HEADER HYDROLASE 09-DEC-18 6Q5T TITLE CRYSTAL STRUCTURE OF MYCOLICIBACTERIUM HASSIACUM GLUCOSYLGLYCERATE TITLE 2 HYDROLASE (MHGGH) - APO FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYDROLASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM HASSIACUM (STRAIN DSM 44199 / CIP SOURCE 3 105218 / JCM 12690 / 3849); SOURCE 4 ORGANISM_TAXID: 1122247; SOURCE 5 GENE: C731_0006; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MYCOBACTERIUM, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR T.B.CEREIJA,S.MACEDO-RIBEIRO,P.J.B.PEREIRA REVDAT 4 24-JAN-24 6Q5T 1 REMARK REVDAT 3 31-JUL-19 6Q5T 1 JRNL REVDAT 2 22-MAY-19 6Q5T 1 REMARK REVDAT 1 15-MAY-19 6Q5T 0 JRNL AUTH T.B.CEREIJA,S.ALARICO,E.C.LOURENCO,J.A.MANSO,M.R.VENTURA, JRNL AUTH 2 N.EMPADINHAS,S.MACEDO-RIBEIRO,P.J.B.PEREIRA JRNL TITL THE STRUCTURAL CHARACTERIZATION OF A GLUCOSYLGLYCERATE JRNL TITL 2 HYDROLASE PROVIDES INSIGHTS INTO THE MOLECULAR MECHANISM OF JRNL TITL 3 MYCOBACTERIAL RECOVERY FROM NITROGEN STARVATION. JRNL REF IUCRJ V. 6 572 2019 JRNL REFN ESSN 2052-2525 JRNL PMID 31316802 JRNL DOI 10.1107/S2052252519005372 REMARK 2 REMARK 2 RESOLUTION. 2.54 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.14_3260: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.54 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.86 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 66183 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 3359 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.8714 - 7.3193 0.98 2881 132 0.1871 0.1831 REMARK 3 2 7.3193 - 5.8124 0.99 2704 154 0.1708 0.2103 REMARK 3 3 5.8124 - 5.0785 1.00 2687 147 0.1453 0.1629 REMARK 3 4 5.0785 - 4.6145 1.00 2669 137 0.1143 0.1467 REMARK 3 5 4.6145 - 4.2840 1.00 2658 116 0.1042 0.1335 REMARK 3 6 4.2840 - 4.0315 1.00 2657 139 0.1068 0.1489 REMARK 3 7 4.0315 - 3.8297 1.00 2604 161 0.1169 0.1565 REMARK 3 8 3.8297 - 3.6630 1.00 2629 141 0.1284 0.1698 REMARK 3 9 3.6630 - 3.5221 1.00 2597 140 0.1419 0.1918 REMARK 3 10 3.5221 - 3.4005 1.00 2581 163 0.1648 0.2148 REMARK 3 11 3.4005 - 3.2942 1.00 2605 139 0.1686 0.2146 REMARK 3 12 3.2942 - 3.2001 1.00 2576 161 0.1799 0.2122 REMARK 3 13 3.2001 - 3.1159 1.00 2601 136 0.2036 0.2400 REMARK 3 14 3.1159 - 3.0398 1.00 2572 139 0.2312 0.2931 REMARK 3 15 3.0398 - 2.9708 1.00 2631 125 0.2280 0.2867 REMARK 3 16 2.9708 - 2.9075 1.00 2574 142 0.2318 0.3074 REMARK 3 17 2.9075 - 2.8494 1.00 2579 150 0.2307 0.2582 REMARK 3 18 2.8494 - 2.7956 1.00 2588 120 0.2286 0.2919 REMARK 3 19 2.7956 - 2.7457 1.00 2609 120 0.2224 0.3082 REMARK 3 20 2.7457 - 2.6992 1.00 2549 142 0.2456 0.2783 REMARK 3 21 2.6992 - 2.6556 0.99 2587 126 0.2635 0.3102 