HEADER HYDROLASE 13-JUN-19 6PBC TITLE STRUCTURAL BASIS FOR THE ACTIVATION OF PLC-GAMMA ISOZYMES BY TITLE 2 PHOSPHORYLATION AND CANCER-ASSOCIATED MUTATIONS COMPND MOL_ID: 1; COMPND 2 MOLECULE: 1-PHOSPHATIDYLINOSITOL 4,5-BISPHOSPHATE PHOSPHODIESTERASE COMPND 3 GAMMA,1-PHOSPHATIDYLINOSITOL 4,5-BISPHOSPHATE PHOSPHODIESTERASE COMPND 4 GAMMA-1; COMPND 5 CHAIN: A; COMPND 6 SYNONYM: PHOSPHOINOSITIDE PHOSPHOLIPASE C-GAMMA-1,PHOSPHOLIPASE C- COMPND 7 GAMMA-1,PLC-GAMMA-1; COMPND 8 EC: 3.1.4.11,3.1.4.11; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 GENE: PLCG1, RCG_32419, PLCG1; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7111 KEYWDS 1-PHOSPHATIDYLINOSITOL 4, 5-BISPHOSPHATE PHOSPHODIESTERASE GAMMA-1, KEYWDS 2 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR N.HAJICEK,J.SONDEK REVDAT 2 13-MAR-24 6PBC 1 REMARK REVDAT 1 08-JAN-20 6PBC 0 JRNL AUTH N.HAJICEK,N.C.KEITH,E.SIRALIEV-PEREZ,B.R.S.TEMPLE,W.HUANG, JRNL AUTH 2 Q.ZHANG,T.K.HARDEN,J.SONDEK JRNL TITL STRUCTURAL BASIS FOR THE ACTIVATION OF PLC-GAMMA ISOZYMES BY JRNL TITL 2 PHOSPHORYLATION AND CANCER-ASSOCIATED MUTATIONS. JRNL REF ELIFE V. 8 2019 JRNL REFN ESSN 2050-084X JRNL PMID 31889510 JRNL DOI 10.7554/ELIFE.51700 REMARK 2 REMARK 2 RESOLUTION. 2.46 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.46 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.22 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 49437 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.130 REMARK 3 FREE R VALUE TEST SET COUNT : 3526 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.2263 - 7.1778 1.00 2000 157 0.2088 0.2347 REMARK 3 2 7.1778 - 5.7020 1.00 1914 151 0.1947 0.2123 REMARK 3 3 5.7020 - 4.9827 1.00 1875 144 0.1665 0.1991 REMARK 3 4 4.9827 - 4.5277 1.00 1870 144 0.1425 0.1796 REMARK 3 5 4.5277 - 4.2035 1.00 1831 149 0.1520 0.1797 REMARK 3 6 4.2035 - 3.9559 1.00 1857 144 0.1558 0.1871 REMARK 3 7 3.9559 - 3.7579 1.00 1833 146 0.1671 0.2160 REMARK 3 8 3.7579 - 3.5944 1.00 1847 145 0.1876 0.2393 REMARK 3 9 3.5944 - 3.4561 1.00 1834 142 0.1987 0.2419 REMARK 3 10 3.4561 - 3.3369 1.00 1837 147 0.2160 0.2679 REMARK 3 11 3.3369 - 3.2326 1.00 1816 146 0.2201 0.2516 REMARK 3 12 3.2326 - 3.1403 1.00 1843 144 0.2389 0.2920 REMARK 3 13 3.1403 - 3.0576 1.00 1794 141 0.2430 0.2940 REMARK 3 14 3.0576 - 2.9830 1.00 1837 141 0.2450 0.3113 REMARK 3 15 2.9830 - 2.9152 1.00 1825 134 0.2497 0.3400 REMARK 3 16 2.9152 - 2.8532 1.00 1789 141 0.2440 0.2696 REMARK 3 17 2.8532 - 2.7962 1.00 1852 138 0.2425 0.2974 REMARK 3 18 2.7962 - 2.7434 1.00 1796 139 0.2370 0.3423 REMARK 3 19 2.7434 - 2.6944 1.00 1835 142 0.2316 0.3054 REMARK 3 20 2.6944 - 2.6488 1.00 1772 148 0.2325 0.2898 REMARK 3 21 2.6488 - 2.6060 1.00 1849 122 0.2335 