data_6PQ4 # _entry.id 6PQ4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6PQ4 pdb_00006pq4 10.2210/pdb6pq4/pdb WWPDB D_1000242807 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6PQ4 _pdbx_database_status.recvd_initial_deposition_date 2019-07-08 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Bu, G.' 1 0000-0002-2797-5161 'Zhu, L.' 2 0000-0002-9474-1576 'Jing, L.' 3 0000-0003-0194-4022 'Shi, D.' 4 ? 'Gonen, T.' 5 ? 'Liu, W.' 6 0000-0002-7568-5521 'Nannenga, B.L.' 7 0000-0001-6859-3429 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Structure _citation.journal_id_ASTM STRUE6 _citation.journal_id_CSD 2005 _citation.journal_id_ISSN 0969-2126 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 28 _citation.language ? _citation.page_first 1149 _citation.page_last 1159.e4 _citation.title 'Structure Determination from Lipidic Cubic Phase Embedded Microcrystals by MicroED.' _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.str.2020.07.006 _citation.pdbx_database_id_PubMed 32735770 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zhu, L.' 1 ? primary 'Bu, G.' 2 ? primary 'Jing, L.' 3 ? primary 'Shi, D.' 4 ? primary 'Lee, M.Y.' 5 ? primary 'Gonen, T.' 6 ? primary 'Liu, W.' 7 ? primary 'Nannenga, B.L.' 8 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6PQ4 _cell.details ? _cell.formula_units_Z ? _cell.length_a 67.561 _cell.length_a_esd ? _cell.length_b 67.561 _cell.length_b_esd ? _cell.length_c 106.802 _cell.length_c_esd ? _cell.volume 487496.524 _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6PQ4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall 'P 4nw 2abw' _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'Proteinase K' 28930.783 1 3.4.21.64 ? 'UNP residues 106-384' ? 2 non-polymer syn 'CALCIUM ION' 40.078 2 ? ? ? ? 3 non-polymer syn 'NITRATE ION' 62.005 1 ? ? ? ? 4 water nat water 18.015 95 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Endopeptidase K, Tritirachium alkaline proteinase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;AAQTNAPWGLARISSTSPGTSTYYYDESAGQGSCVYVIDTGIEASHPEFEGRAQMVKTYYYSSRDGNGHGTHCAGTVGSR TYGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKNNRNCPKGVVASLSLGGGYSSSVNSAAARLQSSGVMVAVAAG NNNADARNYSPASEPSVCTVGASDRYDRRSSFSNYGSVLDIFGPGTSILSTWIGGSTRSISGTSMATPHVAGLAAYLMTL GKTTAASACRYIADTANKGDLSNIPFGTVNLLAYNNYQA ; _entity_poly.pdbx_seq_one_letter_code_can ;AAQTNAPWGLARISSTSPGTSTYYYDESAGQGSCVYVIDTGIEASHPEFEGRAQMVKTYYYSSRDGNGHGTHCAGTVGSR TYGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKNNRNCPKGVVASLSLGGGYSSSVNSAAARLQSSGVMVAVAAG NNNADARNYSPASEPSVCTVGASDRYDRRSSFSNYGSVLDIFGPGTSILSTWIGGSTRSISGTSMATPHVAGLAAYLMTL GKTTAASACRYIADTANKGDLSNIPFGTVNLLAYNNYQA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 ALA n 1 3 GLN n 1 4 THR n 1 5 ASN n 1 6 ALA n 1 7 PRO n 1 8 TRP n 1 9 GLY n 1 10 LEU n 1 11 ALA n 1 12 ARG n 1 13 ILE n 1 14 SER n 1 15 SER n 1 16 THR n 1 17 SER n 1 18 PRO n 1 19 GLY n 1 20 THR n 1 21 SER n 1 22 THR n 1 23 TYR n 1 24 TYR n 1 25 TYR n 1 26 ASP n 1 27 GLU n 1 28 SER n 1 29 ALA n 1 30 GLY n 1 31 GLN n 1 32 GLY n 1 33 SER n 1 34 CYS n 1 35 VAL n 1 36 TYR n 1 37 VAL n 1 38 ILE n 1 39 ASP n 1 40 THR n 1 41 GLY n 1 42 ILE n 1 43 GLU n 1 44 ALA n 1 45 SER n 1 46 HIS n 1 47 PRO n 1 48 GLU n 1 49 PHE n 1 50 GLU n 1 51 GLY n 1 52 ARG n 1 53 ALA n 1 54 GLN n 1 55 MET n 1 56 VAL n 1 57 LYS n 1 58 THR n 1 59 TYR n 1 60 TYR n 1 61 TYR n 1 62 SER n 1 63 SER n 1 64 ARG n 1 65 ASP n 1 66 GLY n 1 67 ASN n 1 68 GLY n 1 69 HIS n 1 70 GLY n 1 71 THR n 1 72 HIS n 1 73 CYS n 1 74 ALA n 1 75 GLY n 1 76 THR n 1 77 VAL n 1 78 GLY n 1 79 SER n 1 80 ARG n 1 81 THR n 1 82 TYR n 1 83 GLY n 1 84 VAL n 1 85 ALA n 1 86 LYS n 1 87 LYS n 1 88 THR n 1 89 GLN n 1 90 LEU n 1 91 PHE n 1 92 GLY n 1 93 VAL n 1 94 LYS n 1 95 VAL n 1 96 LEU n 1 97 ASP n 1 98 ASP n 1 99 ASN n 1 100 GLY n 1 101 SER n 1 102 GLY n 1 103 GLN n 1 104 TYR n 1 105 SER n 1 106 THR n 1 107 ILE n 1 108 ILE n 1 109 ALA n 1 110 GLY n 1 111 MET n 1 112 ASP n 1 113 PHE n 1 114 VAL n 1 115 ALA n 1 116 SER n 1 117 ASP n 1 118 LYS n 1 119 ASN n 1 120 ASN n 1 121 ARG n 1 122 ASN n 1 123 CYS n 1 124 PRO n 1 125 LYS n 1 126 GLY n 1 127 VAL n 1 128 VAL n 1 129 ALA n 1 130 SER n 1 131 LEU n 1 132 SER n 1 133 LEU n 1 134 GLY n 1 135 GLY n 1 136 GLY n 1 137 TYR n 1 138 SER n 1 139 SER n 1 140 SER n 1 141 VAL n 1 142 ASN n 1 143 SER n 1 144 ALA n 1 145 ALA n 1 146 ALA n 1 147 ARG n 1 148 LEU n 1 149 GLN n 1 150 SER n 1 151 SER n 1 152 GLY n 1 153 VAL n 1 154 MET n 1 155 VAL n 1 156 ALA n 1 157 VAL n 1 158 ALA n 1 159 ALA n 1 160 GLY n 1 161 ASN n 1 162 ASN n 1 163 ASN n 1 164 ALA n 1 165 ASP n 1 166 ALA n 1 167 ARG n 1 168 ASN n 1 169 TYR n 1 170 SER n 1 171 PRO n 1 172 ALA n 1 173 SER n 1 174 GLU n 1 175 PRO n 1 176 SER n 1 177 VAL n 1 178 CYS n 1 179 THR n 1 180 VAL n 1 181 GLY n 1 182 ALA n 1 183 SER n 1 184 ASP n 1 185 ARG n 1 186 TYR n 1 187 ASP n 1 188 ARG n 1 189 ARG n 1 190 SER n 1 191 SER n 1 192 PHE n 1 193 SER n 1 194 ASN n 1 195 TYR n 1 196 GLY n 1 197 SER n 1 198 VAL n 1 199 LEU n 1 200 ASP n 1 201 ILE n 1 202 PHE n 1 203 GLY n 1 204 PRO n 1 205 GLY n 1 206 THR n 1 207 SER n 1 208 ILE n 1 209 LEU n 1 210 SER n 1 211 THR n 1 212 TRP n 1 213 ILE n 1 214 GLY n 1 215 GLY n 1 216 SER n 1 217 THR n 1 218 ARG n 1 219 SER n 1 220 ILE n 1 221 SER n 1 222 GLY n 1 223 THR n 1 224 SER n 1 225 MET n 1 226 ALA n 1 227 THR n 1 228 PRO n 1 229 HIS n 1 230 VAL n 1 231 ALA n 1 232 GLY n 1 233 LEU n 1 234 ALA n 1 235 ALA n 1 236 TYR n 1 237 LEU n 1 238 MET n 1 239 THR n 1 240 LEU n 1 241 GLY n 1 242 LYS n 1 243 THR n 1 244 THR n 1 245 ALA n 1 246 ALA n 1 247 SER n 1 248 ALA n 1 249 CYS n 1 250 ARG n 1 251 TYR n 1 252 ILE n 1 253 ALA n 1 254 ASP n 1 255 THR n 1 256 ALA n 1 257 ASN n 1 258 LYS n 1 259 GLY n 1 260 ASP n 1 261 LEU n 1 262 SER n 1 263 ASN n 1 264 ILE n 1 265 PRO n 1 266 PHE n 1 267 GLY