REMARK 3 22 2.6556 - 2.6148 1.00 2558 142 0.2751 0.3398 REMARK 3 23 2.6148 - 2.5763 1.00 2577 146 0.2786 0.3619 REMARK 3 24 2.5763 - 2.5400 1.00 2551 141 0.2974 0.3316 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.770 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 7480 REMARK 3 ANGLE : 1.058 10202 REMARK 3 CHIRALITY : 0.059 1050 REMARK 3 PLANARITY : 0.007 1342 REMARK 3 DIHEDRAL : 22.265 4403 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 5 THROUGH 40 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.8152 78.0327 33.3540 REMARK 3 T TENSOR REMARK 3 T11: 0.4124 T22: 0.6173 REMARK 3 T33: 0.4293 T12: 0.0866 REMARK 3 T13: -0.0591 T23: 0.0876 REMARK 3 L TENSOR REMARK 3 L11: 7.8866 L22: 3.2183 REMARK 3 L33: 6.5879 L12: -3.5695 REMARK 3 L13: -6.1615 L23: 4.1206 REMARK 3 S TENSOR REMARK 3 S11: 0.0331 S12: 0.2614 S13: -0.2952 REMARK 3 S21: 0.0682 S22: -0.3501 S23: 0.4188 REMARK 3 S31: -0.1295 S32: -0.9147 S33: 0.3184 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 41 THROUGH 118 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.8857 87.8496 50.9005 REMARK 3 T TENSOR REMARK 3 T11: 0.4557 T22: 0.4798 REMARK 3 T33: 0.4120 T12: 0.1199 REMARK 3 T13: 0.0455 T23: 0.1033 REMARK 3 L TENSOR REMARK 3 L11: 8.4184 L22: 1.2453 REMARK 3 L33: 3.5283 L12: -0.9216 REMARK 3 L13: -4.2253 L23: 0.2432 REMARK 3 S TENSOR REMARK 3 S11: 0.1018 S12: 0.5217 S13: 0.2736 REMARK 3 S21: -0.1112 S22: 0.0714 S23: 0.1141 REMARK 3 S31: -0.4330 S32: -0.4373 S33: -0.1595 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 119 THROUGH 162 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.9648 90.0004 52.5766 REMARK 3 T TENSOR REMARK 3 T11: 0.3664 T22: 0.3620 REMARK 3 T33: 0.4669 T12: 0.0094 REMARK 3 T13: -0.0407 T23: 0.0598 REMARK 3 L TENSOR REMARK 3 L11: 8.1144 L22: 6.4753 REMARK 3 L33: 7.9977 L12: 1.2420 REMARK 3 L13: -6.2397 L23: -1.5847 REMARK 3 S TENSOR REMARK 3 S11: 0.3809 S12: -0.0401 S13: 0.5362 REMARK 3 S21: 0.1737 S22: -0.1337 S23: -0.3180 REMARK 3 S31: -0.7784 S32: 0.4649 S33: -0.2372 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 163 THROUGH 193 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.3415 72.5212 63.1788 REMARK 3 T TENSOR REMARK 3 T11: 0.4285 T22: 0.4303 REMARK 3 T33: 0.3437 T12: 0.0798 REMARK 3 T13: 0.1576 T23: 0.0816 REMARK 3 L TENSOR REMARK 3 L11: 7.7729 L22: 4.3764 REMARK 3 L33: 3.7934 L12: 2.4597 REMARK 3 L13: 1.0565 L23: 0.2913 REMARK 3 S TENSOR REMARK 3 S11: 0.0211 S12: -0.2075 S13: -0.1412 REMARK 3 S21: 0.4542 S22: 0.0349 S23: 0.1855 REMARK 3 S31: 0.2368 S32: -0.0778 S33: -0.0153 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 194 THROUGH 221 