0.2770 REMARK 3 22 2.6060 - 2.5659 1.00 1836 129 0.2466 0.2915 REMARK 3 23 2.5659 - 2.5282 1.00 1767 141 0.2465 0.2937 REMARK 3 24 2.5282 - 2.4926 1.00 1844 140 0.2607 0.3047 REMARK 3 25 2.4926 - 2.4589 0.96 1758 111 0.2571 0.3213 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.300 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.020 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 34.03 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.26 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 8806 REMARK 3 ANGLE : 0.586 11916 REMARK 3 CHIRALITY : 0.043 1285 REMARK 3 PLANARITY : 0.004 1535 REMARK 3 DIHEDRAL : 14.493 5286 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6PBC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-JUN-19. REMARK 100 THE DEPOSITION ID IS D_1000241605. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-AUG-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49513 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.460 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 8.100 REMARK 200 R MERGE (I) : 0.12300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.46 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.50 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.3 REMARK 200 DATA REDUNDANCY IN SHELL : 6.80 REMARK 200 R MERGE FOR SHELL (I) : 0.69100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHASER 2.6.0, SOLVE 2.13, RESOLVE 2.15 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12.5% W/V PEG 3,350, 50 MM DI-SODIUM REMARK 280 TARTRATE, 5% V/V GLYCEROL, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 35.38300 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 114.15900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.22050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 114.15900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.38300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.22050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 18 REMARK 465 GLN A 19 REMARK 465 ALA A 20 REMARK 465 ARG A 64 REMARK 465 GLY A 65 REMARK 465 ALA A 66 REMARK 465 ASP A 67 REMARK 465 LYS A 68 REMARK 465 ASP A 165 REMARK 465 ARG A 166 REMARK 465 ASN A 167 REMARK 465 ARG A 168 REMARK 465 GLU A 169 REMARK 465 ASN A 190 REMARK 465 MET A 191 REMARK 465 ARG A 192 REMARK 465 PHE A 193 REMARK 465 LEU A 194 REMARK 465 ARG A 195 REMARK 465 GLU A 196 REMARK 465 ARG A 197 REMARK 465 LEU A 198 REMARK 465 THR A 199 REMARK 465 ASP A 200 REMARK 465 LEU A 201 REMARK 465 GLU A 202 REMARK 465 GLN A 203 REMARK 465 ARG A 204 REMARK 465 SER A 205 REMARK 465 GLY A 206 REMARK 465 LEU A 233 REMARK 465 GLU A 234 REMARK 465 THR A 235 REMARK 465 ASN A 236 REMARK 465 THR A 237 REMARK 465 LEU A 238 