n 1 268 THR n 1 269 VAL n 1 270 ASN n 1 271 LEU n 1 272 LEU n 1 273 ALA n 1 274 TYR n 1 275 ASN n 1 276 ASN n 1 277 TYR n 1 278 GLN n 1 279 ALA n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num 1 _entity_src_nat.pdbx_end_seq_num 279 _entity_src_nat.common_name 'Engyodontium album, Tritirachium album' _entity_src_nat.pdbx_organism_scientific 'Parengyodontium album' _entity_src_nat.pdbx_ncbi_taxonomy_id 37998 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PRTK_PARAQ _struct_ref.pdbx_db_accession P06873 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;AAQTNAPWGLARISSTSPGTSTYYYDESAGQGSCVYVIDTGIEASHPEFEGRAQMVKTYYYSSRDGNGHGTHCAGTVGSR TYGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKNNRNCPKGVVASLSLGGGYSSSVNSAAARLQSSGVMVAVAAG NNNADARNYSPASEPSVCTVGASDRYDRRSSFSNYGSVLDIFGPGTSILSTWIGGSTRSISGTSMATPHVAGLAAYLMTL GKTTAASACRYIADTANKGDLSNIPFGTVNLLAYNNYQA ; _struct_ref.pdbx_align_begin 106 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6PQ4 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 279 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P06873 _struct_ref_seq.db_align_beg 106 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 384 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 106 _struct_ref_seq.pdbx_auth_seq_align_end 384 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NO3 non-polymer . 'NITRATE ION' ? 'N O3 -1' 62.005 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6PQ4 _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON CRYSTALLOGRAPHY' _exptl.method_details ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6PQ4 _refine.pdbx_refine_id 'ELECTRON CRYSTALLOGRAPHY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.00 _refine.ls_d_res_low 16.58 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 16351 _refine.ls_number_reflns_R_free 1632 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 94.6 _refine.ls_percent_reflns_R_free 10.00 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free 0.2824 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2442 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDB entry 2ID8' _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_ls_shell.pdbx_refine_id 'ELECTRON CRYSTALLOGRAPHY' _refine_ls_shell.d_res_high 2.0001 _refine_ls_shell.d_res_low 2.0589 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 133 _refine_ls_shell.number_reflns_R_work 1200 _refine_ls_shell.percent_reflns_obs 94.6 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.3666 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.3356 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6PQ4 _struct.title 'LCP-embedded Proteinase K treated with lipase' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6PQ4 _struct_keywords.text 'Proteinase K, LCP, lipase, MicroED, HYDROLASE' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PRO A 7 ? SER A 14 ? PRO A 112 SER A 119 1 ? 8 HELX_P HELX_P2 AA2 HIS A 46 ? GLU A 50 ? HIS A 151 GLU A 155 5 ? 5 HELX_P HELX_P3 AA3 GLY A 68 ? SER A 79 ? GLY A 173 SER A 184 1 ? 12 HELX_P HELX_P4 AA4 GLN A 103 ? LYS A 118 ? GLN A 208 LYS A 223 1 ? 16 HELX_P HELX_P5 AA5 SER A 138 ? SER A 151 ? SER A 243 SER A 256 1 ? 14 HELX_P HELX_P6 AA6 ASP A 165 ? ARG A 167 ? ASP A 270 ARG A 272 5 ? 3 HELX_P HELX_P7 AA7 ILE A 213 ? GLY A 215 ? ILE A 318 GLY A 320 5 ? 3 HELX_P HELX_P8 AA8 GLY A 222 ? LEU A 240 ? GLY A 327 LEU A 345 1 ? 19 HELX_P HELX_P9 AA9 THR A 244 ? ALA A 246 ? THR A 349 ALA A 351 5 ? 3 HELX_P HELX_P10 AB1 SER A 247 ? THR A 255 ? SER A 352 THR A 360 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 34 SG ? ? ? 1_555 A CYS 123 SG ? ? A CYS 139 A CYS 228 1_555 ? ? ? ? ? ? ? 2.024 ? ? disulf2 disulf ? ? A CYS 178 SG ? ? ? 1_555 A CYS 249 SG ? ? A CYS 283 A CYS 354 1_555 ? ? ? ? ? ? ? 2.033 ? ? metalc1 metalc ? ? A THR 16 O ? ? ? 1_555 C CA . CA ? ? A THR 121 A CA 402 1_555 ? ? ? ? ? ? ? 2.305 ? ? metalc2 metalc ? ? A PRO 175 O ? ? ? 1_555 B CA . CA ? ? A PRO 280 A CA 401 1_555 ? ? ? ? ? ? ? 2.508 ? ? metalc3 metalc ? ? A VAL 177 O ? ? ? 1_555 B CA . CA ? ? A VAL 282 A CA 401 1_555 ? ? ? ? ? ? ? 2.516 ? ? metalc4 metalc ? ? A ASP 200 OD1 ? ? ? 1_555 B CA . CA ? ? A ASP 305 A CA 401 1_555 ? ? ? ? ? ? ? 2.784 ? ? metalc5 metalc ? ? A ASP 200 OD2 ? ? ? 1_555 B CA . CA ? ? A ASP 305 A CA 401 1_555 ? ? ? ? ? ? ? 2.418 ? ? metalc6 metalc ? ? A ASP 260 OD1 ? ? ? 1_555 C CA . CA ? ? A ASP 365 A CA 402 1_555 ? ? ? ? ? ? ? 2.759 ? ? metalc7 metalc ? ? A ASP 260 OD2 ? ? ? 1_555 C CA . CA ? ? A ASP 365 A CA 402 1_555 ? ? ? ? ? ? ? 2.681 ? ? metalc8 metalc ? ? B CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 401 A HOH 540 1_555 ? ? ? ? ? ? ? 2.816 ? ? metalc9 metalc ? ? B CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 401 A HOH 567 1_555 ? ? ? ? ? ? ? 2.783 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 170 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 275 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 171 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 276 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.26 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 7 ? AA3 ? 2 ? AA4 ? 