HEADER VIRAL PROTEIN, HYDROLASE 04-JUN-19 6P6S TITLE HCV NS3/4A PROTEASE DOMAIN OF GENOTYPE 3A IN COMPLEX WITH GLECAPREVIR COMPND MOL_ID: 1; COMPND 2 MOLECULE: NON-STRUCTURAL PROTEIN 4A,SERINE PROTEASE NS3; COMPND 3 CHAIN: A; COMPND 4 EC: 3.4.21.98,3.6.1.15,3.6.4.13; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HEPATITIS C VIRUS GENOTYPE 3A (ISOLATE NZL1); SOURCE 3 ORGANISM_COMMON: HCV; SOURCE 4 ORGANISM_TAXID: 356415; SOURCE 5 STRAIN: ISOLATE NZL1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HCV NS3/4A PROTEASE HCV PROTEASE DOMAIN GLECAPREVIR, GLE GENOTYPE 3A, KEYWDS 2 VIRAL PROTEIN, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR J.TIMM,C.A.SCHIFFER REVDAT 2 11-OCT-23 6P6S 1 COMPND HETNAM REVDAT 1 10-JUN-20 6P6S 0 JRNL AUTH J.TIMM,K.KOSOVRASTI,M.HENES,F.LEIDNER,S.HOU,N.KURT-YILMAZ, JRNL AUTH 2 C.A.SCHIFFER JRNL TITL MOLECULAR MECHANISM OF PAN-GENOTYPIC HCV NS3/4A PROTEASE JRNL TITL 2 INHIBITION BY GLECAPREVIR AND CHARACTERIZATION OF JRNL TITL 3 GENOTYPE-SPECIFIC STRUCTURAL DIFFERENCES JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.14_3211: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.15 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 13303 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.940 REMARK 3 FREE R VALUE TEST SET COUNT : 1150 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.1588 - 3.9985 1.00 2769 144 0.1727 0.1883 REMARK 3 2 3.9985 - 3.1743 1.00 2789 147 0.1812 0.2091 REMARK 3 3 3.1743 - 2.7732 1.00 2760 144 0.2133 0.2384 REMARK 3 4 2.7732 - 2.5198 1.00 2786 148 0.2354 0.2864 REMARK 3 5 2.5198 - 2.3392 1.00 2752 142 0.2556 0.3161 REMARK 3 6 2.3392 - 2.2013 1.00 2793 146 0.2521 0.2887 REMARK 3 7 2.2013 - 2.0911 1.00 2747 139 0.2789 0.2958 REMARK 3 8 2.0911 - 2.0000 1.00 2756 140 0.3061 0.3335 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.260 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.420 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1512 REMARK 3 ANGLE : 0.874 2083 REMARK 3 CHIRALITY : 0.050 242 REMARK 3 PLANARITY : 0.006 268 REMARK 3 DIHEDRAL : 17.375 872 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6P6S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-JUN-19. REMARK 100 THE DEPOSITION ID IS D_1000242012. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-JUN-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0332 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13492 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 36.153 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 11.30 REMARK 200 R MERGE (I) : 0.12360 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.9800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.74790 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5VOJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES PH 6.5 5% (NH4)2SO4 10 MM REMARK 280 MG2SO4 16% PEG 3350 3 MM GLECAPREVIR, VAPOR DIFFUSION, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 133.88600 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 18.24350 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 18.24350 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 66.94300 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 18.24350 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 18.24350 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 200.82900 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 18.24350 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 18.24350 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 