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.9290 75.0545 53.1884 REMARK 3 T TENSOR REMARK 3 T11: 0.6115 T22: 0.9138 REMARK 3 T33: 0.7767 T12: 0.0685 REMARK 3 T13: 0.0288 T23: 0.0208 REMARK 3 L TENSOR REMARK 3 L11: 7.9703 L22: 2.3564 REMARK 3 L33: 8.5124 L12: 3.8902 REMARK 3 L13: -7.2808 L23: -2.6829 REMARK 3 S TENSOR REMARK 3 S11: 0.2001 S12: 1.2005 S13: 0.7482 REMARK 3 S21: -0.1528 S22: -0.0020 S23: 0.8446 REMARK 3 S31: -0.5656 S32: -0.9106 S33: -0.0496 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 222 THROUGH 320 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.7360 76.3788 64.7587 REMARK 3 T TENSOR REMARK 3 T11: 0.4611 T22: 0.4994 REMARK 3 T33: 0.2932 T12: 0.0790 REMARK 3 T13: 0.0523 T23: 0.0414 REMARK 3 L TENSOR REMARK 3 L11: 3.8122 L22: 1.7973 REMARK 3 L33: 2.0117 L12: 0.1017 REMARK 3 L13: -0.7799 L23: -0.2363 REMARK 3 S TENSOR REMARK 3 S11: -0.0716 S12: -0.3798 S13: -0.0938 REMARK 3 S21: 0.1674 S22: 0.0275 S23: -0.0453 REMARK 3 S31: 0.1595 S32: 0.0797 S33: 0.0439 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 321 THROUGH 446 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.7385 64.0245 48.1316 REMARK 3 T TENSOR REMARK 3 T11: 0.3935 T22: 0.3515 REMARK 3 T33: 0.3473 T12: 0.1069 REMARK 3 T13: 0.0940 T23: 0.0452 REMARK 3 L TENSOR REMARK 3 L11: 4.3385 L22: 2.3202 REMARK 3 L33: 4.2631 L12: 0.6966 REMARK 3 L13: 1.0722 L23: 0.2518 REMARK 3 S TENSOR REMARK 3 S11: -0.1113 S12: -0.0571 S13: -0.2839 REMARK 3 S21: -0.0522 S22: -0.0037 S23: -0.0486 REMARK 3 S31: 0.5846 S32: 0.1231 S33: 0.1121 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 0 THROUGH 69 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.0273 85.6325 23.2788 REMARK 3 T TENSOR REMARK 3 T11: 0.3241 T22: 0.4795 REMARK 3 T33: 0.3701 T12: 0.1010 REMARK 3 T13: 0.0367 T23: 0.0821 REMARK 3 L TENSOR REMARK 3 L11: 4.1642 L22: 2.9234 REMARK 3 L33: 5.0425 L12: -1.7409 REMARK 3 L13: 2.2608 L23: -0.7989 REMARK 3 S TENSOR REMARK 3 S11: -0.2491 S12: -0.4309 S13: 0.2138 REMARK 3 S21: 0.0277 S22: 0.0105 S23: -0.2244 REMARK 3 S31: -0.3197 S32: -0.0546 S33: 0.2150 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 70 THROUGH 162 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.5447 83.5203 7.0930 REMARK 3 T TENSOR REMARK 3 T11: 0.3416 T22: 0.3565 REMARK 3 T33: 0.3449 T12: 0.0073 REMARK 3 T13: -0.0340 T23: 0.0491 REMARK 3 L TENSOR REMARK 3 L11: 3.1680 L22: 5.0331 REMARK 3 L33: 2.9196 L12: -1.0993 REMARK 3 L13: 0.3763 L23: -0.7591 REMARK 3 S TENSOR REMARK 3 S11: -0.0197 S12: -0.0119 S13: -0.2350 REMARK 3 S21: -0.1436 S22: 0.0470 S23: 0.2681 REMARK 3 S31: 0.2605 S32: -0.1297 S33: -0.0452 