REMARK 465 ARG A 239 REMARK 465 THR A 240 REMARK 465 GLY A 241 REMARK 465 GLU A 242 REMARK 465 ARG A 243 REMARK 465 PRO A 244 REMARK 465 GLU A 245 REMARK 465 LEU A 246 REMARK 465 PRO A 284 REMARK 465 LEU A 285 REMARK 465 ARG A 286 REMARK 465 GLU A 287 REMARK 465 ALA A 471 REMARK 465 TYR A 472 REMARK 465 GLU A 473 REMARK 465 GLU A 474 REMARK 465 VAL A 475 REMARK 465 PRO A 476 REMARK 465 THR A 477 REMARK 465 SER A 478 REMARK 465 VAL A 479 REMARK 465 MET A 480 REMARK 465 TYR A 481 REMARK 465 SER A 482 REMARK 465 GLU A 483 REMARK 465 SER A 524 REMARK 465 SER A 525 REMARK 465 ASP A 526 REMARK 465 GLN A 527 REMARK 465 GLY A 528 REMARK 465 ASN A 529 REMARK 465 GLU A 530 REMARK 465 ASP A 531 REMARK 465 GLU A 532 REMARK 465 GLU A 533 REMARK 465 GLU A 534 REMARK 465 PRO A 535 REMARK 465 LYS A 536 REMARK 465 GLU A 537 REMARK 465 ALA A 538 REMARK 465 SER A 539 REMARK 465 GLY A 540 REMARK 465 SER A 541 REMARK 465 THR A 542 REMARK 465 GLU A 543 REMARK 465 ASP A 615 REMARK 465 ALA A 616 REMARK 465 GLY A 617 REMARK 465 THR A 618 REMARK 465 CYS A 646 REMARK 465 ASN A 647 REMARK 465 GLU A 648 REMARK 465 SER A 788 REMARK 465 GLY A 789 REMARK 465 SER A 790 REMARK 465 ALA A 933 REMARK 465 ASP A 934 REMARK 465 ALA A 935 REMARK 465 ARG A 936 REMARK 465 LEU A 937 REMARK 465 THR A 938 REMARK 465 GLU A 939 REMARK 465 GLY A 940 REMARK 465 LYS A 941 REMARK 465 MET A 942 REMARK 465 MET A 943 REMARK 465 GLU A 944 REMARK 465 ARG A 945 REMARK 465 ARG A 946 REMARK 465 LYS A 947 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 21 CG CD OE1 OE2 REMARK 470 LYS A 41 CG CD CE NZ REMARK 470 LYS A 42 CG CD CE NZ REMARK 470 GLN A 44 CG CD OE1 NE2 REMARK 470 ARG A 45 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 69 CG1 CG2 CD1 REMARK 470 GLU A 70 CG CD OE1 OE2 REMARK 470 ARG A 88 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 92 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 146 CG CD OE1 NE2 REMARK 470 SER A 163 OG REMARK 470 VAL A 164 CG1 CG2 REMARK 470 LYS A 178 CG CD CE NZ REMARK 470 ASN A 179 CG OD1 ND2 REMARK 470 ASP A 207 CG OD1 OD2 REMARK 470 CYS A 247 SG REMARK 470 GLU A 275 CG CD OE1 OE2 REMARK 470 ASP A 283 CG OD1 OD2 REMARK 470 GLU A 289 CG CD OE1 OE2 REMARK 470 LEU A 544 CG CD1 CD2 REMARK 470 GLN A 614 CG CD OE1 NE2 REMARK 470 LYS A 620 CG CD CE NZ REMARK 470 ARG A 645 CD NE CZ NH1 NH2 REMARK 470 GLU A 847 CG CD OE1 OE2 REMARK 470 GLU A 858 CG CD OE1 OE2 REMARK 470 ARG A 859 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 860 CG CD OE1 OE2 REMARK 470 HIS A 861 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 864 CG CD OE1 OE2 REMARK 470 LYS A 948 CG CD CE NZ REMARK 470 GLU A 973 CG CD OE1 OE2 REMARK 470 LYS A1215 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HD22 