HEADER VIRAL PROTEIN, HYDROLASE 04-JUN-19 6P6Z TITLE HCV NS3/4A PROTEASE DOMAIN OF GENOTYPE 4A WITH AN EXTENDED LINKER IN TITLE 2 COMPLEX WITH GLECAPREVIR COMPND MOL_ID: 1; COMPND 2 MOLECULE: NON-STRUCTURAL PROTEIN 4A,SERINE PROTEASE NS3; COMPND 3 CHAIN: A; COMPND 4 EC: 3.4.21.98,3.6.1.15,3.6.4.13; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HEPATITIS C VIRUS GENOTYPE 4A (ISOLATE ED43); SOURCE 3 ORGANISM_COMMON: HCV; SOURCE 4 ORGANISM_TAXID: 356418; SOURCE 5 STRAIN: ISOLATE ED43; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HCV NS3/4A PROTEASE HCV PROTEASE DOMAIN GLECAPREVIR, GLE GENOTYPE 4A, KEYWDS 2 VIRAL PROTEIN, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR J.TIMM,C.A.SCHIFFER REVDAT 2 11-OCT-23 6P6Z 1 COMPND HETNAM REVDAT 1 10-JUN-20 6P6Z 0 JRNL AUTH J.TIMM,K.KOSOVRASTI,M.HENES,F.LEIDNER,S.HOU,N.KURT-YILMAZ, JRNL AUTH 2 C.A.SCHIFFER JRNL TITL MOLECULAR MECHANISM OF PAN-GENOTYPIC HCV NS3/4A PROTEASE JRNL TITL 2 INHIBITION BY GLECAPREVIR AND CHARACTERIZATION OF JRNL TITL 3 GENOTYPE-SPECIFIC STRUCTURAL DIFFERENCES JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.29 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.14_3211: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.29 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.42 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.8 REMARK 3 NUMBER OF REFLECTIONS : 7364 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.242 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.970 REMARK 3 FREE R VALUE TEST SET COUNT : 366 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 27.4225 - 3.3073 0.95 2428 128 0.1662 0.2241 REMARK 3 2 3.3073 - 2.6258 0.96 2327 125 0.2122 0.2505 REMARK 3 3 2.6258 - 2.2941 0.93 2243 113 0.2426 0.2867 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.450 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 1222 REMARK 3 ANGLE : 0.768 1685 REMARK 3 CHIRALITY : 0.050 198 REMARK 3 PLANARITY : 0.004 211 REMARK 3 DIHEDRAL : 14.236 700 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6P6Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-JUN-19. REMARK 100 THE DEPOSITION ID IS D_1000242017. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-AUG-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 7364 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.294 REMARK 200 RESOLUTION RANGE LOW (A) : 27.421 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.7 REMARK 200 DATA REDUNDANCY : 2.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.4400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.29 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.21700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5VOJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.53 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.94 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M NACL 0.2M HEPES PH 7.0 20% PEG REMARK 280 6000 3 MM GLECAPREVIR, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 21.95400 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 30.73050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.36900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 30.73050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 21.95400 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 30.36900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 983 REMARK 465 ALA A 984 REMARK 465 