2 ? AA5 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? parallel AA2 3 4 ? parallel AA2 4 5 ? parallel AA2 5 6 ? parallel AA2 6 7 ? parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel AA5 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ALA A 2 ? GLN A 3 ? ALA A 107 GLN A 108 AA1 2 TYR A 23 ? TYR A 24 ? TYR A 128 TYR A 129 AA2 1 ALA A 53 ? THR A 58 ? ALA A 158 THR A 163 AA2 2 GLN A 89 ? LYS A 94 ? GLN A 194 LYS A 199 AA2 3 SER A 33 ? ASP A 39 ? SER A 138 ASP A 144 AA2 4 GLY A 126 ? LEU A 131 ? GLY A 231 LEU A 236 AA2 5 VAL A 153 ? ALA A 158 ? VAL A 258 ALA A 263 AA2 6 CYS A 178 ? SER A 183 ? CYS A 283 SER A 288 AA2 7 ILE A 201 ? PRO A 204 ? ILE A 306 PRO A 309 AA3 1 GLY A 135 ? GLY A 136 ? GLY A 240 GLY A 241 AA3 2 TYR A 169 ? SER A 170 ? TYR A 274 SER A 275 AA4 1 ILE A 208 ? TRP A 212 ? ILE A 313 TRP A 317 AA4 2 SER A 216 ? ILE A 220 ? SER A 321 ILE A 325 AA5 1 ASN A 257 ? LYS A 258 ? ASN A 362 LYS A 363 AA5 2 LEU A 271 ? LEU A 272 ? LEU A 376 LEU A 377 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLN A 3 ? N GLN A 108 O TYR A 23 ? O TYR A 128 AA2 1 2 N GLN A 54 ? N GLN A 159 O GLY A 92 ? O GLY A 197 AA2 2 3 O PHE A 91 ? O PHE A 196 N VAL A 37 ? N VAL A 142 AA2 3 4 N TYR A 36 ? N TYR A 141 O VAL A 128 ? O VAL A 233 AA2 4 5 N ALA A 129 ? N ALA A 234 O MET A 154 ? O MET A 259 AA2 5 6 N VAL A 155 ? N VAL A 260 O CYS A 178 ? O CYS A 283 AA2 6 7 N GLY A 181 ? N GLY A 286 O ILE A 201 ? O ILE A 306 AA3 1 2 N GLY A 135 ? N GLY A 240 O SER A 170 ? O SER A 275 AA4 1 2 N ILE A 208 ? N ILE A 313 O ILE A 220 ? O ILE A 325 AA5 1 2 N ASN A 257 ? N ASN A 362 O LEU A 272 ? O LEU A 377 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CA 401 ? 5 'binding site for residue CA A 401' AC2 Software A CA 402 ? 2 'binding site for residue CA A 402' AC3 Software A NO3 403 ? 4 'binding site for residue NO3 A 403' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 PRO A 175 ? PRO A 280 . ? 1_555 ? 2 AC1 5 VAL A 177 ? VAL A 282 . ? 1_555 ? 3 AC1 5 ASP A 200 ? ASP A 305 . ? 1_555 ? 4 AC1 5 HOH E . ? HOH A 540 . ? 1_555 ? 5 AC1 5 HOH E . ? HOH A 567 . ? 1_555 ? 6 AC2 2 THR A 16 ? THR A 121 . ? 1_555 ? 7 AC2 2 ASP A 260 ? ASP A 365 . ? 1_555 ? 8 AC3 4 ASP A 165 ? ASP A 270 . ? 1_555 ? 9 AC3 4 ARG A 167 ? ARG A 272 . ? 1_555 ? 10 AC3 4 ASN A 168 ? ASN A 273 . ? 1_555 ? 11 AC3 4 HOH E . ? HOH A 549 . ? 1_555 ? # _atom_sites.entry_id 6PQ4 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.014801 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014801 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009363 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C CA N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 106 106 ALA ALA A . n A 1 2 ALA 2 107 107 ALA ALA A . n A 1 3 GLN 3 108 108 GLN GLN A . n A 1 4 THR 4 109 109 THR THR A . n A 1 5 ASN 5 110 110 ASN ASN A . n A 1 6 ALA 6 111 111 ALA ALA A . n A 1 7 PRO 7 112 112 PRO PRO A . n A 1 8 TRP 8 113 113 TRP TRP A . n A 1 9 GLY 9 114 114 GLY GLY A . n A 1 10 LEU 10 115 115 LEU LEU A . n A 1 11 ALA 11 116 116 ALA ALA A . n A 1 12 ARG 12 117 117 ARG ARG A . n A 1 13 ILE 13 118 118 ILE ILE A . n A 1 14 SER 14 119 119 SER SER A . n A 1 15 SER 15 120 120 SER SER A . n A 1 16 THR 16 121 121 THR THR A . n A 1 17 SER 17 122 122 SER SER A . n A 1 18 PRO 18 123 123 PRO PRO A . n A 1 19 GLY 19 124 124 GLY GLY A . n A 1 20 THR 20 125 125 THR THR A . n A 1 21 SER 21 126 126 SER SER A . n A 1 22 THR 22 127 127 THR THR A . n A 1 23 TYR 23 128 128 TYR TYR A . n A 1 24 TYR 24 129 129 TYR TYR A . n A 1 25 TYR 25 130 130 TYR TYR A . n A 1 26 ASP 26 131 131 ASP ASP A . n A 1 27 GLU 27 132 132 GLU GLU A . n A 1 28 SER 28 133 133 SER SER A . n A 1 29 ALA 29 134 134 ALA ALA A . n A 1 30 GLY 30 135 135 GLY GLY A . n A 1 31 GLN 31 136 136 GLN GLN A . n A 1 32 GLY 32 137 137 GLY GLY A . n A 1 33 SER 33 138 138 SER SER A . n A 1 34 CYS 34 139 139 CYS CYS A . n A 1 35 VAL 35 140 140 VAL VAL A . n A 1 36 TYR 36 141 141 TYR TYR A . n A 1 37 VAL 37 142 142 VAL VAL A . n A 1 38 ILE 38 143 143 ILE ILE A . n A 1 39 ASP 39 144 144 ASP ASP A . n A 1 40 THR 40 145 145 THR THR A . n A 1 41 GLY 41 146 146 GLY GLY A . n A 1 42 ILE 42 147 147 ILE ILE A . n A 1 43 GLU 43 148 148 GLU GLU A . n A 1 44 ALA 44 149 149 ALA ALA A . n A 1 45 SER 45 150 150 SER SER A . n A 1 46 HIS 46 151 151 HIS HIS A . n A 1 47 PRO 47 152 152 PRO PRO A . n A 1 48 GLU 48 153 153 GLU GLU A . n A 1 49 PHE 49 154 154 PHE PHE A . n A 1 50 GLU 50 155 155 GLU GLU A . n A 1 51 GLY 51 156 156 GLY GLY A . n A 1 52 ARG 52 157 157 ARG ARG A . n A 1 53 ALA 53 158 158 ALA ALA A . n A 1 54 GLN 54 159 159 GLN GLN A . n A 1 55 MET 55 160 160 MET MET A . n A 1 56 VAL 56 161 161 VAL VAL A . n A 1 57 LYS 57 162 162 LYS LYS A . n A 1 58 THR 58 163 163 THR THR A . n A 1 59 TYR 59 164 164 TYR TYR A . n A 1 60 TYR 60 165 165 TYR TYR A . n A 1 61 TYR 61 166 166 TYR TYR A . n A 1 62 SER 62 167 167 SER SER A . n A 1 63 SER 63 168 168 SER SER A . n A 1 64 ARG 64 169 169 ARG ARG A . n A 1 65 ASP 65 170 170 ASP ASP A . n A 1 66 GLY 66 171 171 GLY GLY A . n A 1 67 ASN 67 172 172 ASN ASN A . n A 1 68 GLY 68 173 173 GLY GLY A . n A 1 69 HIS 69 174 174 HIS HIS A . n A 1 70 GLY 70 175 175 GLY GLY A . n A 1 71 THR 71 176 176 THR THR A . n A 1 72 HIS 72 177 177 HIS HIS A . n A 1 73 CYS 73 178 178 CYS CYS A . n A 1 74 ALA 74 179 179 ALA ALA A . n A 1 75 GLY 75 180 180 GLY GLY A . n A 1 76 THR 76 181 181 THR THR A . n A 1 77 VAL 77 182 182 VAL VAL A . n A 1 78 GLY 78 183 183 GLY GLY A . n A 1 79 SER 79 184 184 SER SER A . n A 1 80 ARG 80 185 185 ARG ARG A . n A 1 81 THR 81 186 186 THR THR A . n A 1 82 TYR 82 187 187 TYR TYR A . n A 1 83 GLY 83 188 188 GLY GLY A . n A 1 84 VAL 84 189 189 VAL VAL A . n A 1 85 ALA 85 190 190 ALA ALA A . n A 1 86 LYS 86 191 191 LYS LYS A . n A 1 87 LYS 87 192 192 LYS LYS A . n A 1 88 THR 88 193 193 THR THR A . n A 1 89 GLN 89 194 194 GLN GLN A . n A 1 90 LEU 90 195 195 LEU LEU A . n A 1 91 PHE 91 196 196 PHE PHE A . n A 1 92 GLY 92 197 197 GLY GLY A . n A 1 93 VAL 93 198 198 VAL VAL A . n A 1 94 LYS 94 199 199 LYS LYS A . n A 1 95 VAL 95 200 200 VAL VAL A . n A 1 96 LEU 96 201 201 LEU LEU A . n A 1 97 ASP 97 202 202 ASP ASP A . n A 1 98 ASP 98 203 203 ASP ASP A . n A 1 99 ASN 99 204 204 ASN ASN A . n A 1 100 GLY 100 205 205 GLY GLY A . n A 1 101 SER 101 206 206 SER SER A . n A 1 102 GLY 102 207 207 GLY GLY A . n A 1 103 GLN 103 208 208 GLN GLN A . n A 1 104 TYR 104 209 209 TYR TYR A . n A 1 105 SER 105 210 210 SER SER A . n A 1 106 THR 106 211 211 THR THR A . n A 1 107 ILE 107 212 212 ILE ILE