HEADER DNA 26-MAY-19 6P45 TITLE CRYSTAL STRUCTURE OF THE G-QUADRUPLEX FORMED BY (TGGGT)4 IN COMPLEX TITLE 2 WITH N-METHYLMESOPORPHRYIN IX COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA (5'- COMPND 3 D(P*TP*GP*GP*GP*TP*TP*GP*GP*GP*TP*TP*GP*GP*GP*TP*TP*GP*GP*GP*T)-3'); COMPND 4 CHAIN: A, B; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: TETRAHYMENA THERMOPHILA; SOURCE 4 ORGANISM_TAXID: 5911 KEYWDS PARALLEL G-QUADRUPLEX, N-METHYMESOPORPHYRIN IX, END-STACKING, TT KEYWDS 2 PROPELLER LOOPS, DNA EXPDTA X-RAY DIFFRACTION AUTHOR L.A.YATSUNYK,L.Y.LIN REVDAT 3 11-OCT-23 6P45 1 REMARK REVDAT 2 25-NOV-20 6P45 1 JRNL LINK REVDAT 1 27-MAY-20 6P45 0 JRNL AUTH L.Y.LIN,S.MCCARTHY,B.M.POWELL,Y.MANURUNG,I.M.XIANG,W.L.DEAN, JRNL AUTH 2 B.CHAIRES,L.A.YATSUNYK JRNL TITL BIOPHYSICAL AND X-RAY STRUCTURAL STUDIES OF THE (GGGTT)3GGG JRNL TITL 2 G-QUADRUPLEX IN COMPLEX WITH N-METHYL MESOPORPHYRIN IX. JRNL REF PLOS ONE V. 15 41513 2020 JRNL REFN ESSN 1932-6203 JRNL PMID 33206666 JRNL DOI 10.1371/JOURNAL.PONE.0241513 REMARK 2 REMARK 2 RESOLUTION. 2.34 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.34 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 51.34 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.400 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 5355 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.990 REMARK 3 FREE R VALUE TEST SET COUNT : 535 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 51.3503 - 3.7129 1.00 1233 136 0.1834 0.2081 REMARK 3 2 3.7129 - 2.9471 0.99 1213 129 0.1979 0.2103 REMARK 3 3 2.9471 - 2.5746 1.00 1199 141 0.2800 0.3188 REMARK 3 4 2.5746 - 2.3392 0.97 1175 129 0.2689 0.2950 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.080 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 71.28 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 957 REMARK 3 ANGLE : 1.744 1479 REMARK 3 CHIRALITY : 0.095 149 REMARK 3 PLANARITY : 0.008 42 REMARK 3 DIHEDRAL : 36.511 384 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -18.7873 1.5280 0.6068 REMARK 3 T TENSOR REMARK 3 T11: 0.4032 T22: 0.4114 REMARK 3 T33: 0.6725 T12: 0.0230 REMARK 3 T13: 0.0241 T23: 0.0935 REMARK 3 L TENSOR REMARK 3 L11: 10.8955 L22: 8.0630 REMARK 3 L33: 11.8098 L12: -2.4376 REMARK 3 L13: -0.7208 L23: 2.8575 REMARK 3 S TENSOR REMARK 3 S11: -0.4673 S12: 0.0675 S13: -0.2748 REMARK 3 S21: 0.5059 S22: 0.3469 S23: 0.5035 REMARK 3 S31: 0.6098 S32: -0.2433 S33: 0.0847 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6P45 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-MAY-19. REMARK 100 THE DEPOSITION ID IS D_1000235723. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-MAR-18 REMARK 200 TEMPERATURE (KELVIN) : 196 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9791 REMARK 200 MONOCHROMATOR : CRYO-COOLED DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 5377 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.339 REMARK 200 RESOLUTION RANGE LOW (A) : 51.340 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 9.500 REMARK 200 R MERGE (I) : 0.07800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.34 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.4 REMARK 200 DATA REDUNDANCY IN SHELL : 6.