HEADER CIRCADIAN CLOCK PROTEIN 16-JUL-19 6PTZ TITLE CRYSTAL STRUCTURE OF PIGEON CRYPTOCHROME 4 MUTANT Y319D IN COMPLEX TITLE 2 WITH FLAVIN ADENINE DINUCLEOTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CRYPTOCHROME-1; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: COLUMBA LIVIA; SOURCE 3 ORGANISM_COMMON: ROCK DOVE; SOURCE 4 ORGANISM_TAXID: 8932; SOURCE 5 GENE: A306_00007326; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS MAGNETOSENSOR, PHOTOLYASE, CIRCADIAN CLOCK PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR B.D.ZOLTOWSKI,Y.CHELLIAH,A.C.WICKRAMARATNE,L.JAROCHA,N.KARKI, AUTHOR 2 H.MOURITSEN,P.J.HORE,R.E.HIBBS,C.B.GREEN,J.S.TAKAHASHI REVDAT 5 11-OCT-23 6PTZ 1 REMARK REVDAT 4 27-NOV-19 6PTZ 1 REMARK REVDAT 3 09-OCT-19 6PTZ 1 JRNL REVDAT 2 18-SEP-19 6PTZ 1 JRNL REVDAT 1 04-SEP-19 6PTZ 0 JRNL AUTH B.D.ZOLTOWSKI,Y.CHELLIAH,A.WICKRAMARATNE,L.JAROCHA,N.KARKI, JRNL AUTH 2 W.XU,H.MOURITSEN,P.J.HORE,R.E.HIBBS,C.B.GREEN,J.S.TAKAHASHI JRNL TITL CHEMICAL AND STRUCTURAL ANALYSIS OF A PHOTOACTIVE VERTEBRATE JRNL TITL 2 CRYPTOCHROME FROM PIGEON. JRNL REF PROC.NATL.ACAD.SCI.USA V. 116 19449 2019 JRNL REFN ESSN 1091-6490 JRNL PMID 31484780 JRNL DOI 10.1073/PNAS.1907875116 REMARK 2 REMARK 2 RESOLUTION. 1.79 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.12_2829 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.79 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.21 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 85.2 REMARK 3 NUMBER OF REFLECTIONS : 38708 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.165 REMARK 3 R VALUE (WORKING SET) : 0.163 REMARK 3 FREE R VALUE : 0.206 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.170 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.2140 - 4.3194 0.77 2540 139 0.1809 0.1865 REMARK 3 2 4.3194 - 3.4288 0.81 2540 138 0.1458 0.1963 REMARK 3 3 3.4288 - 2.9955 0.83 2571 140 0.1563 0.2157 REMARK 3 4 2.9955 - 2.7217 0.84 2611 142 0.1628 0.2122 REMARK 3 5 2.7217 - 2.5266 0.86 2624 143 0.1533 0.1993 REMARK 3 6 2.5266 - 2.3777 0.87 2689 147 0.1502 0.1809 REMARK 3 7 2.3777 - 2.2586 0.88 2667 145 0.1584 0.2033 REMARK 3 8 2.2586 - 2.1603 0.88 2684 146 0.1610 0.2003 REMARK 3 9 2.1603 - 2.0771 0.89 2713 148 0.1636 0.2058 REMARK 3 10 2.0771 - 2.0054 0.89 2703 147 0.1719 0.2397 REMARK 3 11 2.0054 - 1.9427 0.90 2717 149 0.1757 0.2158 REMARK 3 12 1.9427 - 1.8872 0.89 2724 147 0.1784 0.2490 REMARK 3 13 1.8872 - 1.8375 0.85 2575 141 0.1816 0.2578 REMARK 3 14 1.8375 - 1.7930 0.78 2350 128 0.1848 0.2212 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.060 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.55 