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 163 THROUGH 221 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.5584 102.8943 2.1647 REMARK 3 T TENSOR REMARK 3 T11: 0.4712 T22: 0.4189 REMARK 3 T33: 0.5247 T12: 0.0481 REMARK 3 T13: -0.0788 T23: 0.0882 REMARK 3 L TENSOR REMARK 3 L11: 2.4309 L22: 4.2239 REMARK 3 L33: 3.8810 L12: 0.7643 REMARK 3 L13: 0.6396 L23: -1.0662 REMARK 3 S TENSOR REMARK 3 S11: -0.0660 S12: 0.1121 S13: 0.5373 REMARK 3 S21: 0.0563 S22: -0.0172 S23: 0.4617 REMARK 3 S31: -0.3679 S32: -0.1978 S33: 0.0715 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 222 THROUGH 320 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.5364 89.5806 -4.2309 REMARK 3 T TENSOR REMARK 3 T11: 0.5621 T22: 0.4786 REMARK 3 T33: 0.3084 T12: 0.0847 REMARK 3 T13: -0.0092 T23: 0.0421 REMARK 3 L TENSOR REMARK 3 L11: 1.8637 L22: 2.4124 REMARK 3 L33: 1.5795 L12: -0.2548 REMARK 3 L13: -0.0191 L23: -0.6024 REMARK 3 S TENSOR REMARK 3 S11: 0.0161 S12: 0.2049 S13: -0.0064 REMARK 3 S21: -0.4304 S22: -0.1242 S23: -0.0935 REMARK 3 S31: 0.1179 S32: 0.2265 S33: 0.1092 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 321 THROUGH 446 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.5366 90.3481 12.4672 REMARK 3 T TENSOR REMARK 3 T11: 0.3364 T22: 0.4999 REMARK 3 T33: 0.3829 T12: 0.0794 REMARK 3 T13: -0.0066 T23: 0.1053 REMARK 3 L TENSOR REMARK 3 L11: 2.0627 L22: 2.4815 REMARK 3 L33: 2.7300 L12: 0.1877 REMARK 3 L13: -0.2280 L23: 0.2270 REMARK 3 S TENSOR REMARK 3 S11: 0.0025 S12: -0.1069 S13: -0.1264 REMARK 3 S21: -0.0793 S22: -0.1516 S23: -0.2862 REMARK 3 S31: 0.0979 S32: 0.5547 S33: 0.1445 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6Q5T COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-DEC-18. REMARK 100 THE DEPOSITION ID IS D_1200013071. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-NOV-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.96863 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 66272 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.540 REMARK 200 RESOLUTION RANGE LOW (A) : 49.860 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : 0.10900 REMARK 200 R SYM (I) : 0.10900 REMARK 200 FOR THE DATA SET : 11.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.54 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.63 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 7.30 REMARK 200 R MERGE FOR SHELL (I) : 1.16500 REMARK 200 R SYM FOR SHELL (I) : 1.16500 REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5OHZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 74.48 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.82 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: