HEADER PROTEIN TRANSPORT 25-JUN-19 6PI4 TITLE CRYSTAL STRUCTURE OF ATP SYNTHASE EPSION CHAIN ATP SYNTHASE EPSILON TITLE 2 CHAIN (ATP SYNTHASE F1 SECTOR EPSILON SUBUNIT) (F-ATPASE EPSILON TITLE 3 SUBUNIT) FROM MYCOBACTERIUM SMEGMATIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: ATP SYNTHASE EPSILON CHAIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ATP SYNTHASE F1 SECTOR EPSILON SUBUNIT,F-ATPASE EPSILON COMPND 5 SUBUNIT; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM SMEGMATIS (STRAIN ATCC 700084 / SOURCE 3 MC(2)155); SOURCE 4 ORGANISM_TAXID: 246196; SOURCE 5 STRAIN: ATCC 700084 / MC(2)155; SOURCE 6 ATCC: 7000084; SOURCE 7 GENE: ATPC, MSMEG_4935, MSMEI_4808; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 10 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 11 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: MYSMA.18337.A.B1 KEYWDS SSGCID, STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR KEYWDS 2 INFECTIOUS DISEASE, PROTEIN TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 3 03-APR-24 6PI4 1 REMARK REVDAT 2 13-MAR-24 6PI4 1 REMARK REVDAT 1 24-JUL-19 6PI4 0 JRNL AUTH J.ABENDROTH,D.M.DRANOW,D.D.LORIMER,P.S.HORANYI,T.E.EDWARDS JRNL TITL CRYSTAL STRUCTURE OF ATP SYNTHASE EPSION CHAIN ATP SYNTHASE JRNL TITL 2 EPSILON CHAIN (ATP SYNTHASE F1 SECTOR EPSILON SUBUNIT) JRNL TITL 3 (F-ATPASE EPSILON SUBUNIT) FROM MYCOBACTERIUM SMEGMATIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (DEV_3500) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.82 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 8631 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.226 REMARK 3 R VALUE (WORKING SET) : 0.220 REMARK 3 FREE R VALUE : 0.283 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.990 REMARK 3 FREE R VALUE TEST SET COUNT : 862 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.8261 - 3.8153 0.98 1361 143 0.1785 0.2489 REMARK 3 2 3.8153 - 3.0285 0.99 1301 150 0.2164 0.2658 REMARK 3 3 3.0285 - 2.6458 0.99 1300 134 0.2511 0.2951 REMARK 3 4 2.6458 - 2.4039 0.99 1300 119 0.2836 0.3380 REMARK 3 5 2.4039 - 2.2316 0.99 1233 156 0.2952 0.3840 REMARK 3 6 2.2316 - 2.1000 0.99 1274 160 0.3366 0.3954 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.260 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 37.970 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 48.14 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 70.01 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 891 REMARK 3 ANGLE : 0.806 1217 REMARK 3 CHIRALITY : 0.055 147 REMARK 3 PLANARITY : 0.005 163 REMARK 3 DIHEDRAL : 17.593 530 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3 THROUGH 12 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.9105 14.6835 5.3145 REMARK 3 T TENSOR REMARK 3 T11: 0.3855 T22: 0.4748 REMARK 3 T33: 0.4377 T12: -0.0913 REMARK 3 T13: -0.0016 T23: -0.0244 REMARK 3 L TENSOR REMARK 3 L11: 7.3042 L22: 2.2680 REMARK 3 L33: 2.3129 L12: -0.7057 REMARK 3 L13: 1.9116 L23: -2.1483 REMARK 3 S TENSOR REMARK 3 S11: 0.1286 S12: 0.4919 S13: -0.7735 REMARK 3 S21: -0.3891 S22: 0.1457 S23: 0.3016 REMARK 3 S31: 1.1563 S32: -0.5832 S33: -0.3925 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 13 THROUGH 35 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.0820 18.0890 35.0354 REMARK 3 T TENSOR REMARK 3 T11: 0.3235 T22: 0.5435 REMARK 3 T33: 0.3192 T12: 0.0112 REMARK 3 T13: -0.0046 T23: -0.0075 REMARK 3 L TENSOR REMARK 3 L11: 5.7619 L22: 3.8420 REMARK 3 L33: 7.8534 L12: 0.8235 REMARK 3 L13: -0.3311 L23: 2.2969 REMARK 3 S TENSOR REMARK 3 S11: -0.0441 S12: -0.8948 S13: 0.1351 REMARK 3 S21: 0.1203 S22: -0.0414 S23: -0.0549 REMARK 3 S31: -0.0586 S32: 0.4178 S33: 0.0296 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 36 THROUGH 54 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.4036 16.8774 