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 4158 REMARK 3 ANGLE : 0.895 5630 REMARK 3 CHIRALITY : 0.054 588 REMARK 3 PLANARITY : 0.006 714 REMARK 3 DIHEDRAL : 16.364 2442 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -7.4524 13.8059 -28.5187 REMARK 3 T TENSOR REMARK 3 T11: 0.0797 T22: 0.0721 REMARK 3 T33: 0.1631 T12: 0.0001 REMARK 3 T13: 0.0198 T23: 0.0103 REMARK 3 L TENSOR REMARK 3 L11: 0.4728 L22: 0.5306 REMARK 3 L33: 2.0757 L12: 0.2404 REMARK 3 L13: 0.5312 L23: 0.2813 REMARK 3 S TENSOR REMARK 3 S11: 0.0257 S12: -0.0265 S13: 0.0182 REMARK 3 S21: 0.0854 S22: -0.0466 S23: 0.0222 REMARK 3 S31: 0.0009 S32: -0.0174 S33: 0.0231 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6PTZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-JUL-19. REMARK 100 THE DEPOSITION ID IS D_1000242764. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-SEP-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38744 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.793 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 85.3 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 32.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.79 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.38900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 4K0R REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.26 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTALS WERE OBTAINED AT 21C IN DARK REMARK 280 FROM A 1:1 MIXTURE OF PROTEIN (10-12 MG/ML) AND A RESERVOIR REMARK 280 SOLUTION CONSISTING OF 7.5% PEG 6000 AND 0.1 M HEPES PH 7.1. REMARK 280 CRYSTAL REACHED MAXIMUM SIZE AFTER 4-5 DAYS AND WERE HARVESTED REMARK 280 AT THAT TIME IN THE DARK. CRYSTALS WERE TRANSFERRED TO REMARK 280 CRYOPROTECTANT SOLUTION CONSISTING OF 5% PEG 6000, 0.1 M HEPES REMARK 280 PH 7, 2 MM DTT AND EITHER 30% P400 OR 30% GLYCEROL. CRYSTALS REMARK 280 WERE FLASH-FROZEN IN LIQUID NITROGEN IN THE DARK, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 294.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 26.86650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.64150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.78700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.64150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.86650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 42.78700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -4 REMARK 465 ALA A -3 REMARK 465 MET A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 GLY A 227 REMARK 465 TRP A 228 REMARK 465 VAL A 229 REMARK 465 ALA A 230 REMARK 465 ASN A 231 REMARK 465 PHE A 232 REMARK 465 THR A 233 REMARK 465 LYS A 234 REMARK 465 PRO A 235 REMARK 