ADA PH 6.5, AMMONIUM SULFATE, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+2/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 162.17733 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 81.08867 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 162.17733 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 81.08867 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 162.17733 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 81.08867 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 162.17733 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 81.08867 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8400 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 64120 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -32.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 83.50400 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 144.63317 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 557 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 702 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 ALA A 0 REMARK 465 MET A 1 REMARK 465 PRO A 2 REMARK 465 HIS A 3 REMARK 465 ASP A 4 REMARK 465 GLY A 26 REMARK 465 THR A 27 REMARK 465 MET A 28 REMARK 465 THR A 29 REMARK 465 THR A 30 REMARK 465 GLY B -1 REMARK 465 GLY B 26 REMARK 465 THR B 27 REMARK 465 MET B 28 REMARK 465 THR B 29 REMARK 465 THR B 30 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 24 -105.21 52.08 REMARK 500 ASN A 83 172.09 177.49 REMARK 500 THR A 114 -167.04 -113.57 REMARK 500 ARG A 135 -53.26 -130.00 REMARK 500 MET A 181 55.14 -147.73 REMARK 500 ASN A 207 34.38 -162.99 REMARK 500 GLU A 221 66.58 -67.20 REMARK 500 GLU A 319 66.19 -110.08 REMARK 500 PHE A 349 -110.21 -132.28 REMARK 500 TYR A 375 -106.25 32.78 REMARK 500 ARG B 21 37.39 -98.72 REMARK 500 ASP B 24 -79.12 63.88 REMARK 500 SER B 55 105.70 -163.61 REMARK 500 THR B 114 -167.14 -119.69 REMARK 500 ASP B 164 55.76 -141.38 REMARK 500 MET B 181 52.84 -141.54 REMARK 500 GLU B 221 67.48 -65.76 REMARK 500 GLU B 319 65.64 -110.67 REMARK 500 PHE B 349 -102.68 -132.52 REMARK 500 TYR B 375 -106.91 32.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5OIV RELATED DB: PDB REMARK 900 RELATED ID: 5OHC RELATED DB: PDB REMARK 900 RELATED ID: 5OHZ RELATED DB: PDB REMARK 900 RELATED ID: 5OIW RELATED DB: PDB REMARK 900 RELATED ID: 5OJV RELATED DB: PDB REMARK 900 RELATED ID: 5OJU RELATED DB: PDB REMARK 900 RELATED ID: 5OIE RELATED DB: PDB REMARK 900 RELATED ID: 5OI1 RELATED DB: PDB REMARK 900 RELATED ID: 5OJ4 RELATED DB: PDB REMARK 900 RELATED ID: 5OI0 RELATED DB: PDB REMARK 900 RELATED ID: 5ONZ RELATED DB: PDB