66.94300 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 18.24350 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 18.24350 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 200.82900 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 133.88600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 980 REMARK 465 SER A 981 REMARK 465 HIS A 982 REMARK 465 MET A 983 REMARK 465 ALA A 984 REMARK 465 SER A 985 REMARK 465 HIS A 986 REMARK 465 LYS A 987 REMARK 465 LYS A 988 REMARK 465 LYS A 989 REMARK 465 PRO A 1182 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A1004 OG1 CG2 REMARK 470 GLU A1013 CG CD OE1 OE2 REMARK 470 GLU A1014 CG CD OE1 OE2 REMARK 470 GLN A1017 CG CD OE1 NE2 REMARK 470 GLU A1018 CG CD OE1 OE2 REMARK 470 GLN A1021 CG CD OE1 NE2 REMARK 470 ARG A1024 CG CD NE CZ NH1 NH2 REMARK 470 ASP A1025 CG OD1 OD2 REMARK 470 LYS A1026 CG CD CE NZ REMARK 470 LYS A1068 CG CD CE NZ REMARK 470 LEU A1072 CG CD1 CD2 REMARK 470 LYS A1092 CG CD CE NZ REMARK 470 LYS A1165 CD CE NZ REMARK 470 GLN A1178 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1304 O HOH A 1368 2.06 REMARK 500 O THR A 1004 O HOH A 1302 2.07 REMARK 500 OG SER A 1128 O HOH A 1303 2.11 REMARK 500 O ALA A 1091 O HOH A 1304 2.11 REMARK 500 O THR A 1174 O HOH A 1305 2.15 REMARK 500 NH2 ARG A 1130 O HOH A 1306 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1324 O HOH A 1348 6465 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A1003 -168.06 -76.00 REMARK 500 PHE A1043 -168.47 -161.22 REMARK 500 THR A1177 41.17 -86.11 REMARK 500 ARG A1180 90.28 -66.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1205 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A1097 SG REMARK 620 2 CYS A1099 SG 87.2 REMARK 620 3 CYS A1145 SG 107.7 116.4 REMARK 620 4 HOH A1341 O 110.5 109.0 120.8 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue O31 A 1201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 1205 DBREF 6P6S A 990 1000 UNP Q81258 POLG_HCVNZ 1684 1694 DBREF 6P6S A 1004 1182 UNP Q81258 POLG_HCVNZ 1036 1214 SEQADV 6P6S GLY A 980 UNP Q81258 EXPRESSION TAG SEQADV 6P6S SER A 981 UNP Q81258 EXPRESSION TAG SEQADV 6P6S HIS A 982 UNP Q81258 EXPRESSION TAG SEQADV 6P6S MET A 983 UNP Q81258 EXPRESSION TAG SEQADV 6P6S ALA A 984 UNP Q81258 EXPRESSION TAG SEQADV 6P6S SER A 985 UNP Q81258 EXPRESSION TAG SEQADV 6P6S HIS A 986 UNP Q81258 EXPRESSION TAG SEQADV 6P6S LYS A 987 UNP Q81258 EXPRESSION TAG SEQADV 6P6S LYS A 988 UNP Q81258 EXPRESSION TAG SEQADV 6P6S LYS A 989 UNP Q81258 EXPRESSION TAG SEQADV 6P6S ARG A 997 UNP Q81258 HIS 1691 ENGINEERED MUTATION SEQADV 6P6S ASN A 999 UNP Q81258 GLU 1693 ENGINEERED MUTATION SEQADV 6P6S SER A 1001 UNP Q81258 LINKER SEQADV 6P6S GLY A 1002 UNP Q81258 LINKER SEQADV 6P6S ASP A 1003 UNP Q81258 LINKER SEQADV 6P6S GLU A 1013 UNP Q81258 LEU 1045 ENGINEERED MUTATION SEQADV 6P6S GLU A 1014 UNP Q81258 LEU 1046 ENGINEERED MUTATION SEQADV 6P6S GLN A 1017 UNP Q81258 ILE 1049 ENGINEERED MUTATION SEQADV 6P6S GLU A 1018 UNP Q81258 VAL 1050 ENGINEERED MUTATION SEQADV 6P6S GLN A 1021 UNP Q81258 LEU 1053 ENGINEERED MUTATION SEQADV 6P6S TYR A 1134 UNP Q81258 CYS 1166 ENGINEERED MUTATION SEQADV 6P6S SER A 1159 UNP Q81258 CYS 1191 ENGINEERED MUTATION SEQRES 1 A 203 GLY SER HIS MET ALA SER HIS LYS LYS LYS GLY CYS VAL SEQRES 2 A 203 VAL ILE VAL GLY ARG ILE ASN LEU SER GLY ASP THR ALA SEQRES 3 A 203 TYR ALA GLN GLN THR ARG GLY GLU GLU GLY THR GLN GLU SEQRES 4 A 203 THR SER GLN THR GLY ARG ASP LYS ASN VAL VAL THR GLY SEQRES 5 A 203 GLU VAL GLN VAL LEU