SER A 985 REMARK 465 MET A 986 REMARK 465 LYS A 987 REMARK 465 LYS A 988 REMARK 465 LYS A 989 REMARK 465 SER A 1000A REMARK 465 GLY A 1000B REMARK 465 GLY A 1000C REMARK 465 SER A 1000D REMARK 465 GLY A 1000E REMARK 465 ASP A 1000F REMARK 465 THR A 1000G REMARK 465 ALA A 1000H REMARK 465 TYR A 1000I REMARK 465 ALA A 1000J REMARK 465 GLN A 1000K REMARK 465 GLN A 1000L REMARK 465 THR A 1000M REMARK 465 ARG A 1000N REMARK 465 GLY A 1000O REMARK 465 GLU A 1000P REMARK 465 GLU A 1000Q REMARK 465 SER A 1000R REMARK 465 THR A 1000S REMARK 465 GLN A 1000T REMARK 465 GLU A 1000U REMARK 465 THR A 1000V REMARK 465 SER A 1000W REMARK 465 GLN A 1000X REMARK 465 THR A 1000Y REMARK 465 GLY A 1000Z REMARK 465 ARG A 1001A REMARK 465 ASP A 1001B REMARK 465 THR A 1001C REMARK 465 ASN A 1001D REMARK 465 GLU A 1001E REMARK 465 ASN A 1001F REMARK 465 CYS A 1001G REMARK 465 THR A 1178 REMARK 465 MET A 1179 REMARK 465 ARG A 1180 REMARK 465 SER A 1181 REMARK 465 PRO A 1182 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A1092 CG CD CE NZ REMARK 470 ARG A1161 CG CD NE CZ NH1 NH2 REMARK 470 LYS A1165 CG CD CE NZ REMARK 470 THR A1177 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH21 ARG A 997 O HOH A 1302 1.58 REMARK 500 O GLY A 990 O HOH A 1301 2.06 REMARK 500 O HOH A 1346 O HOH A 1353 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1340 O HOH A 1368 3645 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A1038 -169.01 -100.91 REMARK 500 LEU A1175 47.80 -100.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A1097 SG REMARK 620 2 CYS A1099 SG 101.6 REMARK 620 3 CYS A1145 SG 108.5 117.9 REMARK 620 4 HOH A1305 O 105.6 108.2 113.7 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 1201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue O31 A 1202 DBREF 6P6Z A 990 1000 UNP O39929 POLG_HCVED 1678 1688 DBREF 6P6Z A 1000G 1182 UNP O39929 POLG_HCVED 1030 1208 SEQADV 6P6Z MET A 983 UNP O39929 EXPRESSION TAG SEQADV 6P6Z ALA A 984 UNP O39929 EXPRESSION TAG SEQADV 6P6Z SER A 985 UNP O39929 EXPRESSION TAG SEQADV 6P6Z MET A 986 UNP O39929 EXPRESSION TAG SEQADV 6P6Z LYS A 987 UNP O39929 EXPRESSION TAG SEQADV 6P6Z LYS A 988 UNP O39929 EXPRESSION TAG SEQADV 6P6Z LYS A 989 UNP O39929 EXPRESSION TAG SEQADV 6P6Z SER A 1000A UNP O39929 LINKER SEQADV 6P6Z GLY A 1000B UNP O39929 LINKER SEQADV 6P6Z GLY A 1000C UNP O39929 LINKER SEQADV 6P6Z SER A 1000D UNP O39929 LINKER SEQADV 6P6Z GLY A 1000E UNP O39929 LINKER SEQADV 6P6Z ASP A 1000F UNP O39929 LINKER SEQADV 6P6Z GLU A 1000P UNP O39929 LEU 1039 ENGINEERED MUTATION SEQADV 6P6Z GLU A 1000Q UNP O39929 PHE 1040 ENGINEERED MUTATION SEQADV 6P6Z GLN A 1000T UNP O39929 ILE 1043 ENGINEERED MUTATION SEQADV 6P6Z GLU A 1000U UNP O39929 VAL 1044 ENGINEERED MUTATION SEQADV 6P6Z GLN A 1000X UNP O39929 LEU 1047 ENGINEERED MUTATION SEQADV 6P6Z SER A 1054 UNP O39929 THR 1080 ENGINEERED MUTATION SEQADV 6P6Z GLY A 1061 UNP O39929 ALA 1087 ENGINEERED MUTATION SEQADV 6P6Z LYS A 1092 UNP O39929 ARG 1118 ENGINEERED MUTATION SEQADV 6P6Z THR A 1095 UNP O39929 ALA 1121 ENGINEERED MUTATION SEQADV 6P6Z ALA A 1101 UNP O39929 SER 1127 ENGINEERED MUTATION SEQADV 6P6Z SER A 1102 UNP O39929 ALA 1128 ENGINEERED MUTATION SEQADV 6P6Z VAL A 1114 UNP O39929 ILE 1140 ENGINEERED MUTATION SEQADV 6P6Z THR A 1134 UNP O39929 ILE 1160 ENGINEERED MUTATION SEQADV 6P6Z VAL A 1150 UNP O39929 ARG 1176 ENGINEERED MUTATION SEQADV 6P6Z LEU A 1153 UNP