REMARK 900 RELATED ID: 5ONT RELATED DB: PDB REMARK 900 RELATED ID: 5OO2 RELATED DB: PDB REMARK 900 RELATED ID: 6G3N RELATED DB: PDB DBREF 6Q5T A 1 446 UNP K5BDL0 K5BDL0_MYCHD 1 446 DBREF 6Q5T B 1 446 UNP K5BDL0 K5BDL0_MYCHD 1 446 SEQADV 6Q5T GLY A -1 UNP K5BDL0 EXPRESSION TAG SEQADV 6Q5T ALA A 0 UNP K5BDL0 EXPRESSION TAG SEQADV 6Q5T GLY B -1 UNP K5BDL0 EXPRESSION TAG SEQADV 6Q5T ALA B 0 UNP K5BDL0 EXPRESSION TAG SEQRES 1 A 448 GLY ALA MET PRO HIS ASP PRO SER PHE THR PRO THR GLN SEQRES 2 A 448 LEU ALA ALA ARG ALA ALA TYR LEU LEU ARG GLY ASN ASP SEQRES 3 A 448 LEU GLY THR MET THR THR ALA ALA PRO LEU LEU TYR PRO SEQRES 4 A 448 HIS MET TRP SER TRP ASP ALA ALA PHE VAL ALA ILE GLY SEQRES 5 A 448 LEU ALA PRO LEU SER VAL GLU ARG ALA VAL VAL GLU LEU SEQRES 6 A 448 ASP THR LEU LEU SER ALA GLN TRP ARG ASN GLY MET ILE SEQRES 7 A 448 PRO HIS ILE VAL PHE ALA ASN GLY VAL ASP GLY TYR PHE SEQRES 8 A 448 PRO GLY PRO ALA ARG TRP ALA THR ALA THR LEU ALA ASP SEQRES 9 A 448 ASN ALA PRO ARG ASN ARG LEU THR SER GLY ILE THR GLN SEQRES 10 A 448 PRO PRO VAL HIS ALA ILE ALA VAL GLN ARG ILE LEU GLU SEQRES 11 A 448 HIS ALA ARG THR ARG GLY ARG SER THR ARG ALA VAL ALA SEQRES 12 A 448 GLU ALA PHE LEU ASP ARG ARG TRP GLY ASP LEU MET ARG SEQRES 13 A 448 TRP HIS ARG TRP LEU ALA GLU CYS ARG ASP ARG ASN GLU SEQRES 14 A 448 ARG GLY ARG ILE THR LEU TYR HIS GLY TRP GLU SER GLY SEQRES 15 A 448 MET ASP ASN SER PRO ARG TRP ASP SER ALA TYR ALA ASN SEQRES 16 A 448 VAL VAL PRO GLY LYS LEU PRO GLU TYR GLN ARG ALA ASP SEQRES 17 A 448 ASN VAL ILE ILE THR ASP PRO SER GLN ARG PRO SER ASP SEQRES 18 A 448 GLY GLU TYR ASP ARG TYR LEU TRP LEU LEU GLU GLU MET SEQRES 19 A 448 LYS ALA VAL ARG TYR ASP ASP GLU ARG LEU PRO SER VAL SEQRES 20 A 448 MET SER PHE GLN VAL GLU ASP VAL PHE PHE SER ALA ILE SEQRES 21 A 448 PHE SER VAL ALA CYS GLN VAL LEU ALA GLU ILE GLY GLU SEQRES 22 A 448 ASP TYR LYS ARG PRO HIS ALA ASP VAL LYS ASP LEU TYR SEQRES 23 A 448 LEU TRP ALA GLU ARG PHE ARG ALA GLY VAL VAL GLU THR SEQRES 24 A 448 THR ASP GLN ARG THR GLY ALA ALA ARG ASP PHE ASP VAL SEQRES 25 A 448 LEU ALA GLU LYS TRP LEU VAL THR GLU THR ALA ALA GLN SEQRES 26 A 448 PHE ALA PRO LEU LEU CYS GLY GLY LEU PRO HIS ASP ARG SEQRES 27 A 448 GLU ARG ALA LEU LEU LYS LEU LEU GLU GLY PRO ARG PHE SEQRES 28 A 448 CYS GLY HIS PRO ASP LEU LYS TYR GLY LEU ILE PRO SER SEQRES 29 A 448 THR SER PRO VAL SER ARG ASP PHE ARG PRO ARG GLU TYR SEQRES 30 A 448 TRP ARG GLY PRO VAL TRP PRO VAL LEU THR TRP LEU PHE SEQRES 31 A 448 SER TRP CYS PHE ALA ARG ARG GLY TRP ALA GLU ARG ALA SEQRES 32 A 448 ARG LEU LEU ARG GLN GLU GLY LEU ARG GLN ALA SER ASP SEQRES 33 A 448 GLY SER PHE ALA GLU TYR TYR GLU PRO PHE