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4FXM REMARK 200 REMARK 200 REMARK: HEXAGONAL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3.5 M LITHIUM CHLORIDE, 0.03 M REMARK 280 MAGNESIUM CHLORIDE, 0.05 M HEPES SODIUM PH 7.0, VAPOR DIFFUSION, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 31.66600 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 31.66600 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 31.66600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 DT A 1 O5' C5' N1 C2 O2 N3 C4 REMARK 470 DT A 1 O4 C5 C7 C6 REMARK 470 DT A 15 N1 C2 O2 N3 C4 O4 C5 REMARK 470 DT A 15 C7 C6 REMARK 470 DG A 17 OP1 REMARK 470 DT A 20 N1 C2 O2 N3 C4 O4 C5 REMARK 470 DT A 20 C7 C6 REMARK 470 DT B 1 O5' C5' N1 C2 O2 N3 C4 REMARK 470 DT B 1 O4 C5 C7 C6 REMARK 470 DT B 16 N1 C2 O2 N3 C4 O4 C5 REMARK 470 DT B 16 C7 C6 REMARK 470 DT B 20 N1 C2 O2 N3 C4 O4 C5 REMARK 470 DT B 20 C7 C6 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DG B 8 O3' DG B 8 C3' -0.042 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 MMP A 104 REMARK 610 MMP B 103 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 102 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DG A 2 O6 REMARK 620 2 DG A 3 O6 77.0 REMARK 620 3 DG A 7 O6 71.8 93.8 REMARK 620 4 DG A 8 O6 133.0 72.2 75.7 REMARK 620 5 DG A 12 O6 104.1 154.1 63.0 90.0 REMARK 620 6 DG A 13 O6 154.2 112.3 128.9 72.1 78.2 REMARK 620 7 DG A 17 O6 67.5 131.4 104.9 155.5 69.6 90.1 REMARK 620 8 DG A 18 O6 90.5 78.0 162.0 116.0 127.4 69.1 70.5 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 103 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DG A 2 O6 REMARK 620 2 DG A 7 O6 72.9 REMARK 620 3 DG A 12 O6 107.5 64.2 REMARK 620 4 DG A 17 O6 66.7 102.1 68.8 REMARK 620 5 DG B 2 O6 74.0 140.7 148.0 83.6 REMARK 620 6 DG B 7 O6 141.8 144.1 89.9 89.9 73.6 REMARK 620 7 DG B 12 O6 140.1 80.3 85.8 149.6 114.0 73.0 REMARK 620 8 DG B 17 O6 79.4 84.3 142.8 141.4 69.2 107.2 68.9 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 101 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DG A 3 O6 REMARK 620 2 DG A 4 O6 80.2 REMARK 620 3 DG A 8 O6 69.8 94.0 REMARK 620 4 DG A 9 O6 134.6 76.2 73.8 REMARK 620 5 DG A 13 O6 107.9 157.3 70.2 83.5 REMARK 620 6 DG A 14 O6 151.8 119.6 123.8 72.8 62.2 REMARK 620 7 DG A 18 O6 70.7 138.3 102.8 145.0 63.3 81.6 REMARK 620 8 DG A 19 O6 94.2 76.6 162.8 116.9 122.5 73.3 76.4 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K B 101 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DG B 2 O6 REMARK 620 2 DG B 3 O6 78.6 REMARK 620 3 DG B 7 O6 71.7 91.9 REMARK 620 4 DG B 8 O6 132.9 71.7 73.6 REMARK 620 5 DG B 12 O6 109.2 156.9 71.1 88.2 REMARK 620 6 DG B 13 O6 152.2 110.3 132.0 74.0 73.4 REMARK 620 7 DG B 17 O6 70.2 132.5 110.4 153.7 69.7 85.7 REMARK 620 8 DG B 18 O6 90.0 71.8 157.9 113.3 128.4 69.2 73.2 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K B 102 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DG B 3 O6 REMARK 620 2 DG B 4 O6 73.1 REMARK 620 3 DG B 8 O6 68.2 88.6 REMARK 620 4 DG B 9 O6 133.3 78.9 74.6 REMARK 620 5 DG B 13 O6 104.9 157.9 70.8 87.8 REMARK 620 6 DG B 14 O6 151.5 124.1 128.8 75.0 67.8 REMARK 620 7 DG B 18 O6 66.9 129.9 102.9 151.2 65.0 85.7 REMARK 620 8 DG B 19 O6 86.7 78.2 154.3 123.2 123.9 76.5 70.7 REMARK 620 N 1 2 3 4 5 6 7 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K A 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K A 