O39929 ILE 1179 ENGINEERED MUTATION SEQRES 1 A 203 MET ALA SER MET LYS LYS LYS GLY SER VAL VAL ILE VAL SEQRES 2 A 203 GLY ARG VAL VAL LEU SER GLY GLY SER GLY ASP THR ALA SEQRES 3 A 203 TYR ALA GLN GLN THR ARG GLY GLU GLU SER THR GLN GLU SEQRES 4 A 203 THR SER GLN THR GLY ARG ASP THR ASN GLU ASN CYS GLY SEQRES 5 A 203 GLU VAL GLN VAL LEU SER THR ALA THR GLN SER PHE LEU SEQRES 6 A 203 GLY THR ALA VAL ASN GLY VAL MET TRP SER VAL TYR HIS SEQRES 7 A 203 GLY ALA GLY GLY LYS THR ILE SER GLY PRO LYS GLY PRO SEQRES 8 A 203 VAL ASN GLN MET TYR THR ASN VAL ASP GLN ASP LEU VAL SEQRES 9 A 203 GLY TRP PRO ALA PRO PRO GLY VAL LYS SER LEU THR PRO SEQRES 10 A 203 CYS THR CYS GLY ALA SER ASP LEU TYR LEU VAL THR ARG SEQRES 11 A 203 HIS ALA ASP VAL VAL PRO VAL ARG ARG ARG GLY ASP THR SEQRES 12 A 203 ARG GLY ALA LEU LEU SER PRO ARG PRO ILE SER THR LEU SEQRES 13 A 203 LYS GLY SER SER GLY GLY PRO LEU LEU CYS PRO MET GLY SEQRES 14 A 203 HIS VAL ALA GLY LEU PHE ARG ALA ALA VAL CYS THR ARG SEQRES 15 A 203 GLY VAL ALA LYS ALA VAL ASP PHE VAL PRO VAL GLU SER SEQRES 16 A 203 LEU GLU THR THR MET ARG SER PRO HET ZN A1201 1 HET O31 A1202 104 HETNAM ZN ZINC ION HETNAM O31 (3AR,7S,10S,12R,21E,24AR)-7-TERT-BUTYL-N-[(1R,2R)-2- HETNAM 2 O31 (DIFLUOROMETHYL)-1-{[(1-METHYLCYCLOPROPYL) HETNAM 3 O31 SULFONYL]CARBAMOYL}CYCLOP ROPYL]-20,20-DIFLUORO-5,8- HETNAM 4 O31 DIOXO-2,3,3A,5,6,7,8,11,12,20,23,24A-DODECAHYDRO-1H, HETNAM 5 O31 10H-9,12-METHANOCYCLOPENTA[18,19][1,10,17, 3, HETNAM 6 O31 6]TRIOXADIAZACYCLONONADECINO[11,12-B]QUINOXALINE-10- HETNAM 7 O31 CARBOXAMIDE HETSYN O31 GLECAPREVIR FORMUL 2 ZN ZN 2+ FORMUL 3 O31 C38 H46 F4 N6 O9 S FORMUL 4 HOH *78(H2 O) HELIX 1 AA1 TYR A 1056 GLY A 1060 1 5 HELIX 2 AA2 ILE A 1132 LYS A 1136 1 5 HELIX 3 AA3 GLU A 1173 LEU A 1175 5 3 SHEET 1 AA1 7 THR A1063 ILE A1064 0 SHEET 2 AA1 7 SER A 991 VAL A 998 1 N VAL A 992 O THR A1063 SHEET 3 AA1 7 VAL A1033 SER A1037 -1 O VAL A1033 N VAL A 998 SHEET 4 AA1 7 SER A1042 VAL A1048 -1 O PHE A1043 N LEU A1036 SHEET 5 AA1 7 VAL A1051 VAL A1055 -1 O TRP A1053 N THR A1046 SHEET 6 AA1 7 LEU A1082 PRO A1086 -1 O VAL A1083 N SER A1054 SHEET 7 AA1 7 TYR A1075 ASN A1077 -1 N ASN A1077 O LEU A1082 SHEET 1 AA2 7 ASP A1103 VAL A1107 0 SHEET 2 AA2 7 VAL A1113 ARG A1118 -1 O VAL A1116 N LEU A1104 SHEET 3 AA2 7 ARG A1123 PRO A1131 -1 O ALA A1125 N ARG A1117 SHEET 4 AA2 7 VAL A1163 PRO A1171 -1 O ALA A1164 N ARG A1130 SHEET 5 AA2 7 VAL A1150 THR A1160 -1 N ALA A1156 O ASP A1168 SHEET 6 AA2 7 PRO A1142 LEU A1144 -1 N LEU A1143 O ALA A1151 SHEET 7 AA2 7 ASP A1103 VAL A1107 -1 N TYR A1105 O LEU A1144 LINK SG CYS A1097 ZN ZN A1201 1555 1555 2.35 LINK SG CYS A1099 ZN ZN A1201 1555 1555 2.33 LINK SG CYS A1145 ZN ZN A1201 1555 1555 2.30 LINK ZN ZN A1201 O HOH A1305 1555 1555 2.09 SITE 1 AC1 4 CYS A1097 CYS A1099 CYS A1145 HOH A1305 SITE 1 AC2 28 GLN A1041 SER A1042 PHE A1043 TYR A1056 SITE 2 AC2 28 HIS A1057 GLY A1058 VAL A1078 ASP A1081 SITE 3 AC2 28 HIS A1110 ALA A1111 ASP A1112 ARG A1123 SITE 4 AC2 28 PRO A1129 ARG A1130 PRO A1131 THR A1134 SITE 5 AC2 28 LEU A1135 LYS A1136 GLY A1137 SER A1138 SITE 6 AC2 28 SER A1139 PHE A1154 ARG A1155 ALA A1156 SITE 7 AC2 28 ALA A1157 ASP A1168 HOH A1321 HOH A1346 CRYST1 43.908 60.738 61.461 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022775 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016464 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016270 0.00000