465 ARG A 236 REMARK 465 THR A 237 REMARK 465 ILE A 238 REMARK 465 PRO A 239 REMARK 465 ASN A 240 REMARK 465 SER A 241 REMARK 465 LEU A 242 REMARK 465 LEU A 243 REMARK 465 PRO A 244 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 629 O HOH A 630 2.00 REMARK 500 O HOH A 803 O HOH A 895 2.06 REMARK 500 O HOH A 876 O HOH A 937 2.10 REMARK 500 O HOH A 922 O HOH A 946 2.10 REMARK 500 O HOH A 981 O HOH A 987 2.10 REMARK 500 O HOH A 634 O HOH A 748 2.12 REMARK 500 O HOH A 638 O HOH A 963 2.13 REMARK 500 OE2 GLU A 82 O HOH A 601 2.14 REMARK 500 O HOH A 879 O HOH A 931 2.14 REMARK 500 O HOH A 797 O HOH A 944 2.14 REMARK 500 OE2 GLU A 452 O HOH A 602 2.16 REMARK 500 O HOH A 751 O HOH A 931 2.18 REMARK 500 O HOH A 983 O HOH A 1003 2.18 REMARK 500 OE2 GLU A 26 O HOH A 603 2.19 REMARK 500 O HOH A 724 O HOH A 830 2.19 REMARK 500 O HOH A 777 O HOH A 992 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 878 O HOH A 907 3544 2.03 REMARK 500 OE2 GLU A 188 O HOH A 923 4455 2.07 REMARK 500 O HOH A 637 O HOH A 924 3544 2.17 REMARK 500 O HOH A 641 O HOH A 976 2454 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 10 -70.82 -122.58 REMARK 500 LYS A 11 -149.43 -93.52 REMARK 500 ASP A 17 60.90 32.48 REMARK 500 ALA A 72 -152.66 -122.51 REMARK 500 THR A 364 -103.81 -106.35 REMARK 500 ASP A 367 -58.97 -130.01 REMARK 500 PHE A 403 -44.77 76.50 REMARK 500 ARG A 462 -59.71 -122.14 REMARK 500 GLN A 489 55.59 -103.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1004 DISTANCE = 6.36 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 502 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 FAD A 501 O1A REMARK 620 2 HOH A 851 O 92.2 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FAD A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 508 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 509 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 510 DBREF1 6PTZ A 1 497 UNP A0A2I0LZR8_COLLI DBREF2 6PTZ A A0A2I0LZR8 1 497 SEQADV 6PTZ GLY A -4 UNP A0A2I0LZR EXPRESSION TAG SEQADV 6PTZ ALA A -3 UNP A0A2I0LZR EXPRESSION TAG SEQADV 6PTZ MET A -2 UNP A0A2I0LZR EXPRESSION TAG SEQADV 6PTZ GLY A -1 UNP A0A2I0LZR EXPRESSION TAG SEQADV 6PTZ SER A 0 UNP A0A2I0LZR EXPRESSION TAG SEQADV 6PTZ ASP A 319 UNP A0A2I0LZR TYR 319 ENGINEERED MUTATION SEQRES 1 A 502 GLY ALA MET GLY SER MET PRO HIS ARG THR ILE HIS LEU SEQRES 2 A 502 PHE ARG LYS GLY LEU ARG LEU HIS ASP ASN PRO THR LEU SEQRES 3 A 502 LEU ALA ALA LEU GLU SER SER GLU THR ILE TYR PRO VAL SEQRES 4 A 502 TYR VAL LEU ASP ARG ARG PHE LEU ALA SER ALA MET HIS SEQRES 5 A 502 ILE GLY ALA LEU ARG TRP HIS PHE LEU LEU GLN SER LEU SEQRES 6 A 502 GLU ASP LEU HIS LYS ASN