESSION TAG SEQADV 6P2T HIS A -11 UNP P42981 EXPRESSION TAG SEQADV 6P2T HIS A -10 UNP P42981 EXPRESSION TAG SEQADV 6P2T SER A -9 UNP P42981 EXPRESSION TAG SEQADV 6P2T SER A -8 UNP P42981 EXPRESSION TAG SEQADV 6P2T GLU A -7 UNP P42981 EXPRESSION TAG SEQADV 6P2T ASN A -6 UNP P42981 EXPRESSION TAG SEQADV 6P2T LEU A -5 UNP P42981 EXPRESSION TAG SEQADV 6P2T TYR A -4 UNP P42981 EXPRESSION TAG SEQADV 6P2T PHE A -3 UNP P42981 EXPRESSION TAG SEQADV 6P2T GLN A -2 UNP P42981 EXPRESSION TAG SEQADV 6P2T GLY A -1 UNP P42981 EXPRESSION TAG SEQADV 6P2T HIS A 0 UNP P42981 EXPRESSION TAG SEQADV 6P2T ARG A 172 UNP P42981 GLN 172 CONFLICT SEQRES 1 A 256 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLU SEQRES 2 A 256 ASN LEU TYR PHE GLN GLY HIS MET TYR ASN ALA ASP VAL SEQRES 3 A 256 LEU ALA PHE GLY ALA HIS SER ASP ASP VAL GLU ILE GLY SEQRES 4 A 256 MET GLY GLY THR ILE ALA LYS PHE VAL LYS GLN GLU LYS SEQRES 5 A 256 LYS VAL MET ILE CYS ASP LEU THR GLU ALA GLU LEU SER SEQRES 6 A 256 SER ASN GLY THR VAL SER LEU ARG LYS GLU GLU ALA ALA SEQRES 7 A 256 GLU ALA ALA ARG ILE LEU GLY ALA ASP LYS ARG ILE GLN SEQRES 8 A 256 LEU THR LEU PRO ASP ARG GLY LEU ILE MET SER ASP GLN SEQRES 9 A 256 ALA ILE ARG SER ILE VAL THR VAL ILE ARG ILE CYS ARG SEQRES 10 A 256 PRO LYS ALA VAL PHE MET PRO TYR LYS LYS ASP ARG HIS SEQRES 11 A 256 PRO ASP HIS GLY ASN ALA ALA ALA LEU VAL GLU GLU ALA SEQRES 12 A 256 ILE PHE SER ALA GLY ILE HIS LYS TYR LYS ASP GLU LYS SEQRES 13 A 256 SER LEU PRO ALA HIS LYS VAL SER LYS VAL TYR TYR TYR SEQRES 14 A 256 MET ILE ASN GLY PHE HIS GLN PRO ASP PHE VAL ILE ASP SEQRES 15 A 256 ILE SER ASP THR ILE GLU ALA LYS LYS ARG SER LEU ASN SEQRES 16 A 256 ALA TYR LYS SER GLN PHE ILE PRO SER LYS ASP SER VAL SEQRES 17 A 256 SER THR PRO LEU THR ASN GLY TYR ILE GLU ILE VAL GLU SEQRES 18 A 256 ALA ARG GLU LYS LEU TYR GLY LYS GLU ALA GLY VAL GLU SEQRES 19 A 256 TYR ALA GLU GLY PHE PHE SER LYS ARG MET LEU MET LEU SEQRES 20 A 256 ASP HIS ASP VAL LEU GLY GLY GLU GLN HET ZN A 301 1 HET CIT A 302 13 HET CIT A 303 13 HET NA A 304 1 HETNAM ZN ZINC ION HETNAM CIT CITRIC ACID HETNAM NA SODIUM ION FORMUL 2 ZN ZN 2+ FORMUL 3 CIT 2(C6 H8 O7) FORMUL 5 NA NA 1+ FORMUL 6 HOH *164(H2 O) HELIX 1 AA1 ASP A 14 GLN A 30 1 17 HELIX 2 AA2 THR A 49 GLY A 65 1 17 HELIX 3 AA3 SER A 82 ARG A 97 1 16 HELIX 4 AA4 HIS A 110 GLY A 128 1 19 HELIX 5 AA5 THR A 166 ALA A 176 1 11 HELIX 6 AA6 TYR A 177 ILE A 182 1 6 HELIX 7 AA7 GLY A 195 ALA A 211 1 17 SHEET 1 AA1 7 LYS A 68 GLN A 71 0 SHEET 2 AA1 7 VAL A 34 ASP A 38 1 N ILE A 36 O ILE A 70 SHEET 3 AA1 7 VAL A 6 GLY A 10 1 N VAL A 6 O MET A 35 SHEET 4 AA1 7 ALA A 100 PRO A 104 1 O PHE A 102 N PHE A 9 SHEET 5 AA1 7 LYS A 145 TYR A 149 1 O TYR A 147 N VAL A 101 SHEET 6 AA1 7 ALA A 216 PHE A 220 -1 O PHE A 220 N TYR A 148 SHEET 7 AA1 7 PHE A 159 ASP A 162 -1 N PHE A 159 O PHE A 219 LINK ND1 HIS A 12 ZN ZN A 301 1555 1555 2.02 LINK OD1 ASP A 15 ZN ZN A 301 1555 1555 1.89 LINK OD2 ASP A 15 ZN ZN A 301 1555 1555 2.69 LINK NE2 HIS A 113 ZN ZN A 301 1555 1555 2.15 LINK O SER A 221 NA NA A 304 1555 1555 2.77 LINK O ARG A 223 NA NA A 304 1555 1555 2.88 LINK ZN ZN A 301 O HOH A 454 1555 1555 1.97 LINK NA NA A 304 O HOH A 447 1555 12765 2.76 LINK NA NA A 304 O HOH A 469 1555 1555 2.98 LINK NA NA A 304 O HOH A 509 1555 1555 2.17 LINK NA NA A 304 O HOH A 531 1555 1555 2.87 SITE 1 AC1 4 HIS A 12 ASP A 15 HIS A 113 HOH A 454 SITE 1 AC2 15 LEU A 44 SER A 45 SER A 46 ARG A 109 SITE 2 AC2 15 HIS A 110 PHE A 125 ILE A 129 LEU A 192 SITE 3 AC2 15 HOH A 401 HOH A 419 HOH A 426 HOH A 442 SITE 4 AC2 15 HOH A 456 HOH A 462 HOH A 491 SITE 1 AC3 8 LYS A 29 ASP A 165 THR A 166 ILE A 167 SITE 2 AC3 8 GLU A 168 ALA A 169 ARG A 172 HOH A 417 SITE 1 AC4 7 SER A 221 LYS A 222 ARG A 223 HOH A 447 SITE 2 AC4 7 HOH A 469 HOH A 509 HOH A 531 CRYST1 98.538 98.538 184.877 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010148 0.005859 0.000000 0.00000 SCALE2 0.000000 0.011718 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005409 0.00000