A . n A 1 108 ILE 108 213 213 ILE ILE A . n A 1 109 ALA 109 214 214 ALA ALA A . n A 1 110 GLY 110 215 215 GLY GLY A . n A 1 111 MET 111 216 216 MET MET A . n A 1 112 ASP 112 217 217 ASP ASP A . n A 1 113 PHE 113 218 218 PHE PHE A . n A 1 114 VAL 114 219 219 VAL VAL A . n A 1 115 ALA 115 220 220 ALA ALA A . n A 1 116 SER 116 221 221 SER SER A . n A 1 117 ASP 117 222 222 ASP ASP A . n A 1 118 LYS 118 223 223 LYS LYS A . n A 1 119 ASN 119 224 224 ASN ASN A . n A 1 120 ASN 120 225 225 ASN ASN A . n A 1 121 ARG 121 226 226 ARG ARG A . n A 1 122 ASN 122 227 227 ASN ASN A . n A 1 123 CYS 123 228 228 CYS CYS A . n A 1 124 PRO 124 229 229 PRO PRO A . n A 1 125 LYS 125 230 230 LYS LYS A . n A 1 126 GLY 126 231 231 GLY GLY A . n A 1 127 VAL 127 232 232 VAL VAL A . n A 1 128 VAL 128 233 233 VAL VAL A . n A 1 129 ALA 129 234 234 ALA ALA A . n A 1 130 SER 130 235 235 SER SER A . n A 1 131 LEU 131 236 236 LEU LEU A . n A 1 132 SER 132 237 237 SER SER A . n A 1 133 LEU 133 238 238 LEU LEU A . n A 1 134 GLY 134 239 239 GLY GLY A . n A 1 135 GLY 135 240 240 GLY GLY A . n A 1 136 GLY 136 241 241 GLY GLY A . n A 1 137 TYR 137 242 242 TYR TYR A . n A 1 138 SER 138 243 243 SER SER A . n A 1 139 SER 139 244 244 SER SER A . n A 1 140 SER 140 245 245 SER SER A . n A 1 141 VAL 141 246 246 VAL VAL A . n A 1 142 ASN 142 247 247 ASN ASN A . n A 1 143 SER 143 248 248 SER SER A . n A 1 144 ALA 144 249 249 ALA ALA A . n A 1 145 ALA 145 250 250 ALA ALA A . n A 1 146 ALA 146 251 251 ALA ALA A . n A 1 147 ARG 147 252 252 ARG ARG A . n A 1 148 LEU 148 253 253 LEU LEU A . n A 1 149 GLN 149 254 254 GLN GLN A . n A 1 150 SER 150 255 255 SER SER A . n A 1 151 SER 151 256 256 SER SER A . n A 1 152 GLY 152 257 257 GLY GLY A . n A 1 153 VAL 153 258 258 VAL VAL A . n A 1 154 MET 154 259 259 MET MET A . n A 1 155 VAL 155 260 260 VAL VAL A . n A 1 156 ALA 156 261 261 ALA ALA A . n A 1 157 VAL 157 262 262 VAL VAL A . n A 1 158 ALA 158 263 263 ALA ALA A . n A 1 159 ALA 159 264 264 ALA ALA A . n A 1 160 GLY 160 265 265 GLY GLY A . n A 1 161 ASN 161 266 266 ASN ASN A . n A 1 162 ASN 162 267 267 ASN ASN A . n A 1 163 ASN 163 268 268 ASN ASN A . n A 1 164 ALA 164 269 269 ALA ALA A . n A 1 165 ASP 165 270 270 ASP ASP A . n A 1 166 ALA 166 271 271 ALA ALA A . n A 1 167 ARG 167 272 272 ARG ARG A . n A 1 168 ASN 168 273 273 ASN ASN A . n A 1 169 TYR 169 274 274 TYR TYR A . n A 1 170 SER 170 275 275 SER SER A . n A 1 171 PRO 171 276 276 PRO PRO A . n A 1 172 ALA 172 277 277 ALA ALA A . n A 1 173 SER 173 278 278 SER SER A . n A 1 174 GLU 174 279 279 GLU GLU A . n A 1 175 PRO 175 280 280 PRO PRO A . n A 1 176 SER 176 281 281 SER SER A . n A 1 177 VAL 177 282 282 VAL VAL A . n A 1 178 CYS 178 283 283 CYS CYS A . n A 1 179 THR 179 284 284 THR THR A . n A 1 180 VAL 180 285 285 VAL VAL A . n A 1 181 GLY 181 286 286 GLY GLY A . n A 1 182 ALA 182 287 287 ALA ALA A . n A 1 183 SER 183 288 288 SER SER A . n A 1 184 ASP 184 289 289 ASP ASP A . n A 1 185 ARG 185 290 290 ARG ARG A . n A 1 186 TYR 186 291 291 TYR TYR A . n A 1 187 ASP 187 292 292 ASP ASP A . n A 1 188 ARG 188 293 293 ARG ARG A . n A 1 189 ARG 189 294 294 ARG ARG A . n A 1 190 SER 190 295 295 SER SER A . n A 1 191 SER 191 296 296 SER SER A . n A 1 192 PHE 192 297 297 PHE PHE A . n A 1 193 SER 193 298 298 SER SER A . n A 1 194 ASN 194 299 299 ASN ASN A . n A 1 195 TYR 195 300 300 TYR TYR A . n A 1 196 GLY 196 301 301 GLY GLY A . n A 1 197 SER 197 302 302 SER SER A . n A 1 198 VAL 198 303 303 VAL VAL A . n A 1 199 LEU 199 304 304 LEU LEU A . n A 1 200 ASP 200 305 305 ASP ASP A . n A 1 201 ILE 201 306 306 ILE ILE A . n A 1 202 PHE 202 307 307 PHE PHE A . n A 1 203 GLY 203 308 308 GLY GLY A . n A 1 204 PRO 204 309 309 PRO PRO A . n A 1 205 GLY 205 310 310 GLY GLY A . n A 1 206 THR 206 311 311 THR THR A . n A 1 207 SER 207 312 312 SER SER A . n A 1 208 ILE 208 313 313 ILE ILE A . n A 1 209 LEU 209 314 314 LEU LEU A . n A 1 210 SER 210 315 315 SER SER A . n A 1 211 THR 211 316 316 THR THR A . n A 1 212 TRP 212 317 317 TRP TRP A . n A 1 213 ILE 213 318 318 ILE ILE A . n A 1 214 GLY 214 319 319 GLY GLY A . n A 1 215 GLY 215 320 320 GLY GLY A . n A 1 216 SER 216 321 321 SER SER A . n A 1 217 THR 217 322 322 THR THR A . n A 1 218 ARG 218 323 323 ARG ARG A . n A 1 219 SER 219 324 324 SER SER A . n A 1 220 ILE 220 325 325 ILE ILE A . n A 1 221 SER 221 326 326 SER SER A . n A 1 222 GLY 222 327 327 GLY GLY A . n A 1 223 THR 223 328 328 THR THR A . n A 1 224 SER 224 329 329 SER SER A . n A 1 225 MET 225 330 330 MET MET A . n A 1 226 ALA 226 331 331 ALA ALA A . n A 1 227 THR 227 332 332 THR THR A . n A 1 228 PRO 228 333 333 PRO PRO A . n A 1 229 HIS 229 334 334 HIS HIS A . n A 1 230 VAL 230 335 335 VAL VAL A . n A 1 231 ALA 231 336 336 ALA ALA A . n A 1 232 GLY 232 337 337 GLY GLY A . n A 1 233 LEU 233 338 338 LEU LEU A . n A 1 234 ALA 234 339 339 ALA ALA A . n A 1 235 ALA 235 340 340 ALA ALA A . n A 1 236 TYR 236 341 341 TYR TYR A . n A 1 237 LEU 237 342 342 LEU LEU A . n A 1 238 MET 238 343 343 MET MET A . n A 1 239 THR 239 344 344 THR THR A . n A 1 240 LEU 240 345 345 LEU LEU A . n A 1 241 GLY 241 346 346 GLY GLY A . n A 1 242 LYS 242 347 347 LYS LYS A . n A 1 243 THR 243 348 348 THR THR A . n A 1 244 THR 244 349 349 THR THR A . n A 1 245 ALA 245 350 350 ALA ALA A . n A 1 246 ALA 246 351 351 ALA ALA A . n A 1 247 SER 247 352 352 SER SER A . n A 1 248 ALA 248 353 353 ALA ALA A . n A 1 249 CYS 249 354 354 CYS CYS A . n A 1 250 ARG 250 355 355 ARG ARG A . n A 1 251 TYR 251 356 356 TYR TYR A . n A 1 252 ILE 252 357 357 ILE ILE A . n A 1 253 ALA 253 358 358 ALA ALA A . n A 1 254 ASP 254 359 359 ASP ASP A . n A 1 255 THR 255 360 360 THR THR A . n A 1 256 ALA 256 361 361 ALA ALA A . n A 1 257 ASN 257 362 362 ASN ASN A . n A 1 258 LYS 258 363 363 LYS LYS A . n A 1 259 GLY 259 364 364 GLY GLY A . n A 1 260 ASP 260 365 