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K A 103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MMP A 104 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K B 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K B 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MMP B 103 DBREF 6P45 A 1 20 PDB 6P45 6P45 1 20 DBREF 6P45 B 1 20 PDB 6P45 6P45 1 20 SEQRES 1 A 20 DT DG DG DG DT DT DG DG DG DT DT DG DG SEQRES 2 A 20 DG DT DT DG DG DG DT SEQRES 1 B 20 DT DG DG DG DT DT DG DG DG DT DT DG DG SEQRES 2 B 20 DG DT DT DG DG DG DT HET K A 101 1 HET K A 102 1 HET K A 103 1 HET MMP A 104 35 HET K B 101 1 HET K B 102 1 HET MMP B 103 35 HETNAM K POTASSIUM ION HETNAM MMP N-METHYLMESOPORPHYRIN FORMUL 3 K 5(K 1+) FORMUL 6 MMP 2(C35 H40 N4 O4) FORMUL 10 HOH *4(H2 O) LINK O6 DG A 2 K K A 102 1555 1555 2.98 LINK O6 DG A 2 K K A 103 1555 1555 2.92 LINK O6 DG A 3 K K A 101 1555 1555 2.80 LINK O6 DG A 3 K K A 102 1555 1555 2.71 LINK O6 DG A 4 K K A 101 1555 1555 2.54 LINK O6 DG A 7 K K A 102 1555 1555 2.81 LINK O6 DG A 7 K K A 103 1555 1555 2.79 LINK O6 DG A 8 K K A 101 1555 1555 2.71 LINK O6 DG A 8 K K A 102 1555 1555 2.64 LINK O6 DG A 9 K K A 101 1555 1555 2.78 LINK O6 DG A 12 K K A 102 1555 1555 2.79 LINK O6 DG A 12 K K A 103 1555 1555 2.72 LINK O6 DG A 13 K K A 101 1555 1555 2.83 LINK O6 DG A 13 K K A 102 1555 1555 2.77 LINK O6 DG A 14 K K A 101 1555 1555 2.88 LINK O6 DG A 17 K K A 102 1555 1555 2.69 LINK O6 DG A 17 K K A 103 1555 1555 2.81 LINK O6 DG A 18 K K A 101 1555 1555 3.03 LINK O6 DG A 18 K K A 102 1555 1555 2.66 LINK O6 DG A 19 K K A 101 1555 1555 2.88 LINK K K A 103 O6 DG B 2 1555 1555 2.84 LINK K K A 103 O6 DG B 7 1555 1555 2.71 LINK K K A 103 O6 DG B 12 1555 1555 2.91 LINK K K A 103 O6 DG B 17 1555 1555 2.97 LINK O6 DG B 2 K K B 101 1555 1555 2.92 LINK O6 DG B 3 K K B 101 1555 1555 2.72 LINK O6 DG B 3 K K B 102 1555 1555 2.83 LINK O6 DG B 4 K K B 102 1555 1555 2.66 LINK O6 DG B 7 K K B 101 1555 1555 2.75 LINK O6 DG B 8 K K B 101 1555 1555 2.74 LINK O6 DG B 8 K K B 102 1555 1555 2.88 LINK O6 DG B 9 K K B 102 1555 1555 2.76 LINK O6 DG B 12 K K B 101 1555 1555 2.99 LINK O6 DG B 13 K K B 101 1555 1555 2.73 LINK O6 DG B 13 K K B 102 1555 1555 2.81 LINK O6 DG B 14 K K B 102 1555 1555 2.71 LINK O6 DG B 17 K K B 101 1555 1555 2.81 LINK O6 DG B 18 K K B 101 1555 1555 2.65 LINK O6 DG B 18 K K B 102 1555 1555 2.88 LINK O6 DG B 19 K K B 102 1555 1555 2.71 SITE 1 AC1 9 DG A 3 DG A 4 DG A 8 DG A 9 SITE 2 AC1 9 DG A 13 DG A 14 DG A 18 DG A 19 SITE 3 AC1 9 K A 102 SITE 1 AC2 10 DG A 2 DG A 3 DG A 7 DG A 8 SITE 2 AC2 10 DG A 12 DG A 13 DG A 17 DG A 18 SITE 3 AC2 10 K A 101 K A 103 SITE 1 AC3 10 DG A 2 DG A 7 DG A 12 DG A 17 SITE 2 AC3 10 K A 102 DG B 2 DG B 7 DG B 12 SITE 3 AC3 10 DG B 17 K B 101 SITE 1 AC4 5 DG A 9 DT A 10 DT A 11 DG A 14 SITE 2 AC4 5 DG A 19 SITE 1 AC5 10 K A 103 DG B 2 DG B 3 DG B 7 SITE 2 AC5 10 DG B 8 DG B 12 DG B 13 DG B 17 SITE 3 AC5 10 DG B 18 K B 102 SITE 1 AC6 9 DG B 3 DG B 4 DG B 8 DG B 9 SITE 2 AC6 9 DG B 13 DG B 14 DG B 18 DG B 19 SITE 3 AC6 9 K B 101 SITE 1 AC7 6 DG B 4 DG B 9 DT B 10 DT B 11 SITE 2 AC7 6 DG B 14 DG B 19 CRYST1 59.280 59.280 63.332 90.00 90.00 120.00 P 63 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016869 0.009739 0.000000 0.00000 SCALE2 0.000000 0.019479 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015790 0.00000