THR GLY GLU SEQRES 34 A 448 PRO LEU GLY SER MET GLN GLN SER TRP THR ALA ALA ALA SEQRES 35 A 448 VAL LEU ASP TRP LEU GLY SEQRES 1 B 448 GLY ALA MET PRO HIS ASP PRO SER PHE THR PRO THR GLN SEQRES 2 B 448 LEU ALA ALA ARG ALA ALA TYR LEU LEU ARG GLY ASN ASP SEQRES 3 B 448 LEU GLY THR MET THR THR ALA ALA PRO LEU LEU TYR PRO SEQRES 4 B 448 HIS MET TRP SER TRP ASP ALA ALA PHE VAL ALA ILE GLY SEQRES 5 B 448 LEU ALA PRO LEU SER VAL GLU ARG ALA VAL VAL GLU LEU SEQRES 6 B 448 ASP THR LEU LEU SER ALA GLN TRP ARG ASN GLY MET ILE SEQRES 7 B 448 PRO HIS ILE VAL PHE ALA ASN GLY VAL ASP GLY TYR PHE SEQRES 8 B 448 PRO GLY PRO ALA ARG TRP ALA THR ALA THR LEU ALA ASP SEQRES 9 B 448 ASN ALA PRO ARG ASN ARG LEU THR SER GLY ILE THR GLN SEQRES 10 B 448 PRO PRO VAL HIS ALA ILE ALA VAL GLN ARG ILE LEU GLU SEQRES 11 B 448 HIS ALA ARG THR ARG GLY ARG SER THR ARG ALA VAL ALA SEQRES 12 B 448 GLU ALA PHE LEU ASP ARG ARG TRP GLY ASP LEU MET ARG SEQRES 13 B 448 TRP HIS ARG TRP LEU ALA GLU CYS ARG ASP ARG ASN GLU SEQRES 14 B 448 ARG GLY ARG ILE THR LEU TYR HIS GLY TRP GLU SER GLY SEQRES 15 B 448 MET ASP ASN SER PRO ARG TRP ASP SER ALA TYR ALA ASN SEQRES 16 B 448 VAL VAL PRO GLY LYS LEU PRO GLU TYR GLN ARG ALA ASP SEQRES 17 B 448 ASN VAL ILE ILE THR ASP PRO SER GLN ARG PRO SER ASP SEQRES 18 B 448 GLY GLU TYR ASP ARG TYR LEU TRP LEU LEU GLU GLU MET SEQRES 19 B 448 LYS ALA VAL ARG TYR ASP ASP GLU ARG LEU PRO SER VAL SEQRES 20 B 448 MET SER PHE GLN VAL GLU ASP VAL PHE PHE SER ALA ILE SEQRES 21 B 448 PHE SER VAL ALA CYS GLN VAL LEU ALA GLU ILE GLY GLU SEQRES 22 B 448 ASP TYR LYS ARG PRO HIS ALA ASP VAL LYS ASP LEU TYR SEQRES 23 B 448 LEU TRP ALA GLU ARG PHE ARG ALA GLY VAL VAL GLU THR SEQRES 24 B 448 THR ASP GLN ARG THR GLY ALA ALA ARG ASP PHE ASP VAL SEQRES 25 B 448 LEU ALA GLU LYS TRP LEU VAL THR GLU THR ALA ALA GLN SEQRES 26 B 448 PHE ALA PRO LEU LEU CYS GLY GLY LEU PRO HIS ASP ARG SEQRES 27 B 448 GLU ARG ALA LEU LEU LYS LEU LEU GLU GLY PRO ARG PHE SEQRES 28 B 448 CYS GLY HIS PRO ASP LEU LYS TYR GLY LEU ILE PRO SER SEQRES 29 B 448 THR SER PRO VAL SER ARG ASP PHE ARG PRO ARG GLU TYR SEQRES 30 B 448 TRP ARG GLY PRO VAL TRP PRO VAL LEU THR TRP LEU PHE SEQRES 31 B 448 SER TRP CYS PHE ALA ARG ARG GLY TRP ALA GLU ARG ALA SEQRES 32 B 448 ARG LEU LEU ARG GLN GLU GLY LEU ARG GLN ALA SER ASP SEQRES 33 B 448 GLY SER PHE ALA GLU TYR TYR GLU PRO PHE THR GLY GLU SEQRES 34 B 448 PRO LEU GLY SER MET GLN GLN SER TRP THR ALA ALA ALA SEQRES 35 B 448 VAL LEU ASP TRP LEU GLY FORMUL 3 HOH *379(H2 O) HELIX 1 AA1 THR A 8 LEU A 19 1 12 HELIX 2 AA2 SER A 41 ALA A 52 1 12 HELIX 3 AA3 SER A 55 SER A 68 1 14 HELIX 4 AA4 GLY A 91 ALA A 96 1 6 HELIX 5 AA5 