365 ASP ASP A . n A 1 261 LEU 261 366 366 LEU LEU A . n A 1 262 SER 262 367 367 SER SER A . n A 1 263 ASN 263 368 368 ASN ASN A . n A 1 264 ILE 264 369 369 ILE ILE A . n A 1 265 PRO 265 370 370 PRO PRO A . n A 1 266 PHE 266 371 371 PHE PHE A . n A 1 267 GLY 267 372 372 GLY GLY A . n A 1 268 THR 268 373 373 THR THR A . n A 1 269 VAL 269 374 374 VAL VAL A . n A 1 270 ASN 270 375 375 ASN ASN A . n A 1 271 LEU 271 376 376 LEU LEU A . n A 1 272 LEU 272 377 377 LEU LEU A . n A 1 273 ALA 273 378 378 ALA ALA A . n A 1 274 TYR 274 379 379 TYR TYR A . n A 1 275 ASN 275 380 380 ASN ASN A . n A 1 276 ASN 276 381 381 ASN ASN A . n A 1 277 TYR 277 382 382 TYR TYR A . n A 1 278 GLN 278 383 383 GLN GLN A . n A 1 279 ALA 279 384 384 ALA ALA A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA 1 401 1 CA CA A . C 2 CA 1 402 2 CA CA A . D 3 NO3 1 403 1 NO3 NO3 A . E 4 HOH 1 501 54 HOH HOH A . E 4 HOH 2 502 86 HOH HOH A . E 4 HOH 3 503 50 HOH HOH A . E 4 HOH 4 504 5 HOH HOH A . E 4 HOH 5 505 74 HOH HOH A . E 4 HOH 6 506 64 HOH HOH A . E 4 HOH 7 507 49 HOH HOH A . E 4 HOH 8 508 28 HOH HOH A . E 4 HOH 9 509 6 HOH HOH A . E 4 HOH 10 510 31 HOH HOH A . E 4 HOH 11 511 40 HOH HOH A . E 4 HOH 12 512 73 HOH HOH A . E 4 HOH 13 513 9 HOH HOH A . E 4 HOH 14 514 55 HOH HOH A . E 4 HOH 15 515 13 HOH HOH A . E 4 HOH 16 516 67 HOH HOH A . E 4 HOH 17 517 14 HOH HOH A . E 4 HOH 18 518 17 HOH HOH A . E 4 HOH 19 519 24 HOH HOH A . E 4 HOH 20 520 53 HOH HOH A . E 4 HOH 21 521 65 HOH HOH A . E 4 HOH 22 522 21 HOH HOH A . E 4 HOH 23 523 83 HOH HOH A . E 4 HOH 24 524 51 HOH HOH A . E 4 HOH 25 525 45 HOH HOH A . E 4 HOH 26 526 10 HOH HOH A . E 4 HOH 27 527 4 HOH HOH A . E 4 HOH 28 528 81 HOH HOH A . E 4 HOH 29 529 2 HOH HOH A . E 4 HOH 30 530 3 HOH HOH A . E 4 HOH 31 531 71 HOH HOH A . E 4 HOH 32 532 43 HOH HOH A . E 4 HOH 33 533 23 HOH HOH A . E 4 HOH 34 534 8 HOH HOH A . E 4 HOH 35 535 15 HOH HOH A . E 4 HOH 36 536 61 HOH HOH A . E 4 HOH 37 537 32 HOH HOH A . E 4 HOH 38 538 30 HOH HOH A . E 4 HOH 39 539 66 HOH HOH A . E 4 HOH 40 540 56 HOH HOH A . E 4 HOH 41 541 90 HOH HOH A . E 4 HOH 42 542 22 HOH HOH A . E 4 HOH 43 543 36 HOH HOH A . E 4 HOH 44 544 75 HOH HOH A . E 4 HOH 45 545 38 HOH HOH A . E 4 HOH 46 546 1 HOH HOH A . E 4 HOH 47 547 69 HOH HOH A . E 4 HOH 48 548 7 HOH HOH A . E 4 HOH 49 549 57 HOH HOH A . E 4 HOH 50 550 87 HOH HOH A . E 4 HOH 51 551 29 HOH HOH A . E 4 HOH 52 552 26 HOH HOH A . E 4 HOH 53 553 18 HOH HOH A . E 4 HOH 54 554 37 HOH HOH A . E 4 HOH 55 555 33 HOH HOH A . E 4 HOH 56 556 62 HOH HOH A . E 4 HOH 57 557 48 HOH HOH A . E 4 HOH 58 558 41 HOH HOH A . E 4 HOH 59 559 35 HOH HOH A . E 4 HOH 60 560 47 HOH HOH A . E 4 HOH 61 561 25 HOH HOH A . E 4 HOH 62 562 12 HOH HOH A . E 4 HOH 63 563 92 HOH HOH A . E 4 HOH 64 564 46 HOH HOH A . E 4 HOH 65 565 78 HOH HOH A . E 4 HOH 66 566 68 HOH HOH A . E 4 HOH 67 567 91 HOH HOH A . E 4 HOH 68 568 63 HOH HOH A . E 4 HOH 69 569 16 HOH HOH A . E 4 HOH 70 570 79 HOH HOH A . E 4 HOH 71 571 72 HOH HOH A . E 4 HOH 72 572 52 HOH HOH A . E 4 HOH 73 573 34 HOH HOH A . E 4 HOH 74 574 76 HOH HOH A . E 4 HOH 75 575 82 HOH HOH A . E 4 HOH 76 576 58 HOH HOH A . E 4 HOH 77 577 84 HOH HOH A . E 4 HOH 78 578 39 HOH HOH A . E 4 HOH 79 579 85 HOH HOH A . E 4 HOH 80 580 77 HOH HOH A . E 4 HOH 81 581 93 HOH HOH A . E 4 HOH 82 582 59 HOH HOH A . E 4 HOH 83 583 19 HOH HOH A . E 4 HOH 84 584 27 HOH HOH A . E 4 HOH 85 585 44 HOH HOH A . E 4 HOH 86 586 20 HOH HOH A . E 4 HOH 87 587 60 HOH HOH A . E 4 HOH 88 588 94 HOH HOH A . E 4 HOH 89 589 97 HOH HOH A . E 4 HOH 90 590 89 HOH HOH A . E 4 HOH 91 591 70 HOH HOH A . E 4 HOH 92 592 96 HOH HOH A . E 4 HOH 93 593 80 HOH HOH A . E 4 HOH 94 594 95 HOH HOH A . E 4 HOH 95 595 88 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 300 ? 1 MORE -19 ? 1 'SSA (A^2)' 10340 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 509 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id E _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A THR 16 ? A THR 121 ? 1_555 CA ? C CA . ? A CA 402 ? 1_555 OD1 ? A ASP 260 ? A ASP 365 ? 1_555 122.9 ? 2 O ? A THR 16 ? A THR 121 ? 1_555 CA ? C CA . ? A CA 402 ? 1_555 OD2 ? A ASP 260 ? A ASP 365 ? 1_555 75.3 ? 3 OD1 ? A ASP 260 ? A ASP 365 ? 1_555 CA ? C CA . ? A CA 402 ? 1_555 OD2 ? A ASP 260 ? A ASP 365 ? 1_555 47.6 ? 4 O ? A PRO 175 ? A PRO 280 ? 1_555 CA ? B CA . ? A CA 401 ? 1_555 O ? A VAL 177 ? A VAL 282 ? 1_555 89.7 ? 5 O ? A PRO 175 ? A PRO 280 ? 1_555 CA ? B CA . ? A CA 401 ? 1_555 OD1 ? A ASP 200 ? A ASP 305 ? 1_555 150.6 ? 6 O ? A VAL 177 ? A VAL 282 ? 1_555 CA ? B CA . ? A CA 401 ? 1_555 OD1 ? A ASP 200 ? A ASP 305 ? 1_555 117.2 ? 7 O ? A PRO 175 ? A PRO 280 ? 1_555 CA ? B CA . ? A CA 401 ? 1_555 OD2 ? A ASP 200 ? A ASP 305 ? 1_555 159.9 ? 8 O ? A VAL 177 ? A VAL 282 ? 1_555 CA ? B CA . ? A CA 401 ? 1_555 OD2 ? A ASP 200 ? A ASP 305 ? 1_555 71.9 ? 9 OD1 ? A ASP 200 ? A ASP 305 ? 1_555 CA ? B CA . ? A CA 401 ? 1_555 OD2 ? A ASP 200 ? A ASP 305 ? 1_555 49.5 ? 10 O ? A PRO 175 ? A PRO 280 ? 1_555 CA ? B CA . ? A CA 401 ? 1_555 O ? E HOH . ? A HOH 540 ? 1_555 96.5 ? 11 O ? A VAL 177 ? A VAL 282 ? 1_555 CA ? B CA . ? A CA 401 ? 1_555 O ? E HOH . ? A HOH 540 ? 1_555 144.6 ? 12 OD1 ? A ASP 200 ? A ASP 305 ? 1_555 CA ? B CA . ? A CA 401 ? 1_555 O ? E HOH . ? A HOH 540 ? 1_555 68.8 ? 13 OD2 ? A ASP 200 ? A ASP 305 ? 1_555 CA ? B CA . ? A CA 401 ? 1_555 O ? E HOH . ? A HOH 540 ? 1_555 94.2 ? 14 O ? A PRO 175 ? A PRO 280 ? 1_555 CA ? B CA . ? A CA 401 ? 1_555 O ? E HOH . ? A HOH 567 ? 1_555 104.5 ? 15 O ? A VAL 177 ? A VAL 282 ? 1_555 CA ? B CA . ? A CA 401 ? 1_555 O ? E HOH . ? A HOH 567 ? 1_555 71.0 ? 16 OD1 ? A ASP 200 ? A ASP 305 ? 1_555 CA ? B CA . ? A CA 401 ? 1_555 O ? E HOH . ? A HOH 567 ? 1_555 76.1 ? 17 OD2 ? A ASP 200 ? A ASP 305 ? 1_555 CA ? B CA . ? A CA 401 ? 1_555 O ? E HOH . ? A HOH 567 ? 1_555 77.6 ? 