ASN A 1103 OE1 GLU A 1163 1.58 REMARK 500 OE2 GLU A 522 HH22 ARG A 753 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 185 30.18 74.51 REMARK 500 PRO A 231 63.95 -67.64 REMARK 500 ARG A 282 79.85 62.44 REMARK 500 GLU A 289 -131.22 -105.43 REMARK 500 ASN A 336 60.92 39.75 REMARK 500 ASN A 488 48.11 -87.93 REMARK 500 SER A 515 -20.45 -141.81 REMARK 500 SER A 654 -97.21 -129.35 REMARK 500 ARG A 748 -117.02 48.41 REMARK 500 SER A 815 -6.59 85.66 REMARK 500 TYR A 833 150.00 -170.03 REMARK 500 LEU A 862 110.00 -171.24 REMARK 500 ASP A 863 120.39 -29.35 REMARK 500 LYS A 890 135.55 -173.60 REMARK 500 GLN A 906 -10.58 73.82 REMARK 500 LEU A1035 77.01 -106.33 REMARK 500 PRO A1043 46.05 -87.43 REMARK 500 ASP A1078 89.82 -153.72 REMARK 500 ARG A1083 -113.10 68.76 REMARK 500 ASN A1134 115.76 -167.60 REMARK 500 ASN A1137 48.30 -153.57 REMARK 500 ASN A1151 75.08 -118.80 REMARK 500 LEU A1202 -3.03 65.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A1302 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR A 93 O REMARK 620 2 ASP A 96 O 78.2 REMARK 620 3 PHE A 99 O 74.3 79.8 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 336 OD1 REMARK 620 2 GLU A 365 OE2 87.4 REMARK 620 3 ASP A 367 OD1 83.4 89.9 REMARK 620 4 ASP A 367 OD2 76.4 134.6 46.8 REMARK 620 5 GLU A 414 OE2 165.3 105.2 103.7 99.0 REMARK 620 6 HOH A1553 O 82.9 157.9 108.5 61.7 82.7 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 1301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 1302 DBREF 6PBC A 21 765 UNP G3V845 G3V845_RAT 21 765 DBREF 6PBC A 791 1215 UNP P10686 PLCG1_RAT 791 1215 SEQADV 6PBC SER A 18 UNP G3V845 EXPRESSION TAG SEQADV 6PBC GLN A 19 UNP G3V845 EXPRESSION TAG SEQADV 6PBC ALA A 20 UNP G3V845 EXPRESSION TAG SEQADV 6PBC SER A 788 UNP G3V845 LINKER SEQADV 6PBC GLY A 789 UNP G3V845 LINKER SEQADV 6PBC SER A 790 UNP G3V845 LINKER SEQRES 1 A 1176 SER GLN ALA GLU VAL LEU HIS LEU CYS ARG SER LEU GLU SEQRES 2 A 1176 VAL GLY THR VAL MET THR LEU PHE TYR SER LYS LYS SER SEQRES 3 A 1176 GLN ARG PRO GLU ARG LYS THR PHE GLN VAL LYS LEU GLU SEQRES 4 A 1176 THR ARG GLN ILE THR TRP SER ARG GLY ALA ASP LYS ILE SEQRES 5 A 1176 GLU GLY SER ILE ASP ILE ARG GLU ILE LYS GLU ILE ARG SEQRES 6 A 1176 PRO GLY LYS THR SER ARG ASP PHE ASP ARG TYR GLN GLU SEQRES 7 A 1176 ASP PRO ALA PHE ARG PRO ASP GLN SER HIS CYS PHE VAL SEQRES 8 A 1176 ILE LEU TYR GLY MET GLU PHE ARG LEU LYS THR LEU SER SEQRES 9 A 1176 LEU GLN ALA THR SER GLU ASP GLU VAL ASN MET TRP ILE SEQRES 10 A 1176 LYS GLY LEU THR TRP LEU MET GLU ASP THR LEU GLN ALA SEQRES 11 A 1176 ALA THR PRO LEU GLN ILE GLU ARG TRP LEU ARG LYS GLN SEQRES 12 A 1176 PHE TYR SER VAL ASP ARG ASN ARG GLU ASP ARG ILE SER SEQRES 13 A 1176 ALA LYS