33.9687 REMARK 3 T TENSOR REMARK 3 T11: 0.3171 T22: 0.5619 REMARK 3 T33: 0.4180 T12: 0.0184 REMARK 3 T13: 0.0512 T23: -0.0992 REMARK 3 L TENSOR REMARK 3 L11: 6.9101 L22: 4.1383 REMARK 3 L33: 8.1316 L12: -0.4908 REMARK 3 L13: 0.5251 L23: 1.2378 REMARK 3 S TENSOR REMARK 3 S11: -0.1781 S12: -0.5791 S13: -0.1974 REMARK 3 S21: 0.1770 S22: 0.0067 S23: -0.0189 REMARK 3 S31: 0.2501 S32: -0.3669 S33: 0.1365 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 55 THROUGH 72 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.8053 21.9263 34.4107 REMARK 3 T TENSOR REMARK 3 T11: 0.3151 T22: 0.4234 REMARK 3 T33: 0.4343 T12: 0.0354 REMARK 3 T13: 0.0064 T23: -0.0790 REMARK 3 L TENSOR REMARK 3 L11: 7.9069 L22: 4.2682 REMARK 3 L33: 8.1200 L12: -0.1481 REMARK 3 L13: 2.0418 L23: 1.9132 REMARK 3 S TENSOR REMARK 3 S11: -0.1605 S12: -1.0138 S13: -0.0428 REMARK 3 S21: 0.1320 S22: 0.2511 S23: -0.1896 REMARK 3 S31: -0.5435 S32: -0.2179 S33: -0.1698 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 73 THROUGH 91 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.9962 21.3576 28.2856 REMARK 3 T TENSOR REMARK 3 T11: 0.5360 T22: 0.4315 REMARK 3 T33: 0.4341 T12: -0.0612 REMARK 3 T13: -0.0653 T23: -0.0180 REMARK 3 L TENSOR REMARK 3 L11: 7.8912 L22: 2.8442 REMARK 3 L33: 3.6733 L12: -0.7195 REMARK 3 L13: 0.6778 L23: -1.0613 REMARK 3 S TENSOR REMARK 3 S11: 0.0415 S12: 0.2835 S13: 0.5825 REMARK 3 S21: 0.6422 S22: -0.2810 S23: -0.3524 REMARK 3 S31: -0.6267 S32: -0.0408 S33: 0.2884 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 92 THROUGH 103 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.5174 36.9708 21.6753 REMARK 3 T TENSOR REMARK 3 T11: 1.6436 T22: 0.8979 REMARK 3 T33: 1.2477 T12: 0.3494 REMARK 3 T13: -0.0977 T23: 0.1528 REMARK 3 L TENSOR REMARK 3 L11: 8.2709 L22: 3.8983 REMARK 3 L33: 3.9734 L12: -4.6243 REMARK 3 L13: 4.3577 L23: -3.9228 REMARK 3 S TENSOR REMARK 3 S11: 1.5100 S12: 1.8274 S13: 0.6027 REMARK 3 S21: 0.1523 S22: -0.3079 S23: 0.6543 REMARK 3 S31: 0.7714 S32: -0.4378 S33: -1.3325 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 104 THROUGH 121 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.0678 31.2546 27.4578 REMARK 3 T TENSOR REMARK 3 T11: 1.1773 T22: 0.7154 REMARK 3 T33: 0.7032 T12: 0.3757 REMARK 3 T13: -0.0443 T23: -0.2010 REMARK 3 L TENSOR REMARK 3 L11: 9.1159 L22: 5.8941 REMARK 3 L33: 4.2870 L12: 3.2670 REMARK 3 L13: 1.7503 L23: 1.7252 REMARK 3 S TENSOR REMARK 3 S11: -0.3607 S12: -0.8537 S13: 1.2906 REMARK 3 S21: 0.3519 S22: -0.5577 S23: 0.9319 REMARK 3 S31: -2.6017 S32: -1.8180 S33: 0.7956 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6PI4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-JUN-19. REMARK 100 THE DEPOSITION ID IS D_1000242581. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-NOV-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : C(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8662 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 43.817 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 6.101 REMARK 200 R MERGE (I) : 0.05400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.2800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.15 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.23 REMARK 200 R MERGE FOR SHELL (I) : 0.53800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.480 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MR-ROSETTA REMARK 200 STARTING MODEL: MR-ROSETTA USING TOP 8 HHM HITS: 6FOC_H, 1FS0_E, REMARK 200 6FKF_E, 5IK2_P, 5DN6_I, 5ZWL_E, 2E5Y_H, 6F5D_H REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: RIGAKUREAGENTS JCSG+ SCREEN, B10: 50% REMARK 280 PEG 200, 200MM MGCL2, 100MM SODIUM CACODYLATE PH 6.5: REMARK 280 MYSMA.18337.A.B1.PS38196 AT 17.3MG/ML + 6MM MGCL2 + 6MM ATP. REMARK 280 CRYO: DIRECT: TRAY 290121 B10: PUCK