18 O ? E HOH . ? A HOH 540 ? 1_555 CA ? B CA . ? A CA 401 ? 1_555 O ? E HOH . ? A HOH 567 ? 1_555 139.1 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-08-05 2 'Structure model' 1 1 2020-08-12 3 'Structure model' 1 2 2020-10-21 4 'Structure model' 1 3 2023-10-11 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation 4 4 'Structure model' chem_comp_atom 5 4 'Structure model' chem_comp_bond 6 4 'Structure model' database_2 7 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.pdbx_database_id_PubMed' 2 2 'Structure model' '_citation.title' 3 3 'Structure model' '_citation.journal_volume' 4 3 'Structure model' '_citation.page_first' 5 3 'Structure model' '_citation.page_last' 6 4 'Structure model' '_database_2.pdbx_DOI' 7 4 'Structure model' '_database_2.pdbx_database_accession' # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -y+1/2,x+1/2,z+3/4 3 y+1/2,-x+1/2,z+1/4 4 x+1/2,-y+1/2,-z+1/4 5 -x+1/2,y+1/2,-z+3/4 6 -x,-y,z+1/2 7 y,x,-z 8 -y,-x,-z+1/2 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.dependencies _software.description _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.pdbx_ordinal _software.type _software.version ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? 1 ? . ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? 2 ? . ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? iMOSFLM ? ? 3 ? . ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? 4 ? . # _pdbx_entry_details.entry_id 6PQ4 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y # _em_3d_fitting.entry_id 6PQ4 _em_3d_fitting.id 1 _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_protocol OTHER _em_3d_fitting.ref_space ? _em_3d_fitting.target_criteria ? _em_3d_fitting.method ? # _em_3d_reconstruction.entry_id 6PQ4 _em_3d_reconstruction.id 1 _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.details ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.num_particles ? _em_3d_reconstruction.resolution 2.0 _em_3d_reconstruction.resolution_method 'DIFFRACTION PATTERN/LAYERLINES' _em_3d_reconstruction.symmetry_type '3D CRYSTAL' _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? # _em_buffer.id 1 _em_buffer.details ? _em_buffer.pH 6.5 _em_buffer.specimen_id 1 _em_buffer.name ? # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.details ? _em_entity_assembly.name 'Proteinase K' _em_entity_assembly.source NATURAL _em_entity_assembly.type COMPLEX _em_entity_assembly.entity_id_list 1 _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? # _em_imaging.id 1 _em_imaging.entry_id 6PQ4 _em_imaging.accelerating_voltage 200 _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.calibrated_defocus_max ? _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_magnification ? _em_imaging.cryogen NITROGEN _em_imaging.details ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.illumination_mode OTHER _em_imaging.microscope_model 'FEI TECNAI F20' _em_imaging.mode DIFFRACTION _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_max ? _em_imaging.nominal_defocus_min ? _em_imaging.nominal_magnification ? _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.residual_tilt ? _em_imaging.specimen_holder_model ? _em_imaging.specimen_id 1 _em_imaging.citation_id ? _em_imaging.date ? _em_imaging.temperature ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.specimen_holder_type ? # _em_sample_support.id 1 _em_sample_support.specimen_id 1 _em_sample_support.details unspecified _em_sample_support.grid_material ? _em_sample_support.grid_mesh_size ? _em_sample_support.grid_type ? _em_sample_support.method ? _em_sample_support.film_material ? # _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.chamber_temperature ? _em_vitrification.cryogen_name ETHANE _em_vitrification.details ? _em_vitrification.humidity ? _em_vitrification.instrument ? _em_vitrification.entry_id 6PQ4 _em_vitrification.citation_id ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 6PQ4 _em_experiment.id 1 _em_experiment.aggregation_state '3D ARRAY' _em_experiment.reconstruction_method CRYSTALLOGRAPHY _em_experiment.entity_assembly_id 1 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 144 ? ? -154.98 -141.64 2 1 ASN A 375 ? ? -105.08 63.20 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CA CA CA N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 GLN N N N N 89 GLN CA C N S 90 GLN C C N N 91 GLN O O N N 92 GLN CB C N N 93 GLN CG C N N 94 GLN CD C N N 95 GLN OE1 O N N 96 GLN NE2 N N N 97 GLN OXT O N N 98 GLN H H N N 99 GLN H2 H N N 100 GLN HA H N N 101 GLN HB2 H N N 102 GLN HB3 H N N 103 GLN HG2 H N N 104 GLN HG3 H N N 105 GLN HE21 H N N 106 GLN HE22 H N N 107 GLN HXT H N N 108 GLU N N N N 109 GLU CA C N S 110 GLU C C N N 111 GLU O O N N 112 GLU CB C N N 113 GLU CG C N N 114 GLU CD C N N 115 GLU OE1 O N N 116 GLU OE2 O N N 117 GLU OXT O N N 118 GLU H H N N 119 GLU H2 H N N 120 GLU HA H N N 121 GLU HB2 H N N 122 GLU HB3 H N N 123 GLU HG2 H N N 124 GLU HG3 H N N 125 GLU HE2 H N N 126 GLU HXT H N N 127 GLY N N N N 128 GLY CA C N N 129 GLY C C N N 130 GLY O O N N 131 GLY OXT O N N 132 GLY H H N N 133 GLY H2 H N N 134 GLY HA2 H N N 135 GLY HA3 H N N 136 GLY HXT H N N 137 HIS N N N N 138 HIS CA C N S 139 HIS C C N N 140 HIS O O N N 141 HIS CB C N N 142 HIS CG C Y N 143 HIS ND1 N Y N 144 HIS CD2 C Y N 145 HIS CE1 C Y N 146 HIS NE2 N Y N 147 HIS OXT O N N 148 HIS H H N N 149 HIS H2 H N N 150 HIS HA H N N 151 HIS HB2 H N N 152 HIS HB3 H N N 153 HIS HD1 H N N 154 HIS HD2 H N N 155 HIS HE1 H N N 156 HIS HE2 H N N 157 HIS HXT H N N 158 HOH O O N N 159 HOH H1 H N N 160 HOH H2 H N N 161 ILE N N N N 162 ILE CA C N S 163 ILE C C N N 164 ILE O O N N 165 ILE CB C N S 166 ILE CG1 C N N 167 ILE CG2 C N N 168 ILE CD1 C N N 169 ILE OXT O N N 170 ILE H H N N 171 ILE H2 H N N 172 ILE HA H N N 173 ILE HB H N N 174 ILE HG12 H N N 175 ILE HG13 H N N 