ASP LEU LYS ASN MET LEU SER GLN VAL ASN TYR SEQRES 14 A 1176 ARG VAL PRO ASN MET ARG PHE LEU ARG GLU ARG LEU THR SEQRES 15 A 1176 ASP LEU GLU GLN ARG SER GLY ASP ILE THR TYR GLY GLN SEQRES 16 A 1176 PHE ALA GLN LEU TYR ARG SER LEU MET TYR SER ALA GLN SEQRES 17 A 1176 LYS THR MET ASP LEU PRO PHE LEU GLU THR ASN THR LEU SEQRES 18 A 1176 ARG THR GLY GLU ARG PRO GLU LEU CYS GLN VAL SER LEU SEQRES 19 A 1176 SER GLU PHE GLN GLN PHE LEU LEU GLU TYR GLN GLY GLU SEQRES 20 A 1176 LEU TRP ALA VAL ASP ARG LEU GLN VAL GLN GLU PHE MET SEQRES 21 A 1176 LEU SER PHE LEU ARG ASP PRO LEU ARG GLU ILE GLU GLU SEQRES 22 A 1176 PRO TYR PHE PHE LEU ASP GLU LEU VAL THR PHE LEU PHE SEQRES 23 A 1176 SER LYS GLU ASN SER VAL TRP ASN SER GLN LEU ASP ALA SEQRES 24 A 1176 VAL CYS PRO GLU THR MET ASN ASN PRO LEU SER HIS TYR SEQRES 25 A 1176 TRP ILE SER SER SER HIS ASN THR TYR LEU THR GLY ASP SEQRES 26 A 1176 GLN PHE SER SER GLU SER SER LEU GLU ALA TYR ALA ARG SEQRES 27 A 1176 CYS LEU ARG MET GLY CYS ARG CYS ILE GLU LEU ASP CYS SEQRES 28 A 1176 TRP ASP GLY PRO ASP GLY MET PRO VAL ILE TYR HIS GLY SEQRES 29 A 1176 HIS THR LEU THR THR LYS ILE LYS PHE SER ASP VAL LEU SEQRES 30 A 1176 HIS THR ILE LYS GLU HIS ALA PHE VAL ALA SER GLU TYR SEQRES 31 A 1176 PRO VAL ILE LEU SER ILE GLU ASP HIS CYS SER ILE ALA SEQRES 32 A 1176 GLN GLN ARG ASN MET ALA GLN HIS PHE ARG LYS VAL LEU SEQRES 33 A 1176 GLY ASP THR LEU LEU THR LYS PRO VAL ASP ILE ALA ALA SEQRES 34 A 1176 ASP GLY LEU PRO SER PRO ASN GLN LEU LYS ARG LYS ILE SEQRES 35 A 1176 LEU ILE LYS HIS LYS LYS LEU ALA GLU GLY SER ALA TYR SEQRES 36 A 1176 GLU GLU VAL PRO THR SER VAL MET TYR SER GLU ASN ASP SEQRES 37 A 1176 ILE SER ASN SER ILE LYS ASN GLY ILE LEU TYR LEU GLU SEQRES 38 A 1176 ASP PRO VAL ASN HIS GLU TRP TYR PRO HIS TYR PHE VAL SEQRES 39 A 1176 LEU THR SER SER LYS ILE TYR TYR SER GLU GLU THR SER SEQRES 40 A 1176 SER ASP GLN GLY ASN GLU ASP GLU GLU GLU PRO LYS GLU SEQRES 41 A 1176 ALA SER GLY SER THR GLU LEU HIS SER SER GLU LYS TRP SEQRES 42 A 1176 PHE HIS GLY LYS LEU GLY ALA GLY ARG ASP GLY ARG HIS SEQRES 43 A 1176 ILE ALA GLU ARG LEU LEU THR GLU TYR CYS ILE GLU THR SEQRES 44 A 1176 GLY ALA PRO ASP GLY SER PHE LEU VAL ARG GLU SER GLU SEQRES 45 A 1176 THR PHE VAL GLY ASP TYR THR LEU SER PHE TRP ARG ASN SEQRES 46 A 1176 GLY LYS VAL GLN HIS CYS ARG ILE HIS SER ARG GLN ASP SEQRES 47 A 1176 ALA GLY THR PRO LYS PHE PHE LEU THR ASP ASN LEU VAL SEQRES 48 A 1176 PHE ASP SER LEU TYR ASP LEU ILE THR HIS TYR GLN GLN SEQRES 49 A 1176 VAL PRO LEU ARG CYS ASN GLU PHE GLU MET ARG LEU SER SEQRES 50 A 1176 GLU PRO VAL PRO GLN THR ASN ALA HIS GLU SER LYS GLU SEQRES 51 A 1176 TRP TYR HIS ALA SER LEU THR ARG ALA GLN ALA GLU HIS SEQRES 52 A 1176 MET LEU MET ARG VAL