NWW5-5, VAPOR DIFFUSION, REMARK 280 SITTING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 35.51000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 35.51000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 26.93500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 37.66000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 26.93500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 37.66000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 35.51000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 26.93500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 37.66000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 35.51000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 26.93500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 37.66000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3890 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 53.87000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 35.51000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 324 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -7 REMARK 465 ALA A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 37 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 39 CG1 CG2 CD1 REMARK 470 GLU A 74 CG CD OE1 OE2 REMARK 470 GLU A 75 CG CD OE1 OE2 REMARK 470 LYS A 96 CG CD CE NZ REMARK 470 GLU A 97 CG CD OE1 OE2 REMARK 470 ASP A 102 CG OD1 OD2 REMARK 470 ASP A 103 CG OD1 OD2 REMARK 470 GLU A 104 CG CD OE1 OE2 REMARK 470 ARG A 105 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 120 CG1 CG2 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 48 44.32 -102.83 REMARK 500 SER A 101 77.12 -56.62 REMARK 500 ASP A 102 -75.36 -64.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CAC A 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: SSGCID-MYSMA.18837.A RELATED DB: TARGETTRACK DBREF 6PI4 A 1 121 UNP A0R1Z9 ATPE_MYCS2 1 121 SEQADV 6PI4 MET A -7 UNP A0R1Z9 INITIATING METHIONINE SEQADV 6PI4 ALA A -6 UNP A0R1Z9 EXPRESSION TAG SEQADV 6PI4 HIS A -5 UNP A0R1Z9 EXPRESSION TAG SEQADV 6PI4 HIS A -4 UNP A0R1Z9 EXPRESSION TAG SEQADV 6PI4 HIS A -3 UNP A0R1Z9 EXPRESSION TAG SEQADV 6PI4 HIS A -2 UNP A0R1Z9 EXPRESSION TAG SEQADV 6PI4 HIS A -1 UNP A0R1Z9 EXPRESSION TAG SEQADV 6PI4 HIS A 0 UNP A0R1Z9 EXPRESSION TAG SEQRES 1 A 129 MET ALA HIS HIS HIS HIS HIS HIS MET ALA ASP LEU ASN SEQRES 2 A 129 VAL GLU ILE VAL ALA VAL GLU ARG GLU LEU TRP SER GLY SEQRES 3 A 129 PRO ALA THR PHE VAL PHE THR ARG THR THR ALA GLY GLU SEQRES 4 A 129 ILE GLY ILE LEU PRO ARG HIS ILE PRO LEU VAL ALA GLN SEQRES 5 A 129 LEU VAL ASP ASP ALA MET VAL ARG VAL GLU ARG GLU GLY SEQRES 6 A 129 GLU ASP ASP LEU ARG ILE ALA VAL ASP GLY GLY PHE LEU SEQRES 7 A 129 SER VAL THR GLU GLU THR VAL ARG ILE LEU VAL GLU ASN SEQRES 8 A 129 ALA GLN PHE GLU SER GLU ILE ASP ALA ASP ALA ALA LYS SEQRES 9 A 129 GLU ASP ALA ALA SER ASP ASP GLU ARG THR ALA ALA TRP SEQRES 10 A 129 GLY ARG ALA ARG LEU ARG ALA LEU GLY GLN ILE ASP HET CAC A 201 5 HETNAM CAC CACODYLATE ION HETSYN CAC DIMETHYLARSINATE FORMUL 2 CAC C2 H6 AS O2 1- FORMUL 3 HOH *26(H2 O) HELIX 1 AA1 ASP A 91 ALA A 100 1 10 HELIX 2 AA2 ASP A 103 LEU A 117 1 15 SHEET 1 AA1 5 GLY A 30 ILE A 34 0 SHEET 2 AA1 5 PHE A 22 THR A 27 -1 N THR A 27 O GLY A 30 SHEET 3 AA1 5 MET A 50 GLU A 54 -1 O ARG A 52 N PHE A 24 SHEET 4 AA1 5 LEU A 61 ASP A 66 -1 O LEU A 61 N VAL A 53 SHEET 5 AA1 5 ASN A 83 PHE A 86 -1 O ASN A 83 N ASP A 66 SHEET 1 AA2 3 LEU A 41 GLN A 44 0 SHEET 2 AA2 3 PHE A 69 VAL A 72 -1 O LEU A 70 N ALA A 43 SHEET 3 AA2 3 VAL A 77 LEU A 80 -1 O LEU A 80 N PHE A 69 SITE 1 AC1 4 GLU A 7 GLU A 14 GLU A 31 ASP A 121 CRYST1 53.870 75.320 71.020 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018563 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013277 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014081 0.00000