176 ILE HG21 H N N 177 ILE HG22 H N N 178 ILE HG23 H N N 179 ILE HD11 H N N 180 ILE HD12 H N N 181 ILE HD13 H N N 182 ILE HXT H N N 183 LEU N N N N 184 LEU CA C N S 185 LEU C C N N 186 LEU O O N N 187 LEU CB C N N 188 LEU CG C N N 189 LEU CD1 C N N 190 LEU CD2 C N N 191 LEU OXT O N N 192 LEU H H N N 193 LEU H2 H N N 194 LEU HA H N N 195 LEU HB2 H N N 196 LEU HB3 H N N 197 LEU HG H N N 198 LEU HD11 H N N 199 LEU HD12 H N N 200 LEU HD13 H N N 201 LEU HD21 H N N 202 LEU HD22 H N N 203 LEU HD23 H N N 204 LEU HXT H N N 205 LYS N N N N 206 LYS CA C N S 207 LYS C C N N 208 LYS O O N N 209 LYS CB C N N 210 LYS CG C N N 211 LYS CD C N N 212 LYS CE C N N 213 LYS NZ N N N 214 LYS OXT O N N 215 LYS H H N N 216 LYS H2 H N N 217 LYS HA H N N 218 LYS HB2 H N N 219 LYS HB3 H N N 220 LYS HG2 H N N 221 LYS HG3 H N N 222 LYS HD2 H N N 223 LYS HD3 H N N 224 LYS HE2 H N N 225 LYS HE3 H N N 226 LYS HZ1 H N N 227 LYS HZ2 H N N 228 LYS HZ3 H N N 229 LYS HXT H N N 230 MET N N N N 231 MET CA C N S 232 MET C C N N 233 MET O O N N 234 MET CB C N N 235 MET CG C N N 236 MET SD S N N 237 MET CE C N N 238 MET OXT O N N 239 MET H H N N 240 MET H2 H N N 241 MET HA H N N 242 MET HB2 H N N 243 MET HB3 H N N 244 MET HG2 H N N 245 MET HG3 H N N 246 MET HE1 H N N 247 MET HE2 H N N 248 MET HE3 H N N 249 MET HXT H N N 250 NO3 N N N N 251 NO3 O1 O N N 252 NO3 O2 O N N 253 NO3 O3 O N N 254 PHE N N N N 255 PHE CA C N S 256 PHE C C N N 257 PHE O O N N 258 PHE CB C N N 259 PHE CG C Y N 260 PHE CD1 C Y N 261 PHE CD2 C Y N 262 PHE CE1 C Y N 263 PHE CE2 C Y N 264 PHE CZ C Y N 265 PHE OXT O N N 266 PHE H H N N 267 PHE H2 H N N 268 PHE HA H N N 269 PHE HB2 H N N 270 PHE HB3 H N N 271 PHE HD1 H N N 272 PHE HD2 H N N 273 PHE HE1 H N N 274 PHE HE2 H N N 275 PHE HZ H N N 276 PHE HXT H N N 277 PRO N N N N 278 PRO CA C N S 279 PRO C C N N 280 PRO O O N N 281 PRO CB C N N 282 PRO CG C N N 283 PRO CD C N N 284 PRO OXT O N N 285 PRO H H N N 286 PRO HA H N N 287 PRO HB2 H N N 288 PRO HB3 H N N 289 PRO HG2 H N N 290 PRO HG3 H N N 291 PRO HD2 H N N 292 PRO HD3 H N N 293 PRO HXT H N N 294 SER N N N N 295 SER CA C N S 296 SER C C N N 297 SER O O N N 298 SER CB C N N 299 SER OG O N N 300 SER OXT O N N 301 SER H H N N 302 SER H2 H N N 303 SER HA H N N 304 SER HB2 H N N 305 SER HB3 H N N 306 SER HG H N N 307 SER HXT H N N 308 THR N N N N 309 THR CA C N S 310 THR C C N N 311 THR O O N N 312 THR CB C N R 313 THR OG1 O N N 314 THR CG2 C N N 315 THR OXT O N N 316 THR H H N N 317 THR H2 H N N 318 THR HA H N N 319 THR HB H N N 320 THR HG1 H N N 321 THR HG21 H N N 322 THR HG22 H N N 323 THR HG23 H N N 324 THR HXT H N N 325 TRP N N N N 326 TRP CA C N S 327 TRP C C N N 328 TRP O O N N 329 TRP CB C N N 330 TRP CG C Y N 331 TRP CD1 C Y N 332 TRP CD2 C Y N 333 TRP NE1 N Y N 334 TRP CE2 C Y N 335 TRP CE3 C Y N 336 TRP CZ2 C Y N 337 TRP CZ3 C Y N 338 TRP CH2 C Y N 339 TRP OXT O N N 340 TRP H H N N 341 TRP H2 H N N 342 TRP HA H N N 343 TRP HB2 H N N 344 TRP HB3 H N N 345 TRP HD1 H N N 346 TRP HE1 H N N 347 TRP HE3 H N N 348 TRP HZ2 H N N 349 TRP HZ3 H N N 350 TRP HH2 H N N 351 TRP HXT H N N 352 TYR N N N N 353 TYR CA C N S 354 TYR C C N N 355 TYR O O N N 356 TYR CB C N N 357 TYR CG C Y N 358 TYR CD1 C Y N 359 TYR CD2 C Y N 360 TYR CE1 C Y N 361 TYR CE2 C Y N 362 TYR CZ C Y N 363 TYR OH O N N 364 TYR OXT O N N 365 TYR H H N N 366 TYR H2 H N N 367 TYR HA H N N 368 TYR HB2 H N N 369 TYR HB3 H N N 370 TYR HD1 H N N 371 TYR HD2 H N N 372 TYR HE1 H N N 373 TYR HE2 H N N 374 TYR HH H N N 375 TYR HXT H N N 376 VAL N N N N 377 VAL CA C N S 378 VAL C C N N 379 VAL O O N N 380 VAL CB C N N 381 VAL CG1 C N N 382 VAL CG2 C N N 383 VAL OXT O N N 384 VAL H H N N 385 VAL H2 H N N 386 VAL HA H N N 387 VAL HB H N N 388 VAL HG11 H N N 389 VAL HG12 H N N 390 VAL HG13 H N N 391 VAL HG21 H N N 392 VAL HG22 H N N 393 VAL HG23 H N N 394 VAL HXT H N N 395 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 NO3 N O1 doub N N 237 NO3 N O2 sing N N 238 NO3 N O3 sing N N 239 PHE N CA sing N N 240 PHE N H sing N N 241 PHE N H2 sing N N 242 PHE CA C sing N N 243 PHE CA CB sing N N 244 PHE CA HA sing N N 245 PHE C O doub N N 246 PHE C OXT sing N N 247 PHE CB CG sing N N 248 PHE CB HB2 sing N N 249 PHE CB HB3 sing N N 250 PHE CG CD1 doub Y N 251 PHE CG CD2 sing Y N 252 PHE CD1 CE1 sing Y N 253 PHE CD1 HD1 sing N N 254 PHE CD2 CE2 doub Y N 255 PHE CD2 HD2 sing N N 256 PHE CE1 CZ doub Y N 257 PHE CE1 HE1 sing N N 258 PHE CE2 CZ sing Y N 259 PHE CE2 HE2 sing N N 260 PHE CZ HZ sing N N 261 PHE OXT HXT sing N N 262 PRO N CA sing N N 263 PRO N CD sing N N 264 PRO N H sing N N 265 PRO CA C sing N N 266 PRO CA CB sing N N 267 PRO CA HA sing N N 268 PRO C O doub N N 269 PRO C OXT sing N N 270 PRO CB CG sing N N 271 PRO CB HB2 sing N N 272 PRO CB HB3 sing N N 273 PRO CG CD sing N N 274 PRO CG HG2 sing N N 275 PRO CG HG3 sing N N 276 PRO CD HD2 sing N N 277 PRO CD HD3 sing N N 278 PRO OXT HXT sing N N 279 SER N CA sing N N 280 SER N H sing N N 281 SER N H2 sing N N 282 SER CA C sing N N 283 SER CA CB sing N N 284 SER CA HA sing N N 285 SER C O doub N N 286 SER C OXT sing N N 287 SER CB OG sing N N 288 SER CB HB2 sing N N 289 SER CB HB3 sing N N 290 SER OG HG sing N N 291 SER OXT HXT sing N N 292 THR N CA sing N N 293 THR N H sing N N 294 THR N H2 sing N N 295 THR CA C sing N N 296 THR CA CB sing N N 297 THR CA HA sing N N 298 THR C O doub N N 299 THR C OXT sing N N 300 THR CB OG1 sing N N 301 THR CB CG2 sing N N 302 THR CB HB sing N N 303 THR OG1 HG1 sing N N 304 THR CG2 HG21 sing N N 305 THR CG2 HG22 sing N N 306 THR CG2 HG23 sing N N 307 THR OXT HXT sing N N 308 TRP N CA sing N N 309 TRP N H sing N N 310 TRP N H2 sing N N 311 TRP CA C sing N N 312 TRP CA CB sing N N 313 TRP CA HA sing N N 314 TRP C O doub N N 315 TRP C OXT sing N N 316 TRP CB CG sing N N 317 TRP CB HB2 sing N N 318 TRP CB HB3 sing N N 319 TRP CG CD1 