PRO ARG ASP GLY ALA PHE LEU VAL SEQRES 53 A 1176 ARG LYS ARG ASN GLU PRO ASN SER TYR ALA ILE SER PHE SEQRES 54 A 1176 ARG ALA GLU GLY LYS ILE LYS HIS CYS ARG VAL GLN GLN SEQRES 55 A 1176 GLU GLY GLN THR VAL MET LEU GLY ASN SER GLU PHE ASP SEQRES 56 A 1176 SER LEU VAL ASP LEU ILE SER TYR TYR GLU LYS HIS PRO SEQRES 57 A 1176 LEU TYR ARG LYS MET LYS LEU ARG TYR PRO ILE ASN GLU SEQRES 58 A 1176 GLU ALA LEU GLU LYS ILE GLY SER GLY SER THR PHE LYS SEQRES 59 A 1176 CYS ALA VAL LYS ALA LEU PHE ASP TYR LYS ALA GLN ARG SEQRES 60 A 1176 GLU ASP GLU LEU THR PHE THR LYS SER ALA ILE ILE GLN SEQRES 61 A 1176 ASN VAL GLU LYS GLN ASP GLY GLY TRP TRP ARG GLY ASP SEQRES 62 A 1176 TYR GLY GLY LYS LYS GLN LEU TRP PHE PRO SER ASN TYR SEQRES 63 A 1176 VAL GLU GLU MET ILE ASN PRO ALA ILE LEU GLU PRO GLU SEQRES 64 A 1176 ARG GLU HIS LEU ASP GLU ASN SER PRO LEU GLY ASP LEU SEQRES 65 A 1176 LEU ARG GLY VAL LEU ASP VAL PRO ALA CYS GLN ILE ALA SEQRES 66 A 1176 ILE ARG PRO GLU GLY LYS ASN ASN ARG LEU PHE VAL PHE SEQRES 67 A 1176 SER ILE SER MET PRO SER VAL ALA GLN TRP SER LEU ASP SEQRES 68 A 1176 VAL ALA ALA ASP SER GLN GLU GLU LEU GLN ASP TRP VAL SEQRES 69 A 1176 LYS LYS ILE ARG GLU VAL ALA GLN THR ALA ASP ALA ARG SEQRES 70 A 1176 LEU THR GLU GLY LYS MET MET GLU ARG ARG LYS LYS ILE SEQRES 71 A 1176 ALA LEU GLU LEU SER GLU LEU VAL VAL TYR CYS ARG PRO SEQRES 72 A 1176 VAL PRO PHE ASP GLU GLU LYS ILE GLY THR GLU ARG ALA SEQRES 73 A 1176 CYS TYR ARG ASP MET SER SER PHE PRO GLU THR LYS ALA SEQRES 74 A 1176 GLU LYS TYR VAL ASN LYS ALA LYS GLY LYS LYS PHE LEU SEQRES 75 A 1176 GLN TYR ASN ARG LEU GLN LEU SER ARG ILE TYR PRO LYS SEQRES 76 A 1176 GLY GLN ARG LEU ASP SER SER ASN TYR ASP PRO LEU PRO SEQRES 77 A 1176 MET TRP ILE CYS GLY SER GLN LEU VAL ALA LEU ASN PHE SEQRES 78 A 1176 GLN THR PRO ASP LYS PRO MET GLN MET ASN GLN ALA LEU SEQRES 79 A 1176 PHE MET ALA GLY GLY HIS CYS GLY TYR VAL LEU GLN PRO SEQRES 80 A 1176 SER THR MET ARG ASP GLU ALA PHE ASP PRO PHE ASP LYS SEQRES 81 A 1176 SER SER LEU ARG GLY LEU GLU PRO CYS VAL ILE CYS ILE SEQRES 82 A 1176 GLU VAL LEU GLY ALA ARG HIS LEU PRO LYS ASN GLY ARG SEQRES 83 A 1176 GLY ILE VAL CYS PRO PHE VAL GLU ILE GLU VAL ALA GLY SEQRES 84 A 1176 ALA GLU TYR ASP SER THR LYS GLN LYS THR GLU PHE VAL SEQRES 85 A 1176 VAL ASP ASN GLY LEU ASN PRO VAL TRP PRO ALA LYS PRO SEQRES 86 A 1176 PHE HIS PHE GLN ILE SER ASN PRO GLU PHE ALA PHE LEU SEQRES 87 A 1176 ARG PHE VAL VAL TYR GLU GLU ASP MET PHE SER ASP GLN SEQRES 88 A 1176 ASN PHE LEU ALA GLN ALA THR PHE PRO VAL LYS GLY LEU SEQRES 89 A 1176 LYS THR GLY TYR ARG ALA VAL PRO LEU LYS ASN ASN TYR SEQRES 90 A 1176 SER GLU ASP LEU GLU LEU ALA SER LEU LEU ILE LYS ILE SEQRES 91 A 1176 ASP ILE PHE PRO ALA LYS HET CA A1301 