LEU SER ARG LEU GLY ALA ARG SEQRES 7 A 502 LEU LEU VAL ILE GLN GLY GLU TYR GLU SER VAL LEU ARG SEQRES 8 A 502 ASP HIS VAL GLN LYS TRP ASN ILE THR GLN VAL THR LEU SEQRES 9 A 502 ASP ALA GLU MET GLU PRO PHE TYR LYS GLU MET GLU ALA SEQRES 10 A 502 ASN ILE ARG ARG LEU GLY ALA GLU LEU GLY PHE GLU VAL SEQRES 11 A 502 LEU SER ARG VAL GLY HIS SER LEU TYR ASP THR LYS ARG SEQRES 12 A 502 ILE LEU ASP LEU ASN GLY GLY SER PRO PRO LEU THR TYR SEQRES 13 A 502 LYS ARG PHE LEU HIS ILE LEU SER GLN LEU GLY ASP PRO SEQRES 14 A 502 GLU VAL PRO VAL ARG ASN LEU THR ALA GLU ASP PHE GLN SEQRES 15 A 502 ARG CYS MET SER PRO GLU PRO GLY LEU ALA GLU ARG TYR SEQRES 16 A 502 ARG VAL PRO VAL PRO ALA ASP LEU GLU ILE PRO PRO GLN SEQRES 17 A 502 SER LEU SER PRO TRP THR GLY GLY GLU THR GLU GLY LEU SEQRES 18 A 502 ARG ARG LEU GLU GLN HIS LEU THR ASP GLN GLY TRP VAL SEQRES 19 A 502 ALA ASN PHE THR LYS PRO ARG THR ILE PRO ASN SER LEU SEQRES 20 A 502 LEU PRO SER THR THR GLY LEU SER PRO TYR PHE SER MET SEQRES 21 A 502 GLY CYS LEU SER VAL ARG THR PHE PHE GLN ARG LEU SER SEQRES 22 A 502 ASN ILE TYR ALA GLN ALA LYS HIS HIS SER LEU PRO PRO SEQRES 23 A 502 VAL SER LEU GLN GLY GLN LEU LEU TRP ARG GLU PHE PHE SEQRES 24 A 502 TYR THR VAL ALA SER ALA THR GLN ASN PHE THR GLN MET SEQRES 25 A 502 ALA GLY ASN PRO ILE CYS LEU GLN ILE HIS TRP ASP GLU SEQRES 26 A 502 ASP ALA GLU ARG LEU HIS LYS TRP LYS THR ALA GLN THR SEQRES 27 A 502 GLY PHE PRO TRP ILE ASP ALA ILE MET THR GLN LEU ARG SEQRES 28 A 502 GLN GLU GLY TRP ILE HIS HIS LEU ALA ARG HIS ALA VAL SEQRES 29 A 502 ALA CYS PHE LEU THR ARG GLY ASP LEU TRP ILE SER TRP SEQRES 30 A 502 GLU GLU GLY MET LYS VAL PHE GLU GLU LEU LEU LEU ASP SEQRES 31 A 502 ALA ASP TYR SER ILE ASN ALA GLY ASN TRP MET TRP LEU SEQRES 32 A 502 SER ALA SER ALA PHE PHE HIS HIS TYR THR ARG ILE PHE SEQRES 33 A 502 CYS PRO VAL ARG PHE GLY LYS ARG THR ASP PRO GLU GLY SEQRES 34 A 502 GLN TYR ILE ARG LYS TYR LEU PRO VAL LEU LYS ASN PHE SEQRES 35 A 502 PRO THR LYS TYR ILE TYR GLU PRO TRP THR ALA SER GLU SEQRES 36 A 502 GLU GLU GLN ARG GLN ALA GLY CYS ILE ILE GLY ARG ASP SEQRES 37 A 502 TYR PRO PHE PRO MET VAL ASN HIS LYS GLU ALA SER ASP SEQRES 38 A 502 ARG ASN LEU GLN LEU MET ARG ARG VAL ARG GLU GLU GLN SEQRES 39 A 502 ARG GLY THR ALA GLN LEU THR ARG HET FAD A 501 53 HET MG A 502 1 HET PEG A 503 7 HET PEG A 504 7 HET PEG A 505 7 HET PEG A 506 7 HET PEG A 507 7 HET PEG A 508 7 HET PEG A 509 7 HET GOL A 510 6 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM MG MAGNESIUM ION HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 FAD C27 H33 N9 O15 P2 FORMUL 3 MG MG 2+ FORMUL 4 PEG 7(C4 H10 O3) FORMUL 11 GOL C3 H8 O3 FORMUL 12 HOH *404(H2 