doub Y N 320 TRP CG CD2 sing Y N 321 TRP CD1 NE1 sing Y N 322 TRP CD1 HD1 sing N N 323 TRP CD2 CE2 doub Y N 324 TRP CD2 CE3 sing Y N 325 TRP NE1 CE2 sing Y N 326 TRP NE1 HE1 sing N N 327 TRP CE2 CZ2 sing Y N 328 TRP CE3 CZ3 doub Y N 329 TRP CE3 HE3 sing N N 330 TRP CZ2 CH2 doub Y N 331 TRP CZ2 HZ2 sing N N 332 TRP CZ3 CH2 sing Y N 333 TRP CZ3 HZ3 sing N N 334 TRP CH2 HH2 sing N N 335 TRP OXT HXT sing N N 336 TYR N CA sing N N 337 TYR N H sing N N 338 TYR N H2 sing N N 339 TYR CA C sing N N 340 TYR CA CB sing N N 341 TYR CA HA sing N N 342 TYR C O doub N N 343 TYR C OXT sing N N 344 TYR CB CG sing N N 345 TYR CB HB2 sing N N 346 TYR CB HB3 sing N N 347 TYR CG CD1 doub Y N 348 TYR CG CD2 sing Y N 349 TYR CD1 CE1 sing Y N 350 TYR CD1 HD1 sing N N 351 TYR CD2 CE2 doub Y N 352 TYR CD2 HD2 sing N N 353 TYR CE1 CZ doub Y N 354 TYR CE1 HE1 sing N N 355 TYR CE2 CZ sing Y N 356 TYR CE2 HE2 sing N N 357 TYR CZ OH sing N N 358 TYR OH HH sing N N 359 TYR OXT HXT sing N N 360 VAL N CA sing N N 361 VAL N H sing N N 362 VAL N H2 sing N N 363 VAL CA C sing N N 364 VAL CA CB sing N N 365 VAL CA HA sing N N 366 VAL C O doub N N 367 VAL C OXT sing N N 368 VAL CB CG1 sing N N 369 VAL CB CG2 sing N N 370 VAL CB HB sing N N 371 VAL CG1 HG11 sing N N 372 VAL CG1 HG12 sing N N 373 VAL CG1 HG13 sing N N 374 VAL CG2 HG21 sing N N 375 VAL CG2 HG22 sing N N 376 VAL CG2 HG23 sing N N 377 VAL OXT HXT sing N N 378 # _em_3d_crystal_entity.id 1 _em_3d_crystal_entity.image_processing_id 1 _em_3d_crystal_entity.angle_alpha 90 _em_3d_crystal_entity.angle_beta 90 _em_3d_crystal_entity.angle_gamma 90 _em_3d_crystal_entity.length_a 67.56 _em_3d_crystal_entity.length_b 67.56 _em_3d_crystal_entity.length_c 106.8 _em_3d_crystal_entity.space_group_name 'P 43 21 2' _em_3d_crystal_entity.space_group_num 96 # _em_crystal_formation.id 1 _em_crystal_formation.specimen_id 1 _em_crystal_formation.atmosphere ? _em_crystal_formation.details ? _em_crystal_formation.instrument ? _em_crystal_formation.lipid_mixture ? _em_crystal_formation.lipid_protein_ratio ? _em_crystal_formation.temperature ? _em_crystal_formation.time ? _em_crystal_formation.time_unit ? # _em_ctf_correction.id 1 _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.type NONE _em_ctf_correction.details ? # _em_diffraction.id 1 _em_diffraction.camera_length 1940 _em_diffraction.imaging_id 1 _em_diffraction.tilt_angle_list ? # _em_diffraction_shell.id 1 _em_diffraction_shell.em_diffraction_stats_id 1 _em_diffraction_shell.fourier_space_coverage 94.8 _em_diffraction_shell.high_resolution 2.05 _em_diffraction_shell.low_resolution 2.00 _em_diffraction_shell.multiplicity 5.4 _em_diffraction_shell.num_structure_factors 1191 _em_diffraction_shell.phase_residual 0.00001 # _em_diffraction_stats.id 1 _em_diffraction_stats.details ? _em_diffraction_stats.image_processing_id 1 _em_diffraction_stats.fourier_space_coverage 94.6 _em_diffraction_stats.high_resolution 2.0 _em_diffraction_stats.num_intensities_measured 85421 _em_diffraction_stats.num_structure_factors 16351 _em_diffraction_stats.overall_phase_error 0 _em_diffraction_stats.overall_phase_residual 0.00001 _em_diffraction_stats.phase_error_rejection_criteria 0 _em_diffraction_stats.r_merge 40.4 _em_diffraction_stats.r_sym 40.4 # _em_entity_assembly_naturalsource.id 1 _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.ncbi_tax_id 37998 _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organism 'Parengyodontium album' _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.avg_electron_dose_per_image 0.04 _em_image_recording.average_exposure_time 4 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'TVIPS TEMCAM-F416 (4k x 4k)' _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # _em_imaging_optics.id 1 _em_imaging_optics.imaging_id 1 _em_imaging_optics.chr_aberration_corrector ? _em_imaging_optics.energyfilter_lower ? _em_imaging_optics.energyfilter_name ? _em_imaging_optics.energyfilter_upper ? _em_imaging_optics.energyfilter_slit_width ? _em_imaging_optics.phase_plate ? _em_imaging_optics.sph_aberration_corrector ? # loop_ _em_software.id _em_software.category _em_software.details _em_software.name _em_software.version _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id 1 'IMAGE ACQUISITION' ? ? ? ? ? 1 2 MASKING ? ? ? ? ? ? 3 'CTF CORRECTION' ? ? ? 1 ? ? 4 'LAYERLINE INDEXING' ? ? ? ? ? ? 5 'DIFFRACTION INDEXING' ? ? ? ? ? ? 6 'MODEL FITTING' ? ? ? ? 1 ? 7 OTHER ? ? ? ? ? ? 8 'MOLECULAR REPLACEMENT' 'Phaser using search model ID 2ID8' PHENIX 1.13-2998 1 ? ? 9 'LATTICE DISTORTION CORRECTION' ? ? ? 1 ? ? 10 'SYMMETRY DETERMINATION' ? ? ? 1 ? ? 11 'CRYSTALLOGRAPHY MERGING' ? 'CCP4 package' 7.0.058 1 ? ? 12 RECONSTRUCTION ? PHENIX 1.13-2998 1 ? ? 13 'MODEL REFINEMENT' ? ? ? ? 1 ? # _em_specimen.id 1 _em_specimen.experiment_id 1 _em_specimen.concentration 40 _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Science Foundation (NSF, United States)' 'United States' 'NSF MRI 1531991' 1 'National Science Foundation (NSF, United States)' 'United States' 1231306 2 'National Institutes of Health/National Institute on Drug Abuse (NIH/NIDA)' 'United States' R21DA042298 3 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' R01GM124152 4 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id CA _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id CA _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CALCIUM ION' CA 3 'NITRATE ION' NO3 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2ID8 _pdbx_initial_refinement_model.details 'PDB entry 2ID8' # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support microscopy _pdbx_struct_assembly_auth_evidence.details ? # _space_group.crystal_system tetragonal _space_group.name_H-M_alt 'P 43 21 2' _space_group.IT_number 96 _space_group.name_Hall 'P 4nw 2abw' _space_group.id 1 #