1 HET NA A1302 1 HETNAM CA CALCIUM ION HETNAM NA SODIUM ION FORMUL 2 CA CA 2+ FORMUL 3 NA NA 1+ FORMUL 4 HOH *246(H2 O) HELIX 1 AA1 GLU A 21 LEU A 29 1 9 HELIX 2 AA2 SER A 87 ARG A 92 1 6 HELIX 3 AA3 SER A 126 GLN A 146 1 21 HELIX 4 AA4 ALA A 148 VAL A 164 1 17 HELIX 5 AA5 SER A 173 VAL A 184 1 12 HELIX 6 AA6 TYR A 210 GLN A 225 1 16 HELIX 7 AA7 LEU A 251 TYR A 261 1 11 HELIX 8 AA8 GLU A 264 VAL A 268 5 5 HELIX 9 AA9 ASP A 269 ARG A 282 1 14 HELIX 10 AB1 PHE A 294 PHE A 303 1 10 HELIX 11 AB2 SER A 304 SER A 308 5 5 HELIX 12 AB3 ASN A 311 ALA A 316 5 6 HELIX 13 AB4 CYS A 318 MET A 322 5 5 HELIX 14 AB5 PRO A 325 SER A 327 5 3 HELIX 15 AB6 SER A 349 MET A 359 1 11 HELIX 16 AB7 PHE A 390 ALA A 401 1 12 HELIX 17 AB8 SER A 418 GLY A 434 1 17 HELIX 18 AB9 ASP A 435 LEU A 437 5 3 HELIX 19 AC1 PRO A 452 LYS A 456 5 5 HELIX 20 AC2 GLY A 558 GLY A 577 1 20 HELIX 21 AC3 SER A 631 GLN A 640 1 10 HELIX 22 AC4 ASN A 661 LYS A 666 5 6 HELIX 23 AC5 THR A 674 MET A 683 1 10 HELIX 24 AC6 SER A 733 HIS A 744 1 12 HELIX 25 AC7 ASN A 757 ILE A 764 1 8 HELIX 26 AC8 ASN A 851 LEU A 855 5 5 HELIX 27 AC9 LEU A 868 ASP A 870 5 3 HELIX 28 AD1 PRO A 879 CYS A 881 5 3 HELIX 29 AD2 SER A 915 GLN A 931 1 17 HELIX 30 AD3 ALA A 950 GLU A 955 1 6 HELIX 31 AD4 ASP A 966 ILE A 970 5 5 HELIX 32 AD5 GLU A 985 GLU A 989 1 5 HELIX 33 AD6 LYS A 996 GLN A 1007 1 12 HELIX 34 AD7 PRO A 1025 ILE A 1030 1 6 HELIX 35 AD8 ASP A 1044 PHE A 1054 1 11 HELIX 36 AD9 ASP A 1078 ARG A 1083 5 6 HELIX 37 AE1 GLU A 1120 SER A 1123 5 4 HELIX 38 AE2 LYS A 1181 LEU A 1183 5 3 SHEET 1 AA1 7 GLY A 71 ASP A 74 0 SHEET 2 AA1 7 GLN A 59 TRP A 62 -1 N ILE A 60 O ILE A 73 SHEET 3 AA1 7 GLU A 47 LYS A 54 -1 N LYS A 54 O GLN A 59 SHEET 4 AA1 7 THR A 33 PHE A 38 -1 N LEU A 37 O GLU A 47 SHEET 5 AA1 7 LYS A 118 GLN A 123 -1 O GLN A 123 N THR A 36 SHEET 6 AA1 7 CYS A 106 TYR A 111 -1 N TYR A 111 O LYS A 118 SHEET 7 AA1 7 ILE A 78 PRO A 83 -1 N ARG A 82 O VAL A 108 SHEET 1 AA2 2 ARG A 171 ILE A 172 0 SHEET 2 AA2 2 ILE A 208 THR A 209 -1 O ILE A 208 N ILE A 172 SHEET 1 AA3 2 VAL A 249 SER A 250 0 SHEET 2 AA3 2 TYR A 292 PHE A 293 -1 O PHE A 293 N VAL A 249 SHEET 1 AA4 2 TYR A 329 ILE A 331 0 SHEET 2 AA4 2 TYR A1062 LEU A1064 -1 O VAL A1063 N TRP A 330 SHEET 1 AA5 5 SER A 333 SER A 334 0 SHEET 2 AA5 5 LEU A1035 LEU A1038 1 O LEU A1038 N SER A 333 SHEET 3 AA5 5 SER A1009 TYR A1012 1 N ILE A1011 O LEU A1035 SHEET 4 AA5 5 ASP A 979 PRO A 984 1 N PHE A 983 O ARG A1010 SHEET 5 AA5 5 ARG A 961 PRO A 962 1 N ARG A 961 O MET A 980 SHEET 1 AA6 5 ILE A 388 LYS A 389 0 SHEET 2 AA6 5 VAL A 377 ILE A 378 -1 N ILE A 378 O ILE A 388 SHEET 3 AA6 5 CYS A 363 TRP A 369 -1 N TRP A 369 O VAL A 377 SHEET 4 AA6 5 VAL A 409 ASP A 415 1 O SER A 412 N ILE A 