SER THR ALA THR GLN THR PHE LEU SEQRES 6 A 203 GLY THR THR VAL GLY GLY VAL ILE TRP THR VAL TYR HIS SEQRES 7 A 203 GLY ALA GLY SER ARG THR LEU ALA GLY ALA LYS HIS PRO SEQRES 8 A 203 ALA LEU GLN MET TYR THR ASN VAL ASP GLN ASP LEU VAL SEQRES 9 A 203 GLY TRP PRO ALA PRO PRO GLY ALA LYS SER LEU GLU PRO SEQRES 10 A 203 CYS ALA CYS GLY SER SER ASP LEU TYR LEU VAL THR ARG SEQRES 11 A 203 ASP ALA ASP VAL ILE PRO ALA ARG ARG ARG GLY ASP SER SEQRES 12 A 203 THR ALA SER LEU LEU SER PRO ARG PRO LEU ALA TYR LEU SEQRES 13 A 203 LYS GLY SER SER GLY GLY PRO VAL MET CYS PRO SER GLY SEQRES 14 A 203 HIS VAL ALA GLY ILE PHE ARG ALA ALA VAL SER THR ARG SEQRES 15 A 203 GLY VAL ALA LYS SER LEU GLN PHE ILE PRO VAL GLU THR SEQRES 16 A 203 LEU SER THR GLN ALA ARG SER PRO HET O31 A1201 104 HET EDO A1202 10 HET EDO A1203 10 HET EDO A1204 10 HET ZN A1205 1 HETNAM O31 (3AR,7S,10S,12R,21E,24AR)-7-TERT-BUTYL-N-[(1R,2R)-2- HETNAM 2 O31 (DIFLUOROMETHYL)-1-{[(1-METHYLCYCLOPROPYL) HETNAM 3 O31 SULFONYL]CARBAMOYL}CYCLOP ROPYL]-20,20-DIFLUORO-5,8- HETNAM 4 O31 DIOXO-2,3,3A,5,6,7,8,11,12,20,23,24A-DODECAHYDRO-1H, HETNAM 5 O31 10H-9,12-METHANOCYCLOPENTA[18,19][1,10,17, 3, HETNAM 6 O31 6]TRIOXADIAZACYCLONONADECINO[11,12-B]QUINOXALINE-10- HETNAM 7 O31 CARBOXAMIDE HETNAM EDO 1,2-ETHANEDIOL HETNAM ZN ZINC ION HETSYN O31 GLECAPREVIR HETSYN EDO ETHYLENE GLYCOL FORMUL 2 O31 C38 H46 F4 N6 O9 S FORMUL 3 EDO 3(C2 H6 O2) FORMUL 6 ZN ZN 2+ FORMUL 7 HOH *92(H2 O) HELIX 1 AA1 GLY A 1012 GLY A 1023 1 12 HELIX 2 AA2 TYR A 1056 GLY A 1060 1 5 HELIX 3 AA3 ALA A 1133 LEU A 1135 5 3 HELIX 4 AA4 VAL A 1172 THR A 1177 1 6 SHEET 1 AA1 3 ALA A1007 GLN A1009 0 SHEET 2 AA1 3 CYS A 991 ILE A 998 -1 N ARG A 997 O GLN A1008 SHEET 3 AA1 3 THR A1063 LEU A1064 1 O THR A1063 N VAL A 992 SHEET 1 AA2 7 ALA A1007 GLN A1009 0 SHEET 2 AA2 7 CYS A 991 ILE A 998 -1 N ARG A 997 O GLN A1008 SHEET 3 AA2 7 VAL A1033 SER A1037 -1 O VAL A1033 N ILE A 998 SHEET 4 AA2 7 THR A1042 VAL A1048 -1 O PHE A1043 N LEU A1036 SHEET 5 AA2 7 VAL A1051 VAL A1055 -1 O TRP A1053 N THR A1046 SHEET 6 AA2 7 LEU A1082 PRO A1086 -1 O TRP A1085 N ILE A1052 SHEET 7 AA2 7 TYR A1075 ASN A1077 -1 N ASN A1077 O LEU A1082 SHEET 1 AA3 7 ASP A1103 VAL A1107 0 SHEET 2 AA3 7 VAL A1113 ARG A1118 -1 O ALA A1116 N LEU A1104 SHEET 3 AA3 7 THR A1123 PRO A1131 -1 O SER A1125 N ARG A1117 SHEET 4 AA3 7 VAL A1163 PRO A1171 -1 O LEU A1167 N ALA A1124 SHEET 5 AA3 7 VAL A1150 THR A1160 -1 N VAL A1158 O LYS A1165 SHEET 6 AA3 7 PRO A1142 MET A1144 -1 N VAL A1143 O GLY A1152 SHEET 7 AA3 7 ASP A1103 VAL A1107 -1 N TYR A1105 O MET A1144 LINK SG CYS A1097 ZN ZN A1205 1555 1555 2.42 LINK SG CYS A1099 ZN ZN A1205 1555 1555 2.44 LINK SG CYS A1145 ZN ZN A1205 1555 1555 2.44 LINK ZN ZN A1205 O HOH A1341 1555 1555 2.17 SITE 1 AC1 24 GLN A1041 THR A1042 PHE A1043 TYR A1056 SITE 2 AC1 24 HIS A1057 ASP A1081 ARG A1118 ARG A1119 SITE 3 AC1 24 GLY A1120 ASP A1121 LEU A1132 LEU A1135 SITE 4 AC1 24 LYS A1136 GLY A1137 SER A1139 PHE A1154 SITE 5 AC1 24 ARG A1155 ALA A1156 ALA A1157 VAL A1158 SITE 6 AC1 24 HOH A1312 HOH A1323 HOH A1340 HOH A1352 SITE 1 AC2 6 VAL A1113 ARG A1130 LEU A1132 LYS A1136 SITE 2 AC2 6 HOH A1337 HOH A1358 SITE 1 AC3 2 GLY A1012 GLY A1015 SITE 1 AC4 5 GLN A1080 ARG A1117 ARG A1155 PRO A1171 SITE 2 AC4 5 HOH A1372 SITE 1 AC5 4 CYS A1097 CYS A1099 CYS A1145 HOH A1341 CRYST1 36.487 36.487 267.772 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.027407 0.000000 0.000000 0.00000 SCALE2 0.000000 0.027407 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003735 0.00000