ALA A 96 ALA A 101 1 6 HELIX 6 AA6 VAL A 118 THR A 132 1 15 HELIX 7 AA7 ARG A 135 ARG A 163 1 29 HELIX 8 AA8 HIS A 175 SER A 179 5 5 HELIX 9 AA9 SER A 184 ARG A 186 5 3 HELIX 10 AB1 TRP A 187 ASN A 193 1 7 HELIX 11 AB2 ASP A 212 ARG A 216 5 5 HELIX 12 AB3 GLU A 221 VAL A 235 1 15 HELIX 13 AB4 ARG A 241 MET A 246 1 6 HELIX 14 AB5 VAL A 253 TYR A 273 1 21 HELIX 15 AB6 PRO A 276 THR A 297 1 22 HELIX 16 AB7 THR A 320 GLN A 323 5 4 HELIX 17 AB8 PHE A 324 GLY A 330 1 7 HELIX 18 AB9 PRO A 333 GLY A 346 1 14 HELIX 19 AC1 TRP A 381 ARG A 395 1 15 HELIX 20 AC2 TRP A 397 SER A 413 1 17 HELIX 21 AC3 SER A 435 GLY A 446 1 12 HELIX 22 AC4 THR B 8 GLY B 22 1 15 HELIX 23 AC5 SER B 41 ALA B 52 1 12 HELIX 24 AC6 SER B 55 SER B 68 1 14 HELIX 25 AC7 GLY B 91 ALA B 96 1 6 HELIX 26 AC8 ALA B 96 ALA B 101 1 6 HELIX 27 AC9 VAL B 118 ARG B 131 1 14 HELIX 28 AD1 GLY B 134 ARG B 163 1 30 HELIX 29 AD2 HIS B 175 GLY B 180 5 6 HELIX 30 AD3 SER B 184 ARG B 186 5 3 HELIX 31 AD4 TRP B 187 ALA B 192 1 6 HELIX 32 AD5 ASP B 212 ARG B 216 5 5 HELIX 33 AD6 GLU B 221 VAL B 235 1 15 HELIX 34 AD7 ARG B 241 MET B 246 1 6 HELIX 35 AD8 VAL B 253 TYR B 273 1 21 HELIX 36 AD9 PRO B 276 THR B 297 1 22 HELIX 37 AE1 THR B 320 GLN B 323 5 4 HELIX 38 AE2 PHE B 324 GLY B 330 1 7 HELIX 39 AE3 PRO B 333 GLY B 346 1 14 HELIX 40 AE4 TRP B 381 ARG B 395 1 15 HELIX 41 AE5 TRP B 397 SER B 413 1 17 HELIX 42 AE6 SER B 435 GLY B 446 1 12 SHEET 1 AA1 3 MET A 39 TRP A 40 0 SHEET 2 AA1 3 ILE A 79 PHE A 81 -1 O VAL A 80 N MET A 39 SHEET 3 AA1 3 LEU A 109 THR A 110 -1 O LEU A 109 N PHE A 81 SHEET 1 AA2 4 ILE A 171 LEU A 173 0 SHEET 2 AA2 4 VAL A 250 ASP A 252 -1 O VAL A 250 N LEU A 173 SHEET 3 AA2 4 ASP A 307 ASP A 309 -1 O PHE A 308 N GLU A 251 SHEET 4 AA2 4 LYS A 314 LEU A 316 -1 O LEU A 316 N ASP A 307 SHEET 1 AA3 2 TYR A 420 TYR A 421 0 SHEET 2 AA3 2 PRO A 428 GLY A 430 -1 O LEU A 429 N TYR A 420 SHEET 1 AA4 3 MET B 39 TRP B 40 0 SHEET 2 AA4 3 ILE B 79 PHE B 81 -1 O VAL B 80 N MET B 39 SHEET 3 AA4 3 LEU B 109 THR B 110 -1 O LEU B 109 N PHE B 81 SHEET 1 AA5 4 ILE B 171 LEU B 173 0 SHEET 2 AA5 4 VAL B 250 ASP B 252 -1 O VAL B 250 N LEU B 173 SHEET 3 AA5 4 ASP B 307 ASP B 309 -1 O PHE B 308 N GLU B 251 SHEET 4 AA5 4 LYS B 314 LEU B 316 -1 O LEU B 316 N ASP B 307 SHEET 1 AA6 2 TYR B 420 TYR B 421 0 SHEET 2 AA6 2 PRO B 428 GLY B 430 -1 O LEU B 429 N TYR B 420 CISPEP 1 PHE A 89 PRO A 90 0 -1.00 CISPEP 2 PHE B 89 PRO B 90 0 -4.49 CRYST1 167.008 167.008 243.266 90.00 90.00 120.00 P 62 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005988 0.003457 0.000000 0.00000 SCALE2 0.000000 0.006914 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004111 0.00000