O) HELIX 1 AA1 ASN A 18 SER A 27 1 10 HELIX 2 AA2 ASP A 38 MET A 46 1 9 HELIX 3 AA3 GLY A 49 LEU A 70 1 22 HELIX 4 AA4 GLU A 80 ASN A 93 1 14 HELIX 5 AA5 GLU A 104 GLY A 122 1 19 HELIX 6 AA6 ASP A 135 ASN A 143 1 9 HELIX 7 AA7 THR A 150 GLY A 162 1 13 HELIX 8 AA8 GLU A 174 CYS A 179 1 6 HELIX 9 AA9 LEU A 186 ARG A 191 5 6 HELIX 10 AB1 VAL A 194 GLU A 199 5 6 HELIX 11 AB2 GLY A 211 GLN A 226 1 16 HELIX 12 AB3 LEU A 249 MET A 255 1 7 HELIX 13 AB4 SER A 259 ALA A 274 1 16 HELIX 14 AB5 LEU A 279 ALA A 300 1 22 HELIX 15 AB6 ASP A 321 THR A 330 1 10 HELIX 16 AB7 PHE A 335 GLY A 349 1 15 HELIX 17 AB8 HIS A 352 THR A 364 1 13 HELIX 18 AB9 SER A 371 LEU A 383 1 13 HELIX 19 AC1 ASP A 387 SER A 399 1 13 HELIX 20 AC2 VAL A 414 ASP A 421 1 8 HELIX 21 AC3 GLY A 424 LEU A 431 1 8 HELIX 22 AC4 PRO A 432 LYS A 435 5 4 HELIX 23 AC5 PRO A 438 ILE A 442 5 5 HELIX 24 AC6 GLU A 444 ALA A 448 5 5 HELIX 25 AC7 SER A 449 GLY A 457 1 9 HELIX 26 AC8 ASN A 470 GLN A 489 1 20 HELIX 27 AC9 GLN A 489 THR A 496 1 8 SHEET 1 AA1 5 LEU A 75 GLN A 78 0 SHEET 2 AA1 5 SER A 28 LEU A 37 1 N PRO A 33 O LEU A 75 SHEET 3 AA1 5 HIS A 3 PHE A 9 1 N HIS A 7 O VAL A 34 SHEET 4 AA1 5 GLN A 96 LEU A 99 1 O THR A 98 N LEU A 8 SHEET 5 AA1 5 GLU A 124 LEU A 126 1 O GLU A 124 N VAL A 97 LINK O1A FAD A 501 MG MG A 502 1555 1555 2.56 LINK MG MG A 502 O HOH A 851 1555 1555 1.96 SITE 1 AC1 31 THR A 246 THR A 247 GLY A 248 LEU A 249 SITE 2 AC1 31 SER A 250 PHE A 253 SER A 254 GLN A 287 SITE 3 AC1 31 ARG A 291 PHE A 294 TRP A 350 HIS A 353 SITE 4 AC1 31 ARG A 356 HIS A 357 PHE A 379 LEU A 383 SITE 5 AC1 31 ASP A 385 ALA A 386 ASP A 387 ILE A 390 SITE 6 AC1 31 ASN A 391 ASN A 394 TRP A 395 LEU A 398 SITE 7 AC1 31 MG A 502 GOL A 510 HOH A 645 HOH A 710 SITE 8 AC1 31 HOH A 774 HOH A 806 HOH A 851 SITE 1 AC2 5 THR A 246 FAD A 501 HOH A 851 HOH A 935 SITE 2 AC2 5 HOH A 978 SITE 1 AC3 3 GLN A 273 PEG A 507 HOH A 858 SITE 1 AC4 5 TRP A 337 THR A 420 TYR A 426 HOH A 800 SITE 2 AC4 5 HOH A 805 SITE 1 AC5 4 ARG A 52 MET A 255 LEU A 384 HOH A 681 SITE 1 AC6 2 LYS A 91 ASN A 93 SITE 1 AC7 6 GLY A 309 ASN A 310 GLN A 315 MET A 468 SITE 2 AC7 6 PEG A 503 HOH A 635 SITE 1 AC8 7 ALA A 119 GLU A 120 GLY A 122 ILE A 410 SITE 2 AC8 7 PHE A 411 HOH A 880 HOH A 961 SITE 1 AC9 7 ARG A 40 LEU A 158 GLY A 162 PHE A 264 SITE 2 AC9 7 GLN A 285 LEU A 289 HOH A 637 SITE 1 AD1 8 ARG A 86 GLU A 120 HIS A 353 HIS A 357 SITE 2 AD1 8 ASN A 394 TRP A 397 FAD A 501 HOH A 907 CRYST1 53.733 85.574 103.283 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018611 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011686 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009682 0.00000