364 SHEET 5 AA6 5 ILE A 459 LYS A 462 1 O LYS A 462 N LEU A 411 SHEET 1 AA7 7 LEU A 872 ASP A 877 0 SHEET 2 AA7 7 LYS A 516 GLU A 522 -1 N ILE A 517 O LEU A 876 SHEET 3 AA7 7 TRP A 505 LEU A 512 -1 N VAL A 511 O TYR A 518 SHEET 4 AA7 7 LYS A 491 GLU A 498 -1 N GLY A 493 O PHE A 510 SHEET 5 AA7 7 SER A 908 ALA A 913 -1 O ALA A 912 N TYR A 496 SHEET 6 AA7 7 PHE A 895 SER A 900 -1 N PHE A 897 O VAL A 911 SHEET 7 AA7 7 GLN A 882 ARG A 886 -1 N ALA A 884 O SER A 898 SHEET 1 AA8 4 PHE A 583 GLU A 587 0 SHEET 2 AA8 4 TYR A 595 ARG A 601 -1 O THR A 596 N ARG A 586 SHEET 3 AA8 4 LYS A 604 ARG A 613 -1 O ILE A 610 N TYR A 595 SHEET 4 AA8 4 LYS A 620 LEU A 623 -1 O LYS A 620 N ARG A 613 SHEET 1 AA9 6 TYR A 669 HIS A 670 0 SHEET 2 AA9 6 ALA A 690 LYS A 695 1 O VAL A 693 N HIS A 670 SHEET 3 AA9 6 SER A 701 ALA A 708 -1 O ARG A 707 N ALA A 690 SHEET 4 AA9 6 LYS A 711 GLU A 720 -1 O CYS A 715 N ILE A 704 SHEET 5 AA9 6 THR A 723 LEU A 726 -1 O THR A 723 N GLU A 720 SHEET 6 AA9 6 SER A 729 PHE A 731 -1 O SER A 729 N LEU A 726 SHEET 1 AB1 3 TYR A 669 HIS A 670 0 SHEET 2 AB1 3 ALA A 690 LYS A 695 1 O VAL A 693 N HIS A 670 SHEET 3 AB1 3 TYR A 754 PRO A 755 1 O TYR A 754 N PHE A 691 SHEET 1 AB2 5 LYS A 836 PRO A 842 0 SHEET 2 AB2 5 TRP A 828 TYR A 833 -1 N GLY A 831 O LEU A 839 SHEET 3 AB2 5 ILE A 817 GLU A 822 -1 N GLU A 822 O ARG A 830 SHEET 4 AB2 5 CYS A 794 ALA A 798 -1 N VAL A 796 O ILE A 818 SHEET 5 AB2 5 VAL A 846 GLU A 848 -1 O GLU A 847 N LYS A 797 SHEET 1 AB3 4 PHE A1145 ILE A1149 0 SHEET 2 AB3 4 CYS A1088 ARG A1098 -1 N CYS A1088 O ILE A1149 SHEET 3 AB3 4 ASP A1199 PHE A1212 -1 O PHE A1212 N VAL A1089 SHEET 4 AB3 4 GLY A1186 LYS A1193 -1 N GLY A1186 O ILE A1209 SHEET 1 AB4 4 THR A1124 LYS A1127 0 SHEET 2 AB4 4 PRO A1110 GLY A1118 -1 N ILE A1114 O GLN A1126 SHEET 3 AB4 4 ALA A1155 GLU A1164 -1 O ARG A1158 N GLU A1115 SHEET 4 AB4 4 GLN A1170 PRO A1179 -1 O ALA A1176 N PHE A1159 LINK O TYR A 93 NA NA A1302 1555 1555 2.68 LINK O ASP A 96 NA NA A1302 1555 1555 2.38 LINK O PHE A 99 NA NA A1302 1555 1555 2.69 LINK OD1 ASN A 336 CA CA A1301 1555 1555 2.53 LINK OE2 GLU A 365 CA CA A1301 1555 1555 2.44 LINK OD1 ASP A 367 CA CA A1301 1555 1555 2.66 LINK OD2 ASP A 367 CA CA A1301 1555 1555 2.85 LINK OE2 GLU A 414 CA CA A1301 1555 1555 2.81 LINK CA CA A1301 O HOH A1553 1555 1555 2.73 CISPEP 1 PHE A 1212 PRO A 1213 0 -0.83 SITE 1 AC1 5 ASN A 336 GLU A 365 ASP A 367 GLU A 414 SITE 2 AC1 5 HOH A1553 SITE 1 AC2 5 TYR A 93 GLN A 94 ASP A 96 PHE A 99 SITE 2 AC2 5 ARG A 100 CRYST1 70.766 82.441 228.318 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014131 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012130 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004380 0.00000